T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:9 sec.
SCORE=72
*
BAD AVG GOOD
*
[selI_hsap]SPP0 : 69
[selI_dmel]SPP0 : 70
[choleth_hsap]g : 72
[choleth_dmel]g : 68
[yeast_choleth] : 67
[choleth_edis]g : 68
[choleth2_edis] : 72
[chol1_hsap]gi| : 70
[chol_dmel_poss : 71
[chol_Edis]gi|1 : 68
[put_selI_ehis] : 84
[put1_selI_edis : 88
[put2_selI.edis : 87
cons : 72
[selI_hsap]SPP0 MAG------------------------------------YEYVSP
[selI_dmel]SPP0 MGC------------------------------------MRYLSE
[choleth_hsap]g MSGHRSTRKRCGDSHPESPVGFGHMSTTGCVLNKLFQLPTPPLSR
[choleth_dmel]g MRQLFR-----------------------------RLMNHQYLTQ
[yeast_choleth] MG--------------------------------------YFVPD
[choleth_edis]g M----------------------------------------FISK
[choleth2_edis] M----------------------------------------FITE
[chol1_hsap]gi| MAAGAGAGS----------------------APRWLRALSEPLSA
[chol_dmel_poss MALLA-------------------------------YRDKHILSA
[chol_Edis]gi|1 MPCNLI-----------------------------K--FPLFVSE
[put_selI_ehis] -----------------------------------------FVSE
[put1_selI_edis -----------------------------------------FISK
[put2_selI.edis -----------------------------------------FITE
cons :.
[selI_hsap]SPP0 EQLAGFDKYKYSAVDTNPLSLYVMHP-FWNTIV-KVFPTWLAPNL
[selI_dmel]SPP0 AHLRGFERYKYSSIDTSFLSVYVMHP-FWNYCV-KFVPKWLAPNV
[choleth_hsap]g HQLKRLEEHRYQSAGRSLLEP-LMQG-YWEWLV-RRVPSWIAPNL
[choleth_dmel]g DQINGFDNYKYSAIDTSPLSQYVMHP-FWDWLV-KFFPRWFAPNL
[yeast_choleth] SHIENLKSYKYQSEDRSLVSKYFLKP-FWQRFC-HIFPTWMAPNI
[choleth_edis]g EGLQSLHNYSFKGEDHSFCANHILAPFIWEPLLKNVIPRWLAPNI
[choleth2_edis] KSLNNLKYYKYSGVDHSLCANYILSPYFWEPLLTHCIPRSIAPNM
[chol1_hsap]gi| AQLRRLEEHRYSAAGVSLLEP-PLQL-YWTWLL-QWIPLWMAPNS
[chol_dmel_poss QQLRKLSEHKYSCFSVSLLDP-LLQP-WWNWLV-AQTPLWLAPNL
[chol_Edis]gi|1 QGLDNLQYYKYNGVDLSIMVNYFLGPYFWNILI-EKFPMWLAPNM
[put_selI_ehis] QGLDNLQYYKYSGVDLSLMVNYFLGPYFWNILI-EKFPMWLAPNM
[put1_selI_edis EGLQSLHNYSFKGEDHSFCANHILAPFIWEPLLKNVIPRWLAPNI
[put2_selI.edis KSLNNLKYYKYSGVDHSLCANYILSPYFWEPLLTHCIPRSIAPNM
cons : : : :. . . : * * :***
[selI_hsap]SPP0 ITFSGFLLVVFNFLLMAYFDPDFY--ASAPGHKHVPDWVWIVVGI
[selI_dmel]SPP0 LTFVGFLMTVVNFILIAYYDWGFEAANSETG-NTVPAWVWTVAAI
[choleth_hsap]g ITIIGLSINICTTILLVFYCP--------TATEQAPLWAYIACAC
[choleth_dmel]g MTFLGFLFSAMNLVLLSYYDWNFDASSGEEGTTPIPSWVWLCTAI
[yeast_choleth] ITLSGFAFIVINVLTVFYYDP--------NLNTDTPRWTYFSYAL
[choleth_edis]g LTTVGFISMTFAWIVLAIATP--------TGTEPIHPIVYLLTII
[choleth2_edis] ITLIGGLFMVLAYILFVIESP--------TGTETVSTFTLVMSGI
[chol1_hsap]gi| ITLLGLAVNVVTTLVLISYCP--------TATEEAPYWTYLLCAL
[chol_dmel_poss ITIVGLILNVVTTLILICYSP--------NGVEAPPRWTCLLCAL
[chol_Edis]gi|1 ITLTGGLFMGVAMIMMNIFLD--------PNSEP-NIFINILVSI
[put_selI_ehis] ITLAGGLFMGMAMIIMNIFLG--------PNSEP-NILVNIFVCI
[put1_selI_edis LTTVGFISMTFAWIVLAIATP--------TGTEPIHPIVYLLTII
[put2_selI.edis ITLIGGLFMVLAYILFVIESP--------TGTETVSTFTLVMSGI
cons :* * : .
[selI_hsap]SPP0 LNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVYFVVTV
[selI_dmel]SPP0 NILIYYNLDGMDGKQARRTGTSGPLGELFDHGLDSYSAALIPIYL
[choleth_hsap]g GLFIYQSLDAIDGKQARRTNSSSPLGELFDHGCDSLSTVFVVLGT
[choleth_dmel]g NIFLAYTLDGIDGKQARRIGLSGPLGELFDHGLDSYTAMLIPTCL
[yeast_choleth] GVFLYQTFDGCDGVHARRINQSGPLGELFDHSIDAINSTLSIFIF
[choleth_edis]g CIFIYQIADNIDGRQARRTKNATPLGELFDHGNDSLMIGIFALVV
[choleth2_edis] LIFLYQTADNLDGKQARRTSNSSPLGELFDHGVDTFMMGIFSMII
[chol1_hsap]gi| GLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAVGA
[chol_dmel_poss GLFIYQSLDSIDGKQARRTNTSSPLGELFDHGCDSISTVFVALSA
[chol_Edis]gi|1 MIFLYQTADNLDGKQARRTKSSSPLGELFDHGVDSIMIGIFSLAV
[put_selI_ehis] MIFLYQTADNLDGKQARRTKSSSPLGELFDHGVDSIMIGIFSLAV
[put1_selI_edis CIFIYQIADNIDGRQARRTKNATPLGELFDHGNDSLMIGIFALVV
[put2_selI.edis LIFLYQTADNLDGKQARRTSNSSPLGELFDHGVDTFMMGIFSMII
cons :: * ** :*** . ********. *:
[selI_hsap]SPP0 YSIFGRG-STGVSVFVLYLLLWVVLFSFILSHWEKYNTGILFLPW
[selI_dmel]SPP0 FSLFG---THDLPPIRMFFVIWNVFLNFYLTHVEKYNTGVMFLPW
[choleth_hsap]g CIAVQL----GTNPDWMFFCCFAGTFMFYCAHWQTYVSGTLRFGI
[choleth_dmel]g YSIFGRSRVYSVRPMRMYYVCLTVYFNFFISHWEKYNTGILYLPW
[yeast_choleth] ASET----GMGFSYNLM-LSQFAMLTNFYLSTWEEYHTHTLYLSE
[choleth_edis]g VLALRT----TT--ILTLSVLLMLYLIFFLSHWEEYHTGVLILGP
[choleth2_edis] VIVFKF----DL--TTQLFIFIFLLTVFYMSHWEEYHTNTLVLGY
[chol1_hsap]gi| SIAARL----GTYPDWFFFCSFIGMFVFYCAHWQTYVSGMLRFGK
[chol_dmel_poss CISCQL----GHYPNWLFFQCFCAIALFYCAHWQTYVSGTMRFGR
[chol_Edis]gi|1 VLNLHQ----TT--TKCYLLMIILNTVFYMSHWEEYHVGTLVLGY
[put_selI_ehis] VLNLHQ----TT--TKCYLLMMALNTVFYMSHWEEYHVGTLVLGY
[put1_selI_edis VLALRT----TT--ILTLSVLLMLYLIFFLSHWEEYHTGVLI---
[put2_selI.edis VIVFKF----DL--TTQLFIFIFLLTVFYMSHWEEYHTNTLVLGY
cons * : : * :
[selI_hsap]SPP0 GYDISQ-VTIS-FV-YIVTAVVGVE-AWYEPFLFNF---------
[selI_dmel]SPP0 GYDFTM-WGVS-GM-LFVATVFGPE-MYR-FSIYGF---------
[choleth_hsap]g I-DVTEV-QIFIIIMHLLAVIGGPP-FWQ-SMIPVLNI-------
[choleth_dmel]g GYDLSM-WGST-AM-YLVTWWMGFE-RWK-FELPLGSYGT----L
[yeast_choleth] FSGPVEGILIV-CVSLILTGIYGKQVIWH-TYLFTITVGDKVIDV
[choleth_edis]g LLNPTEL-QLMVIGMLLGETVY-SD-IIS-ISIFGF---------
[choleth2_edis] IFNPTEL-QLLCIVGLFIIAIN-PN-IIY-LEIFGI---------
[chol1_hsap]gi| V-DVTEI-QIALVIVFVLSAFGGAT-MWD-YTIPILEI-------
[chol_dmel_poss I-DVTEA-QFSIIAIHLVSAALGPE-IWL-TKIPIVGL-------
[chol_Edis]gi|1 IMNPTEL-QYLTIGFLLFQGFF-PK-AGE-IIILII---------
[put_selI_ehis] IMNPTEL-QYLT---------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis IFNPTEL-QLLCI--------------------------------
cons
[selI_hsap]SPP0 LYRDL-FTAMIIGCALCVTLPMSLLNFFRSYKNNTLK-----LNS
[selI_dmel]SPP0 TMANM-FEFVLIGSGMVSSHPIIARNIYLSYKNKTGK-----MRP
[choleth_hsap]g QMKIF-PALCTVAGT-IFSCTNYFRVIFTGGVGKNGS-----TIA
[choleth_dmel]g PLGNV-MEAVLHVSA-MANLPLVIINVYNSYAHRTGR-----LLS
[yeast_choleth] DTLDIVFSLAVF--GLVMNALSAKRNVDKYYRNSTSSANNITQIE
[choleth_edis]g QINTT-IAYCVIFGA-FGALAMYSYNVYA-F------IKETKKCS
[choleth2_edis] TIQYW-AKYCIIGFA-SLANSYYFYSAFS-H------INKTHCCT
[chol1_hsap]gi| KLKIL-PVLGFLGGV-IFSCSNYFHVILHGGVGKNGS-----TIA
[chol_dmel_poss SWNYT-ILVFITFGY-TLNIINFLKMFTQGGSGKNGS-----SVA
[chol_Edis]gi|1 SINDL-IYYFILICC-ILGCFKYYLNVSH-W------AQKNNT-N
[put_selI_ehis] ---------------------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis ---------------------------------------------
cons
[selI_hsap]SPP0 VYEAMVPLFSPCLLF--ILSTAWILWSPSDILELHPRVFYFMVGT
[selI_dmel]SPP0 MWEMLRPFFAFVWLF--VITVVWSFFSRNDVINKEPRILWILYGT
[choleth_hsap]g GTSVLSPFLHIGS--VITLAAMIYKKSAVQLFEKHPCLYILTFGF
[choleth_dmel]g FWEAVRPMWPFITYF--VILLAWPYVSPNDIMEKDPRAIFMLSGT
[yeast_choleth] QDSAIKGLLPFFAYY--A-SIALLVWMQPSFITL---SFILSVGF
[choleth_edis]g FKDSLKRLFPFMQFF--ILTGILFLLTDELFIRNNFHSIVAITIL
[choleth2_edis] KTEALKHGLPYFCFT--LMSFINILLVPNTFIISHYHLFIGTLIF
[chol1_hsap]gi| GTSVLSPGLHIGL--IIILAIMIYKKSATDVFEKHPCLYILMFGC
[chol_dmel_poss GTSVLSPSIPLTL--VVLPALMIAQKSPQNLFTEHASVYIMAFGM
[chol_Edis]gi|1 LSSAIFCMTQYFIFLILTLSLILLLHINSDYSNKVFWLNCYIIIL
[put_selI_ehis] ---------------------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis ---------------------------------------------
cons
[selI_hsap]SPP0 AFANSTCQLIVCQMSSTRCPTLNWLL-VPLFLV------VLVVNL
[selI_dmel]SPP0 IFSNIACRLIVAQMSDTRCDAFNVLM-WPLAATVGVCCFPYYQQV
[choleth_hsap]g VSAKITNKLVVAHMTKSEMHLHDTAFIGP-ALLF------L-DQY
[choleth_dmel]g IFSNVSCRLIVSQMSVTRCEAWHWQT--PMFI------LSFLTSL
[yeast_choleth] TGAFTVGRIIVCHLTKQSFPMFNAPMLIPLCQIV-L--YKICLSL
[choleth_edis]g LNAFITQRIILNRICKEEVNLYYYINIIY-AIYV------F-LMV
[choleth2_edis] INAYLTQRLIVHRICKESVTYYHTLLILY-TLYT------LN-GI
[chol1_hsap]gi| VFAKVSQKLVVAHMTKSELYLQDTVFLGP-GLLF------L-DQY
[chol_dmel_poss VAAKVTNKLVIAHMTKAEMEYLDWSLLGP-SLLF------L-NQY
[chol_Edis]gi|1 INAYLTQRLVVKRICKEPISMMDNIFYGY-GFYI------IILSI
[put_selI_ehis] ---------------------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis ---------------------------------------------
cons
[selI_hsap]SPP0 ---GVASY-VESILL-YTLTTAFTLAHIHYGVRVVKQLS------
[selI_dmel]SPP0 FDSDLTSD-TERWIL-YGLTIFSTLAHWHYGYGVVSEMC------
[choleth_hsap]g FNSFID----EYIV-LWIALVFSFFDLIRYCVSVCNQIA------
[choleth_dmel]g WIP----L-LERPLL-YLLLIVTTLSHWQYGASVVNQMC------
[yeast_choleth] W--GIESN-KIVFALSWLGFGLSLGVHIMFMNDIIHEFT------
[choleth_edis]g C-N-IQKDLIT-----FIMLLISIGQESLFAISVSLTMSKEIGIN
[choleth2_edis] LYS-LQIPALNFYFSLRLLFVFALVFEISFIYTIITSFS------
[chol1_hsap]gi| FNNFID----EYVV-LWMAMVISSFDMVIYFSALCLQIS------
[chol_dmel_poss FNCIVP----EIWL-LWFTLIWGTQDLLRYCAQVCLEIC------
[chol_Edis]gi|1 AFI-LHNECLAF-LITVGGLIFAFFMESLLIGDICYAFS------
[put_selI_ehis] ---------------------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis ---------------------------------------------
cons
[selI_hsap]SPP0 ---------------------------------------------
[selI_dmel]SPP0 ---------------------------------------------
[choleth_hsap]g ---------------------------------------------
[choleth_dmel]g ---------------------------------------------
[yeast_choleth] ---------------------------------------------
[choleth_edis]g KCLIVILPYFYNYSVNIFNYSNYIHLINHSNLLYSIFFHTCGVIS
[choleth2_edis] ---------------------------------------------
[chol1_hsap]gi| ---------------------------------------------
[chol_dmel_poss ---------------------------------------------
[chol_Edis]gi|1 ---------------------------------------------
[put_selI_ehis] ---------------------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis ---------------------------------------------
cons
[selI_hsap]SPP0 -SHFQIYPFSLRKPNSDXL--------------------------
[selI_dmel]SPP0 -DHFHIRCFKVRKSSSQ-SGS----------------DITQLLQN
[choleth_hsap]g -SHLHIHVFRIKV--------------------------------
[choleth_dmel]g -EHFNRVCFTVHKRVPQ-EELPKK--KTL-----LAEEISQADKP
[yeast_choleth] -EYLDVYALSIKR--------------------------------
[choleth_edis]g NSGFDIHIFNLGQADSQ------------------------LIVF
[choleth2_edis] -KYLHINVLFIT---------------------------------
[chol1_hsap]gi| -RHLHLNIFKTACHQ-----APE-----------------QVQVL
[chol_dmel_poss -QHLRIDLFRIPYTPKG--ATPHPATASVSSQSNFGSSADKNGGS
[chol_Edis]gi|1 -RHLGIHVLTISP--------------------------------
[put_selI_ehis] ---------------------------------------------
[put1_selI_edis ---------------------------------------------
[put2_selI.edis ---------------------------------------------
cons
[selI_hsap]SPP0 -GMEEKNIGL
[selI_dmel]SPP0 NNKIKPLKSH
[choleth_hsap]g --STAHSNHH
[choleth_dmel]g QAEEPLKKDI
[yeast_choleth] ------SKLT
[choleth_edis]g PSGYSILMMW
[choleth2_edis] ------PKHD
[chol1_hsap]gi| SSKSHQNNMD
[chol_dmel_poss AHRKSKSKPH
[chol_Edis]gi|1 ----IEENDV
[put_selI_ehis] ---------I
[put1_selI_edis ---------L
[put2_selI.edis ---------V
cons