T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=89
*
 BAD AVG GOOD
*
SPP00000004_1.0   :  90
SPP00000005_1.0   :  91
SPP00000006_1.0   :  89
SPP00000007_1.0   :  86
SPP00000008_1.0   :  89
SPP00000009_1.0   :  89
SPP00000010_1.0   :  89
SPP00000011_1.0   :  88
gi|113920845|gb   :  87
gi|113920737|gb   :  91
cons              :  89

SPP00000004_1.0   MCAARLA-------------------A------------------
SPP00000005_1.0   MA-------------------------------------------
SPP00000006_1.0   MARLLQA-------------------SCL---LSLLLA-GFVSQS
SPP00000007_1.0   MSLGRLC------------RLLKPALLCGALAAPGLAGTMCAS--
SPP00000008_1.0   MTTQLRV-------------------VHL---LPLLLA-CFVQTS
SPP00000009_1.0   MFQQFQA-------------------SCL---VLFFLV-GFAQQT
SPP00000010_1.0   MVAATVA-------------------AAW---LLLWAA--A----
SPP00000011_1.0   MEPLAAYPLKCSGPRAKVFAVLLSIVLCTVTLFLLQLK--F----
gi|113920845|gb   LALCG--------------------------------A-------
gi|113920737|gb   ---------------------------------------------

cons                                                           


SPP00000004_1.0   ----------AAAAAQSVYAFSARPLAGGEPVSLGSLRG-KVLLI
SPP00000005_1.0   ------------FIAKSFYDLSAISLDG-EKVDFNTFRG-RAVLI
SPP00000006_1.0   RGQEKSKMDCHGGISGTIYEYGALTIDGEEYIPFKQYAG-KYVLF
SPP00000007_1.0   ----RD----DWRCARSMHEFSAKDIDG-HMVNLDKYRG-FVCIV
SPP00000008_1.0   PKQEKMKMDCHKDEKGTIYDYEAIALNKNEYVSFKQYVG-KHILF
SPP00000009_1.0   LKPQNRKVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAG-KHVLF
SPP00000010_1.0   ----------CAQQEQDFYDFKAVNIRG-KLVSLEKYRG-SVSLV
SPP00000011_1.0   ----------LKPKINSFYAFEVKDAKG-RTVSLEKYKG-KVSLV
gi|113920845|gb   ---------CNAAEYTSFLDFTVPDLQG-REVSMREFSAFPVILV
gi|113920737|gb   --------------AKTFYELKDFDMDK-KEVSMEEYKG-KVVLV

cons                               .           . : :    .    :.


SPP00000004_1.0   ENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENA
SPP00000005_1.0   ENVASLXGTTTRDFTQLNELQCRF-PRRLVVLGFPCNQFGHQENC
SPP00000006_1.0   VNVASYXGLTG-QYIELNALQEELAPFGLVILGFPCNQFGKQEPG
SPP00000007_1.0   TNVASQXGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPG
SPP00000008_1.0   VNVATYXGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPG
SPP00000009_1.0   VNVAAYXGLAA-QYPELNALQEELKNFGVIVLAFPCNQFGKQEPG
SPP00000010_1.0   VNVASEXGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPD
SPP00000011_1.0   VNVASDXQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPR
gi|113920845|gb   VNVASDCGYTDKNYRELQDLYEKYHDEGFTVLGFPCNQFGAQEPG
gi|113920737|gb   VNVSSKCGLTPTNYPELQQLYEKYQEEGLVVLAFPCNQFKSQEPG

cons               **::    :  .:  :  *        . :*.******  .*  


SPP00000004_1.0   KNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA
SPP00000005_1.0   QNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYLKDK
SPP00000006_1.0   ENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNS
SPP00000007_1.0   SNEEIKEFA------AGYNVKFDMFSKICVNGDDAHPLWKWMKIQ
SPP00000008_1.0   DNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHS
SPP00000009_1.0   TNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNS
SPP00000010_1.0   SNKEIESFAR-----RTYSVSFPMFSKIAVTGTGAHPAFKYLAQT
SPP00000011_1.0   PSKEVESFAR-----KNYGVTFPIFHKIKILGSEGEPAFRFLVDS
gi|113920845|gb   TAEEILKFTR-----EKYHVTFPLFTK------------------
gi|113920737|gb   THEEILEFVK-------YNVTFPFFEKHDVNGSNARPVFTYLKAK

cons                .*:            :  .* :. *                  


SPP00000004_1.0   LPAPSDDATALMTDPKLI--TWSPVCRNDVAWNFEKFLVGPDGVP
SPP00000005_1.0   LPYPYDDPFSLMTDPKLI--IWSPVRRSDVAWNFEKFLIGPEGEP
SPP00000006_1.0   CPPTSE----LLGTSDRL--FWEPMKVHDIRWNFEKFLVGPDGIP
SPP00000007_1.0   P-KGKG----I--------------LGNAIKWNFTKFLIDKNGCV
SPP00000008_1.0   CPHPSE----ILGTFKSI--SWDPVKVHDIRWNFEKFLVGPDGIP
SPP00000009_1.0   CPPTSD----LLGSSSQL--FWEPMKVHDIRWNFEKFLVGPDGVP
SPP00000010_1.0   S-------------------------GKEPTWNFWKYLVAPDGKV
SPP00000011_1.0   S-------------------------KKEPRWNFWKYLVNPEGQV
gi|113920845|gb   ---------------------------------------------
gi|113920737|gb   LPGSFGEA--LLFCKTQLTGATESAANSFIEDNFVKFLVGRDGRP

cons                                                           


SPP00000004_1.0   LRRYSRRFQTIDIEPDIEALLSQG----PSCA
SPP00000005_1.0   FRRYSRTFPTINIEPDIKRLLKV-------AI
SPP00000006_1.0   IMRWHHRTTVSNVKMDILSYMRRQAALGVKRK
SPP00000007_1.0   VKRYGPMEEPLVIEKDLPHY-----------F
SPP00000008_1.0   VMRWSHRATVSSVKTDILAYLKQF-----KTK
SPP00000009_1.0   VMHWFHQAPVSTVKSDILEYLKQF-----NTH
SPP00000010_1.0   VGAWDPTVSVEEVRPQITALVRKLILLKREDL
SPP00000011_1.0   VKFWKPEEPIEVIRPDIAALVRQVIIKKKEDL
gi|113920845|gb   -------------------------------V
gi|113920737|gb   VKRYGPYAMPSSLETDIQRLL----------K

cons