TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= TR1 (499 letters) Database: genome.fa 32,746 sequences; 89,612,356 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAHK01002040.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 208 2e-53 gb|AAHK01003274.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 165 2e-40 gb|AAHK01000630.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 145 2e-34 gb|AAHK01000124.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 140 5e-33 gb|AAHK01005091.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 101 4e-21 gb|AAHK01001129.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 91 5e-18 gb|AAHK01001573.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 90 8e-18 gb|AAHK01002542.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 82 2e-15 gb|AAHK01002373.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 80 9e-15 gb|AAHK01017682.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 44 0.001 gb|AAHK01000279.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 33 1.2 gb|AAHK01000740.1| Trypanosoma cruzi strain CL Brener tcruzi_104... 31 6.0 >gb|AAHK01002040.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053503555, whole genome shotgun sequence Length = 7763 Score = 208 bits (529), Expect = 2e-53 Identities = 144/434 (33%), Positives = 223/434 (51%), Gaps = 11/434 (2%) Frame = +1 Query: 55 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE-TVKHDWDRMIEAVQNHIGSLN 113 LGGTCVNVGC+PKKLM A + L++S +GW+ + T++ +W ++I + ++N Sbjct: 3100 LGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNIN 3279 Query: 114 WGYRVALREKK-VVYENAYGQFIGPHRIKATNNKG-----KEKIYSAERFLIATGERPRY 167 Y R+ + + + +G + + + KE++ E L+A+G P Sbjct: 3280 KSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERL-ETENILLASGSWPHM 3456 Query: 168 LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGI---GLDVTVMVR-SI 223 IPG E+CISS++ F LP P + L VG ++++E AG VT+ R + Sbjct: 3457 PNIPG-IEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM 3633 Query: 224 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 283 +LRGFD + ++ + + +GI+ + + P KVE G ++S E + + Sbjct: 3634 ILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADG--------SKSVTFESGKKMD 3789 Query: 284 YNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELT 343 ++ VM+AIGR T+ + L+ GV I K G + V + +TNV IYAIGD+ ++V LT Sbjct: 3790 FDLVMMAIGRSPRTKDLQLQNAGVMI--KNGGVQVDEYSRTNVSNIYAIGDV-TNRVMLT 3960 Query: 344 PVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYH 403 PVAI L ++ + K D+ V + VF+ G CGL EE A +++ E + VY Sbjct: 3961 PVAINEAAALVDTIFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY--EVVAVYL 4134 Query: 404 SYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKK 463 S F PL + AKII N D V+G H+LG NA E+ QG LK Sbjct: 4135 SSFTPLMHKVSGSKYKTFVAKIITNHSDG-TVLGVHLLGDNAPEIIQGVGICLKLNAKIS 4311 Query: 464 QLDSTIGIHPVCAE 477 +TIG+HP AE Sbjct: 4312 DFYNTIGVHPTSAE 4353 >gb|AAHK01003274.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053504507, whole genome shotgun sequence Length = 3479 Score = 165 bits (417), Expect = 2e-40 Identities = 112/351 (31%), Positives = 184/351 (52%), Gaps = 11/351 (3%) Frame = -3 Query: 55 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE-TVKHDWDRMIEAVQNHIGSLN 113 LGGTCVNVGC+PKKLM A + L++S +GW+ + T++ +W ++I + ++N Sbjct: 1023 LGGTCVNVGCVPKKLMVTGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNIN 844 Query: 114 WGYRVALREKK-VVYENAYGQFIGPHRIKATNNKG-----KEKIYSAERFLIATGERPRY 167 Y R+ + + + +G + + + KE++ E L+A+G P Sbjct: 843 KSYEEMFRDTEGLEFFLGWGSLESKNVVNVRESADPASAVKERL-ETEHILLASGSWPHM 667 Query: 168 LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGI---GLDVTVMVR-SI 223 IPG E+CISS++ F LP P + L VG ++++E AG VT+ R + Sbjct: 666 PNIPG-IEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM 490 Query: 224 LLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 283 +LRGFD + ++ + + +GI+ + + P KVE G ++S E + + Sbjct: 489 ILRGFDHTLREELTKQLTANGIQILTKENPAKVELNADG--------SKSVTFESGKKMD 334 Query: 284 YNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELT 343 ++ VM+AIGR T+ + L+ GV I K G + V + +TNV IYAIGD+ ++V LT Sbjct: 333 FDLVMMAIGRSPRTKDLQLQNAGVMI--KNGGVQVDEYSRTNVSNIYAIGDV-TNRVMLT 163 Query: 344 PVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKF 394 PVAI L ++ + K D+ V + VF+ G CGL EE A +++ Sbjct: 162 PVAINEAAALVDTIFGTTPRKTDHTRVASAVFSIPPIGTCGLIEEVASKRY 10 >gb|AAHK01000630.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053511025, whole genome shotgun sequence Length = 28018 Score = 145 bits (365), Expect = 2e-34 Identities = 113/430 (26%), Positives = 198/430 (46%), Gaps = 4/430 (0%) Frame = +1 Query: 52 RWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIG 110 R LGGTC+NVGCIP K L+H L A + YG E V D +M + + + Sbjct: 23170 RGTLGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVK 23349 Query: 111 SLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG- 169 L G ++ KV Y G F H I+ GK++++ ++ +IATG P L Sbjct: 23350 GLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMFETKKTIIATGSEPTELPF 23529 Query: 170 IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGF 228 +P D++ +SS +LP P +V+G + LE A +G +VTV+ Sbjct: 23530 LPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTL 23709 Query: 229 DQDMANK-IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 287 D+D+ N +G + +KF+ V G L V ++ E + + Sbjct: 23710 DEDVTNALVGALAKNEKMKFMTS--TKVVGGTNNGDSVSLEVEGKNGKRETL---TCEAL 23874 Query: 288 MLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAI 347 ++++GR T +GL+ + V NE+ G + + D +T++P +YAIGD+++ L A Sbjct: 23875 LVSVGRRPFTGGLGLDKINVAKNER-GFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAE 24051 Query: 348 QAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFW 407 G A+ + AG +Y +P ++T E + G SEE+ ++ + + Sbjct: 24052 DEGVACAE-ILAGKPGHVNYGVIPAVIYTMPEVASVGKSEEELKKEGVAYKVGKFPFNAN 24228 Query: 408 PLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDS 467 + + D + K++ + K +R++G H++ AGE+ A++ G + + + Sbjct: 24229 SRAKAVSTEDG---FVKVLVD-KATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGR 24396 Query: 468 TIGIHPVCAE 477 T HP +E Sbjct: 24397 TCHAHPTMSE 24426 >gb|AAHK01000124.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507089, whole genome shotgun sequence Length = 63491 Score = 140 bits (353), Expect = 5e-33 Identities = 110/430 (25%), Positives = 196/430 (45%), Gaps = 4/430 (0%) Frame = -3 Query: 52 RWGLGGTCVNVGCIPKK-LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIG 110 R LGGTC+NVGCIP K L+H L A YG E V D +M + + + Sbjct: 62322 RGTLGGTCLNVGCIPSKALLHATHLYHDAHASFARYGLMGGEGVTMDSAKMQQQKERAVK 62143 Query: 111 SLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLG- 169 L G ++ KV Y G F H I+ GK+++ ++ +IATG P L Sbjct: 62142 GLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPF 61963 Query: 170 IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGF 228 +P D++ +SS +LP P +V+G + LE A +G +VTV+ Sbjct: 61962 LPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTL 61783 Query: 229 DQDMANK-IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 287 D+D+ N +G + +KF+ + + G L V ++ E + + Sbjct: 61782 DEDVTNALVGALAKNEKMKFMTSTKVVGGK--NNGDSVSLEVEGKNGKRETL---TCEAL 61618 Query: 288 MLAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAI 347 ++++GR T +GL+ + NE+ G + + D +T++P +YAIGD+++ L A Sbjct: 61617 LVSVGRRPFTGGLGLDKINAAKNER-GFVKIGDHFETSIPDVYAIGDVVDKGPMLAHKAE 61441 Query: 348 QAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFW 407 G A+ + AG +Y +P ++T E + G SE++ ++ + + Sbjct: 61440 DEGVACAE-ILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNAN 61264 Query: 408 PLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDS 467 + + D + K++ + K +R++G H++ AGE+ A++ G + + + Sbjct: 61263 SRAKAVSTEDG---FVKVLVD-KATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGR 61096 Query: 468 TIGIHPVCAE 477 T HP +E Sbjct: 61095 TCHAHPTMSE 61066 >gb|AAHK01005091.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053484299, whole genome shotgun sequence Length = 1701 Score = 101 bits (251), Expect = 4e-21 Identities = 65/166 (39%), Positives = 86/166 (51%) Frame = -1 Query: 312 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVP 371 K G + V + +TNV IYAIGD+ ++V LTPVAI L ++ + K D+ V Sbjct: 1698 KNGGVQVDEYSRTNVSNIYAIGDVT-NRVMLTPVAINEAAALVDTVFGTNPRKTDHTRVA 1522 Query: 372 TTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKD 431 + VF+ G CGL EE A +++ E + VY S F PL I AKII N D Sbjct: 1521 SAVFSIPPIGTCGLIEEVASKRY--EVVAVYLSSFTPLMHNISGSKYKTFVAKIITNHSD 1348 Query: 432 NERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE 477 V+G H+LG NA E+ QG LK +TIG+HP AE Sbjct: 1347 GT-VLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAE 1213 >gb|AAHK01001129.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053507757, whole genome shotgun sequence Length = 16967 Score = 90.9 bits (224), Expect = 5e-18 Identities = 85/378 (22%), Positives = 158/378 (41%), Gaps = 17/378 (4%) Frame = -1 Query: 119 ALREKKVVYENAYGQFIGPHRIKATNNKGKE-KIYSAERFLIATGERPR-YLGIPGDKEY 176 ALR V F PH+++ N + KE +A+ F+IATG PR + + D++ Sbjct: 15011 ALRAANVSLMYGRAFFASPHQVEVRNRETKEYHAVTADYFIIATGSTPREHPYVKTDQKR 14832 Query: 177 CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMAN 234 ++SD+L +P P ++VG + E A A +G ++ ++ D D+ Sbjct: 14831 VVTSDELMMMP-LPKSMVIVGGGVLGSEFATIYARLGKTKVYLIDKEKCIMPKEDDDIVE 14655 Query: 235 KIGEHMEEHGIKFIRQFVPIKVEQIEAGTP------------GRLRVVAQSTNSEEIIEG 282 +I + ME HG+ + V ++ E +R + + EI Sbjct: 14654 RIQQSMENHGVVIHQDSVLYDMQSWEEDDAEMRAHPEDPTQRSGVRYSIMNRRTREIETY 14475 Query: 283 EYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTD-EEQTNVPYIYAIGDILEDKVE 341 E ++AIGR +GL G K+ E G + + + + +IYAIGD D + Sbjct: 14474 EVERALIAIGRKPNYIGLGLHNAGCKVRE--GALVLNPFGKCVDQDHIYAIGDAANDS-K 14304 Query: 342 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 401 L V GRL+ ++ + +F + + G++E++ + V Sbjct: 14303 LVSVGEAKGRLVVDHIFGVQQTSPLRHDFTRLIFLTIAVASVGMNEKECQR---QRISYV 14133 Query: 402 YHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLT 461 Y + L + DN + KI+ + ++G LG NA + + +AA++ + Sbjct: 14132 MAKYGFELCSRAVAADNTDGFVKILATNDSKKTLLGVRALGMNASTIIELASAAIRRNQS 13953 Query: 462 KKQLDSTIGIHPVCAEVF 479 +L + +P ++ F Sbjct: 13952 AYELSELLTAYPSVSQAF 13899 >gb|AAHK01001573.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053508933, whole genome shotgun sequence Length = 11317 Score = 90.1 bits (222), Expect = 8e-18 Identities = 85/378 (22%), Positives = 158/378 (41%), Gaps = 17/378 (4%) Frame = -1 Query: 119 ALREKKVVYENAYGQFIGPHRIKATNNKGKE-KIYSAERFLIATGERPR-YLGIPGDKEY 176 ALR V F PH+++ N + KE +A+ F+IATG P+ + + D++ Sbjct: 4735 ALRAANVSLMYGRAFFASPHQVEVRNRETKEYHAVTADYFIIATGSTPKEHPYVKTDQKR 4556 Query: 177 CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMV--RSILLRGFDQDMAN 234 ++SD+L +P P ++VG + E A A +G ++ ++ D D+ Sbjct: 4555 VVTSDELMMMP-LPKSMVIVGGGVLGSEFATIYARLGKTKVYLIDKEKCIMPKEDDDIVE 4379 Query: 235 KIGEHMEEHGIKFIRQFVPIKVEQIEAGTP------------GRLRVVAQSTNSEEIIEG 282 +I + ME HG+ + V ++ E +R + + EI Sbjct: 4378 RIQQSMENHGVVIHQDSVLYDMQSWEEDDAEMQAHPEDPTQRSGVRYSIMNRRTREIETY 4199 Query: 283 EYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVTD-EEQTNVPYIYAIGDILEDKVE 341 E ++AIGR +GL G K+ E G + + + + +IYAIGD D + Sbjct: 4198 EVERALIAIGRKPNYIGLGLYNAGCKVRE--GALVLNPFGKCVDQDHIYAIGDAANDS-K 4028 Query: 342 LTPVAIQAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 401 L V GRL+ ++ + +F + + G++E++ + V Sbjct: 4027 LVSVGEAKGRLVVDHIFGVQQTSPLRHDFTRLIFLTIAVASVGMNEKECQR---QRISYV 3857 Query: 402 YHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLT 461 Y + L + DN + KI+ + ++G LG NA + + +AA++ + Sbjct: 3856 MAKYGFELCSRAVAADNTDGFVKILATNDSKKTLLGVRALGMNASTIIELASAAIRRNQS 3677 Query: 462 KKQLDSTIGIHPVCAEVF 479 QL + +P ++ F Sbjct: 3676 AYQLSELLTAYPSVSQAF 3623 >gb|AAHK01002542.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053509379, whole genome shotgun sequence Length = 5439 Score = 82.4 bits (202), Expect = 2e-15 Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 12/376 (3%) Frame = +3 Query: 131 YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR-YLGIPGDKEYCISSDDLFSLPYC 189 YG F+ PH + G + A+ F+IA G +PR ++ + D + +SDD+ + + Sbjct: 1443 YGSFMSPHSVDVQLASGGTERVEADYFVIACGAQPRKHVSVTWDGKVVFTSDDIMNRAF- 1619 Query: 190 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKF 247 P +++GA + E A A G+ V V+ +S +L D D+A + + +E G+ F Sbjct: 1620 PKSIVIIGAGVIGCEFASIFANFGMTKVNVIEKSNRILPMEDDDVAEFVQKLLENKGVTF 1799 Query: 248 IRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGV 307 ++ +++ G+ ++ ++ + +++IGR+ +GLE +GV Sbjct: 1800 -HHHSALESNKVK---NGQFHYTLRNLIDNKLTTHIVDNALVSIGREPNLSGLGLENIGV 1967 Query: 308 KINEKTGKIPVTDEEQTN----VPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY----A 359 + + GK+ + +Q N +IYA GD+ K L V GR +Y Sbjct: 1968 GL--QRGKL---ERDQFNRVKPHKHIYACGDV-ATKFALVNVGELEGRSCIDHIYHPHPE 2129 Query: 360 GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHS-YFWPLEWTIPSRDN 418 G V+ +N+ T +F E A GL+E++ ++NI + Y + + N Sbjct: 2130 GEFVQ-RLDNLSTIMFLDQEVAAVGLNEQQC----RKQNIAYKMARYGYEFVARAVAMGN 2294 Query: 419 NKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 478 + + K+I +V+G +GP+A V + + A+ T L +P + Sbjct: 2295 TRGFVKLIVTNDREMQVLGVRAIGPHASSVIELASLAIHNKETLYNLSELRTAYPTVTQG 2474 Query: 479 FTTLSVTKRSGASILQ 494 F V G S+L+ Sbjct: 2475 FQE-CVNMLLGTSLLK 2519 >gb|AAHK01002373.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506701, whole genome shotgun sequence Length = 6170 Score = 80.1 bits (196), Expect = 9e-15 Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 12/376 (3%) Frame = +3 Query: 131 YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR-YLGIPGDKEYCISSDDLFSLPYC 189 YG F+ P + G + A+ F+IA G +PR ++ + D + +SDD+ + + Sbjct: 1719 YGSFMSPQSVDVQLASGGTERVEADYFVIACGAQPRKHVSVTWDGKVVFTSDDIMNRAF- 1895 Query: 190 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKF 247 P +++GA + E A A G+ V V+ +S +L D D+A + + +E G+ F Sbjct: 1896 PKSIVIIGAGVIGCEFASIFANFGMTKVNVIEKSNRILPMEDDDVAEFVQKLLENKGVTF 2075 Query: 248 IRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGV 307 ++ +++ G+ ++ ++ + +++IGR+ +GLE +GV Sbjct: 2076 -HHHSALESNKVK---NGQFHYTLRNLIDNKLTTHIVDNALVSIGREPNLSGLGLENIGV 2243 Query: 308 KINEKTGKIPVTDEEQTN----VPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY----A 359 I + GK+ + +Q N +IYA GD+ K L V GR +Y Sbjct: 2244 GI--QRGKL---ERDQFNRVKPHKHIYACGDV-ATKFALVNVGELEGRSCIDHIYHPHPE 2405 Query: 360 GSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHS-YFWPLEWTIPSRDN 418 G V+ +N+ T +F E A GL+E++ ++NI + Y + + N Sbjct: 2406 GEFVQ-RLDNLSTIMFLDQEVAAVGLNEQQC----RKQNIAYKMARYGYEFVARAVAMGN 2570 Query: 419 NKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 478 + + K+I +V+G +GP+A V + + A+ T L +P + Sbjct: 2571 TRGFVKLIVTNDREMQVLGVRAIGPHASSVIELASLAIHNKETLYNLSELRTAYPTVTQG 2750 Query: 479 FTTLSVTKRSGASILQ 494 F V G S+L+ Sbjct: 2751 FQE-CVNMLLGTSLLK 2795 >gb|AAHK01017682.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053487235, whole genome shotgun sequence Length = 947 Score = 43.5 bits (101), Expect = 0.001 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Frame = -3 Query: 119 ALREKKVVYENAYGQFIGPHRIKATNNKGKE-KIYSAERFLIATGERPR-YLGIPGDKEY 176 ALR V F PH+++ N + KE +A+ F+IATG P+ + + D++ Sbjct: 291 ALRAANVSLMYGRAFFASPHQVEVRNRETKEYHAVTADYFIIATGSTPKEHPYVKTDQKR 112 Query: 177 CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIG 213 ++SD+L +P P ++VG + E A A +G Sbjct: 111 VVTSDELMMMP-LPKSMVIVGGGVLGSEFATIYARLG 4 >gb|AAHK01000279.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053510565, whole genome shotgun sequence Length = 44251 Score = 33.1 bits (74), Expect = 1.2 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Frame = -2 Query: 59 CVNVGCIPKKLMHQAALLGQALQDSRNY-GWKVEETVKHDWDRMIEAVQNHIGSLNWGYR 117 C G K+ HQ LL Q + +++ E V H R+++AVQ H+ SL YR Sbjct: 43794 CQRTGFHTNKI-HQCELLLWVTQPFPVFLHFRLTECVLHRRQRVVQAVQQHLQSLLLQYR 43618 Query: 118 VALREK 123 +REK Sbjct: 43617 TLIREK 43600 >gb|AAHK01000740.1| Trypanosoma cruzi strain CL Brener tcruzi_1047053506145, whole genome shotgun sequence Length = 24783 Score = 30.8 bits (68), Expect = 6.0 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +1 Query: 88 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREK 123 +++ E V H RM++AVQ H+ SL R +REK Sbjct: 12754 FRLTECVLHRRQRMVQAVQQHLQSLLLQCRTLIREK 12861 Database: genome.fa Posted date: Jan 19, 2010 5:13 PM Number of letters in database: 89,612,356 Number of sequences in database: 32,746 Lambda K H 0.319 0.138 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,101,912 Number of Sequences: 32746 Number of extensions: 893586 Number of successful extensions: 3167 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2237 Number of HSP's successfully gapped in prelim test: 94 Number of HSP's that attempted gapping in prelim test: 602 Number of HSP's gapped (non-prelim): 2737 length of query: 499 length of database: 29,870,785 effective HSP length: 111 effective length of query: 388 effective length of database: 26,235,979 effective search space: 10179559852 effective search space used: 10179559852 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 66 (30.0 bits)