These options control formatting of alignments in results pages. The default is HTML, but other formats (including plain text) are available. PSSM and PssmWithParameters are representations of Position Specific Scoring Matrices and are only available for PSI-BLAST. The Advanced view option allows the database descriptions to be sorted by various indices in a table. more...
Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
Show only sequences from the given organism.
Show only those sequences that match the given Entrez query. more...
Show only sequences with expect values in the given range. more...
Your BLAST job specified more than one input sequence. This box lets you choose which input sequence to show BLAST results for.
An overview of the database sequences aligned to the query sequence is shown. The score of each alignment is indicated by one of five different colors, which divides the range of scores into five groups. Multiple alignments on the same database sequence are connected by a striped line. Mousing over a hit sequence causes the definition and score to be shown in the window at the top, clicking on a hit sequence takes the user to the associated alignments. New: This graphic is an overview of database sequences aligned to the query sequence. Alignments are color-coded by score, within one of five score ranges. Multiple alignments on the same database sequence are connected by a dashed line. Mousing over an alignment shows the alignment definition and score in the box at the top. Clicking an alignment displays the alignment detail.
Score E Sequences producing significant alignments: (Bits) Value ref|XP_001898122.1| selT/selW/selH selenoprotein domain conta... 62.4 1e-08 ref|XP_001968753.1| GG25041 [Drosophila erecta] >gb|EDV57812.... 57.8 3e-07 ref|XP_001962980.1| GF15710 [Drosophila ananassae] >gb|EDV322... 57.8 3e-07 ref|XP_002189278.1| PREDICTED: putative selenoprotein T varia... 57.4 3e-07 ref|XP_854512.1| PREDICTED: similar to selenoprotein T [Canis... 57.4 3e-07 gb|AAH09611.2| Selenoprotein T [Homo sapiens] 57.4 4e-07 gb|AAF13696.1|AF195141_1 selenoprotein T [Homo sapiens] >dbj|... 57.4 4e-07 emb|CAJ82896.1| selenoprotein T (SELT) [Xenopus tropicalis] 57.4 4e-07 ref|NP_001006557.3| selenoprotein T [Gallus gallus] >sp|Q5ZJN... 57.4 4e-07 ref|NP_001014275.2| selenoprotein T [Rattus norvegicus] >ref|... 57.4 4e-07 ref|NP_057359.2| selenoprotein T [Homo sapiens] >sp|P62341.2|... 57.4 4e-07 ref|NP_001096573.2| selenoprotein T [Bos taurus] >sp|A6QP01.2... 57.0 4e-07 ref|NP_001079506.1| similar to selenoprotein T [Xenopus laevi... 57.0 5e-07 gb|AAH59764.1| Selenoprotein T [Xenopus tropicalis] >emb|CAJ8... 57.0 5e-07 ref|NP_608897.1| CG3887 [Drosophila melanogaster] >sp|Q9VMV6.... 56.6 6e-07 ref|NP_988868.2| selenoprotein T [Xenopus (Silurana) tropical... 56.6 7e-07 ref|XP_002067183.1| GK24855 [Drosophila willistoni] >gb|EDW78... 56.2 8e-07 ref|NP_840077.3| selenoprotein T, 1b [Danio rerio] >sp|Q6PHY8... 55.8 1e-06 gb|AAO86700.1| selenoprotein T1b [Danio rerio] 55.8 1e-06 gb|AAH53147.2| Selenoprotein T, 1b [Danio rerio] 55.8 1e-06 dbj|BAG62067.1| unnamed protein product [Homo sapiens] 55.8 1e-06 gb|AAP06313.1| similar to GenBank Accession Number AE003608 p... 55.5 1e-06 emb|CAB01684.2| C. elegans protein C35C5.3a, confirmed by tra... 55.5 1e-06 sp|Q9U3N5.2|SELT1_CAEEL RecName: Full=Putative selT-like prot... 55.5 1e-06 ref|NP_509930.1| hypothetical protein C35C5.3 [Caenorhabditis... 55.5 1e-06 ref|NP_509929.1| hypothetical protein C35C5.3 [Caenorhabditis... 55.5 1e-06 ref|XP_002037900.1| GM18515 [Drosophila sechellia] >gb|EDW543... 55.1 2e-06 ref|NP_001079587.1| similar to selenoprotein T [Xenopus laevi... 55.1 2e-06 ref|XP_002088687.1| GE11298 [Drosophila yakuba] >gb|EDW88399.... 54.7 3e-06 sp|Q9BN19.1|HSP6_HETGL RecName: Full=Putative esophageal glan... 54.3 3e-06 ref|XP_002299800.1| predicted protein [Populus trichocarpa] >... 54.3 3e-06 ref|XP_001989009.1| GH11481 [Drosophila grimshawi] >gb|EDW038... 53.9 4e-06 ref|XP_001355955.1| GA17753 [Drosophila pseudoobscura pseudoo... 53.9 4e-06 emb|CAG07644.1| unnamed protein product [Tetraodon nigroviridis] 53.5 5e-06 ref|XP_001675978.1| Hypothetical protein CBG17303 [Caenorhabd... 53.5 6e-06 ref|NP_840075.2| selenoprotein T, 1a [Danio rerio] 52.8 9e-06 sp|Q802F2.3|SELTA_DANRE RecName: Full=Selenoprotein T1a; Flag... 52.8 9e-06 ref|XP_002051846.1| GJ17222 [Drosophila virilis] >gb|EDW64001... 52.8 1e-05 gb|AAO65273.1| selenoprotein T1a [Danio rerio] >gb|AAH54578.2... 52.4 1e-05 ref|XP_002001672.1| GI16976 [Drosophila mojavensis] >gb|EDW11... 52.4 1e-05 ref|XP_001914728.1| PREDICTED: similar to Selenoprotein T [Eq... 51.6 2e-05 ref|XP_002218190.1| hypothetical protein BRAFLDRAFT_80438 [Br... 51.2 2e-05 ref|XP_001622940.1| predicted protein [Nematostella vectensis... 51.2 2e-05 ref|XP_001689814.1| selenoprotein T [Chlamydomonas reinhardti... 51.2 3e-05 ref|XP_002216685.1| hypothetical protein BRAFLDRAFT_79001 [Br... 51.2 3e-05 ref|XP_001658760.1| hypothetical protein AaeL_AAEL007944 [Aed... 50.4 4e-05 ref|XP_002164145.1| PREDICTED: similar to selenoprotein T, 1a... 50.4 4e-05 gb|ABG54379.1| selenoprotein T 1a [Danio rerio] 50.1 5e-05 ref|XP_001951959.1| PREDICTED: similar to SelT-like protein [... 49.3 1e-04 ref|XP_001606559.1| PREDICTED: similar to conserved hypotheti... 49.3 1e-04 gb|EEC08399.1| hypothetical protein IscW_ISCW006093 [Ixodes s... 48.9 1e-04 ref|XP_001846674.1| selenoprotein T [Culex quinquefasciatus] ... 48.9 1e-04 ref|NP_505741.2| hypothetical protein F28H7.4 [Caenorhabditis... 48.5 2e-04 sp|Q19892|SELT2_CAEEL Putative selT-like protein F28H7.4 prec... 48.5 2e-04 ref|XP_001416767.1| predicted protein [Ostreococcus lucimarin... 48.1 2e-04 ref|XP_319979.4| AGAP009202-PA [Anopheles gambiae str. PEST] ... 47.8 3e-04 ref|XP_974477.1| PREDICTED: similar to selenoprotein T [Tribo... 47.4 4e-04 ref|XP_002115661.1| hypothetical protein TRIADDRAFT_29882 [Tr... 46.6 6e-04 emb|CAF93101.1| unnamed protein product [Tetraodon nigroviridis] 46.2 8e-04 ref|XP_976618.1| selT/selW/selH selenoprotein domain containi... 46.2 8e-04 ref|NP_001091957.2| selenoprotein T, 2 [Danio rerio] >sp|Q502... 46.2 8e-04 ref|XP_808538.1| hypothetical protein [Trypanosoma cruzi stra... 45.4 0.001 ref|XP_002314095.1| predicted protein [Populus trichocarpa] >... 44.3 0.003 emb|CAL53127.1| MGC53828 protein (ISS) [Ostreococcus tauri] 43.9 0.004 ref|NP_001130058.1| hypothetical protein LOC100191150 [Zea ma... 43.1 0.007 emb|CAO50132.1| unnamed protein product [Vitis vinifera] 43.1 0.008 emb|CAN83419.1| hypothetical protein [Vitis vinifera] 43.1 0.008 gb|EEB11815.1| conserved hypothetical protein [Pediculus huma... 42.0 0.014 ref|NP_001032096.1| selenoprotein-related [Arabidopsis thaliana] 42.0 0.015 ref|NP_200672.1| selenoprotein-related [Arabidopsis thaliana]... 42.0 0.016 ref|XP_002287456.1| predicted protein [Thalassiosira pseudona... 41.6 0.019 ref|NP_190314.2| SELT (SELT-LIKE PROTEIN PRECURSOR); selenium... 41.6 0.020 gb|EEF30277.1| Selenoprotein T precursor, putative [Ricinus c... 41.2 0.024 gb|EEC79375.1| hypothetical protein OsI_20274 [Oryza sativa I... 41.2 0.030 ref|NP_001055791.1| Os05g0467300 [Oryza sativa (japonica cult... 40.8 0.033 dbj|BAD43801.1| putative protein [Arabidopsis thaliana] 40.8 0.033 gb|EEE64025.1| hypothetical protein OsJ_18854 [Oryza sativa J... 40.8 0.034 ref|XP_002322986.1| predicted protein [Populus trichocarpa] >... 40.8 0.037 gb|ABK95408.1| unknown [Populus trichocarpa] 40.4 0.044 gb|EEE55626.1| hypothetical protein OsJ_03966 [Oryza sativa J... 39.7 0.073 gb|ACG43077.1| selT-like protein precursor [Zea mays] >gb|ACN... 39.7 0.079 gb|EAY76380.1| hypothetical protein OsI_04310 [Oryza sativa I... 39.7 0.090 dbj|BAB89601.1| unknown protein [Oryza sativa Japonica Group]... 38.9 0.14 gb|ABK21412.1| unknown [Picea sitchensis] 37.7 0.27 ref|XP_808696.1| hypothetical protein [Trypanosoma cruzi stra... 35.8 1.1 ref|XP_002142393.1| hypothetical protein [Cryptosporidium mur... 35.0 1.8 ref|XP_665097.1| CG3887-PA [Cryptosporidium hominis TU502] >g... 35.0 2.1 ref|XP_625982.1| hypothetical protein [Cryptosporidium parvum... 35.0 2.2 ref|XP_001776145.1| predicted protein [Physcomitrella patens ... 34.3 3.5 ref|XP_002182894.1| predicted protein [Phaeodactylum tricornu... 33.1 6.9 gb|ABI34506.1| PR domain containing 14 [Danio rerio] 33.1 7.4 gb|EEB02729.1| major facilitator superfamily domain-containin... 33.1 8.4