TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000005_1.0 # Protein # Glutathione peroxidase 2 (GPx2) #
Homo sapiens # Complete
         (190 letters)

Database: bd_annulata 
           8 sequences; 8,358,125 total letters

Searching........done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|65303699|emb|CR940353.1| Theileria annulata strain Ankara iso...    28   1.1  
gi|71533066|emb|CR940352.2| Theileria annulata strain Ankara iso...    28   1.5  
gi|65304547|emb|CR940347.1| Theileria annulata strain Ankara iso...    27   1.9  
gi|65301918|emb|CR940348.1| Theileria annulata strain Ankara iso...    25   7.3  

>gi|65303699|emb|CR940353.1| Theileria annulata strain Ankara isolate
              clone C9, *** SEQUENCING IN PROGRESS ***
          Length = 1842271

 Score = 28.1 bits (61), Expect = 1.1
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +3

Query: 165    PFRRYSRTFPTINIEP 180
              PF++ S +FPT+N+EP
Sbjct: 550401 PFKKSSTSFPTVNVEP 550448



 Score = 25.8 bits (55), Expect = 5.6
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 77     CQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFA 117
              C +E+ILN +  V   G        V   ++NG  E P+ A
Sbjct: 227556 CISEKILNEIAVVTKTGESSNNIERVSTNDINGSKEAPIRA 227434


>gi|71533066|emb|CR940352.2| Theileria annulata strain Ankara isolate clone
               C9, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces
          Length = 1898942

 Score = 27.7 bits (60), Expect = 1.5
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 59      RRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQ-NEHPVFA 117
               R L +  FP N+   ++   N+ I  +LKY+   GGY      ++  EV G  +   ++ 
Sbjct: 1703084 RSLSIDYFPINRLSSRKKDYNQ-ITGTLKYLTQAGGYFKFMNHLRNLEVKGTFDPEDMYK 1703260

Query: 118     YLKD 121
               YL +
Sbjct: 1703261 YLDE 1703272



 Score = 26.6 bits (57), Expect = 3.3
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +2

Query: 58      PRRLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKC-EVNGQNEHPVF 116
               P +L +  F  N+F       NEEI+N LK     G       L +KC E+   N   VF
Sbjct: 1085765 PYQLNIEEFNINEFN------NEEIINKLKNFNEFGNLNEFVNLDKKCLEIKLFNVSTVF 1085926

Query: 117     AYLKDKL 123
                  K+ L
Sbjct: 1085927 KIGKNSL 1085947



 Score = 25.8 bits (55), Expect = 5.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 146    RRSDVAWNFEKFLIGPEGEP 165
              R+ D+AWN EK L+ P+  P
Sbjct: 509177 RKRDIAWNKEKHLLKPKK*P 509118


>gi|65304547|emb|CR940347.1| Theileria annulata strain Ankara isolate
              clone C9, *** SEQUENCING IN PROGRESS ***
          Length = 2592520

 Score = 27.3 bits (59), Expect = 1.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 110    QNEHPVFAYLKDKLPYPYDDPFSLM 134
              +N+ P   YL+ K  YPY  P SLM
Sbjct: 151654 RNQQPSHIYLRTKPLYPYQIPSSLM 151728



 Score = 27.3 bits (59), Expect = 1.9
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 8/40 (20%)
 Frame = +1

Query: 127     YDDPFSLMTDPKLIIWSPVR--------RSDVAWNFEKFL 158
               Y D F+L  + KLI++SP+         +SD+  N+ +FL
Sbjct: 2353510 YIDVFTLRKELKLILYSPIHKDSPYYRFKSDLVQNYNQFL 2353629



 Score = 26.2 bits (56), Expect = 4.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 146     RRSDVAWNFEKFLIGPEGEP 165
               R+ D+AWN EK L+ P+  P
Sbjct: 1218033 RKKDIAWNKEKHLLKPKK*P 1218092



 Score = 25.4 bits (54), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 49      QLNELQCRFPRRLVVLGFP 67
               +++E+ C FPR +V  GFP
Sbjct: 1407463 RVDEISCSFPRDIVSHGFP 1407407


>gi|65301918|emb|CR940348.1| Theileria annulata strain Ankara isolate clone
               C9, *** SEQUENCING IN PROGRESS ***
          Length = 1979170

 Score = 25.4 bits (54), Expect = 7.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 64      LGFPCNQFGHQEN 76
               LGFPC+ FG  EN
Sbjct: 1339693 LGFPCSVFGEDEN 1339731


  Database: bd_annulata
    Posted date:  Feb 25, 2010 11:01 AM
  Number of letters in database: 8,358,125
  Number of sequences in database:  8
  
Lambda     K      H
   0.323    0.141    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,775,474
Number of Sequences: 8
Number of extensions: 26745
Number of successful extensions: 112
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 84
length of query: 190
length of database: 2,786,041
effective HSP length: 85
effective length of query: 105
effective length of database: 2,785,361
effective search space: 292462905
effective search space used: 292462905
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)