T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:1 sec.
SCORE=71
*
 BAD AVG GOOD
*
gi|167390104|re   :  65
SPP00000015_1.0   :  74
SPP00000088_1.0   :  75
gi|5174415|ref|   :  68
gi|28574275|ref   :  74
cons              :  71

gi|167390104|re   M--------------------------------------------
SPP00000015_1.0   M-------AGY----------------------------------
SPP00000088_1.0   M-------GCM----------------------------------
gi|5174415|ref|   M-------SGHRSTRKRCGDSHPESPVGFGHMSTTGCVLNKLFQL
gi|28574275|ref   MRQLFRRLMNH----------------------------------

cons              *                                            


gi|167390104|re   ---FISKEGLQSLHNYSFKGEDHSFCANHILAPFIWEPLLKNVIP
SPP00000015_1.0   --EYVSPEQLAGFDKYKYSAVDTNPLSLYVMHPF-WNTIVK-VFP
SPP00000088_1.0   --RYLSEAHLRGFERYKYSSIDTSFLSVYVMHPF-WNYCVK-FVP
gi|5174415|ref|   PTPPLSRHQLKRLEEHRYQSAGRSLLE-PLMQGY-WEWLVR-RVP
gi|28574275|ref   --QYLTQDQINGFDNYKYSAIDTSPLSQYVMHPF-WDWLVK-FFP

cons                  ::   :  :..: :.. . .     ::  : *:  ::  .*


gi|167390104|re   RWLAPNILTTVGFISMTFAWIVLAIAT--------PTGTEPIHPI
SPP00000015_1.0   TWLAPNLITFSGFLLVVFNFLLMAYFDPDFYAS--APGHKHVPDW
SPP00000088_1.0   KWLAPNVLTFVGFLMTVVNFILIAYYDWGFEAANSETG-NTVPAW
gi|5174415|ref|   SWIAPNLITIIGLSINICTTILLVFYC--------PTATEQAPLW
gi|28574275|ref   RWFAPNLMTFLGFLFSAMNLVLLSYYDWNFDASSGEEGTTPIPSW

cons               *:***::*  *:       :::              .       


gi|167390104|re   VYLLTIICIFIYQIADNIDGRQARRTKNATPLGELFDHGNDSLMI
SPP00000015_1.0   VWIVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSC
SPP00000088_1.0   VWTVAAINILIYYNLDGMDGKQARRTGTSGPLGELFDHGLDSYSA
gi|5174415|ref|   AYIACACGLFIYQSLDAIDGKQARRTNSSSPLGELFDHGCDSLST
gi|28574275|ref   VWLCTAINIFLAYTLDGIDGKQARRIGLSGPLGELFDHGLDSYTA

cons              .:       ::    * :**:****   : ********* **   


gi|167390104|re   GIFAL--VVVLALRT------TTILTLSVLLMLYLIFFLSHWEEY
SPP00000015_1.0   VYFVV--TVYSIFGRG-STGVSVFVLYLLLWVVLFSFILSHWEKY
SPP00000088_1.0   ALIPI--YLFSLFGT---HDLPPIRMFFVIWNVFLNFYLTHVEKY
gi|5174415|ref|   VFVVLGTCIAVQLGT------NPDWMFFCCFAGTFMFYCAHWQTY
gi|28574275|ref   MLIPT--CLYSIFGRSRVYSVRPMRMYYVCLTVYFNFFISHWEKY

cons                .     :   :                     : *  :* : *


gi|167390104|re   HTGVLILGPLLNPTELQLMVIGMLLGETVYS-DII-SISI----F
SPP00000015_1.0   NTGILFLPWGYDISQVTI--SFVYIVTAVVGVEAWYEPFL----F
SPP00000088_1.0   NTGVMFLPWGYDFTMWGV--SGMLFVATVFGPEMY-RFSI----Y
gi|5174415|ref|   VSGTLRFG-IIDVTEVQIFIIIMHLLAVIGGPPFW-QSMIPV--L
gi|28574275|ref   NTGILYLPWGYDLSMWGS--TAMYLVTWWMGFERW-KFELPLGSY

cons               :* : :    : :        : :     .        :     


gi|167390104|re   G-FQINTTIAYCVI-FGAFGALAMYSYNVYAFIK--ETKKCSFKD
SPP00000015_1.0   N-FLYRDLFTAMIIGCALCVTLPMSLLNFFRSYKNNTLKLNSVYE
SPP00000088_1.0   G-FTMANMFEFVLIGSGMVSSHPIIARNIYLSYKNKTGKMRPMWE
gi|5174415|ref|   N-IQMKIFPALCTV-AGTIFSCTNYFRVIFTGGVGKNGSTIAGTS
gi|28574275|ref   GTLPLGNVMEAVLHVSA-MANLPLVIINVYNSYAHRTGRLLSFWE

cons              . :             .     .     .:           .  .


gi|167390104|re   SLKRLFPFMQFFILTGILFLLTDELFIRNNFHSIVAITILLNAFI
SPP00000015_1.0   AMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMVGTAFANS
SPP00000088_1.0   MLRPFFAFVWLFVITVVWSFFSRNDVINKEPRILWILYGTIFSNI
gi|5174415|ref|   VLSPFLHIGSVITLAAMIYKKSAVQLFEKHPCLYILTFGFVSAKI
gi|28574275|ref   AVRPMWPFITYFVILLAWPYVSPNDIMEKDPRAIFMLSGTIFSNV

cons               :  :      : :       :   .:. .            :  


gi|167390104|re   TQRIILNRICKEEVNLYYYINI-IYAIY------VF----L--MV
SPP00000015_1.0   TCQLIVCQMSSTRCPTLNWLLVPLFLVV------LV---VNLGVA
SPP00000088_1.0   ACRLIVAQMSDTRCDAFNVLMWPLAATVGVCCFPYYQQVFDSDLT
gi|5174415|ref|   TNKLVVAHMTKSEMHLHDTAFI-GPALL------FL----DQYFN
gi|28574275|ref   SCRLIVSQMSVTRCEAWHWQT-PMFILS------FL----TSLWI

cons              : :::: ::   .                                


gi|167390104|re   CNIQKDLITFIMLLISIGQESLFAISVSLTMSKEIGINKCLIVIL
SPP00000015_1.0   SYVESI-LLYTLTTAFTLAHIHY----------------------
SPP00000088_1.0   SDTERW-ILYGLTIFSTLAHWHY----------------------
gi|5174415|ref|   SFIDEYIVLWIALVFSFFDLIRY----------------------
gi|28574275|ref   PLLERP-LLYLLLIVTTLSHWQY----------------------

cons                 :   : :            :                      


gi|167390104|re   PYFYNYSVNIFNYSNYIHLINHSNLLYSIFFHTCGVIS--NSGFD
SPP00000015_1.0   --------------------------------GVRVVKQLSSHFQ
SPP00000088_1.0   --------------------------------GYGVVSEMCDHFH
gi|5174415|ref|   --------------------------------CVSVCNQIASHLH
gi|28574275|ref   --------------------------------GASVVNQMCEHFN

cons                                                 * .   . :.


gi|167390104|re   IHIFNLGQADSQ-----------------LIVFPSGYSILMMW
SPP00000015_1.0   IYPFSLRKPNSDULG--------------------MEEKNIGL
SPP00000088_1.0   IRCFKVRKSSSQ-SGSD---------ITQLLQNNNKIKPLKSH
gi|5174415|ref|   IHVFRIKVSTAH---------------------------SNHH
gi|28574275|ref   RVCFTVHKRVPQ-EELPKKKTLLAEEISQADKPQAEEPLKKDI

cons                 * :    ..