T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=42
*
 BAD AVG GOOD
*
SelO_SECIS_Homo   :  42
SelO_SECIS_homo   :  42
cons              :  42

SelO_SECIS_Homo   -CCCCATGTGCTGCTGAGTGGCCAAGATGATGCCAGGCTGCCCTA
SelO_SECIS_homo   GGAUCAGGU-UUGCGAAGAAGACGGCCUAAUGAAGAGUGGAUCGA

cons                  ** *    **  **  * *      * *    *  *  * *


SelO_SECIS_Homo   TACACTGGGGGATTCTGCCCTGGCCCA-T-GCACACCCGTCTTTC
SelO_SECIS_homo   AAAGCCA--UCACCCGGACC-GACCCAACUCUGAACCCGCCCCUU

cons               *  *      *  * * ** * ****       ***** *    


SelO_SECIS_Homo   CATGATGGCAGAGAC
SelO_SECIS_homo   CUUCCUUUCC--UCC

cons              *       *     *