Query= SPP00000033_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Homo sapiens # Complete (448 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 226 4e-59 gi|154333356|ref|NC_009302.1| Leishmania braziliensis MHOM/BR/75... 29 6.8 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 226 bits (575), Expect = 4e-59, Method: Composition-based stats. Identities = 154/410 (37%), Positives = 203/410 (49%), Gaps = 22/410 (5%) Frame = -2 Query: 38 FEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGL-TRPDVRPPLGRGLVGGQEEA 96 F+P +LGL ++LT ++ +KG CK+PQ LL LL + T P GQE+ Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTP------------GQED- 2090957 Query: 97 SQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHG-----GLSLVQTTDFFYPLVEDPYMMG 151 +GMD ++PL H L LV TTDFF+P V DP++ G Sbjct: 2090956 --------------------VGMDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQG 2090837 Query: 152 RIACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXXXXXXXX 211 +I ANVLSDLY+MGI+ CD R T ++KGF + Sbjct: 2090836 QIGAANVLSDLYSMGISHCDTMLMLLAASTDMDEHERMVTTREIMKGFAERAQLAATTVT 2090657 Query: 212 XXXXXXNPWIIIGGVATVVCQPNEFIMPDSAV-VGDVLVLTKPLGTQVAVNAHQWLDNPE 270 NPW +IGGVA V E + P + GDVLVLTKPLG QVAVN QWL P Sbjct: 2090656 GGQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLRAGDVLVLTKPLGCQVAVNLKQWLLRPT 2090477 Query: 271 RWNKVKMV--VSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQN 328 + + ++ E+E Y A +M LNR A LM +AH ATD+TGFGILGH+ N Sbjct: 2090476 PLYEEAIAEHITPGEIEELYNMATDSMRRLNREGARLMGKHSAHGATDVTGFGILGHANN 2090297 Query: 329 LAKQQR-----NEVSFVIHNLPIIAKMAAVSK-ASGRFGLLQGTSAETSGGLLICLPREQ 382 Q + V+ LP+ A SK + ++ LL+G SAETSGGLL+ P Sbjct: 2090296 FGAAQNVGDAPRSLCLVLERLPMFKTAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTT 2090117 Query: 383 AAR-FCSEIKSSKYGEGHQAWIVGIVEKGNRT------ARIIDKPRVIEV 425 AA FC+E+ + G +WIVG VE+ AR+ D +IEV Sbjct: 2090116 AAEAFCAELTEAD--GGCPSWIVGRVEERATNAADGVYARLTDGYEIIEV 2089973 >gi|154333356|ref|NC_009302.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 10 Length = 612479 Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats. Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 77 TRPDVRPPLGRGLVGGQEEASQEA-GLPAGAGPS 109 TRP RP GRG G+EE + A P AGPS Sbjct: 186280 TRPTRRPIWGRGRESGKEERERRAEAPPLTAGPS 186179 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Drosophila melanogaster # Complete (370 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 243 2e-64 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 243 bits (619), Expect = 2e-64, Method: Composition-based stats. Identities = 148/384 (38%), Positives = 212/384 (55%), Gaps = 17/384 (4%) Frame = -2 Query: 2 FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61 F P GL +FQLT +T G SCK+PQ L L+ D GMDC+++ Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTPGQED-----VGMDCSIV 2090933 Query: 62 PL----KRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117 PL + + L+ T DFF+P V+DP L G+I ANVLSD+Y++G++ DT+ M+++ Sbjct: 2090932 PLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGISHCDTMLMLLAA 2090753 Query: 118 STSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEI 177 ST E ER V +MKGF + T + Q +NPW +IGG+A +V E+ Sbjct: 2090752 STDMDEHERMVTTREIMKGFAERAQLAA---TTVTGGQTVMNPWPLIGGVAIAVVSEVEM 2090582 Query: 178 ILPSN-AQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLSE-CSDADIKETFEIAVK 235 + PS + GDVLVLTKPLG Q+A++ W L T Y++ ++E + +I+E + +A Sbjct: 2090581 VRPSGLLRAGDVLVLTKPLGCQVAVNLKQWLLRPTPLYEEAIAEHITPGEIEELYNMATD 2090402 Query: 236 SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQK-----EKVLFQINKLPIIK 290 SM LN+ A LM K+ AH ATD+TGFG+LGHANN Q + + +LP+ K Sbjct: 2090401 SMRRLNREGARLMGKHSAHGATDVTGFGILGHANNFGAAQNVGDAPRSLCLVLERLPMFK 2090222 Query: 291 NVLKFSTLVGQSTKFRSGRSVETSGGLLICLPA-DAADKFCRDFEEATNGEQKSFQIGHV 349 + S + + G S ETSGGLL+ P+ AA+ FC + EA +G S+ +G V Sbjct: 2090221 TAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTEA-DGGCPSWIVGRV 2090045 Query: 350 T--AANESDAV---LCEDVEFIEV 368 A N +D V L + E IEV Sbjct: 2090044 EERATNAADGVYARLTDGYEIIEV 2089973 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000108_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Mus musculus # Complete (452 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 227 2e-59 gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75... 33 0.58 gi|154335056|ref|NC_009308.1| Leishmania braziliensis MHOM/BR/75... 30 2.8 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 227 bits (578), Expect = 2e-59, Method: Composition-based stats. Identities = 151/409 (36%), Positives = 197/409 (48%), Gaps = 21/409 (5%) Frame = -2 Query: 41 FEPQTLGFSPSWRLTSFSGMKGUGCKVPQETLLKLLEGLTRPALQPPLTSXXXXXXXXXX 100 F+P +LG ++LT ++ +KG CK+PQ LL LL+ + Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEV--------------------- 2090981 Query: 101 XXXXXSTRPGPGSAFPSLSIGMDSCVIPLRHG-----GLSLVQTTDFFYPLVEDPYMMGR 155 ST PG +GMD ++PL H L LV TTDFF+P V DP++ G+ Sbjct: 2090980 -----STTPG------QEDVGMDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQ 2090834 Query: 156 IACANVLSDLYAMGITECDNXXXXXXXXXXXXEKEREKVTPLMIKGFRDXXXXXXXXXXX 215 I ANVLSDLY+MGI+ CD E ER T ++KGF + Sbjct: 2090833 IGAANVLSDLYSMGISHCDTMLMLLAASTDMDEHERMVTTREIMKGFAERAQLAATTVTG 2090654 Query: 216 XXXXXNPWIIIGGVATVVCQQNEFIMPDSAV-VGDVLVLTKPLGTQVAANAHQWLDNPEK 274 NPW +IGGVA V + E + P + GDVLVLTKPLG QVA N QWL P Sbjct: 2090653 GQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLRAGDVLVLTKPLGCQVAVNLKQWLLRPTP 2090474 Query: 275 W--NKIKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNL 332 I ++ E+E Y A +M LNR A LM +AH ATD+TGFGILGH+ N Sbjct: 2090473 LYEEAIAEHITPGEIEELYNMATDSMRRLNREGARLMGKHSAHGATDVTGFGILGHANNF 2090294 Query: 333 AKQQK-----NEVSFVIHNLPXXXXXXXXXXXXG-RFGLLQGTSAETSGGLLICLPREQA 386 Q + V+ LP ++ LL+G SAETSGGLL+ P A Sbjct: 2090293 GAAQNVGDAPRSLCLVLERLPMFKTAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTA 2090114 Query: 387 AR-FCSEIKSSKYGEGHQAWIVGIVEKGNRT------ARIIDKPRVIEV 428 A FC+E+ + G +WIVG VE+ AR+ D +IEV Sbjct: 2090113 AEAFCAELTEAD--GGCPSWIVGRVEERATNAADGVYARLTDGYEIIEV 2089973 >gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 22 Length = 657844 Score = 32.7 bits (73), Expect = 0.58, Method: Composition-based stats. Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +3 Query: 107 TRPGPGSAFPSLSIGMDSCVIPLRH 131 T G G A PSL++G S VIPLRH Sbjct: 206133 TEHGVGLAAPSLAVGKHSAVIPLRH 206207 >gi|154335056|ref|NC_009308.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 16 Length = 696353 Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -1 Query: 26 PAGWSAGRSFSNYRPFEPQTLGFSPSWRLTSFSGMKGUGCKVPQETLLKLLEGLTRPALQ 85 PA + +FS+YRP QTL PS T+ + + C P T T ++ Sbjct: 124073 PATLAGSLAFSSYRPLLLQTLQGRPS---TTPAARRSCCCSTPCAT-----SSTTSTQVR 123918 Query: 86 PPLT 89 PPLT Sbjct: 123917 PPLT 123906 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= LmjF36_01_20050601_V5.2:subseq(2091000,6000).pep # sps2 # L.major (352 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 576 e-165 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 576 bits (1484), Expect = e-165, Method: Composition-based stats. Identities = 286/352 (81%), Positives = 297/352 (84%) Frame = -2 Query: 1 FDPVSLGLPAEFQLTDYTRLKGCSCXXXXXXXXXXXXXXSATPGQKDVGMDCSIVPLHHT 60 FDP+SLGLPAEFQLTDYTRLKGCSC S TPGQ+DVGMDCSIVPLHHT Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTPGQEDVGMDCSIVPLHHT 2090918 Query: 61 NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAASTEMD 120 NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGI CDTMLMLLAAST+MD Sbjct: 2090917 NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGISHCDTMLMLLAASTDMD 2090738 Query: 121 EHERLITTREIMKGFAERARLATTTVTGGQTVMNPWPLIGGXXXXXXXXXXXXRPTGLLC 180 EHER++TTREIMKGFAERA+LA TTVTGGQTVMNPWPLIGG RP+GLL Sbjct: 2090737 EHERMVTTREIMKGFAERAQLAATTVTGGQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLR 2090558 Query: 181 AGDILVLTKPLGCQVAVNLKQWLLRPSPLYEEAIAGHISPEEIEELYNMATDSMRRLNRE 240 AGD+LVLTKPLGCQVAVNLKQWLLRP+PLYEEAIA HI+P EIEELYNMATDSMRRLNRE Sbjct: 2090557 AGDVLVLTKPLGCQVAVNLKQWLLRPTPLYEEAIAEHITPGEIEELYNMATDSMRRLNRE 2090378 Query: 241 GARLMRKHGAHGATDVTGFGILGHANNFGAAQAVGDAPRSLCLVLERLPMFKTAVAASKQ 300 GARLM KH AHGATDVTGFGILGHANNFGAAQ VGDAPRSLCLVLERLPMFKTAVAASK+ Sbjct: 2090377 GARLMGKHSAHGATDVTGFGILGHANNFGAAQNVGDAPRSLCLVLERLPMFKTAVAASKR 2090198 Query: 301 MNDKYRLLEGYSAETSGGLLVXXXXXXXXXXXXXXXXXVDGGCPSWIVGHVE 352 MNDKYRLLEGYSAETSGGLLV DGGCPSWIVG VE Sbjct: 2090197 MNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTEADGGCPSWIVGRVE 2090042 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|83779010|ref|NP_076982.3| SECIS binding protein 2 [Homo sapiens] (854 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done ***** No hits found ******Query= SPP00000033_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Homo sapiens # Complete (448 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 226 4e-59 gi|154333356|ref|NC_009302.1| Leishmania braziliensis MHOM/BR/75... 29 6.8 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 226 bits (575), Expect = 4e-59, Method: Composition-based stats. Identities = 154/410 (37%), Positives = 203/410 (49%), Gaps = 22/410 (5%) Frame = -2 Query: 38 FEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGL-TRPDVRPPLGRGLVGGQEEA 96 F+P +LGL ++LT ++ +KG CK+PQ LL LL + T P GQE+ Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTP------------GQED- 2090957 Query: 97 SQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHG-----GLSLVQTTDFFYPLVEDPYMMG 151 +GMD ++PL H L LV TTDFF+P V DP++ G Sbjct: 2090956 --------------------VGMDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQG 2090837 Query: 152 RIACANVLSDLYAMGITECDNXXXXXXXXXXXXXXXREKVTPLMVKGFRDXXXXXXXXXX 211 +I ANVLSDLY+MGI+ CD R T ++KGF + Sbjct: 2090836 QIGAANVLSDLYSMGISHCDTMLMLLAASTDMDEHERMVTTREIMKGFAERAQLAATTVT 2090657 Query: 212 XXXXXXNPWIIIGGVATVVCQPNEFIMPDSAV-VGDVLVLTKPLGTQVAVNAHQWLDNPE 270 NPW +IGGVA V E + P + GDVLVLTKPLG QVAVN QWL P Sbjct: 2090656 GGQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLRAGDVLVLTKPLGCQVAVNLKQWLLRPT 2090477 Query: 271 RWNKVKMV--VSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQN 328 + + ++ E+E Y A +M LNR A LM +AH ATD+TGFGILGH+ N Sbjct: 2090476 PLYEEAIAEHITPGEIEELYNMATDSMRRLNREGARLMGKHSAHGATDVTGFGILGHANN 2090297 Query: 329 LAKQQR-----NEVSFVIHNLPIIAKMAAVSK-ASGRFGLLQGTSAETSGGLLICLPREQ 382 Q + V+ LP+ A SK + ++ LL+G SAETSGGLL+ P Sbjct: 2090296 FGAAQNVGDAPRSLCLVLERLPMFKTAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTT 2090117 Query: 383 AAR-FCSEIKSSKYGEGHQAWIVGIVEKGNRT------ARIIDKPRVIEV 425 AA FC+E+ + G +WIVG VE+ AR+ D +IEV Sbjct: 2090116 AAEAFCAELTEAD--GGCPSWIVGRVEERATNAADGVYARLTDGYEIIEV 2089973 >gi|154333356|ref|NC_009302.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 10 Length = 612479 Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats. Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -2 Query: 77 TRPDVRPPLGRGLVGGQEEASQEA-GLPAGAGPS 109 TRP RP GRG G+EE + A P AGPS Sbjct: 186280 TRPTRRPIWGRGRESGKEERERRAEAPPLTAGPS 186179 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000048_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Drosophila melanogaster # Complete (370 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 243 2e-64 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 243 bits (619), Expect = 2e-64, Method: Composition-based stats. Identities = 148/384 (38%), Positives = 212/384 (55%), Gaps = 17/384 (4%) Frame = -2 Query: 2 FQPEKHGLEPDFQLTKFTTHTGUSCKIPQKVLEKYLRGTEIENKNNDGYLIGSGMDCAVI 61 F P GL +FQLT +T G SCK+PQ L L+ D GMDC+++ Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTPGQED-----VGMDCSIV 2090933 Query: 62 PL----KRHKDYLLIQTVDFFYPMVNDPELLGRIALANVLSDVYAVGVTQFDTVEMIVST 117 PL + + L+ T DFF+P V+DP L G+I ANVLSD+Y++G++ DT+ M+++ Sbjct: 2090932 PLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGISHCDTMLMLLAA 2090753 Query: 118 STSFSEKERDVVIGLVMKGFQNSLKANGYRNTPLIIRQLKINPWCIIGGIATSVCRSEEI 177 ST E ER V +MKGF + T + Q +NPW +IGG+A +V E+ Sbjct: 2090752 STDMDEHERMVTTREIMKGFAERAQLAA---TTVTGGQTVMNPWPLIGGVAIAVVSEVEM 2090582 Query: 178 ILPSN-AQPGDVLVLTKPLGGQMAMDAHLWQLNQTEKYKKLLSE-CSDADIKETFEIAVK 235 + PS + GDVLVLTKPLG Q+A++ W L T Y++ ++E + +I+E + +A Sbjct: 2090581 VRPSGLLRAGDVLVLTKPLGCQVAVNLKQWLLRPTPLYEEAIAEHITPGEIEELYNMATD 2090402 Query: 236 SMTYLNKNAALLMHKYQAHCATDITGFGLLGHANNLAQFQK-----EKVLFQINKLPIIK 290 SM LN+ A LM K+ AH ATD+TGFG+LGHANN Q + + +LP+ K Sbjct: 2090401 SMRRLNREGARLMGKHSAHGATDVTGFGILGHANNFGAAQNVGDAPRSLCLVLERLPMFK 2090222 Query: 291 NVLKFSTLVGQSTKFRSGRSVETSGGLLICLPA-DAADKFCRDFEEATNGEQKSFQIGHV 349 + S + + G S ETSGGLL+ P+ AA+ FC + EA +G S+ +G V Sbjct: 2090221 TAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTEA-DGGCPSWIVGRV 2090045 Query: 350 T--AANESDAV---LCEDVEFIEV 368 A N +D V L + E IEV Sbjct: 2090044 EERATNAADGVYARLTDGYEIIEV 2089973 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000108_1.0 # Protein # Selenophosphate synthetase 2 (SPS2) # Mus musculus # Complete (452 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 227 2e-59 gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75... 33 0.58 gi|154335056|ref|NC_009308.1| Leishmania braziliensis MHOM/BR/75... 30 2.8 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 227 bits (578), Expect = 2e-59, Method: Composition-based stats. Identities = 151/409 (36%), Positives = 197/409 (48%), Gaps = 21/409 (5%) Frame = -2 Query: 41 FEPQTLGFSPSWRLTSFSGMKGUGCKVPQETLLKLLEGLTRPALQPPLTSXXXXXXXXXX 100 F+P +LG ++LT ++ +KG CK+PQ LL LL+ + Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEV--------------------- 2090981 Query: 101 XXXXXSTRPGPGSAFPSLSIGMDSCVIPLRHG-----GLSLVQTTDFFYPLVEDPYMMGR 155 ST PG +GMD ++PL H L LV TTDFF+P V DP++ G+ Sbjct: 2090980 -----STTPG------QEDVGMDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQ 2090834 Query: 156 IACANVLSDLYAMGITECDNXXXXXXXXXXXXEKEREKVTPLMIKGFRDXXXXXXXXXXX 215 I ANVLSDLY+MGI+ CD E ER T ++KGF + Sbjct: 2090833 IGAANVLSDLYSMGISHCDTMLMLLAASTDMDEHERMVTTREIMKGFAERAQLAATTVTG 2090654 Query: 216 XXXXXNPWIIIGGVATVVCQQNEFIMPDSAV-VGDVLVLTKPLGTQVAANAHQWLDNPEK 274 NPW +IGGVA V + E + P + GDVLVLTKPLG QVA N QWL P Sbjct: 2090653 GQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLRAGDVLVLTKPLGCQVAVNLKQWLLRPTP 2090474 Query: 275 W--NKIKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNL 332 I ++ E+E Y A +M LNR A LM +AH ATD+TGFGILGH+ N Sbjct: 2090473 LYEEAIAEHITPGEIEELYNMATDSMRRLNREGARLMGKHSAHGATDVTGFGILGHANNF 2090294 Query: 333 AKQQK-----NEVSFVIHNLPXXXXXXXXXXXXG-RFGLLQGTSAETSGGLLICLPREQA 386 Q + V+ LP ++ LL+G SAETSGGLL+ P A Sbjct: 2090293 GAAQNVGDAPRSLCLVLERLPMFKTAVAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTA 2090114 Query: 387 AR-FCSEIKSSKYGEGHQAWIVGIVEKGNRT------ARIIDKPRVIEV 428 A FC+E+ + G +WIVG VE+ AR+ D +IEV Sbjct: 2090113 AEAFCAELTEAD--GGCPSWIVGRVEERATNAADGVYARLTDGYEIIEV 2089973 >gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 22 Length = 657844 Score = 32.7 bits (73), Expect = 0.58, Method: Composition-based stats. Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +3 Query: 107 TRPGPGSAFPSLSIGMDSCVIPLRH 131 T G G A PSL++G S VIPLRH Sbjct: 206133 TEHGVGLAAPSLAVGKHSAVIPLRH 206207 >gi|154335056|ref|NC_009308.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 16 Length = 696353 Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats. Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -1 Query: 26 PAGWSAGRSFSNYRPFEPQTLGFSPSWRLTSFSGMKGUGCKVPQETLLKLLEGLTRPALQ 85 PA + +FS+YRP QTL PS T+ + + C P T T ++ Sbjct: 124073 PATLAGSLAFSSYRPLLLQTLQGRPS---TTPAARRSCCCSTPCAT-----SSTTSTQVR 123918 Query: 86 PPLT 89 PPLT Sbjct: 123917 PPLT 123906 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= LmjF36_01_20050601_V5.2:subseq(2091000,6000).pep # sps2 # L.major (352 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 576 e-165 >gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904 chromosome 35 Length = 2686796 Score = 576 bits (1484), Expect = e-165, Method: Composition-based stats. Identities = 286/352 (81%), Positives = 297/352 (84%) Frame = -2 Query: 1 FDPVSLGLPAEFQLTDYTRLKGCSCXXXXXXXXXXXXXXSATPGQKDVGMDCSIVPLHHT 60 FDP+SLGLPAEFQLTDYTRLKGCSC S TPGQ+DVGMDCSIVPLHHT Sbjct: 2091097 FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTPGQEDVGMDCSIVPLHHT 2090918 Query: 61 NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAASTEMD 120 NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGI CDTMLMLLAAST+MD Sbjct: 2090917 NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGISHCDTMLMLLAASTDMD 2090738 Query: 121 EHERLITTREIMKGFAERARLATTTVTGGQTVMNPWPLIGGXXXXXXXXXXXXRPTGLLC 180 EHER++TTREIMKGFAERA+LA TTVTGGQTVMNPWPLIGG RP+GLL Sbjct: 2090737 EHERMVTTREIMKGFAERAQLAATTVTGGQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLR 2090558 Query: 181 AGDILVLTKPLGCQVAVNLKQWLLRPSPLYEEAIAGHISPEEIEELYNMATDSMRRLNRE 240 AGD+LVLTKPLGCQVAVNLKQWLLRP+PLYEEAIA HI+P EIEELYNMATDSMRRLNRE Sbjct: 2090557 AGDVLVLTKPLGCQVAVNLKQWLLRPTPLYEEAIAEHITPGEIEELYNMATDSMRRLNRE 2090378 Query: 241 GARLMRKHGAHGATDVTGFGILGHANNFGAAQAVGDAPRSLCLVLERLPMFKTAVAASKQ 300 GARLM KH AHGATDVTGFGILGHANNFGAAQ VGDAPRSLCLVLERLPMFKTAVAASK+ Sbjct: 2090377 GARLMGKHSAHGATDVTGFGILGHANNFGAAQNVGDAPRSLCLVLERLPMFKTAVAASKR 2090198 Query: 301 MNDKYRLLEGYSAETSGGLLVXXXXXXXXXXXXXXXXXVDGGCPSWIVGHVE 352 MNDKYRLLEGYSAETSGGLLV DGGCPSWIVG VE Sbjct: 2090197 MNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTEADGGCPSWIVGRVE 2090042 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|83779010|ref|NP_076982.3| SECIS binding protein 2 [Homo sapiens] (854 letters) Database: genome.fa 35 sequences; 31,379,198 total letters Searching..................................................done ***** No hits found ******