TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000018_1.0 # Protein # Selenoprotein N (SelN) # Homo
sapiens # Complete
         (590 letters)

Database: berghei.fa 
           5966 sequences; 17,086,925 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56485604|emb|CAAI01005937.1| UNBERG.2.14004, whole genome sho...    32   0.51 
gi|56486152|emb|CAAI01003834.1| Plasmodium berghei whole genome ...    29   4.3  
gi|56492448|emb|CAAI01004994.1| UNBERG.2.30751, whole genome sho...    28   7.3  
gi|56500476|emb|CAAI01006683.1| Plasmodium berghei whole genome ...    28   7.3  

>gi|56485604|emb|CAAI01005937.1| UNBERG.2.14004, whole genome
           shotgun sequence
          Length = 754

 Score = 32.3 bits (72), Expect = 0.51
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +1

Query: 4   ARPGQRGPPSPGPAAQPPAPPR 25
           A PG  G P+P P A PP PPR
Sbjct: 187 AAPGAGGAPAPRPPAPPPPPPR 252




TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157389007|ref|NP_001004294.3| selenoprotein N, 1 [Danio
rerio]
         (557 letters)

Database: berghei.fa 
           5966 sequences; 17,086,925 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56492976|emb|CAAI01005105.1| UNBERG.2.28613, whole genome sho...    29   5.3  
gi|56493932|emb|CAAI01005131.1| UNBERG.2.30306, whole genome sho...    29   5.3  
gi|56495932|emb|CAAI01000308.1| Plasmodium berghei whole genome ...    28   6.9  

>gi|56492976|emb|CAAI01005105.1| UNBERG.2.28613, whole genome shotgun
            sequence
          Length = 2200

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 32   FTHISSLFIIAAIPVIGFCIKYCLDI 57
            F +I +L II A+P+I +C+ Y L I
Sbjct: 1992 FKNIKNLIIIKAVPIIKYCLHYQLII 2069


>gi|56493932|emb|CAAI01005131.1| UNBERG.2.30306, whole genome shotgun
            sequence
          Length = 2651

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 32   FTHISSLFIIAAIPVIGFCIKYCLDI 57
            F +I +L II A+P+I +C+ Y L I
Sbjct: 2198 FKNIKNLIIIKAVPIIKYCLHYQLII 2275




TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000114_1.0 # Protein # Selenoprotein N (SelN) # Mus
musculus # Complete
         (557 letters)

Database: berghei.fa 
           5966 sequences; 17,086,925 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56486152|emb|CAAI01003834.1| Plasmodium berghei whole genome ...    28   6.9  
gi|56501390|emb|CAAI01002306.1| Plasmodium berghei whole genome ...    28   9.0  

