CLUSTAL FORMAT for T-COFFEE Version_7.54 [http://www.tcoffee.org] [MODE:  ], CPU=0.16 sec, SCORE=98, Nseq=2, Len=488 

TR1                            GFDYDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKL
TR.Thalassiosira_pseudonana.1  -YEYDLLVLGGGSGGLAASKEAAAHGARVAVLDYVKPSPAGSTWGLGGTCVNVGCIPKKL
                                ::**::*:********.***.*  **:*****:**************************

TR1                            MHTASIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRVALREAGITYL
TR.Thalassiosira_pseudonana.1  MHTAALLNYQQKTEEWMGMSQDNADAPHSWGILKNNVQNHIRGLNFKYRVDLREKEVTYL
                               ****:::.   * :      :* * ..*.*  :*..**:**:.******* ***  :***

TR1                            NRLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPGGEHAIDSDDLFSLPKA
TR.Thalassiosira_pseudonana.1  NMLGKFKDAHTVETVDKKGNVGSITASRFLIAVGGRPSPLDCEGGELAISSDDVFSLEND
                               * **:*:* :*:. .*****  *:**:**::******. *.* *** **.***:*** : 

TR1                            PGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGVQLQV
TR.Thalassiosira_pseudonana.1  PGKVLCVGASYISLECAGFLKGIGKDVTVAVRSILLRGFDRECADLIGEHMRHEGIVFKE
                               **:*****..**:***.**  *:*  .*  *************.. *  *::*.*: :: 

TR1                            GVTPAKIEKDAATGVLTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAKT
TR.Thalassiosira_pseudonana.1  EVVPKKLVKTE-GGRIAVTFSNGDVEEYDTVLAAIGRTGDTSKLGLENV---GIDVNPKN
                                *.* *: *    * ::** *.*.*.******.* ** .**: **::**   . :**.*.

TR1                            KKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPMDYECVATT
TR.Thalassiosira_pseudonana.1  AKIPAKLEQT-CTPNIYVIGDVMDGCPELTPVAIHAGKMLSRRLFAGSTAPMDYRNVCTT
                                *: .  **   :*::*.****::* ********.**  *:****.*.* ****. *.**

TR1                            IFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCFAKLVVDKS
TR.Thalassiosira_pseudonana.1  VFTPLEYGTVGYSEDDAIAEFGKENVEVYHKYFIPLEWSLSPSRSESQG--FCKAIVYKA
                               :********:* ***** *::*: *** * . * ***::** :***  .  *.* :* *:

TR1                            TGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSMTVTKSSGES
TR.Thalassiosira_pseudonana.1  TRKVLGLHYLGPNAGEVMQGFGTAMKLGCKFEDITETVGIHPTTAEELTTLSITKASGAD
                               * **:*:*********: ***. **: *..: *: .*******.***:*::::**:** .

TR1                            AAKGGCXG
TR.Thalassiosira_pseudonana.1  AKASGCXG
                               *  .****



