TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_Gasterosteus_aculeatus received from V.Shchedrina 
         (310 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

 ***** No hits found ******


TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_salmo_salar received from V.Shchedrina 
         (307 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0005189                                                         34   0.15 
Contig_0008081                                                         31   1.3  
Contig_0011051                                                         30   3.8  

>Contig_0005189
          Length = 7941

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -1

Query: 218  IYKAFGLGSSYSNVMNFDSLLQYAEYVVLGQEFPD 252
            + KA G    YS++  +DS+L+YA  VV+  +FPD
Sbjct: 3039 VAKAVGFSKFYSSLHCYDSVLKYATVVVVTSDFPD 2935



TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_Oncorhynchus_mykiss received from V.Shchedrina 
         (307 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0005189                                                         34   0.15 
Contig_0008081                                                         31   1.7  
Contig_0011051                                                         30   3.8  

>Contig_0005189
          Length = 7941

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -1

Query: 218  IYKAFGLGSSYSNVMNFDSLLQYAEYVVLGQEFPD 252
            + KA G    YS++  +DS+L+YA  VV+  +FPD
Sbjct: 3039 VAKAVGFSKFYSSLHCYDSVLKYATVVVVTSDFPD 2935


TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_danio_rerio received from V.Shchedrina 
         (302 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0011542                                                         29   6.3  
Contig_0004670                                                         28   8.2  



TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_Squalus_acanthias received from V.Shchedrina 
         (298 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0007680                                                         28   8.1  



TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_fugu received from V.Shchedrina 
         (298 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0003306                                                         29   4.7  


BLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_Tetraodon_nigroviridis received from V.Shchedrina 
         (296 letters)U

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0000622                                                         31   1.6  
Contig_0013261                                                         29   6.1  
Contig_0014177                                                         28   8.0  



TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_ciona_intestinalis received from V.Shchedrina 
         (303 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

 ***** No hits found ******



TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL_Molgula_tectiformis received from V.Shchedrina 
         (296 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0007856                                                         30   2.8  
Contig_0014425                                                         29   4.7  
Contig_0004153                                                         29   4.7  
Contig_0002237                                                         29   6.1  
Contig_0011345                                                         28   8.0  



TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SelL.Monosiga_brevicollis.1 located on scaffold_4 strand +
positions 227027,227464 # obtained by tblastn
         (146 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0005553                                                         29   1.7  
Contig_0009164                                                         28   2.9  
Contig_0005704                                                         28   2.9  
Contig_0004990                                                         27   6.5  

