These options control formatting of alignments in results pages. The default is HTML, but other formats (including plain text) are available. PSSM and PssmWithParameters are representations of Position Specific Scoring Matrices and are only available for PSI-BLAST. The Advanced view option allows the database descriptions to be sorted by various indices in a table. more...
Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
Show only sequences from the given organism.
Show only those sequences that match the given Entrez query. more...
Show only sequences with expect values in the given range. more...
Your BLAST job specified more than one input sequence. This box lets you choose which input sequence to show BLAST results for.
An overview of the database sequences aligned to the query sequence is shown. The score of each alignment is indicated by one of five different colors, which divides the range of scores into five groups. Multiple alignments on the same database sequence are connected by a striped line. Mousing over a hit sequence causes the definition and score to be shown in the window at the top, clicking on a hit sequence takes the user to the associated alignments. New: This graphic is an overview of database sequences aligned to the query sequence. Alignments are color-coded by score, within one of five score ranges. Multiple alignments on the same database sequence are connected by a dashed line. Mousing over an alignment shows the alignment definition and score in the box at the top. Clicking an alignment displays the alignment detail.
Score E Sequences producing significant alignments: (Bits) Value ref|XP_001556393.1| hypothetical protein BC1G_05011 [Botryoti... 100 4e-20 ref|XP_001780494.1| predicted protein [Physcomitrella patens ... 98.6 1e-19 ref|XP_001596222.1| hypothetical protein SS1G_02439 [Scleroti... 98.6 1e-19 ref|NP_567271.1| methionine sulfoxide reductase domain-contai... 98.2 2e-19 gb|EED56379.1| methionine-R-sulfoxide reductase SelR, putativ... 98.2 2e-19 ref|XP_957530.1| peptide methionine sulfoxide reductase msrB ... 97.8 2e-19 gb|EEC79201.1| hypothetical protein OsI_19915 [Oryza sativa I... 97.8 3e-19 ref|NP_001055501.1| Os05g0404200 [Oryza sativa (japonica cult... 97.8 3e-19 ref|XP_389676.1| hypothetical protein FG09500.1 [Gibberella z... 97.8 3e-19 gb|AAD03449.1| contains similarity to Methanobacterium thermo... 97.4 3e-19 ref|NP_567639.1| MSRB2 (METHIONINE SULFOXIDE REDUCTASE B 2); ... 97.4 3e-19 gb|ABU49226.1| chloroplast methionine sulfoxide reductase B2 ... 97.4 3e-19 emb|CAB80845.1| putative protein [Arabidopsis thaliana] >gb|A... 97.4 3e-19 ref|XP_001771926.1| predicted protein [Physcomitrella patens ... 97.4 3e-19 ref|XP_001906135.1| unnamed protein product [Podospora anseri... 97.1 4e-19 gb|AAM62876.1| unknown [Arabidopsis thaliana] 97.1 4e-19 ref|XP_001394265.1| hypothetical protein An11g02640 [Aspergil... 97.1 5e-19 ref|XP_001268025.1| methionine-R-sulfoxide reductase SelR, pu... 96.7 5e-19 gb|EEE63677.1| hypothetical protein OsJ_18495 [Oryza sativa J... 96.3 7e-19 ref|XP_365794.1| conserved hypothetical protein [Magnaporthe ... 96.3 8e-19 ref|XP_001215055.1| peptide methionine sulfoxide reductase ms... 96.3 8e-19 gb|AAO72582.1| unknown [Oryza sativa (japonica cultivar-group)] 95.5 1e-18 ref|XP_001802583.1| hypothetical protein SNOG_12361 [Phaeosph... 95.5 1e-18 ref|XP_750675.2| methionine-R-sulfoxide reductase SelR [Asper... 95.5 1e-18 ref|XP_002265129.1| PREDICTED: hypothetical protein [Vitis vi... 95.5 1e-18 ref|NP_192392.1| methionine sulfoxide reductase domain-contai... 95.5 1e-18 ref|NP_001050156.1| Os03g0360700 [Oryza sativa (japonica cult... 95.1 1e-18 gb|ACG31259.1| peptide methionine sulfoxide reductase msrB [Z... 95.1 2e-18 gb|ACG39602.1| hypothetical protein [Zea mays] 94.4 2e-18 ref|XP_002313951.1| methionine sulfoxide reductase type [Popu... 94.4 3e-18 ref|XP_001936999.1| peptide methionine sulfoxide reductase ms... 94.4 3e-18 ref|XP_817746.1| hypothetical protein [Trypanosoma cruzi stra... 94.4 3e-18 ref|XP_001541033.1| peptide methionine sulfoxide reductase ms... 94.0 3e-18 gb|ABO64854.1| methionine-R-sulfoxide reductase B1 protein [C... 94.0 3e-18 gb|ABO64855.1| methionine-R-sulfoxide reductase B2 protein [C... 94.0 3e-18 gb|EEF44066.1| methionine sulfoxide reductase, putative [Rici... 94.0 4e-18 emb|CAP80586.1| Pc12g09590 [Penicillium chrysogenum Wisconsin... 94.0 4e-18 ref|XP_001831440.1| hypothetical protein CC1G_00987 [Coprinop... 94.0 4e-18 emb|CAN83184.1| hypothetical protein [Vitis vinifera] >emb|CA... 93.6 5e-18 gb|EDP49353.1| methionine-R-sulfoxide reductase SelR, putativ... 93.6 5e-18 ref|XP_001257902.1| methionine-R-sulfoxide reductase SelR, pu... 93.2 6e-18 emb|CAO71064.1| unnamed protein product [Vitis vinifera] 93.2 7e-18 ref|XP_002278920.1| PREDICTED: hypothetical protein [Vitis vi... 92.8 7e-18 emb|CAJ34818.1| methionine sulfoxide reductase [Plantago major] 92.8 7e-18 gb|ACF85756.1| unknown [Zea mays] 92.8 8e-18 ref|XP_635358.1| hypothetical protein [Dictyostelium discoide... 92.4 1e-17 gb|ABK21123.1| unknown [Picea sitchensis] >gb|ABK21855.1| unk... 92.4 1e-17 ref|NP_001078422.1| methionine sulfoxide reductase domain-con... 92.0 1e-17 gb|ACN40176.1| unknown [Picea sitchensis] 91.7 2e-17 emb|CAN76573.1| hypothetical protein [Vitis vinifera] 91.7 2e-17 ref|NP_567637.1| methionine sulfoxide reductase domain-contai... 91.7 2e-17 ref|XP_568991.1| protein-methionine-R-oxide reductase [Crypto... 91.3 2e-17 ref|XP_001699051.1| hypothetical protein CHLREDRAFT_106339 [C... 91.3 2e-17 ref|XP_002300306.1| methionine sulfoxide reductase type [Popu... 91.3 3e-17 ref|XP_659536.1| hypothetical protein AN1932.2 [Aspergillus n... 91.3 3e-17 ref|XP_001684552.1| hypothetical protein [Leishmania major st... 90.9 3e-17 gb|ACN39810.1| unknown [Picea sitchensis] 90.9 3e-17 ref|XP_001699002.1| hypothetical protein CHLREDRAFT_193479 [C... 90.5 4e-17 ref|ZP_01386335.1| peptide methionine sulfoxide reductase [Ch... 90.5 4e-17 ref|NP_193915.1| methionine sulfoxide reductase domain-contai... 90.5 4e-17 gb|EED23318.1| methionine-R-sulfoxide reductase SelR, putativ... 90.1 5e-17 gb|AAM62541.1| unknown [Arabidopsis thaliana] 90.1 5e-17 ref|XP_002144765.1| methionine-R-sulfoxide reductase SelR, pu... 90.1 6e-17 ref|XP_001247486.1| hypothetical protein CIMG_01257 [Coccidio... 89.7 7e-17 ref|XP_757875.1| hypothetical protein UM01728.1 [Ustilago may... 89.4 8e-17 ref|XP_501477.1| YALI0C05533p [Yarrowia lipolytica] >emb|CAG8... 89.4 9e-17 gb|EED80922.1| methionine-R-sulfoxide reductase-like protein ... 89.4 1e-16 ref|ZP_01810754.1| methionine-R-sulfoxide reductase [candidat... 89.0 1e-16 ref|XP_001470311.1| hypothetical protein [Leishmania infantum... 89.0 1e-16 ref|XP_001730571.1| hypothetical protein MGL_2367 [Malassezia... 88.6 1e-16 ref|XP_001875189.1| methionine sulfoxide reductase [Laccaria ... 88.2 2e-16 ref|ZP_03656454.1| methionine sulfoxide reductase B [Helicoba... 87.8 2e-16 ref|XP_452255.1| unnamed protein product [Kluyveromyces lacti... 87.0 5e-16 ref|XP_002312724.1| methionine sulfoxide reductase type [Popu... 87.0 5e-16 gb|EEF45435.1| methionine sulfoxide reductase, putative [Rici... 86.3 7e-16 ref|NP_192393.2| methionine sulfoxide reductase domain-contai... 86.3 7e-16 ref|NP_595356.1| methionine sulfoxide (predicted) [Schizosacc... 85.9 9e-16 emb|CAB80849.1| putative protein [Arabidopsis thaliana] 85.9 1e-15 gb|AAM64435.1| contains similarity to Helicobacter pylori pep... 85.5 1e-15 gb|AAD03445.1| contains similarity to Helicobacter pylori pep... 85.5 1e-15 ref|NP_567638.1| methionine sulfoxide reductase domain-contai... 85.5 1e-15 ref|XP_001566313.1| hypothetical protein [Leishmania brazilie... 85.5 1e-15 ref|NP_192390.1| methionine sulfoxide reductase domain-contai... 85.5 1e-15 ref|XP_829255.1| hypothetical protein [Trypanosoma brucei TRE... 85.1 2e-15 ref|YP_001410258.1| bifunctional methionine sulfoxide reducta... 85.1 2e-15 ref|YP_002480523.1| peptide methionine sulfoxide reductase [D... 84.3 3e-15 ref|ZP_03311553.1| hypothetical protein DESPIG_01469 [Desulfo... 84.3 3e-15 gb|EDK35951.2| hypothetical protein PGUG_00049 [Pichia guilli... 84.0 4e-15 ref|XP_001526552.1| peptide methionine sulfoxide reductase ms... 83.6 5e-15 ref|XP_001523373.1| peptide methionine sulfoxide reductase ms... 83.6 5e-15 ref|XP_718384.1| hypothetical protein CaO19.10802 [Candida al... 83.2 6e-15 emb|CAC33588.1| hypothetical protein [Pichia pastoris] 83.2 6e-15 ref|XP_001486672.1| hypothetical protein PGUG_00049 [Pichia g... 83.2 6e-15 ref|XP_445007.1| unnamed protein product [Candida glabrata] >... 82.8 8e-15 emb|CAX44359.1| methionine sulfoxide, putative [Candida dubli... 82.8 8e-15 ref|ZP_03659950.1| bifunctional methionine sulfoxide reductas... 82.8 9e-15 ref|YP_001490549.1| methionine sulfoxide reductase B [Arcobac... 82.4 1e-14 ref|NP_864837.1| peptide methionine sulfoxide reductase [Rhod... 82.0 1e-14 ref|YP_002334513.1| peptide methionine sulfoxide reductase [T... 82.0 1e-14 ref|YP_001050232.1| peptide methionine sulfoxide reductase [S... 82.0 1e-14