CLUSTAL FORMAT for T-COFFEE Version_7.54 [http://www.tcoffee.org] [MODE:  ], CPU=0.19 sec, SCORE=92, Nseq=2, Len=561 

TR.Perkinsus_marinus.2  MVNGTASSFLRPGLVAAAGPAAAAVAAGNSVAWMSTAPPDHFDYDYVVLGGGSGGMASAK
TR1                     ----------------------------------------GFDYDVVVVGGGSGGLACSK
                                                                 **** **:******:*.:*

TR.Perkinsus_marinus.2  KAASYGASTLLCDFVSPSITRGTKWGLGGTCVNVGCIPKKLMHYTGTLEGQLR-DAKQLG
TR1                     ECAKLGAKVAVLDFVKPSP-AGSTWGLGGTCVNVGCIPKKLMHTASIIGETLKDDAAAFG
                        :.*. **.. : ***.**   *:.******************* :. :   *: **  :*

TR.Perkinsus_marinus.2  YTEIPEKKAGDHYQHDWNTMVSDIQMYIKKLNFMYRTGLRNGGVEYENAWGCFDPEAGPH
TR1                     WKDA---AAG---AHDWESMKSTVQDHIKSLNFKYRVALREAGITYLNRLGEFEDK---N
                        :.:     **    ***::* * :* :**.*** **..**:.*: * *  * *: :   :

TR.Perkinsus_marinus.2  TVKLTNKKGEVRTVTAKNVLVATGGRPRILDIPGAREYGITSDDLFSLHTPPGKTLVIGS
TR1                     TISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPGG-EHAIDSDDLFSLPKAPGRVLCVGG
                        *:.**:***:  :*** ..:**.****. *. **. *:.* ******* ..**:.* :*.

TR.Perkinsus_marinus.2  RYIALECAGFLTELGYDTTVSVRSDKVLKNFDQDMANKVKSVMQELGTKFLMESEPVSLT
TR1                     GYIALECGGFTAGMGYPTTCMVRS-ILLRGFDRECVGKIEAHIKHHGVQLQVGVTPAKIE
                         ******.** : :** **  ***  :*:.**:: ..*::: ::. *.:: :   *..: 

TR.Perkinsus_marinus.2  KEATEGSRIVVKFEDGTSDEYDTVLFATGRTPSTANLGLPSEAFASP----TSAKL-IVD
TR1                     KDAATGVLTVT-DSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAKTKKLECVD
                        *:*: *   *.  ..*  .******.**** ..** **: . . **.    .: **  **

TR.Perkinsus_marinus.2  EKNLVRGTPCVYAVGDVLKGKPELTPVAVKDGELLADRLFGGKTKLMDYSGIPTTVFTPA
TR1                     EQ--LPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPMDYECVATTIFTPL
                        *:  : *:* ***:***::*:*******:: *  ** *******: ***. :.**:*** 

TR.Perkinsus_marinus.2  EYSHVGMSEEEALKEYRQDEIECYMYSWGSLELSVTHRPKVPSAMANEFDEEMSPNCMCK
TR1                     EYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALS-----------ETRSERGDGCFAK
                        **. :*:**::*  :  : ::*.*: .:..** :::           *  .* . .*:.*

TR.Perkinsus_marinus.2  IVVHEPDEKVLGFHYIGPAAGEVIHGFAIAFKMGLTKAQIEDIVGVHPTDCEAVIQQMDI
TR1                     LVVDKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEF-TSMTV
                        :**.:.  **:****:** ***: :**:**:: * * *:: . **:*** .* .  .* :

TR.Perkinsus_marinus.2  TKSSGESYVSSGGCGGGKCG-
TR1                     TKSSGESAAK------GGCXG
                        ******* ..      * *  



