TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000009_1.0 # Protein # Glutathione peroxidase 6 (GPx6) # Homo sapiens # Complete (221 letters) Database: bd_sojae 5578 sequences; 78,051,097 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|113926249|gb|AAQY01000499.1| Phytophthora sojae strain P6497 ... 100 2e-21 gi|113926650|gb|AAQY01000098.1| Phytophthora sojae strain P6497 ... 98 1e-20 gi|113926248|gb|AAQY01000500.1| Phytophthora sojae strain P6497 ... 96 5e-20 gi|113926199|gb|AAQY01000549.1| Phytophthora sojae strain P6497 ... 65 1e-10 gi|113925586|gb|AAQY01001162.1| Phytophthora sojae strain P6497 ... 60 4e-09 >gi|113926249|gb|AAQY01000499.1| Phytophthora sojae strain P6497 Psojae_Cont499, whole genome shotgun sequence Length = 73962 Score = 100 bits (248), Expect = 2e-21 Identities = 65/178 (36%), Positives = 92/178 (51%), Gaps = 1/178 (0%) Frame = -1 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE ++ +E + +++ GK VL VNV++ GL YPEL L E+ + G++VL Sbjct: 57297 SFYELKDFDMDKKE-VSMEEYKGKVVLVVNVSSKCGLTPTNYPELQQLYEKYQEEGLVVL 57121 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 FPCNQF QEPGT+ EI+ +K + SF LFEK DVNG + +FT+LK P Sbjct: 57120 GFPCNQFKSQEPGTHEEIIEFVKQ------YNVSFPLFEKHDVNGSNARPIFTYLKAKLP 56959 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYL 215 T + I+WNF KFLV +G P + + + DI E L Sbjct: 56958 GTFG---------------NYIKWNFTKFLVDRNGQPFKRYAPTDLPLSFEEDIKELL 56830 Score = 95.9 bits (237), Expect = 5e-20 Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%) Frame = +3 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE + G E + ++ GK VL VNV++ GL YPEL L + K+ G+ VL Sbjct: 71550 SFYELKDFDMAGNE-VSMAKYKGKVVLAVNVSSKCGLTPTNYPELQELYAKYKDEGLEVL 71726 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 AFPCNQF QEPGT+ EI+ +K + +F FEK DVNG + VFT+LK P Sbjct: 71727 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 71888 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 GS ++WNF KFLV +G P + + + + DI L Q Sbjct: 71889 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEDIKTLLAQ 72023 Score = 42.7 bits (99), Expect = 5e-04 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 2/181 (1%) Frame = +1 Query: 37 TGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAA--YUGLAAQYPELNALQEELKNFGV 94 T ++Y NG+ + + G L VNV + A Q EL L ++ ++ G+ Sbjct: 39538 TASLYSLRDTDANGKPFC-LSELRGHVALLVNVTSGSCNTNAEQLLELADLSKKYEDAGL 39714 Query: 95 IVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN 154 V+AFP QFG E + E++ + + F F + DVNG + F K Sbjct: 39715 KVVAFPSAQFGDAEFDNDEELVEHFQEL-----FGVRFPVLTTRDVNGPNARDALLFCKT 39879 Query: 155 SCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEY 214 P + S++ F I NF KFLV +G V + ++++DI E Sbjct: 39880 RVPGAA---RSAANAF--------IENNFVKFLVDREGRLVKRFGPNDLPLSMETDIQEL 40026 Query: 215 L 215 L Sbjct: 40027 L 40029 >gi|113926650|gb|AAQY01000098.1| Phytophthora sojae strain P6497 Psojae_Cont98, whole genome shotgun sequence Length = 137971 Score = 97.8 bits (242), Expect = 1e-20 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 13/174 (7%) Frame = +1 Query: 25 PQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELN 83 P + G + + + +L G ++I+ FAGK +L VNVA++ + Y +LN Sbjct: 126076 PDRARASSAAGRRKSAHNFSFRSLTGSKFIRLADFAGKPILVVNVASHCNSTTKAYVQLN 126255 Query: 84 ALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGE 143 L + ++++ PCNQFG QE EI L+++ PG GF P+F L EK +VNG Sbjct: 126256 DLAKRFPE--LVIIGCPCNQFGHQENLNGEEIYQSLRHIRPGKGFEPAFMLTEKVEVNGA 126429 Query: 144 KEQKVFTFLKNSCPPTSD--LLGSSS----------QLFWEPMKVHDIRWNFEK 185 +F FL+ + P D LL S +L W P+ D+ WNFEK Sbjct: 126430 NAHALFNFLRITLPYPCDRTLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEK 126591 >gi|113926248|gb|AAQY01000500.1| Phytophthora sojae strain P6497 Psojae_Cont500, whole genome shotgun sequence Length = 93234 Score = 95.9 bits (237), Expect = 5e-20 Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%) Frame = +3 Query: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVL 97 + YE + G E + ++ GK VL VNV++ GL YPEL L + K+ G+ VL Sbjct: 6762 SFYELKDFDMAGNE-VSMAKYKGKVVLAVNVSSKCGLTPTNYPELQELYAKYKDEGLEVL 6938 Query: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157 AFPCNQF QEPGT+ EI+ +K + +F FEK DVNG + VFT+LK P Sbjct: 6939 AFPCNQFAGQEPGTHEEIMEFVKQ------YNVTFPFFEKHDVNGATARPVFTYLKTKLP 7100 Query: 158 PTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217 GS ++WNF KFLV +G P + + + + DI L Q Sbjct: 7101 ------GSFGDF---------VKWNFTKFLVDRNGQPYKRFAPKDRPLSFEEDIKTLLAQ 7235 >gi|113926199|gb|AAQY01000549.1| Phytophthora sojae strain P6497 Psojae_Cont549, whole genome shotgun sequence Length = 157963 Score = 64.7 bits (156), Expect = 1e-10 Identities = 42/107 (39%), Positives = 53/107 (49%) Frame = -3 Query: 82 LNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVN 141 L L E+ + G +VL FPCNQFG QEPGT I LK+ + +F LF K DVN Sbjct: 23660 LQELYEKYHDEGFMVLGFPCNQFGGQEPGTAEGI---LKFT--QEKYHVTFPLFTKVDVN 23496 Query: 142 GEKEQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLV 188 G+ +F FLK + +DI+WNF KFLV Sbjct: 23495 GDNAHPLFKFLKQQL---------------DGFITNDIKWNFTKFLV 23400 >gi|113925586|gb|AAQY01001162.1| Phytophthora sojae strain P6497 Psojae_Cont1162, whole genome shotgun sequence Length = 203904 Score = 59.7 bits (143), Expect = 4e-09 Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Frame = +1 Query: 59 FAGKHVLFVNVAAYUGLAAQYPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLG 118 F K L VN A+ +AQ +L L E+ + G++V+A P N F QEPG NSEIL Sbjct: 77152 FRFKAALVVNTASKCSHSAQLKQLQQLHEKYSDLGLVVVAVPSNDFAGQEPGDNSEIL-- 77325 Query: 119 LKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN----SCPPTSDLLGSSSQLFWEPM 174 +Y + F +F + EK V G+K F + + S PT Sbjct: 77326 ERY----AAFGATFAIAEKTPVTGDKAHPFFKKIADKYSASVAPT--------------- 77448 Query: 175 KVHDIRWNFEKFLVGPDG 192 WNF+KFLV G Sbjct: 77449 ------WNFDKFLVDHRG 77484 Database: bd_sojae Posted date: Feb 23, 2010 5:58 PM Number of letters in database: 78,051,097 Number of sequences in database: 5578 Lambda K H 0.322 0.139 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,031,370 Number of Sequences: 5578 Number of extensions: 282608 Number of successful extensions: 1018 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 260 Number of HSP's successfully gapped in prelim test: 49 Number of HSP's that attempted gapping in prelim test: 665 Number of HSP's gapped (non-prelim): 503 length of query: 221 length of database: 26,017,032 effective HSP length: 102 effective length of query: 119 effective length of database: 25,448,076 effective search space: 3028321044 effective search space used: 3028321044 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.5 bits)