TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000010_1.0 # Protein # Glutathione peroxidase 7 (GPx7) #
Homo sapiens # Complete
         (187 letters)

Database: bd_annulata 
           8 sequences; 8,358,125 total letters

Searching........done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|65301918|emb|CR940348.1| Theileria annulata strain Ankara iso...    27   3.2  
gi|71533066|emb|CR940352.2| Theileria annulata strain Ankara iso...    25   9.3  

>gi|65301918|emb|CR940348.1| Theileria annulata strain Ankara isolate
             clone C9, *** SEQUENCING IN PROGRESS ***
          Length = 1979170

 Score = 26.6 bits (57), Expect = 3.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 79    FNVLAFPCNQFGQQEPDSNKEIESFARRTYS 109
             FN++   C +FG+  P  N EI +F +R  S
Sbjct: 89219 FNLIKISCGRFGKSNP--NVEISTFDKRLLS 89305


>gi|71533066|emb|CR940352.2| Theileria annulata strain Ankara isolate
              clone C9, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces
          Length = 1898942

 Score = 25.0 bits (53), Expect = 9.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 71     QRDLGPHHFNVLAFPCNQFGQQEPDSNKEIES 102
              QR +  H F+ L F   +FG  +P+  KE  S
Sbjct: 407027 QRTVHAHFFSELYFLTGRFGNPKPNFEKEHSS 406932


  Database: bd_annulata
    Posted date:  Feb 25, 2010 11:01 AM
  Number of letters in database: 8,358,125
  Number of sequences in database:  8
  
Lambda     K      H
   0.324    0.135    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,624,864
Number of Sequences: 8
Number of extensions: 18942
Number of successful extensions: 81
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 75
Number of HSP's gapped (non-prelim): 15
length of query: 187
length of database: 2,786,041
effective HSP length: 85
effective length of query: 102
effective length of database: 2,785,361
effective search space: 284106822
effective search space used: 284106822
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (25.0 bits)