TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Homo sapiens # Complete
         (203 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    55   1e-07
gb|AAXJ01000116.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   3.5  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
 Frame = -2

Query: 37    GKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPC---------------NQF 81
             G V+L+ NVAS  G T   Y    EL ++ G RG  ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 82    GHQENAKNEEILNSL-KYVRPGGGFEPN-FMLFEKCEVNGAGAHPLFAFLREALPAPSDD 139
              +QE   N++I + +   ++P  G +   F+L E C+VNG  A P+F  L          
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 140   AT-------ALMTDPKLITWSPVCRNDVAWNFEKFLV 169
                      + + DPKL    P     + WNF KFLV
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKP-----IPWNFGKFLV 51689


>gb|AAXJ01000116.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296694856,
             whole genome shotgun sequence
          Length = 63612

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 143   LMTDPKLITWSPVCRNDVAWNFEKFLVGP 171
             +M   K+ TWS VC  D+  NFE  L  P
Sbjct: 46891 IMRCGKICTWSTVCVGDICGNFEWLLYTP 46977


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.137    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,439,817
Number of Sequences: 23491
Number of extensions: 309347
Number of successful extensions: 1226
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1224
length of query: 203
length of database: 28,681,891
effective HSP length: 101
effective length of query: 102
effective length of database: 26,309,300
effective search space: 2683548600
effective search space used: 2683548600
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000005_1.0 # Protein # Glutathione peroxidase 2 (GPx2) #
Homo sapiens # Complete
         (190 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    45   8e-07
gb|AAXJ01010020.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.1  
gb|AAXJ01000397.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.1  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 44.7 bits (104), Expect(2) = 8e-07
 Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
 Frame = -2

Query: 28    GRAVLIENVASLUGTTTRDFTQLNELQCRF-PRRLVVLGFPCN---------------QF 71
             G  VL+ NVAS  G T   +    EL  +F  R   ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 72    GHQENCQNEEILNSLKYV-RPGGGYQP-TFTLVQKCEVNGQNEHPVFAYL-------KDK 122
              +QE   N++I + +  + +P  G +   F L + C+VNG    PVF  L       + +
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 123   LPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLI 159
             + + +    S + DPKL      +   + WNF KFL+
Sbjct: 51784 VCHRFLKYHSGLYDPKL-----GKSKPIPWNFGKFLV 51689



 Score = 26.2 bits (56), Expect(2) = 8e-07
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 7     SFYDLSAISLDGEKVDFNTFRG 28
             +FY LSA  ++GE ++F  FRG
Sbjct: 52260 NFYKLSAPLINGEVLNFEKFRG 52195


>gb|AAXJ01010020.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296627788, whole genome shotgun sequence
          Length = 1583

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = -1

Query: 61  LVVLGFPCNQFGHQENCQNEEILNSLKYVRPGG--GYQPTFTLVQKCEVNGQNEH--PVF 116
           L  LGF  ++ G +  C N  I  S+ +   GG  G  P +T    C +  +N H  P+ 
Sbjct: 269 LTHLGFEWSKPGSKRPCPNASISGSVYFCGDGGRSGSPPIWT---PCLIESENPHRQPLA 99

Query: 117 AYLKDK 122
           A+ K K
Sbjct: 98  AHYKYK 81


>gb|AAXJ01000397.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296653970,
             whole genome shotgun sequence
          Length = 31171

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
 Frame = -3

Query: 101   LVQKCEVNGQNEHPVFAY-----------LKDKLPYPYDDPFSLMTDPKLIIWSPVRRSD 149
             L + CE + ++EH   +            L +KL YP+ DP S    P+L+I  P   +D
Sbjct: 19367 LEKNCEESDESEHKAKSLYQVDGYCLRKGLLNKLEYPHGDPLS---SPRLVICIPTDTND 19197


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.323    0.141    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,652,781
Number of Sequences: 23491
Number of extensions: 315025
Number of successful extensions: 1186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of query: 190
length of database: 28,681,891
effective HSP length: 100
effective length of query: 90
effective length of database: 26,332,791
effective search space: 2369951190
effective search space used: 2369951190
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000006_1.0 # Protein # Glutathione peroxidase 3 (GPx3) #
Homo sapiens # Complete
         (226 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    35   0.10 
gb|AAXJ01001320.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   7.3  
gb|AAXJ01000349.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.5  
gb|AAXJ01000155.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.5  
gb|AAXJ01000117.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.5  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 47/159 (29%), Positives = 61/159 (38%), Gaps = 30/159 (18%)
 Frame = -2

Query: 60    AGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVILGFPCN---------------Q 103
             +G  VL  NVAS  GLT  QY     L ++    G  I+GFP                 Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 104   FGKQEPGENSEILPTLKYV-RPGGGFVPN-FQLFEKGDVNGEKEQKFYTFLKNSCPPTSE 161
             F  QE   N +I   +  + +P  G     F L E  DVNG+K    +  L       S 
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*L------LSH 51806

Query: 162   LLGTSDRLFWEPMKVHD------------IRWNFEKFLV 188
              + +  R+    +K H             I WNF KFLV
Sbjct: 51805 RVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01001320.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296267768,
            whole genome shotgun sequence
          Length = 12249

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 4    LLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTI 40
            ++ + CLL  LL+ FV ++ G  +    CH G+ G +
Sbjct: 4763 VIASICLLFFLLSSFVWENCGSAQLWKTCHDGVGGML 4873


>gb|AAXJ01000349.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296609188,
             whole genome shotgun sequence
          Length = 33435

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = +1

Query: 109   PGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN--------SCPP 158
             PG+  E+      +  GGG    FQLF+K      KE++F +FL N        +CPP
Sbjct: 12478 PGD--ELAYNFHVIAKGGGSANKFQLFQKTKA-FLKEKEFESFLMNEIAHFGTSACPP 12642


>gb|AAXJ01000155.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296299514,
             whole genome shotgun sequence
          Length = 54859

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = +2

Query: 109   PGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN--------SCPP 158
             PG+  E+      +  GGG    FQLF+K      KE++F +FL N        +CPP
Sbjct: 31103 PGD--ELAYNFHVIAKGGGSANKFQLFQKTKA-FLKEKEFESFLMNEIAHFGTSACPP 31267


>gb|AAXJ01000117.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296715070,
             whole genome shotgun sequence
          Length = 63114

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 189   GPDGIPIMRWHHR-TTVSNVKMDILSYMRRQAALGVK 224
             G D +P+  WHHR TT S      + ++R   ++ +K
Sbjct: 27250 GRDLVPVQHWHHRHTTTSTTYRAKIPWLRPMTSISLK 27360


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.140    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,453,737
Number of Sequences: 23491
Number of extensions: 331944
Number of successful extensions: 1494
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of query: 226
length of database: 28,681,891
effective HSP length: 103
effective length of query: 123
effective length of database: 26,262,318
effective search space: 3230265114
effective search space used: 3230265114
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) #
Homo sapiens # Complete
         (197 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    45   8e-05
gb|AAXJ01008651.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01002035.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01001099.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01000364.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01005742.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   7.4  
gb|AAXJ01001268.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.7  
gb|AAXJ01000112.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.7  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 45/157 (28%)
 Frame = -2

Query: 61    GFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCN---------------QF 105
             G V +V NVAS+ G T+  Y    +L  ++ + G +I+ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 106   GKQEPGSNEEIKEFAA-------GYNVKFDMFSKIC-VNGDDAHPLW------------- 144
               QE  +N++I +F         G   K  + ++ C VNGD A P++             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 145   ---KWMKIQ-----PK-GKGILGNAIKWNFTKFLIDK 172
                +++K       PK GK      I WNF KFL++K
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKS---KPIPWNFGKFLVNK 51683


>gb|AAXJ01008651.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296539160,
            whole genome shotgun sequence
          Length = 1761

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 4    GRLCRLLKPALLCGALAAPGLAGTMCASRDDWR 36
            G++ ++ +P     A+  PG+     A RD WR
Sbjct: 1339 GKIAKITRPPAALRAVGGPGIMSMSIAGRDSWR 1437


>gb|AAXJ01002035.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296229176, whole genome shotgun sequence
          Length = 7575

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +1

Query: 131 SKICVNGDDAHPLWKWMKIQPKGKGILGN----AIKWNFTKFLI 170
           S++CV     HPLW W+ I    +G+ G     A  W+F+  L+
Sbjct: 931 SQVCV-----HPLWCWLYIDRFRQGVAGAGWAIATSWSFSLVLL 1047


>gb|AAXJ01001099.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296590334,
            whole genome shotgun sequence
          Length = 14483

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +2

Query: 131  SKICVNGDDAHPLWKWMKIQPKGKGILGN----AIKWNFTKFLI 170
            S++CV     HPLW W+ I    +G+ G     A  W+F+  L+
Sbjct: 2888 SQVCV-----HPLWCWLYIDRFRQGVAGAGWAIATSWSFSLVLL 3004


>gb|AAXJ01000364.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296289460, whole genome shotgun sequence
          Length = 32875

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 77  EVNYTQLVDLHARYAECGLRILAFPC 102
           ++N   ++DLHA+  ECG   L  PC
Sbjct: 880 QMNAIGVLDLHAKMKECGYHFLPGPC 957


>gb|AAXJ01005742.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296709198,
            whole genome shotgun sequence
          Length = 2595

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
 Frame = -2

Query: 142  PLWKWMKIQPKGKGILGNAIKWNFT----KFLIDK---NGCV---VKRYGPMEEPLVIEK 191
            P+W ++ ++   K   G A+ W+FT    K L+ K   + C+   + R+ P   PL +++
Sbjct: 1178 PIWPYVLVREVRKRWYGIALYWSFTLVI*KTLVRKIFHDYCISPRISRFSPSFTPLYVKR 999

Query: 192  -DLPHYF 197
              L +YF
Sbjct: 998  GKLEYYF 978


>gb|AAXJ01001268.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296104107,
            whole genome shotgun sequence
          Length = 12740

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 132  KICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFT 166
            ++C++GDD  P +KW K   K  G L   I+  FT
Sbjct: 6589 QLCLDGDDGLPSFKWAKCPVKEDGKL---IRGEFT 6684


>gb|AAXJ01000112.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296679972,
             whole genome shotgun sequence
          Length = 64280

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 93    CGLRILAFPCNQFGKQEPGSNEEIKEFAAG 122
             CG R++A+    FGK+ P +  + ++ A G
Sbjct: 15943 CGKRMIAYMTKSFGKKSPSTESDAEKGAVG 16032


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.324    0.140    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,822,307
Number of Sequences: 23491
Number of extensions: 335179
Number of successful extensions: 1217
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of query: 197
length of database: 28,681,891
effective HSP length: 101
effective length of query: 96
effective length of database: 26,309,300
effective search space: 2525692800
effective search space used: 2525692800
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000008_1.0 # Protein # Glutathione peroxidase 5 (GPx5) #
Homo sapiens # Complete
         (221 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    44   3e-04
gb|AAXJ01000033.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   2.4  
gb|AAXJ01012228.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.2  
gb|AAXJ01003015.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.2  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 50/152 (32%), Positives = 63/152 (41%), Gaps = 24/152 (15%)
 Frame = -2

Query: 61    GKHILFVNVATYCGLT-AQYPELNALQEELKPYGLVVLGFPCN---------------QF 104
             G  +L  NVA+  GLT AQY     L ++    G  ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 105   GKQEPGDNKEILPGLKYV-RPGGGFVPS-FQLFEKGDVNGEKEQKVFS-FLKHSCPHPSE 161
               QE   NK+I   +  + +P  G     F L E  DVNG+K   VF   L H       
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 162   ILGTF---KSISWDPV--KVHDIRWNFEKFLV 188
             +   F    S  +DP   K   I WNF KFLV
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01000033.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296730460,
             whole genome shotgun sequence
          Length = 90617

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 153   KHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPV---MRWSHRATVSSVKT 209
             KH    P ++LG F+ + +DP  V       E  +     +PV   M W  +   S+ +T
Sbjct: 71814 KHDASEPKQVLGVFQYLQYDPG*V------VEHSVSQSAALPVTNLMSWKAQRATSTAET 71975

Query: 210   DILAYLKQFK 219
             D+ A + + K
Sbjct: 71976 DLEAVIDKCK 72005


>gb|AAXJ01012228.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296736586, whole genome shotgun sequence
          Length = 1364

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
 Frame = +1

Query: 137 KGDVNGEKEQKVFSFLKHSCPHPS--EILGTFK-SISWDPVKVH--DIRWNFE---KFLV 188
           +GD N     +  SFLK+S  HPS  +I  T K +   + +K H   ++WN +     + 
Sbjct: 496 RGDTNNTNSTRYTSFLKNSPRHPSPPQICATKKVNFK*NSLKFHLNSLKWNAQI*TILVT 675

Query: 189 GPDGIPVM 196
            P+ +P M
Sbjct: 676 SPNDLPHM 699


>gb|AAXJ01003015.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296435004,
            whole genome shotgun sequence
          Length = 5102

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 149  FSFLKHSCPHPSEILGTFKSISWD 172
            F  L H C +P   LGT  SI WD
Sbjct: 2038 FHRLGHLCHNPKTCLGTIDSIGWD 1967


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.139    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,148,570
Number of Sequences: 23491
Number of extensions: 350424
Number of successful extensions: 1580
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of query: 221
length of database: 28,681,891
effective HSP length: 102
effective length of query: 119
effective length of database: 26,285,809
effective search space: 3128011271
effective search space used: 3128011271
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000009_1.0 # Protein # Glutathione peroxidase 6 (GPx6) #
Homo sapiens # Complete
         (221 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    33   0.37 

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 47/160 (29%), Positives = 62/160 (38%), Gaps = 31/160 (19%)
 Frame = -2

Query: 60    AGKHVLFVNVAAYUGLA-AQYPELNALQEELKNFGVIVLAFPCN---------------Q 103
             +G  VL  NVA+  GL  AQY     L ++  + G  ++ FP                 Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 104   FGKQEPGTNSEI---LLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTS 160
             F  QE  TN +I   +  +    PG      F L E  DVNG+K   VF  L       S
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKD-KVFLLAEPCDVNGDKASPVFE*L------LS 51809

Query: 161   DLLGSSSQLFWEPMKVHD------------IRWNFEKFLV 188
               + S  ++    +K H             I WNF KFLV
Sbjct: 51808 HRVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.322    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,382,404
Number of Sequences: 23491
Number of extensions: 293237
Number of successful extensions: 1134
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of query: 221
length of database: 28,681,891
effective HSP length: 102
effective length of query: 119
effective length of database: 26,285,809
effective search space: 3128011271
effective search space used: 3128011271
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000010_1.0 # Protein # Glutathione peroxidase 7 (GPx7) #
Homo sapiens # Complete
         (187 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    40   7e-05

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 39.7 bits (91), Expect(2) = 7e-05
 Identities = 41/152 (26%), Positives = 55/152 (36%), Gaps = 47/152 (30%)
 Frame = -2

Query: 45    GSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPC---------------NQF 89
             G V LV NVAS+ G T   Y+   +L +  G   F ++ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 90    GQQEPDSNKEIESFAR---RTY----SVSFPMFSKIAVTGTGAHPAF------------- 129
               QE  +NK+I+ F     + Y       F +     V G  A P F             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 130   ---KYLAQTSG---------KEPTWNFWKYLV 149
                ++L   SG         K   WNF K+LV
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689



 Score = 24.3 bits (51), Expect(2) = 7e-05
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 24    DFYDFKAVNIRGKLVSLEKYRGS 46
             +FY   A  I G++++ EK+RG+
Sbjct: 52260 NFYKLSAPLINGEVLNFEKFRGT 52192


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.133    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,015,227
Number of Sequences: 23491
Number of extensions: 270099
Number of successful extensions: 1137
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of query: 187
length of database: 28,681,891
effective HSP length: 100
effective length of query: 87
effective length of database: 26,332,791
effective search space: 2290952817
effective search space used: 2290952817
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000011_1.0 # Protein # Glutathione peroxidase 8 (GPx8) #
Homo sapiens # Complete
         (209 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    38   0.002
gb|AAXJ01000022.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   2.8  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 37.7 bits (86), Expect(2) = 0.002
 Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 48/154 (31%)
 Frame = -2

Query: 67    GKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPC---------------NQF 111
             G V LV NVAS   LT   Y    EL ++FG   F ++ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 112   GESEPRPSKEVESFAR---KNY-GVTFPIF---HKIKILGSEGEPAF------------- 151
                E + +K+++ F     K Y GV   +F       + G +  P F             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 152   ---RFL----------VDSSKKEPRWNFWKYLVN 172
                RFL          +  SK  P WNF K+LVN
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIP-WNFGKFLVN 51686



 Score = 21.6 bits (44), Expect(2) = 0.002
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 175   GQVVKFWKPEEPIEVIRPDIAALVRQVIIKKK 206
             G+VV FW P+E    I  DI A +   +  KK
Sbjct: 51624 GEVVCFWDPKE--ANIADDIEACIEGRLEGKK 51535


>gb|AAXJ01000022.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296528460,
             whole genome shotgun sequence
          Length = 98640

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 145   SEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWKPE 184
             S+  P +RFLV S+ +  R +   + +N +  V   WKPE
Sbjct: 94816 SDEAPHYRFLVTSNPQVSRCHKGTHCINDDLYVTNVWKPE 94935


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,315,715
Number of Sequences: 23491
Number of extensions: 279201
Number of successful extensions: 1265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1264
length of query: 209
length of database: 28,681,891
effective HSP length: 102
effective length of query: 107
effective length of database: 26,285,809
effective search space: 2812581563
effective search space used: 2812581563
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000065_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Pan troglodytes # Complete
         (201 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    55   1e-07
gb|AAXJ01000116.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   3.5  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
 Frame = -2

Query: 35    GKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPC---------------NQF 79
             G V+L+ NVAS  G T   Y    EL ++ G RG  ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 80    GHQENAKNEEILNSL-KYVRPGGGFEPN-FMLFEKCEVNGAGAHPLFAFLREALPAPSDD 137
              +QE   N++I + +   ++P  G +   F+L E C+VNG  A P+F  L          
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 138   AT-------ALMTDPKLITWSPVCRNDVAWNFEKFLV 167
                      + + DPKL    P     + WNF KFLV
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKP-----IPWNFGKFLV 51689


>gb|AAXJ01000116.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296694856,
             whole genome shotgun sequence
          Length = 63612

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 141   LMTDPKLITWSPVCRNDVAWNFEKFLVGP 169
             +M   K+ TWS VC  D+  NFE  L  P
Sbjct: 46891 IMRCGKICTWSTVCVGDICGNFEWLLYTP 46977


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,306,555
Number of Sequences: 23491
Number of extensions: 304553
Number of successful extensions: 1192
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of query: 201
length of database: 28,681,891
effective HSP length: 101
effective length of query: 100
effective length of database: 26,309,300
effective search space: 2630930000
effective search space used: 2630930000
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000066_1.0 # Protein # Glutathione peroxidase 2 (GPx2) #
Pan troglodytes # Complete
         (190 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    42   4e-06
gb|AAXJ01000397.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   7.0  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 42.4 bits (98), Expect(2) = 4e-06
 Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
 Frame = -2

Query: 28    GRAVLIENVASLUGTTTRDFTQLNELQCRF-PRRLVVLGFPCN---------------QF 71
             G  VL+ NVAS  G T   +    EL  +F  R   ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 72    GHQENCQNEEILNSLKYV-RPGGGYQP-TFTLVQKCEVNGQNEHPKFAYLKD-------K 122
              +QE   N++I + +  + +P  G +   F L + C+VNG    P F  L         +
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 123   LPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLI 159
             + + +    S + DPKL    P+      WNF KFL+
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPI-----PWNFGKFLV 51689



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 7     SFYDLSAISLDGEKVDFNTFRG 28
             +FY LSA  ++GE ++F  FRG
Sbjct: 52260 NFYKLSAPLINGEVLNFEKFRG 52195


>gb|AAXJ01000397.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296653970,
             whole genome shotgun sequence
          Length = 31171

 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 11/60 (18%)
 Frame = -3

Query: 101   LVQKCEVNGQNEHP-KFAY----------LKDKLPYPYDDPFSLMTDPKLIIWSPVRRSD 149
             L + CE + ++EH  K  Y          L +KL YP+ DP S    P+L+I  P   +D
Sbjct: 19367 LEKNCEESDESEHKAKSLYQVDGYCLRKGLLNKLEYPHGDPLS---SPRLVICIPTDTND 19197


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.323    0.141    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,672,631
Number of Sequences: 23491
Number of extensions: 314908
Number of successful extensions: 1181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of query: 190
length of database: 28,681,891
effective HSP length: 100
effective length of query: 90
effective length of database: 26,332,791
effective search space: 2369951190
effective search space used: 2369951190
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000067_1.0 # Protein # Glutathione peroxidase 3 (GPx3) #
Pan troglodytes # Complete
         (226 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    35   0.10 
gb|AAXJ01001320.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   7.3  
gb|AAXJ01000349.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.5  
gb|AAXJ01000155.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.5  
gb|AAXJ01000117.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.5  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 47/159 (29%), Positives = 61/159 (38%), Gaps = 30/159 (18%)
 Frame = -2

Query: 60    AGKYVLFVNVASYUGLT-GQYIELNALQEELAPFGLVILGFPCN---------------Q 103
             +G  VL  NVAS  GLT  QY     L ++    G  I+GFP                 Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 104   FGKQEPGENSEILPTLKYV-RPGGGFVPN-FQLFEKGDVNGEKEQKFYTFLKNSCPPTSE 161
             F  QE   N +I   +  + +P  G     F L E  DVNG+K    +  L       S 
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*L------LSH 51806

Query: 162   LLGTSDRLFWEPMKVHD------------IRWNFEKFLV 188
              + +  R+    +K H             I WNF KFLV
Sbjct: 51805 RVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01001320.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296267768,
            whole genome shotgun sequence
          Length = 12249

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 4    LLQASCLLSLLLAGFVSQSRGQEKSKMDCHGGISGTI 40
            ++ + CLL  LL+ FV ++ G  +    CH G+ G +
Sbjct: 4763 VIASICLLFFLLSSFVWENCGSAQLWKTCHDGVGGML 4873


>gb|AAXJ01000349.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296609188,
             whole genome shotgun sequence
          Length = 33435

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = +1

Query: 109   PGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN--------SCPP 158
             PG+  E+      +  GGG    FQLF+K      KE++F +FL N        +CPP
Sbjct: 12478 PGD--ELAYNFHVIAKGGGSANKFQLFQKTKA-FLKEKEFESFLMNEIAHFGTSACPP 12642


>gb|AAXJ01000155.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296299514,
             whole genome shotgun sequence
          Length = 54859

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = +2

Query: 109   PGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKN--------SCPP 158
             PG+  E+      +  GGG    FQLF+K      KE++F +FL N        +CPP
Sbjct: 31103 PGD--ELAYNFHVIAKGGGSANKFQLFQKTKA-FLKEKEFESFLMNEIAHFGTSACPP 31267


>gb|AAXJ01000117.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296715070,
             whole genome shotgun sequence
          Length = 63114

 Score = 28.5 bits (62), Expect = 9.5
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 189   GPDGIPIMRWHHR-TTVSNVKMDILSYMRRQAALGVK 224
             G D +P+  WHHR TT S      + ++R   ++ +K
Sbjct: 27250 GRDLVPVQHWHHRHTTTSTTYRAKIPWLRPMTSISLK 27360


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.140    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,453,737
Number of Sequences: 23491
Number of extensions: 331944
Number of successful extensions: 1494
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of query: 226
length of database: 28,681,891
effective HSP length: 103
effective length of query: 123
effective length of database: 26,262,318
effective search space: 3230265114
effective search space used: 3230265114
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000068_1.0 # Protein # Glutathione peroxidase 4 (GPx4) #
Pan troglodytes # Complete
         (197 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    45   8e-05
gb|AAXJ01008651.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01002035.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01001099.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01000364.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01005742.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   7.4  
gb|AAXJ01001268.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.7  
gb|AAXJ01000112.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.7  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 45/157 (28%)
 Frame = -2

Query: 61    GFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCN---------------QF 105
             G V +V NVAS+ G T+  Y    +L  ++ + G +I+ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 106   GKQEPGSNEEIKEFAA-------GYNVKFDMFSKIC-VNGDDAHPLW------------- 144
               QE  +N++I +F         G   K  + ++ C VNGD A P++             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 145   ---KWMKIQ-----PK-GKGILGNAIKWNFTKFLIDK 172
                +++K       PK GK      I WNF KFL++K
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKS---KPIPWNFGKFLVNK 51683


>gb|AAXJ01008651.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296539160,
            whole genome shotgun sequence
          Length = 1761

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 4    GRLCRLLKPALLCGALAAPGLAGTMCASRDDWR 36
            G++ ++ +P     A+  PG+     A RD WR
Sbjct: 1339 GKIAKITRPPAALRAVGGPGIMSMSIAGRDSWR 1437


>gb|AAXJ01002035.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296229176, whole genome shotgun sequence
          Length = 7575

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +1

Query: 131 SKICVNGDDAHPLWKWMKIQPKGKGILGN----AIKWNFTKFLI 170
           S++CV     HPLW W+ I    +G+ G     A  W+F+  L+
Sbjct: 931 SQVCV-----HPLWCWLYIDRFRQGVAGAGWAIATSWSFSLVLL 1047


>gb|AAXJ01001099.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296590334,
            whole genome shotgun sequence
          Length = 14483

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
 Frame = +2

Query: 131  SKICVNGDDAHPLWKWMKIQPKGKGILGN----AIKWNFTKFLI 170
            S++CV     HPLW W+ I    +G+ G     A  W+F+  L+
Sbjct: 2888 SQVCV-----HPLWCWLYIDRFRQGVAGAGWAIATSWSFSLVLL 3004


>gb|AAXJ01000364.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296289460, whole genome shotgun sequence
          Length = 32875

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 77  EVNYTQLVDLHARYAECGLRILAFPC 102
           ++N   ++DLHA+  ECG   L  PC
Sbjct: 880 QMNAIGVLDLHAKMKECGYHFLPGPC 957


>gb|AAXJ01005742.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296709198,
            whole genome shotgun sequence
          Length = 2595

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
 Frame = -2

Query: 142  PLWKWMKIQPKGKGILGNAIKWNFT----KFLIDK---NGCV---VKRYGPMEEPLVIEK 191
            P+W ++ ++   K   G A+ W+FT    K L+ K   + C+   + R+ P   PL +++
Sbjct: 1178 PIWPYVLVREVRKRWYGIALYWSFTLVI*KTLVRKIFHDYCISPRISRFSPSFTPLYVKR 999

Query: 192  -DLPHYF 197
              L +YF
Sbjct: 998  GKLEYYF 978


>gb|AAXJ01001268.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296104107,
            whole genome shotgun sequence
          Length = 12740

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 132  KICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFT 166
            ++C++GDD  P +KW K   K  G L   I+  FT
Sbjct: 6589 QLCLDGDDGLPSFKWAKCPVKEDGKL---IRGEFT 6684


>gb|AAXJ01000112.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296679972,
             whole genome shotgun sequence
          Length = 64280

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 93    CGLRILAFPCNQFGKQEPGSNEEIKEFAAG 122
             CG R++A+    FGK+ P +  + ++ A G
Sbjct: 15943 CGKRMIAYMTKSFGKKSPSTESDAEKGAVG 16032


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.324    0.140    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,822,307
Number of Sequences: 23491
Number of extensions: 335179
Number of successful extensions: 1217
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of query: 197
length of database: 28,681,891
effective HSP length: 101
effective length of query: 96
effective length of database: 26,309,300
effective search space: 2525692800
effective search space used: 2525692800
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000069_1.0 # Protein # Glutathione peroxidase 5 (GPx5) #
Pan troglodytes # Complete
         (220 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    38   0.015
gb|AAXJ01000033.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   2.4  
gb|AAXJ01012228.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.1  
gb|AAXJ01003015.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.1  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 49/152 (32%), Positives = 62/152 (40%), Gaps = 25/152 (16%)
 Frame = -2

Query: 61    GKHILFVNVATYCGLT-AQYPELNA-PEELKPYGLVVLGFPCN---------------QF 103
             G  +L  NVA+  GLT AQY       ++    G  ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 104   GKQEPGDNKEILPALKYV-RPGGGFVPS-FQLFEKGDVNGEKEQKVFS-FLKHSCPHPSE 160
               QE   NK+I   +  + +P  G     F L E  DVNG+K   VF   L H       
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 161   ILGTF---KSISWDPV--KVHDIRWNFEKFLV 187
             +   F    S  +DP   K   I WNF KFLV
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01000033.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296730460,
             whole genome shotgun sequence
          Length = 90617

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 152   KHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPV---MRWSHRATVSSVKT 208
             KH    P ++LG F+ + +DP  V       E  +     +PV   M W  +   S+ +T
Sbjct: 71814 KHDASEPKQVLGVFQYLQYDPG*V------VEHSVSQSAALPVTNLMSWKAQRATSTAET 71975

Query: 209   DILAYLKQFK 218
             D+ A + + K
Sbjct: 71976 DLEAVIDKCK 72005


>gb|AAXJ01012228.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296736586, whole genome shotgun sequence
          Length = 1364

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
 Frame = +1

Query: 136 KGDVNGEKEQKVFSFLKHSCPHPS--EILGTFK-SISWDPVKVH--DIRWNFE---KFLV 187
           +GD N     +  SFLK+S  HPS  +I  T K +   + +K H   ++WN +     + 
Sbjct: 496 RGDTNNTNSTRYTSFLKNSPRHPSPPQICATKKVNFK*NSLKFHLNSLKWNAQI*TILVT 675

Query: 188 GPDGIPVM 195
            P+ +P M
Sbjct: 676 SPNDLPHM 699


>gb|AAXJ01003015.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296435004,
            whole genome shotgun sequence
          Length = 5102

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 148  FSFLKHSCPHPSEILGTFKSISWD 171
            F  L H C +P   LGT  SI WD
Sbjct: 2038 FHRLGHLCHNPKTCLGTIDSIGWD 1967


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.139    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,243,827
Number of Sequences: 23491
Number of extensions: 354835
Number of successful extensions: 1603
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1602
length of query: 220
length of database: 28,681,891
effective HSP length: 102
effective length of query: 118
effective length of database: 26,285,809
effective search space: 3101725462
effective search space used: 3101725462
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000070_1.0 # Protein # Glutathione peroxidase 6 (GPx6) #
Pan troglodytes # Complete
         (221 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    33   0.49 
gb|AAXJ01016608.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   3.2  
gb|AAXJ01001021.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.2  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 47/160 (29%), Positives = 62/160 (38%), Gaps = 31/160 (19%)
 Frame = -2

Query: 60    AGKHVLFVNVATYUGLA-AQYPELNALQEELKNFGVIVLAFPCN---------------Q 103
             +G  VL  NVA+  GL  AQY     L ++  + G  ++ FP                 Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 104   FGKQEPGTNSEI---LLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTS 160
             F  QE  TN +I   +  +    PG      F L E  DVNG+K   VF  L       S
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKD-KVFLLAEPCDVNGDKASPVFE*L------LS 51809

Query: 161   DLLGSSSQLFWEPMKVHD------------ICWNFEKFLV 188
               + S  ++    +K H             I WNF KFLV
Sbjct: 51808 HRVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01016608.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296617140, whole genome shotgun sequence
          Length = 1094

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 5   FQASCLVLLFLVGFAQQILKPQNRKVD 31
           F A  L L+FL G A  ++KP +RKVD
Sbjct: 120 FVAGFLSLMFLTGSAFAVMKPSDRKVD 40


>gb|AAXJ01001021.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296661798, whole genome shotgun sequence
          Length = 15549

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +1

Query: 128 FVPSFQLFEKG----DVNGEKEQKVFTFLKNSCPPTSDLLGSS---SQLFWEPMKVHDIC 180
           F   FQLF  G    D+  EK     T  +++ PP   +  SS   S++ W+P +VH IC
Sbjct: 925 FAICFQLFLGGRTEKDIPREKGSCPSTSSRSASPPRVIIWYSSFSFSRITWKP*EVHRIC 1104


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.322    0.140    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,487,720
Number of Sequences: 23491
Number of extensions: 293419
Number of successful extensions: 1144
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of query: 221
length of database: 28,681,891
effective HSP length: 102
effective length of query: 119
effective length of database: 26,285,809
effective search space: 3128011271
effective search space used: 3128011271
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000071_1.0 # Protein # Glutathione peroxidase 7 (GPx7) #
Pan troglodytes # Complete
         (134 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    39   5e-05
gb|AAXJ01001500.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    27   9.1  
gb|AAXJ01000117.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    27   9.1  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 39.3 bits (90), Expect(2) = 5e-05
 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
 Frame = -2

Query: 45    GSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPC---------------NQF 89
             G V LV NVAS+ G T   Y+   +L +  G   F ++ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 90    GQQEPDSNKEIESF 103
               QE  +NK+I+ F
Sbjct: 51964 LNQEMKTNKDIDDF 51923



 Score = 24.3 bits (51), Expect(2) = 5e-05
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 24    DFYDFKAVNIRGKLVSLEKYRGS 46
             +FY   A  I G++++ EK+RG+
Sbjct: 52260 NFYKLSAPLINGEVLNFEKFRGT 52192


>gb|AAXJ01001500.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296739582,
            whole genome shotgun sequence
          Length = 10541

 Score = 26.9 bits (58), Expect = 9.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 46   SVSLVVNVASECGFTDQH 63
            S+SLVV+V   C FTD H
Sbjct: 4509 SLSLVVSVTINCAFTDDH 4562


>gb|AAXJ01000117.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296715070,
             whole genome shotgun sequence
          Length = 63114

 Score = 26.9 bits (58), Expect = 9.1
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +2

Query: 43    YRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVL---AFPCNQFGQQEPDSN 97
             Y G    +  V+  C   D H   L+QL+  + PHH ++L    F C+   Q+ P SN
Sbjct: 41138 YSGKHESIAAVSLIC---DDH---LEQLKSSVLPHHCHLLNKSCFHCSHRRQRPPTSN 41293


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.323    0.133    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,687,001
Number of Sequences: 23491
Number of extensions: 189029
Number of successful extensions: 888
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of query: 134
length of database: 28,681,891
effective HSP length: 94
effective length of query: 40
effective length of database: 26,473,737
effective search space: 1058949480
effective search space used: 1058949480
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000098_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Mus musculus # Complete
         (201 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    53   4e-07

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 19/152 (12%)
 Frame = -2

Query: 35    GKVLLIENVASLUGTTIRDYTEMNDLQKRLGPRGLVVLGFPC---------------NQF 79
             G V+L+ NVAS  G T   Y    +L ++ G RG  ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 80    GHQENGKNEEILNSL-KYVRPGGGFEPN-FTLFEKCEVNGEKAHPLFTFLRNALPTPSDD 137
              +QE   N++I + +   ++P  G +   F L E C+VNG+KA P+F  L +        
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 138   PTALMTDPKYIIWSPVC--RNDIAWNFEKFLV 167
                        ++ P       I WNF KFLV
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.319    0.138    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,420,628
Number of Sequences: 23491
Number of extensions: 323574
Number of successful extensions: 1272
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of query: 201
length of database: 28,681,891
effective HSP length: 101
effective length of query: 100
effective length of database: 26,309,300
effective search space: 2630930000
effective search space used: 2630930000
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000099_1.0 # Protein # Glutathione peroxidase 2 (GPx2) #
Mus musculus # Complete
         (190 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    48   1e-07
gb|AAXJ01000661.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.1  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 47.8 bits (112), Expect(2) = 1e-07
 Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 25/157 (15%)
 Frame = -2

Query: 28    GRAVLIENVASLUGTTTRDYNQLNELQCRF-PRRLVVLGFPCN---------------QF 71
             G  VL+ NVAS  G T   Y    EL  +F  R   ++GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 72    GHQENCQNEEILNSLKYV-RPGGGYQP-TFSLTQKCDVNGQNEHPVFAYL-------KDK 122
              +QE   N++I + +  + +P  G +   F L + CDVNG    PVF  L       + +
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 123   LPYPYDDPFSLMTDPKLIIWSPVRRSDVSWNFEKFLI 159
             + + +    S + DPKL      +   + WNF KFL+
Sbjct: 51784 VCHRFLKYHSGLYDPKL-----GKSKPIPWNFGKFLV 51689



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 7     SFYDLSAVGLDGEKIDFNTFRG 28
             +FY LSA  ++GE ++F  FRG
Sbjct: 52260 NFYKLSAPLINGEVLNFEKFRG 52195


>gb|AAXJ01000661.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296683450,
            whole genome shotgun sequence
          Length = 22287

 Score = 28.1 bits (61), Expect = 9.1
 Identities = 15/57 (26%), Positives = 25/57 (43%)
 Frame = +1

Query: 134  MTDPKLIIWSPVRRSDVSWNFEKFLIGPEGEPFRRYSRSFQTINIEPDIKRLLKVAI 190
            M   ++  WS   RS+V W     + G       RYS S+ +      +KRL  +++
Sbjct: 3799 MPSQQVPFWSKAFRSNV*WRCRTIITG*ASSS*GRYSVSYYSSKTRIKLKRLFSISL 3969


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.322    0.141    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,958,012
Number of Sequences: 23491
Number of extensions: 321223
Number of successful extensions: 1210
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of query: 190
length of database: 28,681,891
effective HSP length: 100
effective length of query: 90
effective length of database: 26,332,791
effective search space: 2369951190
effective search space used: 2369951190
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000100_1.0 # Protein # Glutathione peroxidase 3 (GPx3) #
Mus musculus # Complete
         (223 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    32   0.85 
gb|AAXJ01000349.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   4.2  
gb|AAXJ01000155.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   4.2  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 45/159 (28%), Positives = 60/159 (37%), Gaps = 33/159 (20%)
 Frame = -2

Query: 60    AGKYILFVNVASY----GDQYLELNALQEELGPFGLVILGFPSN---------------Q 100
             +G  +L  NVAS       QY     L ++ G  G  I+GFPS                Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 101   FGKQEPGENSEILPSLKYV-RPGGGFVPN-FQLFEKGDVNGEKEQKFYTFLKNSCPPTAE 158
             F  QE   N +I   +  + +P  G     F L E  DVNG+K    +  L       + 
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*L------LSH 51806

Query: 159   LLGSPGRLFWEPMKIHD------------IRWNFEKFLV 185
              + S  R+    +K H             I WNF KFLV
Sbjct: 51805 RVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01000349.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296609188,
             whole genome shotgun sequence
          Length = 33435

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
 Frame = +1

Query: 74    DQYLELNALQEELGPFGLVILGFPSNQFGKQEPGE--------NSEILPSLKYVRPGGGF 125
             D Y + N    ++ P  +    F     G   P +          E+  +   +  GGG 
Sbjct: 12364 DAYTQDNLRYSQVAPLSM----FEEKNTGNNLPAQIEVYAGCPGDELAYNFHVIAKGGGS 12531

Query: 126   VPNFQLFEKGDVNGEKEQKFYTFLKN--------SCPP 155
                FQLF+K      KE++F +FL N        +CPP
Sbjct: 12532 ANKFQLFQKTKA-FLKEKEFESFLMNEIAHFGTSACPP 12642


>gb|AAXJ01000155.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296299514,
             whole genome shotgun sequence
          Length = 54859

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 16/98 (16%)
 Frame = +2

Query: 74    DQYLELNALQEELGPFGLVILGFPSNQFGKQEPGE--------NSEILPSLKYVRPGGGF 125
             D Y + N    ++ P  +    F     G   P +          E+  +   +  GGG 
Sbjct: 30989 DAYTQDNLRYSQVAPLSM----FEEKNTGNNLPAQIEVYAGCPGDELAYNFHVIAKGGGS 31156

Query: 126   VPNFQLFEKGDVNGEKEQKFYTFLKN--------SCPP 155
                FQLF+K      KE++F +FL N        +CPP
Sbjct: 31157 ANKFQLFQKTKA-FLKEKEFESFLMNEIAHFGTSACPP 31267


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.320    0.141    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,811,037
Number of Sequences: 23491
Number of extensions: 355367
Number of successful extensions: 1626
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of query: 223
length of database: 28,681,891
effective HSP length: 102
effective length of query: 121
effective length of database: 26,285,809
effective search space: 3180582889
effective search space used: 3180582889
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000101_1.0 # Protein # Glutathione peroxidase 4 (GPx4) #
Mus musculus # Complete
         (197 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    45   8e-05
gb|AAXJ01008651.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   4.4  
gb|AAXJ01000045.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   5.7  
gb|AAXJ01001268.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   7.4  
gb|AAXJ01000364.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.7  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 42/161 (26%)
 Frame = -2

Query: 54    VCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPC----------- 102
             VCL    G V +V NVAS+ G T   Y    +L  ++ + G +I+ FP            
Sbjct: 52159 VCLSS--GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWM 51986

Query: 103   ----NQFGRQEPGSNQEIKEFAA-------GYNVKFDMYSKIC-VNGDDAHPLWKWM--- 147
                  QF  QE  +N++I +F         G   K  + ++ C VNGD A P+++ +   
Sbjct: 51985 LLVFRQFLNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSH 51806

Query: 148   KVQPKGR--------------GMLGNA--IKWNFTKFLIDK 172
             +V  + R                LG +  I WNF KFL++K
Sbjct: 51805 RVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLVNK 51683


>gb|AAXJ01008651.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296539160,
            whole genome shotgun sequence
          Length = 1761

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 4    GRLSRLLKPALLCGALAAPGLAGTMCASRDDWR 36
            G+++++ +P     A+  PG+     A RD WR
Sbjct: 1339 GKIAKITRPPAALRAVGGPGIMSMSIAGRDSWR 1437


>gb|AAXJ01000045.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296665896,
             whole genome shotgun sequence
          Length = 81915

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = -3

Query: 110   PGSNQEIKEFAAGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKG----RGMLGNAIKWNF 165
             P S  E++   A   V    ++ +C+  D     W + K   +     R M G  I+W F
Sbjct: 51091 PPSVSELENPGAKRRVLLVYFTSVCIKTDQ----WSYRKACHQTGNACRFMAGPTIRWRF 50924

Query: 166   TKFLIDKNGCVVK 178
              KF+     CVVK
Sbjct: 50923 PKFI---TRCVVK 50894


>gb|AAXJ01001268.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296104107,
            whole genome shotgun sequence
          Length = 12740

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 132  KICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFT 166
            ++C++GDD  P +KW K   K  G L   I+  FT
Sbjct: 6589 QLCLDGDDGLPSFKWAKCPVKEDGKL---IRGEFT 6684


>gb|AAXJ01000364.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296289460, whole genome shotgun sequence
          Length = 32875

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 78  VNYTQLVDLHARYAECGLRILAFPC 102
           +N   ++DLHA+  ECG   L  PC
Sbjct: 883 MNAIGVLDLHAKMKECGYHFLPGPC 957


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.324    0.139    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,610,762
Number of Sequences: 23491
Number of extensions: 355787
Number of successful extensions: 1808
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of query: 197
length of database: 28,681,891
effective HSP length: 101
effective length of query: 96
effective length of database: 26,309,300
effective search space: 2525692800
effective search space used: 2525692800
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000102_1.0 # Protein # Glutathione peroxidase 5 (GPx5) #
Mus musculus # Complete
         (237 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    32   1.2  
gb|AAXJ01013321.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   6.1  
gb|AAXJ01000030.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   6.1  
gb|AAXJ01007251.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   7.9  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 46/159 (28%), Positives = 58/159 (36%), Gaps = 30/159 (18%)
 Frame = -2

Query: 76    AGKHVLFVNVATYCGLT-IQYPELNALQEDLKPFGLVILGFPCN---------------Q 119
             +G  VL  NVA+  GLT  QY     L +     G  I+GFP                 Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 120   FGKQEPGDNLEILPGLKYV-RPGKGFLPNFQLFAKG-DVNGENEQKIFTFLKRSCPHPSE 177
             F  QE   N +I   +  + +P  G      L A+  DVNG+    +F  L       S 
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LL------SH 51806

Query: 178   TVVMSKHTFWEPIKVHD------------IRWNFEKFLV 204
              VV         +K H             I WNF KFLV
Sbjct: 51805 RVVSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01013321.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296061697, whole genome shotgun sequence
          Length = 1281

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 115 FPCNQFGKQEPGDNLEILPGLKYVR 139
           FPC  FG Q  GD  + LPG+ + R
Sbjct: 281 FPCLAFGHQVSGDRFKTLPGIGWNR 355


>gb|AAXJ01000030.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296186992,
             whole genome shotgun sequence
          Length = 94758

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 115   FPCNQFGKQEPGDNLEILPGLKYVR 139
             FPC  FG Q  GD  + LPG+ + R
Sbjct: 45928 FPCLAFGHQVSGDRFKTLPGIGWNR 45854


>gb|AAXJ01007251.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296742926, whole genome shotgun sequence
          Length = 2046

 Score = 28.9 bits (63), Expect = 7.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 115 FPCNQFGKQEPGDNLEILPGLKYVR 139
           FPC  FG Q  GD  + LPG+ + R
Sbjct: 432 FPCLAFGHQFSGDRFKTLPGIGWNR 358


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.323    0.140    0.441 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,696,892
Number of Sequences: 23491
Number of extensions: 375994
Number of successful extensions: 1722
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1722
length of query: 237
length of database: 28,681,891
effective HSP length: 103
effective length of query: 134
effective length of database: 26,262,318
effective search space: 3519150612
effective search space used: 3519150612
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000103_1.0 # Protein # Glutathione peroxidase 6 (GPx6) #
Mus musculus # Complete
         (221 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    34   0.22 
gb|AAXJ01007161.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   7.1  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 47/153 (30%), Positives = 58/153 (37%), Gaps = 24/153 (15%)
 Frame = -2

Query: 60    AGKHILFVNVASFCGLT-ATYPELNTLQEELKPFNVTVLGFPCN---------------Q 103
             +G  +L  NVAS  GLT A Y     L ++       ++GFP                 Q
Sbjct: 52147 SGDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQ 51968

Query: 104   FGKQEPGKNSEIL-LGLKYVRPGGGYVPN-FQLFEKGDVNGDNEQKVFSFLKN----SCP 157
             F  QE   N +I       ++P  G     F L E  DVNGD    VF  L +    S  
Sbjct: 51967 FLNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQY 51788

Query: 158   PTSELFGSPEHLFWDPM--KVHDIRWNFEKFLV 188
                  F       +DP   K   I WNF KFLV
Sbjct: 51787 RVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLV 51689


>gb|AAXJ01007161.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296376308, whole genome shotgun sequence
          Length = 2078

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 158 PTSELFGSPEHLFWDPMKVHDIRWNFEKFLVGPDGVPVMR 197
           P +  F SP H  W     +DIRW  +   +GP G+ + R
Sbjct: 973 PKARDFSSPSHPIW-----YDIRWARK*HTLGPVGLEIQR 869


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.320    0.139    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,387,725
Number of Sequences: 23491
Number of extensions: 359348
Number of successful extensions: 1508
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1508
length of query: 221
length of database: 28,681,891
effective HSP length: 102
effective length of query: 119
effective length of database: 26,285,809
effective search space: 3128011271
effective search space used: 3128011271
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000104_1.0 # Protein # Glutathione peroxidase 7 (GPx7) #
Mus musculus # Complete
         (186 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    41   3e-05
gb|AAXJ01000152.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   2.3  
gb|AAXJ01001031.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   6.7  
gb|AAXJ01000639.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   8.7  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 40.8 bits (94), Expect(2) = 3e-05
 Identities = 41/153 (26%), Positives = 57/153 (37%), Gaps = 47/153 (30%)
 Frame = -2

Query: 44    GSVSLVVNVASECGFTDQNYRALQQLQRDLGPHHFNVLAFPC---------------NQF 88
             G V LV NVAS+ G T   Y+   +L +  G   F ++ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 89    GQQEPDTNREIENFAR---RTY----SVSFPMFSKIAVTGTGAHPAF------------- 128
               QE  TN++I++F     + Y       F +     V G  A P F             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 129   ---KYLTQTSG---------KEPTWNFWKYLVD 149
                ++L   SG         K   WNF K+LV+
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLVN 51686



 Score = 24.3 bits (51), Expect(2) = 3e-05
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 23    DFYDFKAVNIRGKLVSLEKYRGS 45
             +FY   A  I G++++ EK+RG+
Sbjct: 52260 NFYKLSAPLINGEVLNFEKFRGT 52192


>gb|AAXJ01000152.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296282638,
             whole genome shotgun sequence
          Length = 55873

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 142   NFWKYLVDPDGKVVGAWDPTV 162
             ++W+ +VDP G ++ +WD TV
Sbjct: 38832 SYWEQMVDPQGWIIRSWDRTV 38770


>gb|AAXJ01001031.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296084609,
             whole genome shotgun sequence
          Length = 15453

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 4     AVATAWLLLWAAACAQSEQDFYDFKA 29
             ++AT W  LW AA   + +  +DFKA
Sbjct: 12043 SIATRWRTLWRAAMMSTVEAIHDFKA 12120


>gb|AAXJ01000639.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296659418,
             whole genome shotgun sequence
          Length = 22824

 Score = 28.1 bits (61), Expect = 8.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 139   PTWNFWKYLVDPDGKVVGAWDPTVPVAEIK 168
             PT+ F +  VDP   V+GA  P  PVA+++
Sbjct: 16399 PTYAFSRIGVDPSSIVLGAGVPPEPVADLR 16488


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.321    0.134    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,766,158
Number of Sequences: 23491
Number of extensions: 265305
Number of successful extensions: 1122
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of query: 186
length of database: 28,681,891
effective HSP length: 100
effective length of query: 86
effective length of database: 26,332,791
effective search space: 2264620026
effective search space used: 2264620026
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000105_1.0 # Protein # Glutathione peroxidase 8 (GPx8) #
Mus musculus # Complete
         (209 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    38   3e-04
gb|AAXJ01003192.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   8.3  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 38.1 bits (87), Expect(3) = 3e-04
 Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 48/154 (31%)
 Frame = -2

Query: 67    GKASLVVNVASDCRFTDKSYQTLRELHKEFGPYHFNVLAFPC---------------NQF 111
             G   LV NVAS    T   Y+   EL ++FG   F ++ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 112   GESEPKSSKEVESFA----RQNYGVTFPIF---HKIKILGPEAEPAF------------- 151
                E K++K+++ F     +   GV   +F       + G +A P F             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 152   ---RFI----------VDSSKKEPRWNFWKYLVN 172
                RF+          +  SK  P WNF K+LVN
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIP-WNFGKFLVN 51686



 Score = 21.9 bits (45), Expect(3) = 3e-04
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -3

Query: 41    KPRT--NSFYSFEVKDAKGRTVSLEKFKG 67
             KPR   ++FY        G  ++ EKF+G
Sbjct: 52281 KPRVTVDNFYKLSAPLINGEVLNFEKFRG 52195



 Score = 20.4 bits (41), Expect(3) = 3e-04
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 175   GQVVKFWRPEE 185
             G+VV FW P+E
Sbjct: 51624 GEVVCFWDPKE 51592


>gb|AAXJ01003192.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296644994,
            whole genome shotgun sequence
          Length = 4833

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 149  PAFRFIVDSSKKEPRWN-FWKYLVNPEGQVVKFWRPEEPLEAIRP 192
            P  R  +D + K  RW   WK    PEG  V+ + P  PL   RP
Sbjct: 1261 PLCRRPLDLASKVSRWRRSWKERHLPEGWPVESYAPHRPLS*CRP 1127


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.322    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,768,205
Number of Sequences: 23491
Number of extensions: 278776
Number of successful extensions: 1379
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of query: 209
length of database: 28,681,891
effective HSP length: 102
effective length of query: 107
effective length of database: 26,285,809
effective search space: 2812581563
effective search space used: 2812581563
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000086_1.0 # Protein # Glutathione peroxidase 4 (GPx4) #
Drosophila melanogaster # Complete
         (238 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    55   8e-08
gb|AAXJ01008608.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   8.0  
gb|AAXJ01000344.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   8.0  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 47/162 (29%)
 Frame = -2

Query: 102   GKVVLVVNIASKCGLTKNNYEKLTDLKEKYGERGLVILNFPC---------------NQF 146
             G VVLV N+ASK GLT+  Y+   +L +K+G+RG  I+ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 147   GSQMPEADGEAMVCHLRDSKADIGEVFAKV-----------DVNGDNAAPLY-------- 187
              +Q  + + +     + D   DI + +  V           DVNGD A+P++        
Sbjct: 51964 LNQEMKTNKD-----IDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRV 51800

Query: 188   -----------KYLKAKQTGTLGSG--IKWNFTKFLVNKEGV 216
                        KY        LG    I WNF KFLVNK+ V
Sbjct: 51799 VSQYRVCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLVNKKYV 51674


>gb|AAXJ01008608.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296583614, whole genome shotgun sequence
          Length = 1768

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 21/85 (24%), Positives = 35/85 (41%)
 Frame = +2

Query: 14  LRCYSMRRTPGPVLELSRGQRQCLRLCTIMLPVSCAATPMNAISSAAQHSTAAAIDMSAN 73
           L+CY +      +LE  +  R+CLR C   + V   + P         H + + I     
Sbjct: 269 LQCYDVAHCSSGILESQQQLRRCLRWCQDGVVVFARSNPARYGVFPQGHQSPSII----V 436

Query: 74  GDYKNAASIYEFTVKDTHGNDVSLE 98
           GD    +SI   + +  HG +  +E
Sbjct: 437 GDMPRGSSIKHLSSEVPHGVEGPVE 511


>gb|AAXJ01000344.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296451426,
             whole genome shotgun sequence
          Length = 33632

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 21/85 (24%), Positives = 35/85 (41%)
 Frame = -3

Query: 14    LRCYSMRRTPGPVLELSRGQRQCLRLCTIMLPVSCAATPMNAISSAAQHSTAAAIDMSAN 73
             L+CY +      +LE  +  R+CLR C   + V   + P         H + + I     
Sbjct: 31746 LQCYDVAHCSSGILESQQQLRRCLRWCQDGVVVFARSNPARYGVFPQGHQSPSII----V 31579

Query: 74    GDYKNAASIYEFTVKDTHGNDVSLE 98
             GD    +SI   + +  HG +  +E
Sbjct: 31578 GDMPRGSSIKHLSSEVPHGVEGPVE 31504


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.318    0.133    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,616,570
Number of Sequences: 23491
Number of extensions: 292891
Number of successful extensions: 1429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of query: 238
length of database: 28,681,891
effective HSP length: 103
effective length of query: 135
effective length of database: 26,262,318
effective search space: 3545412930
effective search space used: 3545412930
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000082_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Caenorhabditis elegans # Complete
         (163 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    58   6e-09
gb|AAXJ01000606.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   8.6  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 49/156 (31%), Positives = 64/156 (41%), Gaps = 45/156 (28%)
 Frame = -2

Query: 24    GKVLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVLAFPC---------------NQF 68
             G V+++ NVAS+ GLT   Y    EL   +   G +++ FP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 69    AGQEPSCEIDIQAFVADKFKFEPTLFQKI-------DVNGDKQSPLF------------- 108
               QE     DI  FV D  K  P +  K+       DVNGDK SP+F             
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 109   ---KFLKNEKGGFMFD-------AIKWNFTKFLVGR 134
                +FLK   G  ++D        I WNF KFLV +
Sbjct: 51784 VCHRFLKYHSG--LYDPKLGKSKPIPWNFGKFLVNK 51683


>gb|AAXJ01000606.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296756508,
             whole genome shotgun sequence
          Length = 23862

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 89    FEPTLFQKIDVNGDKQSPLFKFLKNE 114
             ++ TL++ I  NG K+ PL++ LKN+
Sbjct: 20523 YQHTLYRSIRHNGTKRWPLYEVLKNQ 20446


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.319    0.139    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,620,627
Number of Sequences: 23491
Number of extensions: 147372
Number of successful extensions: 505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of query: 163
length of database: 28,681,891
effective HSP length: 98
effective length of query: 65
effective length of database: 26,379,773
effective search space: 1714685245
effective search space used: 1714685245
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000083_1.0 # Protein # Glutathione peroxidase 5 (GPx5) #
Caenorhabditis elegans # Complete
         (126 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01013597.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   4.4  
gb|AAXJ01011509.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   4.4  
gb|AAXJ01010252.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   4.4  
gb|AAXJ01002232.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    27   5.7  

>gb|AAXJ01013597.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296682614,
            whole genome shotgun sequence
          Length = 1263

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +2

Query: 12   MNISMTTSPWHFSKFQMIS-----DARIGLYINSSLFPIFSTVC 50
            +++S   SPW F +F++ S     +    LYI   L+P+  T+C
Sbjct: 1115 ISVSGLLSPWWFGQFRIRSLRGSRNGSSSLYIFVKLYPLCHTLC 1246


>gb|AAXJ01011509.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296501196, whole genome shotgun sequence
          Length = 1431

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +1

Query: 12  MNISMTTSPWHFSKFQMIS-----DARIGLYINSSLFPIFSTVC 50
           +++S   SPW F +F++ S     +    LYI   L+P+  T+C
Sbjct: 499 ISVSGLLSPWWFGQFRIRSLRGSRNGSSSLYIFVKLYPLCHTLC 630


>gb|AAXJ01010252.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296723454, whole genome shotgun sequence
          Length = 1560

 Score = 27.7 bits (60), Expect = 4.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +3

Query: 12  MNISMTTSPWHFSKFQMIS-----DARIGLYINSSLFPIFSTVC 50
           +++S   SPW F +F++ S     +    LYI   L+P+  T+C
Sbjct: 765 ISVSGLLSPWWFGQFRIRSLRGSRNGSSSLYIFVKLYPLCHTLC 896


>gb|AAXJ01002232.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296648810,
            whole genome shotgun sequence
          Length = 6864

 Score = 27.3 bits (59), Expect = 5.7
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 8    SNCSMNISMTTSPWHFSKFQMISDARIGLY 37
            +NC M +S+  S WH+  ++ +SD R  LY
Sbjct: 3626 TNCEM-MSIVGSSWHWCTYRKVSDYRDRLY 3712


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.353    0.152    0.558 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,951,363
Number of Sequences: 23491
Number of extensions: 145373
Number of successful extensions: 1719
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 478
Number of HSP's gapped (non-prelim): 1304
length of query: 126
length of database: 28,681,891
effective HSP length: 93
effective length of query: 33
effective length of database: 26,497,228
effective search space: 874408524
effective search space used: 874408524
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 57 (26.6 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000093_1.0 # Protein # Glutathione peroxidase 1 (GPx1) #
Saccharomyces cerevisiae # Complete
         (167 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    45   7e-05
gb|AAXJ01001415.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   1.4  
gb|AAXJ01000142.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   9.1  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 50/154 (32%), Positives = 64/154 (41%), Gaps = 45/154 (29%)
 Frame = -2

Query: 26    VVLIVNVASHCAFTP-QYKELEYLYEKYKSHGLVIVAFP------CG---------QFGN 69
             VVL+ NVAS    T  QYK    L +K+   G  IV FP      C          QF N
Sbjct: 52138 VVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQFLN 51959

Query: 70    QEFEKDKEINKFCQDKY----GV---TFPILHKIRCNGQKQDPVY--------------- 107
             QE + +K+I+ F  D      GV    F +      NG K  PV+               
Sbjct: 51958 QEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYRVC 51779

Query: 108   -KFLK------NSVSGKSGIKMIKWNFEKFVVDR 134
              +FLK      +   GKS  K I WNF KF+V++
Sbjct: 51778 HRFLKYHSGLYDPKLGKS--KPIPWNFGKFLVNK 51683


>gb|AAXJ01001415.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296616256,
            whole genome shotgun sequence
          Length = 11269

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 107  YKFLKNSVSGKSGIKMIKWNFEKFVVDR 134
            YK L  S SG+  + +IKW + + ++DR
Sbjct: 4917 YKVLHGSGSGREDLSIIKWKYREGIIDR 5000


>gb|AAXJ01000142.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296300174,
            whole genome shotgun sequence
          Length = 57048

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 84   DKYGVTFPILHKIRCNGQKQDPVYKFLKNSVSGKSGIKMIKWNFEKFVVD 133
            D +GVT  IL ++     + D +   +K  + G+ G+K+I  +    VVD
Sbjct: 8722 DLHGVTHLILDEVHERSTEMDVLLGVVKAHLVGRGGLKIILMSASASVVD 8871


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.322    0.140    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,913,146
Number of Sequences: 23491
Number of extensions: 247266
Number of successful extensions: 872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of query: 167
length of database: 28,681,891
effective HSP length: 98
effective length of query: 69
effective length of database: 26,379,773
effective search space: 1820204337
effective search space used: 1820204337
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000094_1.0 # Protein # Glutathione peroxidase 2 (GPx2) #
Saccharomyces cerevisiae # Complete
         (162 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    56   3e-08
gb|AAXJ01001285.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   1.3  
gb|AAXJ01006197.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    29   3.8  
gb|AAXJ01000236.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   5.0  
gb|AAXJ01007253.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    28   8.5  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 53/153 (34%), Positives = 68/153 (44%), Gaps = 43/153 (28%)
 Frame = -2

Query: 25    GKVVLIVNVASKCGFTP-QYKELEELYKKYQDKGFVILGFP------------------- 64
             G VVL+ NVASK G T  QYK   EL +K+ D+GF I+GFP                   
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 65    CNQFGKQEPGSDEQITEFCQLNYGV---TFPIMKKIDVNGSNADSVYNYLKSQK------ 115
              NQ  K     D+ +T+  +   GV    F + +  DVNG  A  V+  L S +      
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 116   ---------AGL----LG-FKGIKWNFEKFLVD 134
                      +GL    LG  K I WNF KFLV+
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLVN 51686


>gb|AAXJ01001285.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296760712,
            whole genome shotgun sequence
          Length = 12543

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/83 (26%), Positives = 39/83 (46%)
 Frame = +2

Query: 73   PGSDEQITEFCQLNYGVTFPIMKKIDVNGSNADSVYNYLKSQKAGLLGFKGIKWNFEKFL 132
            P  DEQ   FC+  + V  P    + V GS+ + +  + KS+ + +    G +  F+K  
Sbjct: 4091 PREDEQSFSFCRYLWPVLVPSTHFLSVAGSSTECLQRFTKSESSSMSSI-GTENEFKK-- 4261

Query: 133  VDSNGKVVQRFSSLTKPSSLDQE 155
               + K   R S+++  +SL  E
Sbjct: 4262 ---SRKFALRTSAISIANSLAME 4321


>gb|AAXJ01006197.1| Perkinsus marinus ATCC 50983 strain ATCC 50983
           gcontig_1104296295820, whole genome shotgun sequence
          Length = 2402

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 83  CQLNYGVTFPIMKKIDVNGSNADSVYNYLKSQKAGLLGF 121
           C+L+Y V F +++++  + S   S+ ++  S  AGL  F
Sbjct: 820 CRLHYAVLFAVVERVTCDRSQGCSIQSWSTSFVAGLFNF 936


>gb|AAXJ01000236.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296479506,
             whole genome shotgun sequence
          Length = 42255

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 84    QLNYGVTFPIMKKIDVNGSNADSVYNY 110
             QL    T P MK++D   S  DSVYNY
Sbjct: 28101 QLQSVPTHPCMKRVDSRISLTDSVYNY 28021


>gb|AAXJ01007253.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296686124,
            whole genome shotgun sequence
          Length = 2046

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 105  DSVYNY-LKSQKAGLLGFKGIKWNFEKFLVDSNGKVVQRFSSLTKPSSLDQ 154
            DS+ N  L     GLLG   +  N +  L++ NG +VQ    L    SLD+
Sbjct: 1564 DSIINDGLLLHSDGLLGMDTLSINADGLLININGSLVQASKFLCSSHSLDK 1716


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,688,038
Number of Sequences: 23491
Number of extensions: 163204
Number of successful extensions: 501
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of query: 162
length of database: 28,681,891
effective HSP length: 98
effective length of query: 64
effective length of database: 26,379,773
effective search space: 1688305472
effective search space used: 1688305472
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000095_1.0 # Protein # Glutathione peroxidase 3 (GPx3) #
Saccharomyces cerevisiae # Complete
         (163 letters)

Database: genome.fa 
           23,491 sequences; 86,045,674 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    55   4e-08
gb|AAXJ01001285.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   1.7  
gb|AAXJ01001034.1| Perkinsus marinus ATCC 50983 strain ATCC 5098...    30   1.7  

>gb|AAXJ01000003.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296289474,
             whole genome shotgun sequence
          Length = 212936

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 53/155 (34%), Positives = 72/155 (46%), Gaps = 43/155 (27%)
 Frame = -2

Query: 24    GKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPC---------------NQF 67
             G VVL+ NVASK G T  QYK    L +++ D GF I+GFP                 QF
Sbjct: 52144 GDVVLVANVASK*GLTQAQYKLFGELGQKFGDRGFKIVGFPSR*VSHCSHLWMLLVFRQF 51965

Query: 68    GHQEPGSDEEIAQF----CQLNYGV---TFPIMKKIDVNGGNEDPVYKFLKSQK------ 114
              +QE  ++++I  F     +   GV    F + +  DVNG    PV++ L S +      
Sbjct: 51964 LNQEMKTNKDIDDFVTDILKPYPGVKDKVFLLAEPCDVNGDKASPVFE*LLSHRVVSQYR 51785

Query: 115   ---------SGM----LG-LRGIKWNFEKFLVDKK 135
                      SG+    LG  + I WNF KFLV+KK
Sbjct: 51784 VCHRFLKYHSGLYDPKLGKSKPIPWNFGKFLVNKK 51680


>gb|AAXJ01001285.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296760712,
            whole genome shotgun sequence
          Length = 12543

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 72   PGSDEEIAQFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEK 129
            P  DE+   FC+  + V  P    + V G + + + +F KS+ S M  + G +  F+K
Sbjct: 4091 PREDEQSFSFCRYLWPVLVPSTHFLSVAGSSTECLQRFTKSESSSMSSI-GTENEFKK 4261


>gb|AAXJ01001034.1| Perkinsus marinus ATCC 50983 strain ATCC 50983 gcontig_1104296592102,
             whole genome shotgun sequence
          Length = 15412

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 36    CGFTPQYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFC 82
             CGF P  +ELE  +  Y  +    +G  C+ FGH   G   E+ +FC
Sbjct: 12592 CGFDPARRELEHAHDPY-CQLEEAVGIRCS-FGHIHSGLPAELMRFC 12726


  Database: genome.fa
    Posted date:  Jan 16, 2009 12:51 PM
  Number of letters in database: 86,045,674
  Number of sequences in database:  23,491
  
Lambda     K      H
   0.317    0.139    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,575,601
Number of Sequences: 23491
Number of extensions: 187148
Number of successful extensions: 563
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of query: 163
length of database: 28,681,891
effective HSP length: 98
effective length of query: 65
effective length of database: 26,379,773
effective search space: 1714685245
effective search space used: 1714685245
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
