TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= TR1 #anophagefferens # scaffold_11:subseq(783554,7436).pep  
         (488 letters)

Database: genome.fa 
           32,746 sequences; 89,612,356 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAHK01002040.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   241   3e-63
gb|AAHK01003274.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   182   9e-46
gb|AAHK01000124.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   160   5e-39
gb|AAHK01000630.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   159   1e-38
gb|AAHK01005091.1| Trypanosoma cruzi strain CL Brener tcruzi_104...   100   5e-21
gb|AAHK01001129.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    79   2e-14
gb|AAHK01001573.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    77   9e-14
gb|AAHK01003138.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    70   9e-12
gb|AAHK01002542.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    70   1e-11
gb|AAHK01002373.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    69   1e-11
gb|AAHK01017682.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    39   0.017
gb|AAHK01000507.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   2.0  
gb|AAHK01000220.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   2.0  
gb|AAHK01000019.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   2.6  
gb|AAHK01019559.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   3.4  
gb|AAHK01002471.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   3.4  
gb|AAHK01001208.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    32   3.4  
gb|AAHK01000322.1| Trypanosoma cruzi strain CL Brener tcruzi_104...    30   7.7  

>gb|AAHK01002040.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503555, whole genome
            shotgun sequence
          Length = 7763

 Score =  241 bits (614), Expect = 3e-63
 Identities = 164/479 (34%), Positives = 246/479 (51%), Gaps = 11/479 (2%)
 Frame = +1

Query: 4    YDVVVVGGGSGGLACSKECAKLGAK-VAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMH 62
            +D+VV+G GSGGL  +   A L  K VAV+D            LGGTCVNVGC+PKKLM 
Sbjct: 2971 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 3150

Query: 63   TASIIGETLKDDAAAFGWK-DAAAGAHDWESMKSTVQDHIKSLNFKYRVALREA-GITYL 120
            T +   E L++ +A FGW+ D      +W+ + +   + + ++N  Y    R+  G+ + 
Sbjct: 3151 TGAQYMEHLRE-SAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFF 3327

Query: 121  NRLGEFEDKNTISLTDKKGNKTSVT----AARFIVAVGGRPNKLGCPGGEHAIDSDDLFS 176
               G  E KN +++ +     ++V         ++A G  P+    PG EH I S++ F 
Sbjct: 3328 LGWGSLESKNVVNVRESADPASAVKERLETENILLASGSWPHMPNIPGIEHCISSNEAFY 3507

Query: 177  LPKAPGRVLCVGGGYIALECGG----FTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIK 232
            LP+ P RVL VGGG+I++E  G    +    G  T C    ++LRGFD     ++   + 
Sbjct: 3508 LPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLT 3687

Query: 233  HHGVQLQVGVTPAKIEKDAATGVLTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGA 292
             +G+Q+     PAK+E +A  G  +VT   G   ++D V++A GR   T  L + N    
Sbjct: 3688 ANGIQILTKENPAKVELNA-DGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQN---- 3852

Query: 293  SANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPM 352
             A V  K   ++  +       ++YAIGDV   R  LTPVAI     L   +FG      
Sbjct: 3853 -AGVMIKNGGVQVDEYSRTNVSNIYAIGDVTN-RVMLTPVAINEAAALVDTIFGTTPRKT 4026

Query: 353  DYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCF 412
            D+  VA+ +F+    GT GL E+ A  +     V  Y+S F PL + +S ++ +      
Sbjct: 4027 DHTRVASAVFSIPPIGTCGLIEEVASKRYEVVAV--YLSSFTPLMHKVSGSKYKT---FV 4191

Query: 413  AKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSM 471
            AK++ + S G V+G H LG NA EI QG  I ++  A  +DF +T+G+HPT AEE  SM
Sbjct: 4192 AKIITNHSDGTVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAEELCSM 4368


>gb|AAHK01003274.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504507, whole genome
            shotgun sequence
          Length = 3479

 Score =  182 bits (463), Expect = 9e-46
 Identities = 128/385 (33%), Positives = 193/385 (50%), Gaps = 11/385 (2%)
 Frame = -3

Query: 4    YDVVVVGGGSGGLACSKECAKLGAK-VAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMH 62
            +D+VV+G GSGGL  +   A L  K VAV+D            LGGTCVNVGC+PKKLM 
Sbjct: 1152 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 973

Query: 63   TASIIGETLKDDAAAFGWK-DAAAGAHDWESMKSTVQDHIKSLNFKYRVALREA-GITYL 120
            T +   E L++ +A FGW+ D      +W+ + +   + + ++N  Y    R+  G+ + 
Sbjct: 972  TGAQYMEHLRE-SAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFF 796

Query: 121  NRLGEFEDKNTISLTDKKGNKTSVT----AARFIVAVGGRPNKLGCPGGEHAIDSDDLFS 176
               G  E KN +++ +     ++V         ++A G  P+    PG EH I S++ F 
Sbjct: 795  LGWGSLESKNVVNVRESADPASAVKERLETEHILLASGSWPHMPNIPGIEHCISSNEAFY 616

Query: 177  LPKAPGRVLCVGGGYIALECGG----FTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIK 232
            LP+ P RVL VGGG+I++E  G    +    G  T C    ++LRGFD     ++   + 
Sbjct: 615  LPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMILRGFDHTLREELTKQLT 436

Query: 233  HHGVQLQVGVTPAKIEKDAATGVLTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGA 292
             +G+Q+     PAK+E + A G  +VT   G   ++D V++A GR   T  L + N    
Sbjct: 435  ANGIQILTKENPAKVELN-ADGSKSVTFESGKKMDFDLVMMAIGRSPRTKDLQLQN---- 271

Query: 293  SANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPM 352
             A V  K   ++  +       ++YAIGDV   R  LTPVAI     L   +FG      
Sbjct: 270  -AGVMIKNGGVQVDEYSRTNVSNIYAIGDVT-NRVMLTPVAINEAAALVDTIFGTTPRKT 97

Query: 353  DYECVATTIFTPLEYGTIGLSEDDA 377
            D+  VA+ +F+    GT GL E+ A
Sbjct: 96   DHTRVASAVFSIPPIGTCGLIEEVA 22


>gb|AAHK01000124.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507089, whole genome
             shotgun sequence
          Length = 63491

 Score =  160 bits (405), Expect = 5e-39
 Identities = 135/476 (28%), Positives = 211/476 (44%), Gaps = 13/476 (2%)
 Frame = -3

Query: 4     YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
             YDVVV+GGG GG   S + A+LG K A ++            LGGTC+NVGCIP K +  
Sbjct: 62415 YDVVVIGGGPGGYVASIKAAQLGMKTACVE--------KRGTLGGTCLNVGCIPSKALLH 62260

Query: 64    ASIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNRL 123
             A+ +        A +G         D   M+   +  +K L        ++  +TY    
Sbjct: 62259 ATHLYHDAHASFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE 62080

Query: 124   GEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLG-CPGGEHAI-DSDDLFSLPKAP 181
             G FE  ++I +    G +  +   + I+A G  P +L   P  E  +  S    +LP+ P
Sbjct: 62079 GSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVP 61900

Query: 182   GRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGV----- 236
               ++ +GGG I LE G   A +G   T +        F   C   ++  + +  V     
Sbjct: 61899 KTMVVIGGGVIGLELGSVWARLGAEVTVV-------EFAPRCAPTLDEDVTNALVGALAK 61741

Query: 237   -QLQVGVTPAKI--EKDAATGVLTVTDSGGGVHE---YDTVLVATGRYADTAALGIDNVP 290
              +    +T  K+   K+    V    +   G  E    + +LV+ GR   T  LG+D + 
Sbjct: 61740 NEKMKFMTSTKVVGGKNNGDSVSLEVEGKNGKRETLTCEALLVSVGRRPFTGGLGLDKI- 61564

Query: 291   GASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTE 350
              A+ N     K     D      P VYAIGDVV+  P L   A + G+  A  +  GK  
Sbjct: 61563 NAAKNERGFVK---IGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACA-EILAGKPG 61396

Query: 351   PMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDG 410
              ++Y  +   I+T  E  ++G SED+ K +     V   + +F P   A S  ++   + 
Sbjct: 61395 HVNYGVIPAVIYTMPEVASVGKSEDELKKE----GVAYKVGKF-PFN-ANSRAKAVSTED 61234

Query: 411   CFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAE 466
              F K++VDK+T +++G H +   AGE+     +AM  GA+  D   T   HPT++E
Sbjct: 61233 GFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSE 61066


>gb|AAHK01000630.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511025, whole genome
             shotgun sequence
          Length = 28018

 Score =  159 bits (401), Expect = 1e-38
 Identities = 136/486 (27%), Positives = 214/486 (44%), Gaps = 23/486 (4%)
 Frame = +1

Query: 4     YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
             YDVVV+GGG GG   S + A+LG K A ++            LGGTC+NVGCIP K +  
Sbjct: 23077 YDVVVIGGGPGGYVASIKAAQLGMKTACVE--------KRGTLGGTCLNVGCIPSKALLH 23232

Query: 64    ASIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNRL 123
             A+ +      + A +G         D   M+   +  +K L        ++  +TY    
Sbjct: 23233 ATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE 23412

Query: 124   GEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLG-CPGGEHAI-DSDDLFSLPKAP 181
             G FE  ++I +    G +      + I+A G  P +L   P  E  +  S    +LP+ P
Sbjct: 23413 GSFETAHSIRVNGLDGKQEMFETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVP 23592

Query: 182   GRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGVQLQVG 241
               ++ +GGG I LE G   A +G   T +        F   C   ++  + +  V     
Sbjct: 23593 KTMVVIGGGVIGLELGSVWARLGAEVTVV-------EFAPRCAPTLDEDVTNALV----- 23736

Query: 242   VTPAKIEKDAATGVLTVTDSGGGVHEYDTV-------------------LVATGRYADTA 282
                  + K+     +T T   GG +  D+V                   LV+ GR   T 
Sbjct: 23737 ---GALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETLTCEALLVSVGRRPFTG 23907

Query: 283   ALGIDNVPGASANVNAKTKK--LECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRL 340
              LG+D +     NV AK ++  ++  D      P VYAIGDVV+  P L   A + G+  
Sbjct: 23908 GLGLDKI-----NV-AKNERGFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVAC 24069

Query: 341   ARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYAL 400
             A  +  GK   ++Y  +   I+T  E  ++G SE++ K +     V   + +F P   A 
Sbjct: 24070 A-EILAGKPGHVNYGVIPAVIYTMPEVASVGKSEEELKKE----GVAYKVGKF-PFN-AN 24228

Query: 401   SETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGI 460
             S  ++   +  F K++VDK+T +++G H +   AGE+     +AM  GA+  D   T   
Sbjct: 24229 SRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHA 24408

Query: 461   HPTVAE 466
             HPT++E
Sbjct: 24409 HPTMSE 24426


>gb|AAHK01005091.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053484299, whole genome
            shotgun sequence
          Length = 1701

 Score =  100 bits (250), Expect = 5e-21
 Identities = 62/157 (39%), Positives = 87/157 (55%)
 Frame = -1

Query: 315  HVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSE 374
            ++YAIGDV   R  LTPVAI     L   +FG      D+  VA+ +F+    GT GL E
Sbjct: 1650 NIYAIGDVTN-RVMLTPVAINEAAALVDTVFGTNPRKTDHTRVASAVFSIPPIGTCGLIE 1474

Query: 375  DDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNA 434
            + A  +     V  Y+S F PL + +S ++ +      AK++ + S G V+G H LG NA
Sbjct: 1473 EVASKRYEVVAV--YLSSFTPLMHNISGSKYKT---FVAKIITNHSDGTVLGVHLLGDNA 1309

Query: 435  GEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSM 471
             EI QG  I ++  A  +DF +T+G+HPT AEE  SM
Sbjct: 1308 PEIIQGVGICLKLNAKISDFYNTIGVHPTSAEELCSM 1198


>gb|AAHK01001129.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507757, whole genome
             shotgun sequence
          Length = 16967

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 105/496 (21%), Positives = 197/496 (39%), Gaps = 31/496 (6%)
 Frame = -1

Query: 4     YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
             +DV V+G G  G+A +        +V +++  +         +GG  +  G +  K+M  
Sbjct: 15311 FDVCVIGAGPAGIAAALRAVDYNKRVCLVEAKR---------VGGCDLWNGALQSKVMWE 15159

Query: 64    ASIIGETLKDDAAAFGWKDAAAG--AHDWESMKSTVQDHIKSLNFKYRVALREAGITYLN 121
              S          A   +    +     D E M+ ++    +    +   ALR A ++ + 
Sbjct: 15158 MSNFFAKANGSGALRVYSTVISSFMEPDEEKMRESLVQTSEVREKQIIEALRAANVSLMY 14979

Query: 122   RLGEFEDKNTISLTDKKGNK-TSVTAARFIVAVGGRPNK--LGCPGGEHAIDSDDLFSLP 178
                 F   + + + +++  +  +VTA  FI+A G  P +        +  + SD+L  +P
Sbjct: 14978 GRAFFASPHQVEVRNRETKEYHAVTADYFIIATGSTPREHPYVKTDQKRVVTSDELMMMP 14799

Query: 179   KAPGRVLCVGGGYIALECGGFTAGMGYPTTCMV--RSILLRGFDRECVGKIEAHIKHHGV 236
               P  ++ VGGG +  E     A +G     ++     ++   D + V +I+  +++HGV
Sbjct: 14798 -LPKSMVIVGGGVLGSEFATIYARLGKTKVYLIDKEKCIMPKEDDDIVERIQQSMENHGV 14622

Query: 237   ---QLQVGVTPAKIEKDAAT----------------GVLTVTDSGGGVHEYDTVLVATGR 277
                Q  V       E+D A                  ++         +E +  L+A GR
Sbjct: 14621 VIHQDSVLYDMQSWEEDDAEMRAHPEDPTQRSGVRYSIMNRRTREIETYEVERALIAIGR 14442

Query: 278   YADTAALGIDNVPGASANVNAKTKKL----ECVDEQLPGAPHVYAIGDVVEGRPELTPVA 333
               +   LG+ N   A   V      L    +CVD+      H+YAIGD      +L  V 
Sbjct: 14441 KPNYIGLGLHN---AGCKVREGALVLNPFGKCVDQD-----HIYAIGDAAND-SKLVSVG 14289

Query: 334   IEAGLRLARRLFG-GKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISE 392
                G  +   +FG  +T P+ ++     IF  +   ++G++E + + Q       SY+  
Sbjct: 14288 EAKGRLVVDHIFGVQQTSPLRHD-FTRLIFLTIAVASVGMNEKECQRQR-----ISYVMA 14127

Query: 393   FAPLEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYA 452
                 E       ++  DG    L  + S   ++G   LG NA  I +  S A+R+  +  
Sbjct: 14126 KYGFELCSRAVAADNTDGFVKILATNDSKKTLLGVRALGMNASTIIELASAAIRRNQSAY 13947

Query: 453   DFISTVGIHPTVAEEF 468
             +    +  +P+V++ F
Sbjct: 13946 ELSELLTAYPSVSQAF 13899



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 106/488 (21%), Positives = 194/488 (39%), Gaps = 25/488 (5%)
 Frame = -1

Query: 4     YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
             +DV V+GGG  G+A +        +V +++  +         +GG  +  G +  K +  
Sbjct: 13091 FDVCVIGGGPAGVAAALRAVDYRKRVCLVEASR---------VGGVDLWDGTLQSKTLWE 12939

Query: 64    ASIIGETLKDDAA-AFGWKDAAAGAHDWES---MKSTVQDHIKSLNFKYRVALREAGITY 119
              +     L   AA     +DA AG  +  S   +   +QD       +   ALR AG+  
Sbjct: 12938 MAKYASRLSGPAAQRLFEEDAVAGVKNKISDARVLQALQDVSGIREQQLLDALRTAGVEI 12759

Query: 120   LNRLGEFEDKNTISL-TDKKGNKTSVTAARFIVAVGGRPNKLGC--PGGEHAIDSDDLFS 176
             +   G F   N + + +   G    V A  FI+A GG P         G   + ++ +  
Sbjct: 12758 VFGKGMFSSPNELDVHSTGSGVYNVVRADYFIIATGGVPRTQFHMEADGRRIVTTETIMR 12579

Query: 177   LPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSI--LLRGFDRECVGKIEAHIKHH 234
             LP  P  ++ +G G I  E     A +G     +V     +L+  D +    ++  +   
Sbjct: 12578 LP-IPSSLVIIGAGAIGCEFASIYANLGRTKVSLVDRTPRILQVEDEDISQFVQDQLVRL 12402

Query: 235   GVQLQVGVTPAKIE-----KDAATGVLTVTDSGGGV------HEYDTVLVATGRYADTAA 283
             GV +    T   +E     ++    + +V  +   V      +E +  L++ GR  + + 
Sbjct: 12401 GVTIHSNCTLFDLESWGDNEEEGGCIYSVRKNDIDVVSPVETYEAERALISVGRVPNVSG 12222

Query: 284   LGIDNVPGASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARR 343
             LG++N    S  V      ++  +  LP   H+YAIGDV   R  L  +    G      
Sbjct: 12221 LGLEN---TSCKVTDGRLVVDAFNRCLP-HKHIYAIGDVC-ARRALVNLGEAQGRGAIDH 12057

Query: 344   LFGGKTE-PMDYEC---VATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYA 399
             ++  K E  ++ E    ++T +F   E   +GL+E   +A+     V  Y         A
Sbjct: 12056 IYSEKPEKSINAEALTNLSTILFLDEELACVGLNEQQCRARSLGYIVARYGYGHLSRALA 11877

Query: 400   LSETRSERGDGCFAKLVVDKSTGK-VVGFHYLGPNAGEITQGFSIAMRKGATYADFISTV 458
             +  T        F K++V   + K ++G    G +AG I +  S+++R   +  + +   
Sbjct: 11876 MGNTTG------FCKVIVTSDSEKRLLGVRAFGVHAGSIIEVASLSIRSLESAYELLKLT 11715

Query: 459   GIHPTVAE 466
               +P+  +
Sbjct: 11714 PSYPSAVQ 11691


>gb|AAHK01001573.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508933, whole genome
            shotgun sequence
          Length = 11317

 Score = 76.6 bits (187), Expect = 9e-14
 Identities = 108/496 (21%), Positives = 197/496 (39%), Gaps = 31/496 (6%)
 Frame = -1

Query: 4    YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
            +DV V+G G  G+A +        +V +++  +         +GG  +  G +  K+M  
Sbjct: 5035 FDVCVIGAGPAGIAAALRAVDYKKRVCLVEAKR---------VGGCDLWNGALQSKVMWE 4883

Query: 64   ASIIGETLKDDAAAFGWKDAAAG--AHDWESMKSTVQDHIKSLNFKYRVALREAGITYLN 121
             S          A   +    +     D E M+ ++    +    +   ALR A ++ + 
Sbjct: 4882 MSNFFAKANGSGALRVYSTVISSFMEPDEEKMRESLVQASEVREKQIIEALRAANVSLMY 4703

Query: 122  RLGEFEDKNTISLTDKKGNK-TSVTAARFIVAVGGRPNK--LGCPGGEHAIDSDDLFSLP 178
                F   + + + +++  +  +VTA  FI+A G  P +        +  + SD+L  +P
Sbjct: 4702 GRAFFASPHQVEVRNRETKEYHAVTADYFIIATGSTPKEHPYVKTDQKRVVTSDELMMMP 4523

Query: 179  KAPGRVLCVGGGYIALECGGFTAGMGYPTTCMV--RSILLRGFDRECVGKIEAHIKHHGV 236
              P  ++ VGGG +  E     A +G     ++     ++   D + V +I+  +++HGV
Sbjct: 4522 -LPKSMVIVGGGVLGSEFATIYARLGKTKVYLIDKEKCIMPKEDDDIVERIQQSMENHGV 4346

Query: 237  ---QLQVGVTPAKIEKDAATGVLTVTD--SGGGV--------------HEYDTVLVATGR 277
               Q  V       E+D A       D     GV              +E +  L+A GR
Sbjct: 4345 VIHQDSVLYDMQSWEEDDAEMQAHPEDPTQRSGVRYSIMNRRTREIETYEVERALIAIGR 4166

Query: 278  YADTAALGIDNVPGASANVNAKTKKL----ECVDEQLPGAPHVYAIGDVVEGRPELTPVA 333
              +   LG+ N   A   V      L    +CVD+      H+YAIGD      +L  V 
Sbjct: 4165 KPNYIGLGLYN---AGCKVREGALVLNPFGKCVDQD-----HIYAIGDAAND-SKLVSVG 4013

Query: 334  IEAGLRLARRLFG-GKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISE 392
               G  +   +FG  +T P+ ++     IF  +   ++G++E + + Q       SY+  
Sbjct: 4012 EAKGRLVVDHIFGVQQTSPLRHD-FTRLIFLTIAVASVGMNEKECQRQR-----ISYVMA 3851

Query: 393  FAPLEYALSETRSERGDGCFAKLVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYA 452
                E       ++  DG    L  + S   ++G   LG NA  I +  S A+R+  +  
Sbjct: 3850 KYGFELCSRAVAADNTDGFVKILATNDSKKTLLGVRALGMNASTIIELASAAIRRNQSAY 3671

Query: 453  DFISTVGIHPTVAEEF 468
                 +  +P+V++ F
Sbjct: 3670 QLSELLTAYPSVSQAF 3623



 Score = 70.1 bits (170), Expect = 9e-12
 Identities = 106/488 (21%), Positives = 195/488 (39%), Gaps = 25/488 (5%)
 Frame = -2

Query: 4    YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
            +DV V+GGG  G+A +        +V +++  +         +GG  +  G +  K +  
Sbjct: 2823 FDVCVIGGGPAGVAAALRAVDYRKRVCLVEASR---------VGGVDLWDGTLQSKTLWE 2671

Query: 64   ASIIGETLKDDAA-AFGWKDAAAGAHDWES---MKSTVQDHIKSLNFKYRVALREAGITY 119
             +     L   AA     +DA AG  +  S   +   +QD       +   ALR AG+  
Sbjct: 2670 MAKYASRLSGPAAQRLFEEDAVAGVKNKISDARVLQALQDVSGVREQQLLDALRTAGVEI 2491

Query: 120  LNRLGEFEDKNTISL-TDKKGNKTSVTAARFIVAVGGRPNKLGC--PGGEHAIDSDDLFS 176
            +   G F   N + + +   G    V A  FI+A GG P         G   + ++ +  
Sbjct: 2490 VFGKGMFSSPNELDVHSTGSGVYNVVRADYFIIATGGVPRTQFHMEADGRRIVTTETIMR 2311

Query: 177  LPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSI--LLRGFDRECVGKIEAHIKHH 234
            LP  P  ++ +G G I  E     A +G     +V     +L+  D +    ++  +   
Sbjct: 2310 LP-IPSSLVIIGAGAIGCEFASIYANLGRTKVSLVDRTPRILQVEDEDISQFVQDQLVRL 2134

Query: 235  GVQLQVGVTPAKIE-----KDAATGVLTVTDSGGGV------HEYDTVLVATGRYADTAA 283
            GV +    T   +E     ++    + +V  +   V      +E +  L++ GR  + + 
Sbjct: 2133 GVTIHSNCTLFDLESWGDNEEEGGCIYSVRKNDIDVVSPVETYEAERALISVGRVPNVSG 1954

Query: 284  LGIDNVPGASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARR 343
            LG++N    S  V      ++  +  LP   H+YAIGDV   R  L  +    G      
Sbjct: 1953 LGLEN---TSCKVTDGRLVVDAFNRCLP-HKHIYAIGDVC-ARRALVNLGEAQGRGAIDH 1789

Query: 344  LFGGKTE-PMDYEC---VATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYA 399
            ++  K E  ++ E    ++T +F   E   +GL+E   +A+     V  Y         A
Sbjct: 1788 IYSEKPEKSINAEALTNLSTILFLDEELACVGLNEQQCRARSLGYIVARYGYGHLSRALA 1609

Query: 400  LSETRSERGDGCFAKLVVDKSTGK-VVGFHYLGPNAGEITQGFSIAMRKGATYADFISTV 458
            +  T        F K++V   + K ++G    G +AG I +  S+++R+  +  + +   
Sbjct: 1608 MGNTTG------FCKVIVTSDSEKRLLGVRAFGVHAGSIIEVASLSIRRLESAYELLKLT 1447

Query: 459  GIHPTVAE 466
              +P+  +
Sbjct: 1446 PSYPSAVQ 1423


>gb|AAHK01003138.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507097, whole genome
            shotgun sequence
          Length = 3769

 Score = 70.1 bits (170), Expect = 9e-12
 Identities = 106/488 (21%), Positives = 195/488 (39%), Gaps = 25/488 (5%)
 Frame = -3

Query: 4    YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
            +DV V+GGG  G+A +        +V +++  +         +GG  +  G +  K +  
Sbjct: 2756 FDVCVIGGGPAGVAAALRAVDYRKRVCLVEASR---------VGGVDLWDGTLQSKTLWE 2604

Query: 64   ASIIGETLKDDAA-AFGWKDAAAGAHDWES---MKSTVQDHIKSLNFKYRVALREAGITY 119
             +     L   AA     +DA AG  +  S   +   +QD       +   ALR AG+  
Sbjct: 2603 MAKYASRLSGPAAQRLFEEDAVAGVKNKISDARVLQALQDVSGIREQQLLDALRTAGVEI 2424

Query: 120  LNRLGEFEDKNTISL-TDKKGNKTSVTAARFIVAVGGRPNKLGC--PGGEHAIDSDDLFS 176
            +   G F   N + + +   G    V A  FI+A GG P         G   + ++ +  
Sbjct: 2423 VFGKGMFSSPNELDVHSTGSGVYNVVRADYFIIATGGVPRTQFHMEADGRRIVTTETIMR 2244

Query: 177  LPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSI--LLRGFDRECVGKIEAHIKHH 234
            LP  P  ++ +G G I  E     A +G     +V     +L+  D +    ++  +   
Sbjct: 2243 LP-IPSSLVIIGAGAIGCEFASIYANLGRTKVSLVDRTPRILQVEDEDISQFVQDQLVRL 2067

Query: 235  GVQLQVGVTPAKIE-----KDAATGVLTVTDSGGGV------HEYDTVLVATGRYADTAA 283
            GV +    T   +E     ++    + +V  +   V      +E +  L++ GR  + + 
Sbjct: 2066 GVTIHSNCTLFDLESWGDNEEEGGCIYSVRKNDIDVVSPVETYEAERALISVGRVPNVSG 1887

Query: 284  LGIDNVPGASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARR 343
            LG++N    S  V      ++  +  LP   H+YAIGDV   R  L  +    G      
Sbjct: 1886 LGLEN---TSCKVTDGRLVVDAFNRCLP-HKHIYAIGDVC-ARRALVNLGEAQGRGAIDH 1722

Query: 344  LFGGKTE-PMDYEC---VATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYA 399
            ++  K E  ++ E    ++T +F   E   +GL+E   +A+     V  Y         A
Sbjct: 1721 IYSEKPEKSINAEALTNLSTILFLDEELACVGLNEQQCRARSLGYIVARYGYGHLSRALA 1542

Query: 400  LSETRSERGDGCFAKLVVDKSTGK-VVGFHYLGPNAGEITQGFSIAMRKGATYADFISTV 458
            +  T        F K++V   + K ++G    G +AG I +  S+++R+  +  + +   
Sbjct: 1541 MGNTTG------FCKVIVTSDSEKRLLGVRAFGVHAGSIIEVASLSIRRLESAYELLKLT 1380

Query: 459  GIHPTVAE 466
              +P+  +
Sbjct: 1379 PSYPSAVQ 1356


>gb|AAHK01002542.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509379, whole genome
            shotgun sequence
          Length = 5439

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 101/477 (21%), Positives = 179/477 (37%), Gaps = 13/477 (2%)
 Frame = +3

Query: 5    DVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHTA 64
            DV V+GGG  G+A +        K  +++  +         +GG  +  G +  K +   
Sbjct: 1113 DVCVIGGGPAGIATALRAVDYKKKACIVEANR---------IGGADLWNGALQSKTLWEM 1265

Query: 65   SIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRV-ALREAGITYLNRL 123
            S     +    A+   K          S       +   L +   V  L+   I  +   
Sbjct: 1266 SKFVRLMTGQTASRFMKPLMPLPPIDSSNAQKAIKNASELRYTQIVHQLKIVDIDVIEGY 1445

Query: 124  GEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCP--GGEHAIDSDDLFSLPKAP 181
            G F   +++ +    G    V A  F++A G +P K       G+    SDD+ +    P
Sbjct: 1446 GSFMSPHSVDVQLASGGTERVEADYFVIACGAQPRKHVSVTWDGKVVFTSDDIMNRA-FP 1622

Query: 182  GRVLCVGGGYIALECGGFTAGMGYPTTCMVRSI--LLRGFDRECVGKIEAHIKHHGVQLQ 239
              ++ +G G I  E     A  G     ++     +L   D +    ++  +++ GV   
Sbjct: 1623 KSIVIIGAGVIGCEFASIFANFGMTKVNVIEKSNRILPMEDDDVAEFVQKLLENKGVTFH 1802

Query: 240  --VGVTPAKIEKDAATGVL-TVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANV 296
                +   K++       L  + D+    H  D  LV+ GR  + + LG++N+      V
Sbjct: 1803 HHSALESNKVKNGQFHYTLRNLIDNKLTTHIVDNALVSIGREPNLSGLGLENI-----GV 1967

Query: 297  NAKTKKLECVD-EQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEP---M 352
              +  KLE     ++    H+YA GDV   +  L  V    G      ++    E     
Sbjct: 1968 GLQRGKLERDQFNRVKPHKHIYACGDVAT-KFALVNVGELEGRSCIDHIYHPHPEGEFVQ 2144

Query: 353  DYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCF 412
              + ++T +F   E   +GL+E   + Q     +  Y  EF     A+  TR       F
Sbjct: 2145 RLDNLSTIMFLDQEVAAVGLNEQQCRKQNIAYKMARYGYEFVARAVAMGNTRG------F 2306

Query: 413  AKLVVDKSTG-KVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEF 468
             KL+V      +V+G   +GP+A  + +  S+A+    T  +       +PTV + F
Sbjct: 2307 VKLIVTNDREMQVLGVRAIGPHASSVIELASLAIHNKETLYNLSELRTAYPTVTQGF 2477


>gb|AAHK01002373.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506701, whole genome
            shotgun sequence
          Length = 6170

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 101/477 (21%), Positives = 178/477 (37%), Gaps = 13/477 (2%)
 Frame = +3

Query: 5    DVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHTA 64
            DV V+GGG  G+A +        K  +++  +         +GG  +  G +  K +   
Sbjct: 1389 DVCVIGGGPAGIATALRAVDYKKKACIVEANR---------IGGADLWNGALQSKTLWEM 1541

Query: 65   SIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRV-ALREAGITYLNRL 123
            S     +    A+   K          S       +   L +   V  L+   I  +   
Sbjct: 1542 SKFVRLMTGQTASRFMKPLMPLPPIDSSNAQKAIKNASELRYAQIVHQLKIVDIDVIEGY 1721

Query: 124  GEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCP--GGEHAIDSDDLFSLPKAP 181
            G F    ++ +    G    V A  F++A G +P K       G+    SDD+ +    P
Sbjct: 1722 GSFMSPQSVDVQLASGGTERVEADYFVIACGAQPRKHVSVTWDGKVVFTSDDIMNRA-FP 1898

Query: 182  GRVLCVGGGYIALECGGFTAGMGYPTTCMVRSI--LLRGFDRECVGKIEAHIKHHGVQLQ 239
              ++ +G G I  E     A  G     ++     +L   D +    ++  +++ GV   
Sbjct: 1899 KSIVIIGAGVIGCEFASIFANFGMTKVNVIEKSNRILPMEDDDVAEFVQKLLENKGVTFH 2078

Query: 240  --VGVTPAKIEKDAATGVL-TVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANV 296
                +   K++       L  + D+    H  D  LV+ GR  + + LG++N+      V
Sbjct: 2079 HHSALESNKVKNGQFHYTLRNLIDNKLTTHIVDNALVSIGREPNLSGLGLENI-----GV 2243

Query: 297  NAKTKKLECVD-EQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEP---M 352
              +  KLE     ++    H+YA GDV   +  L  V    G      ++    E     
Sbjct: 2244 GIQRGKLERDQFNRVKPHKHIYACGDVAT-KFALVNVGELEGRSCIDHIYHPHPEGEFVQ 2420

Query: 353  DYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCF 412
              + ++T +F   E   +GL+E   + Q     +  Y  EF     A+  TR       F
Sbjct: 2421 RLDNLSTIMFLDQEVAAVGLNEQQCRKQNIAYKMARYGYEFVARAVAMGNTRG------F 2582

Query: 413  AKLVVDKSTG-KVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEF 468
             KL+V      +V+G   +GP+A  + +  S+A+    T  +       +PTV + F
Sbjct: 2583 VKLIVTNDREMQVLGVRAIGPHASSVIELASLAIHNKETLYNLSELRTAYPTVTQGF 2753


>gb|AAHK01017682.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053487235, whole
           genome shotgun sequence
          Length = 947

 Score = 39.3 bits (90), Expect = 0.017
 Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 5/206 (2%)
 Frame = -3

Query: 4   YDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLMHT 63
           +DV V+G G  G+A +        +V +++  +         +GG  +  G +  K+M  
Sbjct: 591 FDVCVIGAGPAGIAAALRAVDYKKRVCLVEAKR---------VGGCDLWNGALQSKVMWE 439

Query: 64  ASIIGETLKDDAAAFGWKDAAAG--AHDWESMKSTVQDHIKSLNFKYRVALREAGITYLN 121
            S          A   +    +     D E M+ ++    +    +   ALR A ++ + 
Sbjct: 438 MSNFFAKANGSGALRVYSTVISSFMEPDEEKMRESLVQASEVREKQIIEALRAANVSLMY 259

Query: 122 RLGEFEDKNTISLTDKKGNK-TSVTAARFIVAVGGRPNK--LGCPGGEHAIDSDDLFSLP 178
               F   + + + +++  +  +VTA  FI+A G  P +        +  + SD+L  +P
Sbjct: 258 GRAFFASPHQVEVRNRETKEYHAVTADYFIIATGSTPKEHPYVKTDQKRVVTSDELMMMP 79

Query: 179 KAPGRVLCVGGGYIALECGGFTAGMG 204
             P  ++ VGGG +  E     A +G
Sbjct: 78  -LPKSMVIVGGGVLGSEFATIYARLG 4


>gb|AAHK01000507.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511423, whole genome
             shotgun sequence
          Length = 32262

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 13/30 (43%), Positives = 23/30 (76%)
 Frame = +2

Query: 4     YDVVVVGGGSGGLACSKECAKLGAKVAVLD 33
             +DV+V+GGG+ GL  + + A+ G +VA++D
Sbjct: 13361 FDVLVIGGGATGLYTAVDAAQRGLRVALVD 13450


>gb|AAHK01000220.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507949, whole genome
             shotgun sequence
          Length = 50252

 Score = 32.3 bits (72), Expect = 2.0
 Identities = 13/30 (43%), Positives = 23/30 (76%)
 Frame = -2

Query: 4     YDVVVVGGGSGGLACSKECAKLGAKVAVLD 33
             +DV+V+GGG+ GL  + + A+ G +VA++D
Sbjct: 19546 FDVLVIGGGATGLYTAVDAAQRGLRVALVD 19457


>gb|AAHK01000019.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510377, whole genome
             shotgun sequence
          Length = 111767

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
 Frame = -2

Query: 193   ALECGGFTAG-MGYPTTCMVR--SILLRGFDRECVGKIEAHIKHHGVQLQVGVTPAKIEK 249
             A++C  F  G M + T C V   S+LL   D E V   E + +  GV   +     ++  
Sbjct: 24601 AMKCE*FLFGLMPFVTLCGVATVSLLLLCVDGELVCA-EGYTQVTGVMAMM--MTGRVLL 24431

Query: 250   DAATGVLTVTDSGGGVHEYDTVLVATGRYA-DTAALGI-------DNVPGASANVNAKTK 301
               A  VL     GGG  E    LV       D+A++G+         VPG   N + + K
Sbjct: 24430 VCALCVLWCGAGGGGCSE---ALVPVAEITVDSASVGVVTDKDTDRTVPGELGNPSVEKK 24260

Query: 302   KLECVDEQLPGAPHVYAIGDV 322
             +L+ V++  PG+P   A  D+
Sbjct: 24259 QLQNVEDSAPGSPQSQAGLDI 24197


>gb|AAHK01019559.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053402553, whole
           genome shotgun sequence
          Length = 922

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -2

Query: 2   FDYDVVVVGGGSGGLACSKECAKLGAKVAVLD---FVKP 37
           +DYD ++VGG   G   +K  ++   KV +L+   FVKP
Sbjct: 768 YDYDAIIVGGSIAGPVMAKALSEQNRKVLLLERSLFVKP 652


>gb|AAHK01002471.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509587, whole genome
            shotgun sequence
          Length = 5726

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +2

Query: 2    FDYDVVVVGGGSGGLACSKECAKLGAKVAVLD---FVKP 37
            +DYD ++VGG   G   +K  ++   KV +L+   FVKP
Sbjct: 5393 YDYDAIIVGGSIAGPVMAKALSEQNRKVLLLERSLFVKP 5509


>gb|AAHK01001208.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509589, whole genome
            shotgun sequence
          Length = 15541

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 2    FDYDVVVVGGGSGGLACSKECAKLGAKVAVLD---FVKP 37
            +DYD ++VGG   G   +K  ++   KV +L+   FVKP
Sbjct: 1245 YDYDAIIVGGSIAGPVMAKALSEQNRKVLLLERSLFVKP 1361


>gb|AAHK01000322.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506939, whole genome
             shotgun sequence
          Length = 41346

 Score = 30.4 bits (67), Expect = 7.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -3

Query: 206   PTTCMVRSILLRGFDRECVGKIEAHIKHHGVQLQVGVTPA 245
             P TC+  S       +E   K E ++KHH  Q QV  T A
Sbjct: 40834 PVTCVQPSAQTNNTSKESESKREKNVKHHHTQ*QVAATTA 40715


  Database: genome.fa
    Posted date:  Jan 19, 2010  5:13 PM
  Number of letters in database: 89,612,356
  Number of sequences in database:  32,746
  
Lambda     K      H
   0.317    0.136    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,587,139
Number of Sequences: 32746
Number of extensions: 1079745
Number of successful extensions: 4604
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3157
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 907
Number of HSP's gapped (non-prelim): 3989
length of query: 488
length of database: 29,870,785
effective HSP length: 111
effective length of query: 377
effective length of database: 26,235,979
effective search space: 9890964083
effective search space used: 9890964083
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
