T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:1 sec.
SCORE=77
*
 BAD AVG GOOD
*
gi|145680675|gb   :  73
SPP00000015_1.0   :  78
SPP00000088_1.0   :  80
gi|5174415|ref|   :  73
gi|28574275|ref   :  79
cons              :  77

gi|145680675|gb   ---------------------------------------------
SPP00000015_1.0   M-------AGYE---------------------------------
SPP00000088_1.0   M-------GCMR---------------------------------
gi|5174415|ref|   M-------SGHRSTRKRCGDSHPESPVGFGHMSTTGCVLNKLFQL
gi|28574275|ref   MRQLFRRLMNHQ---------------------------------

cons                                                           


gi|145680675|gb   ---FISKEGLQSLHNYSFKGEDHSFCANHILAPFIWEPLLKNVIP
SPP00000015_1.0   ---YVSPEQLAGFDKYKYSAVDTNPLSLYVMHPF-WNTIVK-VFP
SPP00000088_1.0   ---YLSEAHLRGFERYKYSSIDTSFLSVYVMHPF-WNYCVK-FVP
gi|5174415|ref|   PTPPLSRHQLKRLEEHRYQSAGRSLLE-PLMQGY-WEWLVR-RVP
gi|28574275|ref   ---YLTQDQINGFDNYKYSAIDTSPLSQYVMHPF-WDWLVK-FFP

cons                  ::   :  :..: :.. . .     ::  : *:  ::  .*


gi|145680675|gb   RWLAPNILTTVGFISMTFAWIVLAIAT--------PTGTEPIHPI
SPP00000015_1.0   TWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS--APGHKHVPDW
SPP00000088_1.0   KWLAPNVLTFVGFLMTVVNFILIAYYDWGFEAANSETGN-TVPAW
gi|5174415|ref|   SWIAPNLITIIGLSINICTTILLVFYC--------PTATEQAPLW
gi|28574275|ref   RWFAPNLMTFLGFLFSAMNLVLLSYYDWNFDASSGEEGTTPIPSW

cons               *:***::*  *:       :::                    


gi|145680675|gb   VYLLTIICIFIYQIADNIDGRQARRTKNATPLGELFDHGNDSLMI
SPP00000015_1.0   VWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSC
SPP00000088_1.0   VWTVAAINILIYYNLDGMDGKQARRTGTSGPLGELFDHGLDSYSA
gi|5174415|ref|   AYIACACGLFIYQSLDAIDGKQARRTNSSSPLGELFDHGCDSLST
gi|28574275|ref   VWLCTAINIFLAYTLDGIDGKQARRIGLSGPLGELFDHGLDSYTA

cons              .:       ::    * :**:****   : ********* **   


gi|145680675|gb   GIFAL--VVVLALRT---T---TILTLSVLLMLYLIFFLSHWEEY
SPP00000015_1.0   VYFVV--TVYSIFGRG-STGVSVFVLYLLLWVVLFSFILSHWEKY
SPP00000088_1.0   ALIPI--YLFSLFGT---HDLPPIRMFFVIWNVFLNFYLTHVEKY
gi|5174415|ref|   VFVVLGTCIAVQLGT------NPDWMFFCCFAGTFMFYCAHWQTY
gi|28574275|ref   MLIPT--CLYSIFGRSRVYSVRPMRMYYVCLTVYFNFFISHWEKY

cons                    :   :                     : *  :* : *


gi|145680675|gb   HTGVLILGPLLNPTELQLMVIGMLLGETVYS-DII-SISI----F
SPP00000015_1.0   NTGILFLPWGYDISQVTIS--FVYIVTAVVGVEAWYEPFL----F
SPP00000088_1.0   NTGVMFLPWGYDFTMWGVS--GMLFVATVFGPEMY-RFSI----Y
gi|5174415|ref|   VSGTLRFGI-IDVTEVQIFIIIMHLLAVIGGPPFW-QSMIPVL--
gi|28574275|ref   NTGILYLPWGYDLSMWGST--AMYLVTWWMGFERW-KFELPLGSY

cons               :* : :    : :        : :     .        :     


gi|145680675|gb   G-FQINTTIAYCVI-FGAFGALAMYSYNVYAFIK-E-TKKCSFKD
SPP00000015_1.0   N-FLYRDLFTAMIIGCALCVTLPMSLLNFFRSYKNNTLKLNSVYE
SPP00000088_1.0   G-FTMANMFEFVLIGSGMVSSHPIIARNIYLSYKNKTGKMRPMWE
gi|5174415|ref|   N-IQM-KIFPALCTVAGTIFSCTNYFRVIFTGGVGKNGSTIAGTS
gi|28574275|ref   GTLPLGNVMEAVLHVSA-MANLPLVIINVYNSYAHRTGRLLSFWE

cons              . :     :       .     .     .:     .      .


gi|145680675|gb   SLKRLFPFMQFFIL-------------------------------
SPP00000015_1.0   AMVPLFSPCLLFILSTAWILW--SPSDILELHPRVFYFMVGTAFA
SPP00000088_1.0   MLRPFFAFVWLFVITVVWSFF--SRNDVINKEPRILWILYGTIFS
gi|5174415|ref|   VLSPFLHIG--SVITLAAMIYKKSAVQLFEKHPCLYILTFGFVSA
gi|28574275|ref   AVRPMWPFITYFVILLAWPYV--SPNDIMEKDPRAIFMLSGTIFS

cons               :  :       ::                               


gi|145680675|gb   ---------------------------------------------
SPP00000015_1.0   NSTCQLIVCQMSSTRCPTLNWLLVPLFLVV------LV---VNLG
SPP00000088_1.0   NIACRLIVAQMSDTRCDAFNVLMWPLAATVGVCCFPYYQQVFDSD
gi|5174415|ref|   KITNKLVVAHMTKSEMHLHDTAFIGP-ALL------FL----DQY
gi|28574275|ref   NVSCRLIVSQMSVTRCEAWHWQ-TPMFILS------FL----TSL

cons                                                           


gi|145680675|gb   ---------------------------------------------
SPP00000015_1.0   VASYVES-ILLYTLTTAFTLAHIHYGVRVVKQLSSHFQIYPFSLR
SPP00000088_1.0   LTSDTER-WILYGLTIFSTLAHWHYGYGVVSEMCDHFHIRCFKVR
gi|5174415|ref|   FNSFIDEYIVLWIALVFSFFDLIRYCVSVCNQIASHLHIHVFRIK
gi|28574275|ref   WIPLLER-PLLYLLLIVTTLSHWQYGASVVNQMCEHFNRVCFTVH

cons                                                           


gi|145680675|gb   -----------------------------------T
SPP00000015_1.0   KPNSDULGM--------------------EEKNIGL
SPP00000088_1.0   KSSSQ-SGSDIT---------QLLQNNNKIKPLKSH
gi|5174415|ref|   VSTAH---------------------------SNHH
gi|28574275|ref   KRVPQ-EELPKKKTLLAEEISQADKPQAEEPLKKDI

cons