TCOFFEE

# Command Line: t_coffee selH.fa prot.fa  [PROGRAM:T-COFFEE]
# T-COFFEE Memory Usage: Current= 4.664 Mb, Max= 6.755 Mb
# T-COFFEE CPU Usage: 20 millisec
# Results Produced with T-COFFEE (Version_7.54)
# T-COFFEE is available from http://www.tcoffee.org
[u41208.est12.alu.upf@ws101135 ~]$ more tcoffebreviH.fa
CLUSTAL FORMAT for T-COFFEE Version_7.54 [http://www.tcoffee.org] [MODE:  ], CPU=0.02 sec, SCORE=94, Nseq=2, Len=128 

gi|158271075|gb|EDO96902.1|  MAPKRKAAAAAEAPAKKAKAPAKKKEAEKKEETAPVAADAGDGIVIEACKSXGAFKTRAT
scaffold_24                  -----------------------------------------DAVYIEGCKSXGVFKRSAA
                                                                      *.: **.*****.**  *:

gi|158271075|gb|EDO96902.1|  KLEKLIKEGAPGTSVSVNPDKPRKGCFEVRGPGGKTFVSLLDMPRPFTKLKALDVEALAE
scaffold_24                  KLETLVKDQHPDAQIVFNSEKPRRGCFEVTV-NGNVVVSLLEMPRPFKKLREYDLDKAAE
                             ***.*:*:  *.:.: .*.:***:*****   .*:..****:*****.**:  *::  **

gi|158271075|gb|EDO96902.1|  EVLAALKE
scaffold_24                  EIAAKL-K
                             *: * * :


