Command line: [exonerate -m p2g --showtargetgff -q PmarinusNCBI2.aa.fa -t crom2PmarinusVSAanopha.fa]
Hostname: [ws101133.aulescm.upf.edu]

C4 Alignment:
------------
         Query: gi|239865386|gb|EEQ98084.1| Thioredoxin reductase, putative [Perkinsus marinus ATCC 50983]
        Target: gi|126302409|gb|AAXJ01000096.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296754064, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 2771
   Query range: 0 -> 554
  Target range: 19951 -> 17644

     1 : MetValAsnGlyThrAlaSerSerPheLeuArgProGlyLeuValAlaAlaAlaGlyPro :    20
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         MetValAsnGlyThrAlaSerSerPheLeuArgProGlyLeuValAlaAlaAlaGlyPro
 19951 : ATGGTTAATGGAACTGCCTCATCGTTCCTACGGCCTGGCCTAGTAGCTGCTGCTGGACCA : 19894

    21 : AlaAlaAlaAlaValAlaAlaGlyAsnSerValAlaTrpMetSerThrAlaProProAsp :    40
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         AlaAlaAlaAlaValAlaAlaGlyAsnSerValAlaTrpMetSerThrAlaProProAsp
 19893 : GCTGCGGCCGCTGTGGCTGCCGGTAACAGTGTGGCATGGATGAGTACTGCACCCCCAGAT : 19834

    41 : HisPheAspTyrAspTyr  >>>> Target Intron 1 >>>>  ValValLeuGlyG :    51
         ||||||||||||||||||            91 bp            |||||||||||||
         HisPheAspTyrAspTyr++                         ++ValValLeuGlyG
 19833 : CATTTCGACTATGATTATgt.........................agGTAGTACTCGGAG : 19710

    52 : lyGlySerGlyGlyMetAlaSerAlaLysLysAlaAla  >>>> Target Intron 2 :    64
         ||||||||||||||||||||||||||||||||||||||            90 bp     
         lyGlySerGlyGlyMetAlaSerAlaLysLysAlaAla++                    
 19709 : GAGGTAGTGGTGGTATGGCTTCGGCTAAAAAGGCTGCGgt.................... : 19669

    65 :  >>>>  SerTyrGlyAlaSerThrLeuLeuCysAspPheValSerProSerIleThrAr :    81
                |||||||||||||||||||||||||||||||||||||||||||||||||||||
              ++SerTyrGlyAlaSerThrLeuLeuCysAspPheValSerProSerIleThrAr
 19668 : .....agTCATATGGTGCCTCAACCTTACTATGTGATTTTGTCTCACCTTCTATCACTCG : 19530

    82 : gGlyThrLysTrpGlyLeuGlyGlyThrCysValAsnValGlyCysIleProLysLysLe :   101
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         gGlyThrLysTrpGlyLeuGlyGlyThrCysValAsnValGlyCysIleProLysLysLe
 19529 : TGGAACCAAATGGGGTCTTGGTGGTACATGTGTTAATGTTGGCTGTATTCCGAAGAAGTT : 19470

   102 : uMetHisTyrThrGlyThrLeuGlu{G}  >>>> Target Intron 3 >>>>  {ly :   110
         |||||||||||||||||||||||||{|}            46 bp            {||
         uMetHisTyrThrGlyThrLeuGlu{G}++                         ++{ly
 19469 : AATGCATTATACTGGCACTTTGGAA{G}gt.........................ag{GC : 19396

   111 : }GlnLeuArgAspAlaLysGlnLeuGlyTyrThrGluIleProGluLysLysAlaGlyAs :   130
         }|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         }GlnLeuArgAspAlaLysGlnLeuGlyTyrThrGluIleProGluLysLysAlaGlyAs
 19395 : }CAATTACGTGATGCCAAGCAACTGGGTTATACTGAGATCCCCGAGAAGAAGGCTGGTGA : 19337

   131 : pHisTyrGlnHisAspTrpAsnThrMetValSerAspIleGlnMetTyrIleLysLysLe :   150
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         pHisTyrGlnHisAspTrpAsnThrMetValSerAspIleGlnMetTyrIleLysLysLe
 19336 : TCACTATCAACATGACTGGAACACAATGGTTTCGGACATACAGATGTATATCAAGAAACT : 19277

   151 : uAsnPheMetTyrArgThrGlyLeuArgAsnGlyGly  >>>> Target Intron 4  :   163
         |||||||||||||||||||||||||||||||||||||            50 bp      
         uAsnPheMetTyrArgThrGlyLeuArgAsnGlyGly++                     
 19276 : CAATTTCATGTATAGGACAGGCCTGAGGAACGGAGGGgt..................... : 19236

   164 : >>>>  ValGluTyrGluAsnAlaTrpGlyCysPheAspProGluAlaGlyProHisThr :   180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||
             ++ValGluTyrGluAsnAlaTrpGlyCysPheAspProGluAlaGlyProHisThr
 19235 : ....agGTCGAATATGAGAATGCCTGGGGATGCTTTGACCCTGAGGCTGGTCCACACACT : 19137

   181 : ValLysLeuThrAsnLysLysGlyGluValArgThrValThrAlaLysAsnValLeuVal :   200
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ValLysLeuThrAsnLysLysGlyGluValArgThrValThrAlaLysAsnValLeuVal
 19136 : GTTAAGCTTACCAACAAGAAGGGAGAGGTTCGAACAGTTACTGCTAAGAACGTACTCGTT : 19077

   201 : AlaThrGlyGlyArgProArgIleLeuAspIleProGly{A}  >>>> Target Intr :   214
         |||||||||||||||||||||||||||||||||||||||{|}            52 bp 
         AlaThrGlyGlyArgProArgIleLeuAspIleProGly{A}++                
 19076 : GCAACTGGTGGCAGGCCTCGAATTCTGGATATCCCTGGA{G}gt................ : 19032

   215 : on 5 >>>>  {la}ArgGluTyrGlyIleThrSerAspAspLeuPheSerLeuHisThr :   229
                    {||}|||||||||||||||||||||||||||||||||||||||||||||
                  ++{la}ArgGluTyrGlyIleThrSerAspAspLeuPheSerLeuHisThr
 19031 : .........ag{CT}CGGGAGTATGGTATCACCTCGGATGATCTATTCTCTCTCCATACA : 18938

   230 : ProProGlyLysThrLeuValIleGlySerArgTyrIleAlaLeuGlu{C}  >>>> Ta :   246
         ||||||||||||||||||||||||||||||||||||||||||||||||{|}         
         ProProGlyLysThrLeuValIleGlySerArgTyrIleAlaLeuGlu{C}++       
 18937 : CCACCAGGAAAGACTTTGGTAATCGGTTCCCGATACATTGCTCTTGAG{T}gt....... : 18884

   247 : rget Intron 6 >>>>  {ys}AlaGlyPheLeuThrGluLeuGlyTyrAspThrThr :   258
            57 bp            {||}||||||||||||||||||||||||||||||||||||
                           ++{ys}AlaGlyPheLeuThrGluLeuGlyTyrAspThrThr
 18883 : ..................ag{GT}GCTGGGTTCCTTACGGAACTAGGTTACGATACCACC : 18794

   259 : ValSerValArgSerAspLysValLeuLysAsnPheAspGlnAspMetAlaAsnLysVal :   278
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         ValSerValArgSerAspLysValLeuLysAsnPheAspGlnAspMetAlaAsnLysVal
 18793 : GTCTCTGTGAGATCTGACAAGGTGTTGAAGAACTTCGATCAGGACATGGCCAACAAGGTG : 18734

   279 : LysSerValMetGlnGluLeu{G}  >>>> Target Intron 7 >>>>  {ly}Thr :   287
         |||||||||||||||||||||{|}            52 bp            {||}|||
         LysSerValMetGlnGluLeu{G}++                         ++{ly}Thr
 18733 : AAGTCCGTGATGCAAGAACTG{G}gt.........................ag{GT}ACC : 18655

   288 : LysPheLeuMetGluSerGluProValSerLeuThrLysGluAlaThrGluGlySerArg :   307
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LysPheLeuMetGluSerGluProValSerLeuThrLysGluAlaThrGluGlySerArg
 18654 : AAGTTTCTCATGGAATCAGAGCCGGTTTCACTCACTAAAGAGGCCACTGAGGGCTCTCGC : 18595

   308 : IleValValLysPheGluAspGlyThrSerAspGluTyrAspThrValLeuPheAlaThr :   327
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         IleValValLysPheGluAspGlyThrSerAspGluTyrAspThrValLeuPheAlaThr
 18594 : ATAGTCGTCAAATTCGAAGACGGAACGAGTGATGAATATGATACTGTTCTCTTTGCGACT : 18535

   328 : GlyArgThrProSerThrAlaAsnLeuGlyLeuProSerGluAlaPheAlaSerProThr :   347
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         GlyArgThrProSerThrAlaAsnLeuGlyLeuProSerGluAlaPheAlaSerProThr
 18534 : GGACGAACCCCATCTACCGCCAATCTCGGCCTACCATCCGAAGCTTTCGCGAGTCCGACT : 18475

   348 : SerAlaLysLeuIleValAspGluLysAsnLeuValArg{G}  >>>> Target Intr :   361
         |||||||||||||||||||||||||||||||||||||||{|}            47 bp 
         SerAlaLysLeuIleValAspGluLysAsnLeuValArg{G}++                
 18474 : AGTGCCAAGCTCATAGTGGATGAGAAGAACTTGGTTAGA{G}gt................ : 18430

   362 : on 8 >>>>  {ly}ThrProCysValTyrAlaValGlyAspValLeuLysGlyLysPro :   376
                    {||}|||||||||||||||||||||||||||||||||||||||||||||
                  ++{ly}ThrProCysValTyrAlaValGlyAspValLeuLysGlyLysPro
 18429 : .........ag{GT}ACACCCTGTGTTTACGCTGTTGGTGATGTTCTCAAGGGAAAACCT : 18341

   377 : GluLeuThrProValAlaValLysAspGlyGluLeuLeuAlaAspArgLeuPheGlyGly :   396
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         GluLeuThrProValAlaValLysAspGlyGluLeuLeuAlaAspArgLeuPheGlyGly
 18340 : GAGTTGACTCCTGTAGCTGTCAAGGATGGAGAGTTGCTTGCCGATCGGTTATTCGGTGGC : 18281

   397 : LysThrLysLeuMetAspTyrSerGlyIleProThrThrValPheThrProAlaGluTyr :   416
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LysThrLysLeuMetAspTyrSerGlyIleProThrThrValPheThrProAlaGluTyr
 18280 : AAGACCAAGCTCATGGACTACAGCGGCATTCCTACTACGGTTTTCACACCTGCCGAGTAC : 18221

   417 : SerHisValGlyMetSerGluGluGlu  >>>> Target Intron 9 >>>>  AlaL :   427
         |||||||||||||||||||||||||||            53 bp            ||||
         SerHisValGlyMetSerGluGluGlu++                         ++AlaL
 18220 : TCCCATGTTGGTATGAGCGAGGAGGAAgt.........................agGCTC : 18135

   428 : euLysGluTyrArgGlnAspGluIleGluCysTyrMetTyrSerTrpGlySerLeuGluL :   447
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         euLysGluTyrArgGlnAspGluIleGluCysTyrMetTyrSerTrpGlySerLeuGluL
 18134 : TGAAGGAGTATCGTCAAGATGAAATAGAGTGCTACATGTATAGTTGGGGATCCCTCGAGT : 18075

   448 : euSerValThrHisArgProLysValProSerAlaMet  >>>> Target Intron 1 :   460
         ||||||||||||||||||||||||||||||||||||||             52 bp    
         euSerValThrHisArgProLysValProSerAlaMet++                    
 18074 : TATCTGTAACCCATAGGCCGAAGGTCCCGTCTGCTATGgt.................... : 18034

   461 : 0 >>>>  AlaAsnGluPheAspGluGluMetSerProAsnCysMetCysLysIleValV :   477
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||
               ++AlaAsnGluPheAspGluGluMetSerProAsnCysMetCysLysIleValV
 18033 : ......agGCTAATGAGTTCGATGAGGAGATGTCCCCGAACTGTATGTGTAAGATCGTTG : 17933

   478 : alHisGluProAspGluLysValLeuGlyPheHisTyrIleGlyProAlaAlaGlyGluV :   497
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         alHisGluProAspGluLysValLeuGlyPheHisTyrIleGlyProAlaAlaGlyGluV
 17932 : TCCATGAGCCCGATGAGAAGGTTTTGGGATTCCATTACATTGGTCCCGCTGCTGGTGAAG : 17873

   498 : alIleHisGlyPheAlaIleAlaPheLysMetGlyLeuThrLysAlaGlnIleGluAsp  :   517
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
         alIleHisGlyPheAlaIleAlaPheLysMetGlyLeuThrLysAlaGlnIleGluAsp+
 17872 : TCATTCATGGCTTCGCTATTGCATTCAAGATGGGCTTGACGAAGGCCCAGATCGAAGATg : 17813

   518 :  >>>> Target Intron 11 >>>>  IleValGlyValHisProThrAspCysGluA :   527
                     55 bp            |||||||||||||||||||||||||||||||
         +                          ++IleValGlyValHisProThrAspCysGluA
 17812 : t..........................agATTGTCGGTGTTCATCCTACCGATTGCGAAG : 17728

   528 : laValIleGlnGlnMetAspIleThrLysSerSerGlyGluSerTyrValSerSerGlyG :   547
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         laValIleGlnGlnMetAspIleThrLysSerSerGlyGluSerTyrValSerSerGlyG
 17727 : CAGTCATTCAACAAATGGATATCACGAAGTCTAGTGGTGAGAGCTACGTATCATCTGGAG : 17668

   548 : lyCysGlyGlyGlyLysCysGly :   554
         |||||||||||||||||||||||
         lyCysGlyGlyGlyLysCysGly
 17667 : GCTGCGGTGGTGGCAAGTGTGGA : 17645

vulgar: gi|239865386|gb|EEQ98084.1| 0 554 . gi|126302409|gb|AAXJ01000096.1| 19951 17644 - 2771 M 46 138 5 0 2 I 0 87 3 0 2 M 17 51 5 0 2 I 0 86 3 0 2 M 46 138 S 0 1 5 0 2 I 0 42 3 0 2 S 1 2 M 52 156 5 0 2 I 0 46 3 0 2 M 51 153 S 0 1 5 0 2 I 0 48 3 0 2 S 1 2 M 31 93 S 0 1 5 0 2 I 0 53 3 0 2 S 1 2 M 39 117 S 0 1 5 0 2 I 0 48 3 0 2 S 1 2 M 74 222 S 0 1 5 0 2 I 0 43 3 0 2 S 1 2 M 64 192 5 0 2 I 0 49 3 0 2 M 34 102 5 0 2 I 0 48 3 0 2 M 57 171 5 0 2 I 0 51 3 0 2 M 38 114
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2010-03-11
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	gene	17645	19951	2771	-	.	gene_id 1 ; sequence gi|239865386|gb|EEQ98084.1| ; gene_orientation +
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	19814	19951	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	19814	19951	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	19812	19813	.	-	.	intron_id 1 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	19723	19813	.	-	.	intron_id 1
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	19723	19724	.	-	.	intron_id 0 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	19672	19722	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	19672	19722	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	19670	19671	.	-	.	intron_id 2 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	19582	19671	.	-	.	intron_id 2
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	19582	19583	.	-	.	intron_id 1 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	19443	19581	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	19443	19581	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	19441	19442	.	-	.	intron_id 3 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	19397	19442	.	-	.	intron_id 3
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	19397	19398	.	-	.	intron_id 2 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	19239	19396	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	19239	19396	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	19237	19238	.	-	.	intron_id 4 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	19189	19238	.	-	.	intron_id 4
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	19189	19190	.	-	.	intron_id 3 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	19035	19188	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	19035	19188	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	19033	19034	.	-	.	intron_id 5 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	18983	19034	.	-	.	intron_id 5
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	18983	18984	.	-	.	intron_id 4 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	18887	18982	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	18887	18982	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	18885	18886	.	-	.	intron_id 6 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	18830	18886	.	-	.	intron_id 6
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	18830	18831	.	-	.	intron_id 5 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	18710	18829	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	18710	18829	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	18708	18709	.	-	.	intron_id 7 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	18658	18709	.	-	.	intron_id 7
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	18658	18659	.	-	.	intron_id 6 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	18433	18657	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	18433	18657	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	18431	18432	.	-	.	intron_id 8 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	18386	18432	.	-	.	intron_id 8
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	18386	18387	.	-	.	intron_id 7 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	18192	18385	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	18192	18385	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	18190	18191	.	-	.	intron_id 9 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	18139	18191	.	-	.	intron_id 9
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	18139	18140	.	-	.	intron_id 8 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	18037	18138	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	18037	18138	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	18035	18036	.	-	.	intron_id 10 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	17985	18036	.	-	.	intron_id 10
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	17985	17986	.	-	.	intron_id 9 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	17814	17984	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	17814	17984	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice5	17812	17813	.	-	.	intron_id 11 ; splice_site "GT"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	intron	17759	17813	.	-	.	intron_id 11
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	splice3	17759	17760	.	-	.	intron_id 10 ; splice_site "AG"
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	cds	17645	17758	.	-	.	
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	exon	17645	17758	.	-	.	insertions 0 ; deletions 0
gi|126302409|gb|AAXJ01000096.1|	exonerate:protein2genome:local	similarity	17645	19951	2771	-	.	alignment_id 1 ; Query gi|239865386|gb|EEQ98084.1| ; Align 19952 1 138 ; Align 19723 47 51 ; Align 19582 64 138 ; Align 19395 111 156 ; Align 19189 163 153 ; Align 18981 215 93 ; Align 18828 247 117 ; Align 18656 287 222 ; Align 18384 362 192 ; Align 18139 426 102 ; Align 17985 460 171 ; Align 17759 517 114
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis
