TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000015_1.0 # Protein # Selenoprotein I (SelI) # Homo
sapiens # Complete
         (397 letters)

Database: intestinalis.fa 
           306 sequences; 11,192,215 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157432259|gb|AACB02000063.1| Giardia lamblia ATCC 50803 strai...    33   0.13 
gi|157436545|gb|AACB02000007.1| Giardia lamblia ATCC 50803 strai...    33   0.17 
gi|157433596|gb|AACB02000033.1| Giardia lamblia ATCC 50803 strai...    32   0.23 
gi|157435085|gb|AACB02000017.1| Giardia lamblia ATCC 50803 strai...    32   0.23 
gi|157434251|gb|AACB02000025.1| Giardia lamblia ATCC 50803 strai...    28   3.3  

>gi|157432259|gb|AACB02000063.1| Giardia lamblia ATCC 50803 strain WB C6
             ctg02_63, whole genome shotgun sequence
          Length = 45121

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +2

Query: 242   FFRSYKNNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMVGTAFA 301
             + R +  N L+  ++Y  +   F  C LFIL +  IL   +   +L   VFYF+V    A
Sbjct: 16805 YLRIFLGNRLRNIAIYITL*RTFELCYLFILGSIQILQLSNGSAQLFYLVFYFLVDICGA 16984

Query: 302   NS 303
              S
Sbjct: 16985 GS 16990


>gi|157436545|gb|AACB02000007.1| Giardia lamblia ATCC 50803 strain WB C6
              ctg02_7, whole genome shotgun sequence
          Length = 283910

 Score = 32.7 bits (73), Expect = 0.17
 Identities = 30/101 (29%), Positives = 42/101 (41%)
 Frame = +2

Query: 289    PRVFYFMVGTAFANSTCQLIVCQMSSTRCPTLNWLLVPLFLVVLVVNLGVASYVESILLY 348
              P VFY   G A AN     +   +SS+           +F V L    G  S ++SILLY
Sbjct: 217436 PSVFYMECGPAIAN-----LYDGLSSSS----------VFSVFLKPQYGQWSMLDSILLY 217570

Query: 349    TLTTAFTLAHIHYGVRVVKQLSSHFQIYPFSLRKPNSDULG 389
              TL T+    H H+     +++      YP   R  +   LG
Sbjct: 217571 TLITSVMHIHPHHIAYNYRRIFCTISFYPRISRHNSVARLG 217693


>gi|157433596|gb|AACB02000033.1| Giardia lamblia ATCC 50803 strain WB C6
             ctg02_33, whole genome shotgun sequence
          Length = 96597

 Score = 32.3 bits (72), Expect = 0.23
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = +2

Query: 262   PLFSPCLL-----FILSTAWILWSPSDILELHPRVFYFMVGTAFANSTCQLIVC 310
             P  SPC L      +L++ W  W+P  +  L   V  F VG   +  T  LIVC
Sbjct: 88634 PSSSPCRLEPVCILLLTSTWFQWAPGTLSTLPCAVGMFNVGDTQSALTFSLIVC 88795


>gi|157435085|gb|AACB02000017.1| Giardia lamblia ATCC 50803 strain
           WB C6 ctg02_17, whole genome shotgun sequence
          Length = 203025

 Score = 32.3 bits (72), Expect = 0.23
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = -2

Query: 262 PLFSPCLL-----FILSTAWILWSPSDILELHPRVFYFMVGTAFANSTCQLIVC 310
           P  SPC L      +L++ W  W+P  +  L   V  F VG   +  T  LIVC
Sbjct: 314 PSSSPCRLEPVCILLLTSTWFQWAPGTLSTLPCAVGMFNVGDTQSALTFSLIVC 153



 

Query= SPP00000111_1.0 # Protein # Selenoprotein I (SelI) # Mus
musculus # Complete
         (402 letters)

Database: intestinalis.fa 
           306 sequences; 11,192,215 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157433596|gb|AACB02000033.1| Giardia lamblia ATCC 50803 strai...    32   0.23 
gi|157435085|gb|AACB02000017.1| Giardia lamblia ATCC 50803 strai...    32   0.23 
gi|157434347|gb|AACB02000024.1| Giardia lamblia ATCC 50803 strai...    28   3.3  
gi|157435327|gb|AACB02000015.1| Giardia lamblia ATCC 50803 strai...    28   4.4  
gi|157432909|gb|AACB02000045.1| Giardia lamblia ATCC 50803 strai...    28   5.7  
gi|157433532|gb|AACB02000034.1| Giardia lamblia ATCC 50803 strai...    27   9.7  
gi|157433961|gb|AACB02000028.1| Giardia lamblia ATCC 50803 strai...    27   9.7  

>gi|157433596|gb|AACB02000033.1| Giardia lamblia ATCC 50803 strain WB C6
             ctg02_33, whole genome shotgun sequence
          Length = 96597

 Score = 32.3 bits (72), Expect = 0.23
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = +2

Query: 266   PFFSPCLLFTLC-----TVWILWSPSDILEIHPRIFYFMVGTAFANITCQLIVC 314
             P  SPC L  +C     + W  W+P  +  +   +  F VG   + +T  LIVC
Sbjct: 88634 PSSSPCRLEPVCILLLTSTWFQWAPGTLSTLPCAVGMFNVGDTQSALTFSLIVC 88795


>gi|157435085|gb|AACB02000017.1| Giardia lamblia ATCC 50803 strain
           WB C6 ctg02_17, whole genome shotgun sequence
          Length = 203025

 Score = 32.3 bits (72), Expect = 0.23
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
 Frame = -2

Query: 266 PFFSPCLLFTLC-----TVWILWSPSDILEIHPRIFYFMVGTAFANITCQLIVC 314
           P  SPC L  +C     + W  W+P  +  +   +  F VG   + +T  LIVC
Sbjct: 314 PSSSPCRLEPVCILLLTSTWFQWAPGTLSTLPCAVGMFNVGDTQSALTFSLIVC 153




Query= # SelI # Phitofora infesta 1 # Complete
         (457 letters)

Database: intestinalis.fa 
           306 sequences; 11,192,215 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157435473|gb|AACB02000014.1| Giardia lamblia ATCC 50803 strai...    29   2.3  
gi|157435763|gb|AACB02000012.1| Giardia lamblia ATCC 50803 strai...    28   5.1  
gi|157436545|gb|AACB02000007.1| Giardia lamblia ATCC 50803 strai...    28   6.7  
gi|157437317|gb|AACB02000003.1| Giardia lamblia ATCC 50803 strai...    27   8.8  


