These options control formatting of alignments in results pages. The default is HTML, but other formats (including plain text) are available. PSSM and PssmWithParameters are representations of Position Specific Scoring Matrices and are only available for PSI-BLAST. The Advanced view option allows the database descriptions to be sorted by various indices in a table. more...
Choose how to view alignments. The default "pairwise" view shows how each subject sequence aligns individually to the query sequence. The "query-anchored" view shows how all subject sequences align to the query sequence. For each view type, you can choose to show "identities" (matching residues) as letters or dots. more...
Show only sequences from the given organism.
Show only those sequences that match the given Entrez query. more...
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Informational Message: One or more U or O characters replaced by X for alignment score calculations at positions 43
Informational Message: Query 'lcl|51464 SelH quimerica' (# 1): Warning: One or more U or O characters replaced by X for alignment score calculations at positions 43
Your BLAST job specified more than one input sequence. This box lets you choose which input sequence to show BLAST results for.
An overview of the database sequences aligned to the query sequence is shown. The score of each alignment is indicated by one of five different colors, which divides the range of scores into five groups. Multiple alignments on the same database sequence are connected by a striped line. Mousing over a hit sequence causes the definition and score to be shown in the window at the top, clicking on a hit sequence takes the user to the associated alignments. New: This graphic is an overview of database sequences aligned to the query sequence. Alignments are color-coded by score, within one of five score ranges. Multiple alignments on the same database sequence are connected by a dashed line. Mousing over an alignment shows the alignment definition and score in the box at the top. Clicking an alignment displays the alignment detail.
Score E Sequences producing significant alignments: (Bits) Value ref|XP_001915098.1| PREDICTED: similar to Selenoprotein H [Eq... 173 4e-42 ref|NP_734467.1| selenoprotein H [Homo sapiens] >sp|Q8IZQ5.2|... 171 2e-41 sp|Q4R5Y4.2|SELH_MACFA RecName: Full=Selenoprotein H; Short=SelH 163 4e-39 ref|NP_001108411.1| selenoprotein H [Rattus norvegicus] 149 6e-35 ref|NP_001028338.1| selenoprotein H [Mus musculus] >ref|NP_00... 147 3e-34 dbj|BAE01491.1| unnamed protein product [Macaca fascicularis] 103 5e-21 gb|EDL27293.1| RIKEN cDNA 2700094K13 [Mus musculus] 101 2e-20 ref|NP_835234.2| selenoprotein H [Danio rerio] 89.7 8e-17 gb|AAO86701.1| selenoprotein H-like protein [Danio rerio] 85.9 9e-16 ref|XP_002196532.1| PREDICTED: similar to selenoprotein H, pa... 78.6 2e-13 gb|EAW73781.1| chromosome 11 open reading frame 31 [Homo sapi... 66.6 6e-10 sp|Q9VYB0.5|BTHD_DROME RecName: Full=Selenoprotein BthD; AltN... 59.3 9e-08 ref|XP_002049560.1| GJ20686 [Drosophila virilis] >gb|EDW60753... 58.9 1e-07 ref|XP_002112926.1| hypothetical protein TRIADDRAFT_56553 [Tr... 58.5 2e-07 ref|NP_572903.3| BthD selenoprotein [Drosophila melanogaster]... 58.2 2e-07 ref|XP_002063571.1| GK21341 [Drosophila willistoni] >gb|EDW74... 58.2 2e-07 ref|XP_002017830.1| GL17098 [Drosophila persimilis] >gb|EDW35... 57.0 5e-07 ref|XP_001985858.1| GH20859 [Drosophila grimshawi] >gb|EDW007... 56.2 9e-07 ref|XP_001975989.1| GG20244 [Drosophila erecta] >gb|EDV56389.... 54.7 2e-06 ref|XP_002006295.1| GI20966 [Drosophila mojavensis] >gb|EDW10... 54.7 2e-06 ref|XP_001360927.2| GA12102 [Drosophila pseudoobscura pseudoo... 54.3 3e-06 ref|XP_001958970.1| GF12290 [Drosophila ananassae] >gb|EDV357... 53.9 4e-06 ref|XP_002124918.1| PREDICTED: similar to Selenoprotein H (Se... 53.1 6e-06 ref|XP_002091132.1| GE12404 [Drosophila yakuba] >gb|EDW90844.... 52.4 1e-05 ref|NP_610725.1| CG13186 [Drosophila melanogaster] >gb|AAF585... 52.4 1e-05 ref|XP_001657132.1| hypothetical protein AaeL_AAEL003681 [Aed... 52.4 1e-05 ref|XP_002116033.1| hypothetical protein TRIADDRAFT_60064 [Tr... 52.0 2e-05 ref|XP_001861495.1| selenoprotein BthD [Culex quinquefasciatu... 50.4 4e-05 gb|EEF34383.1| conserved hypothetical protein [Ricinus communis] 50.4 4e-05 ref|XP_002033477.1| GM21331 [Drosophila sechellia] >gb|EDW474... 48.5 2e-04 ref|XP_002081122.1| GD10839 [Drosophila simulans] >gb|EDX0670... 48.1 2e-04 gb|EDL79307.1| rCG27335, isoform CRA_a [Rattus norvegicus] >g... 47.8 3e-04 ref|XP_002076997.1| GD24812 [Drosophila simulans] >gb|EDX1659... 44.7 0.003 ref|XP_001978253.1| GG17796 [Drosophila erecta] >gb|EDV47180.... 43.9 0.004 ref|NP_001068541.1| Os11g0704000 [Oryza sativa (japonica cult... 43.9 0.004 gb|EAY81900.1| hypothetical protein OsI_37072 [Oryza sativa I... 43.9 0.005 ref|XP_002100490.1| GE17092 [Drosophila yakuba] >gb|EDX01598.... 43.1 0.008 ref|XP_002071559.1| GK25075 [Drosophila willistoni] >gb|EDW82... 42.7 0.010 ref|NP_194864.2| selenium binding [Arabidopsis thaliana] >gb|... 42.0 0.016 emb|CAO43944.1| unnamed protein product [Vitis vinifera] 41.6 0.020 emb|CAN66162.1| hypothetical protein [Vitis vinifera] 41.6 0.021 ref|XP_001966993.1| GF21759 [Drosophila ananassae] >gb|EDV383... 39.7 0.082 ref|NP_565570.1| selenium binding [Arabidopsis thaliana] >gb|... 39.7 0.087 ref|XP_001241984.1| predicted protein [Coccidioides immitis R... 39.3 0.098 ref|XP_001702407.1| selenoprotein H [Chlamydomonas reinhardti... 38.5 0.20 ref|XP_002332115.1| predicted protein [Populus trichocarpa] >... 37.4 0.41 gb|AAM51045.1| SD09114p [Drosophila melanogaster] 37.0 0.59 ref|XP_001961687.1| GF15090 [Drosophila ananassae] >gb|EDV309... 36.6 0.64 ref|YP_024241.1| glutamate synthase [NADPH] large chain fragm... 33.9 4.6 gb|ACN36768.1| unknown [Zea mays] 33.5 5.3 gb|ACG34879.1| selT/selW/selH selenoprotein domain containing... 33.5 5.3 ref|YP_001757026.1| ABC transporter related [Methylobacterium... 33.5 5.5 emb|CAA16539.1| hypothetical protein [Arabidopsis thaliana] >... 33.5 5.6 gb|ACG35486.1| selT/selW/selH selenoprotein domain containing... 33.5 6.0 ref|ZP_02144870.1| TrkA-C [Phaeobacter gallaeciensis BS107] >... 33.5 6.0 ref|ZP_02148258.1| trkA-C domain protein [Phaeobacter gallaec... 33.5 6.0 ref|ZP_02082241.1| hypothetical protein CLOLEP_03730 [Clostri... 33.1 6.6