TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000015_1.0 # Protein # Selenoprotein I (SelI) # Homo
sapiens # Complete
         (397 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0001646                                                         87   2e-17
Contig_0001371                                                         35   0.17 
Contig_0007748                                                         33   0.64 
Contig_0000061                                                         32   1.1  
Contig_0013649                                                         30   5.4  
Contig_0009151                                                         29   7.0  
Contig_0003408                                                         29   7.0  

>Contig_0001646
          Length = 4063

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 46/124 (37%), Positives = 66/124 (53%)
 Frame = +2

Query: 6    YVSPEQLAGFDKYKYSAVDTNPLSLYVMHPFWNTIVKVFPTWLAPNLITFSGFLLVVFNF 65
            Y+ P  L     YKYS+    PL   VM+P+W  +  + P  + PN++T  GFL  +   
Sbjct: 2090 YIPPLGLKNLHSYKYSSGGYTPLDK-VMNPWWEFVASLVPATVHPNVLTVLGFLCAIGAS 2266

Query: 66   LLMAYFDPDFYASAPGHKHVPDWVWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFD 125
            +L   +      S    +  P WV++ V  L F+  T D +DGK ARR + S+PLG+LFD
Sbjct: 2267 ILQLTY------SVTLSEEAPRWVYLAVAFLFFLYQTFDAIDGKHARRNSLSSPLGQLFD 2428

Query: 126  HGLD 129
            HG D
Sbjct: 2429 HGCD 2440


>Contig_0001371
          Length = 3314

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
 Frame = -1

Query: 108  GKQARRTNSSTPLGELFDHGLDSWSCVYFVVTVYSIFG-----RGSTGVSVFVLYLLLWV 162
            G+   + ++  P   LF      W  + F V +  +F      R S   SV    LL ++
Sbjct: 2210 GRTPTKGHTLCPFSFLFSFLFSIWLPLLFSVVISFLFSSLISFRFSFLFSVLFSILLPFL 2031

Query: 163  V------LFSFILSHWEKYNTGILF---LPWGYDISQVTISFVYIVTAVVGVEAWYEPFL 213
            V      LFSF+ S W  +    LF   LP+   +  V ISF++       + ++   FL
Sbjct: 2030 VSLVISVLFSFLFSFWFSFLFSFLFSFTLPF---LFSVVISFLFSF-----LFSFLFSFL 1875

Query: 214  FNFLYRDLFTAMI 226
            F+FL+  LF+ +I
Sbjct: 1874 FSFLFSFLFSLLI 1836


>Contig_0007748
          Length = 1933

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
 Frame = +3

Query: 235 LPMSLLNFFRSYKNNTLKLN----SVYEAMVPLFS--PCLLFILSTAWILWSPSDILELH 288
           L +S L+ F S  + +L L+    +++ ++VPL S  P L   LS       PS  L L 
Sbjct: 3   LSLSSLSLFLSLSSLSLFLSLSRPALFLSLVPLSSSRPALFSSLSR------PSLFLSLS 164

Query: 289 PRVFYFMVGTAFANSTCQLIVCQMSSTRCPTLNWLLVPLFLVVLVVNLGVASYVESILLY 348
            R     +    ++ +   +   +SS   P    L +PLFLV L V L ++  +  +L  
Sbjct: 165 SRSLPLSLVPLSSSLSRPALFLSLSSRSLP----LSLPLFLVSLSVRLSLSFVLCCVLSN 332

Query: 349 TLTTAFTLAH 358
           +LT   T+AH
Sbjct: 333 SLTLQRTVAH 362



Query= SPP00000111_1.0 # Protein # Selenoprotein I (SelI) # Mus
musculus # Complete
         (402 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0001646                                                         81   2e-15
Contig_0001371                                                         32   0.84 
Contig_0006978                                                         31   2.5  
Contig_0000061                                                         30   3.2  
Contig_0003782                                                         30   4.2  
Contig_0006831                                                         29   9.3  

>Contig_0001646
          Length = 4063

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
 Frame = +2

Query: 6    YVSPEQLSGFDKYKYSALDTNPLSLYIMHPFWNTIVKKKKQVFPTWLAPNLITFSGFMLL 65
            Y+ P  L     YKYS+    PL   +M+P+W  +      + P  + PN++T  GF+  
Sbjct: 2090 YIPPLGLKNLHSYKYSSGGYTPLDK-VMNPWWEFVAS----LVPATVHPNVLTVLGFLCA 2254

Query: 66   V-FNFLLLTYFDPDFYASAPGHKHVPDWVWIVVGILNFAAYTLDGVDGKQARRTNSSTPL 124
            +  + L LTY       S    +  P WV++ V  L F   T D +DGK ARR + S+PL
Sbjct: 2255 IGASILQLTY-------SVTLSEEAPRWVYLAVAFLFFLYQTFDAIDGKHARRNSLSSPL 2413

Query: 125  GELFDHGLD 133
            G+LFDHG D
Sbjct: 2414 GQLFDHGCD 2440


>Contig_0001371
          Length = 3314

 Score = 32.3 bits (72), Expect = 0.84
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
 Frame = -1

Query: 112  GKQARRTNSSTPLGELFDHGLDSWSCVYFVVTVYSIFG-----RGPTGVSVFVLYLLLWV 166
            G+   + ++  P   LF      W  + F V +  +F      R     SV    LL ++
Sbjct: 2210 GRTPTKGHTLCPFSFLFSFLFSIWLPLLFSVVISFLFSSLISFRFSFLFSVLFSILLPFL 2031

Query: 167  V------LFSFILSHWEKYNTGVLF---LPWGYDISQVTISFVYIVTAVVGVEAWYEPFL 217
            V      LFSF+ S W  +    LF   LP+   +  V ISF++       + ++   FL
Sbjct: 2030 VSLVISVLFSFLFSFWFSFLFSFLFSFTLPF---LFSVVISFLFSF-----LFSFLFSFL 1875

Query: 218  FNFLYRDLFTAMI 230
            F+FL+  LF+ +I
Sbjct: 1874 FSFLFSFLFSLLI 1836



Query= # SelI # Phitofora infesta 1 # Complete
         (457 letters)

Database: caninum.fa 
           14,463 sequences; 46,187,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig_0001646                                                         97   3e-20
Contig_0000061                                                         35   0.20 
Contig_0008953                                                         33   0.45 
Contig_0007495                                                         33   0.76 
Contig_0007028                                                         30   4.9  
Contig_0004228                                                         30   4.9  
Contig_0009957                                                         30   6.5  
Contig_0003648                                                         30   6.5  
Contig_0007233                                                         25   8.3  

>Contig_0001646
          Length = 4063

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 49/139 (35%), Positives = 75/139 (53%)
 Frame = +2

Query: 37   FGKYVSQEGSEKLRTYEYHGADNSLVYKVLTPMNNFLVKLLPLWLAPNLITLIGLILVGG 96
            FG Y+   G + L +Y+Y     + + KV+ P   F+  L+P  + PN++T++G +   G
Sbjct: 2081 FGHYIPPLGLKNLHSYKYSSGGYTPLDKVMNPWWEFVASLVPATVHPNVLTVLGFLCAIG 2260

Query: 97   SHTLFVFLCPFLVGDAPWWAMVVAALALFTYQTLDNLDGKQARRTKSSSPLGLLFDHGCV 156
            +  L +     L  +AP W  +  A   F YQT D +DGK ARR   SSPLG LFDHGC 
Sbjct: 2261 ASILQLTYSVTLSEEAPRWVYLAVAFLFFLYQTFDAIDGKHARRNSLSSPLGQLFDHGCD 2440

Query: 157  ALNVSVGTMTMASILQMGT 175
             +  +  T+   +++  GT
Sbjct: 2441 IILATPLTLVSIAVITAGT 2497


>Contig_0000061
          Length = 1797

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = -3

Query: 37   FGKYVSQEGSEKLRTYEYHGADNSLVYKVLTPMNNFLVKLLPL 79
            FG ++++EG E+LR YEY    ++ + +++ P   ++   LPL
Sbjct: 1327 FGCFITREGLEELRGYEYKACGSTPIDRLMNPWWEYVADKLPL 1199



 Score = 34.3 bits (77), Expect = 0.26
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = -3

Query: 80  WLAPNLITLIGLILVGGSHTLFVFLCPFLVGDAPWWAMVVAALALFTYQ 128
           WL+PNL+T++G         L +   P L   AP W  +   L LF YQ
Sbjct: 967 WLSPNLLTVLGFGCTLLCMLLVMTWMPHLDEAAPRWVYLAMCLLLFVYQ 821


>Contig_0008953
          Length = 5337

 Score = 33.5 bits (75), Expect = 0.45
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = -2

Query: 111 DAPWWAMVVAALALFTYQTLDNLDGKQAR 139
           D P+WA  VA L    Y  LDN+DGKQ R
Sbjct: 131 DTPFWA--VAGLLWMLYSVLDNVDGKQVR 51


>Contig_0007495
          Length = 4273

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 33/113 (29%), Positives = 46/113 (40%)
 Frame = -3

Query: 72  FLVKLLPLWLAPNLITLIGLILVGGSHTLFVFLCPFLVGDAPWWAMVVAALALFTYQTLD 131
           FL   LPLWL+  L+      L+  + +LF   C F+      W+   +  ALF      
Sbjct: 689 FLPLSLPLWLSTLLLCTSSAFLLSSAASLFTVSC-FVSRLRRVWSGAASVSALF------ 531

Query: 132 NLDGKQARRTKSSSPLGLLFDHGCVALNVSVGTMTMASILQMGTTWRTLGFVL 184
            L  KQ RR   S     LF   C  +  S+  +  A ++       TLGF L
Sbjct: 530 QLSEKQLRRKSRSICAWCLF---CSLVCSSLSLLASAFLIPPLEGKSTLGFTL 381



