CLUSTAL FORMAT for T-COFFEE Version_7.54 [http://www.tcoffee.org] [MODE:  ], CPU=0.16 sec, SCORE=93, Nseq=2, Len=506 

TR.Perkinsus_marinus.1  MPDPAESVYDWDLFVIGGGSGGLAAAKTAAALGARVALADFVKPSPQGTTWGLGGTCVNV
TR1                     -------GFDYDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNV
                                :*:*:.*:********.:* .* ***:**: ******* *:***********

TR.Perkinsus_marinus.1  GCIPKKLLHMSAHTAETAG-DSAGLGWELTA--SHNWEAMIQNVTTYISSLNWGYKSELR
TR1                     GCIPKKLMHTASIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRVALR
                        *******:* ::  .**   *:*.:**: :*  :*:**:* ..*  :*.***: *:  **

TR.Perkinsus_marinus.1  STNVKYFNSFATFIDRNTLKLTDKRGKESIVTARYILIATGGRPNLGGYPGAGECCITSD
TR1                     EAGITYLNRLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPG-GEHAIDSD
                        .:.:.*:* :. * *:**:.****:*::: ***  :::*.*****  * ** ** .* **

TR.Perkinsus_marinus.1  DIFRRKAPPGKTLVVGASYIALECAGFIAGFGYDTTVMVRSILLRGFDQDMAQRIGKYME
TR1                     DLFSLPKAPGRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIK
                        *:*    .**:.* **..******.** **:** ** ***********:: . :*  :::

TR.Perkinsus_marinus.1  LHGTKFVHEMIPTKFEKTEDGKVRVYAKSSSDTMSDADSEFGVFDTVLMAVGRTGCAGWL
TR1                     HHGVQLQVGVTPAKIEKDA--------ATGVLTVTDSGGGVHEYDTVLVATGRYADTAAL
                         **.::   : *:*:**           :.  *::*:.. .  :****:*.** . :. *

TR.Perkinsus_marinus.1  SLDN---AGVHYNPDKGKIPVDKFEMTNIDNIYAIGDVVEGMLELTPVAIQSGKMLAARL
TR1                     GIDNVPGASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRL
                        .:**   *..: *... *:   . ::..  ::*********  *******::*  ** **

TR.Perkinsus_marinus.1  FGGASRLMDYHNVPTTVFTPIEYGSVGSSEENAKEEYGD-DLIVYHSFFKPLLWALNKDR
TR1                     FGGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETR
                        *** :. ***. *.**:***:***::* **::** : *: ::  * * * ** :**.: *

TR.Perkinsus_marinus.1  GDA--DCYMKVLCENKGDKKVVGIHILGPDAGEMIQGLAVAMKAGCTKANLDDTVGIHPT
TR1                     SERGDGCFAKLVV-DKSTGKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPT
                        .:   .*: *::  :*.  ****:* ***:***: **:::**: *.* *:: .*******

TR.Perkinsus_marinus.1  CAETFTTLTQIKEDGQDATVGGSCUG
TR1                     VAEEFTSMTVTKSSGESAAKGG-CUG
                         ** **::*  *..*:.*: ** ***



