genewise output
Score 792.30 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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LmjF36_01_20050    1 FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQELSATPGQKDVG 
                     FDP+SLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQE+S TPGQ+DVG 
                     FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTPGQEDVG 
gi|154346825|re 3001 tgcatcgccggtccagtaccagtataccccaccgcccggtaacgcgggg 
                     tactctgtccatatcaacgtaggggatcacattcttaatccccgaaatg 
                     tccctaccttgcgccccacaggcccagggggggcgggacaagtgggcct 


LmjF36_01_20050   50 MDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDL 
                     MDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDL 
                     MDCSIVPLHHTNSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDL 
gi|154346825|re 3148 agtaagccccaaaagggctcgtaagtttcagtgctccgcagggagttgt 
                     taggttctaacagagacttttcccatttcgtcacttagatgccattcat 
                     gccctgtgccgccatgggccctagccccccggtgctgaacgtaccgacg 


LmjF36_01_20050   99 YSMGIPDCDTMLMLLAASTEMDEHERLITTREIMKGFAERARLATTTVT 
                     YSMGI  CDTMLMLLAAST+MDEHER++TTREIMKGFAERA+LA TTVT 
                     YSMGISHCDTMLMLLAASTDMDEHERMVTTREIMKGFAERAQLAATTVT 
gi|154346825|re 3295 taagatctgaacaccggaagaggcgcagaacgaaagtggcgctggaaga 
                     agtgtcagactttttccgcataaaagttccgattagtcagcatcccctc 
                     ccgccacttgggggcgtcccgcgtgcgcgagacggttggggggggggca 


LmjF36_01_20050  148 GGQTVMNPWPLIGGVAMAVVSEAEMVRPTGLLCAGDILVLTKPLGCQVA 
                     GGQTVMNPWPLIGGVA+AVVSE EMVRP+GLL AGD+LVLTKPLGCQVA 
                     GGQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLRAGDVLVLTKPLGCQVA 
gi|154346825|re 3442 ggcagaactccaggggagggtgggagccagctcggggtgcaaccgtcgg 
                     ggacttacgcttggtctcttcatattgcggttgcgattttcactggatc 
                     cggacgcggggccggcagtaagggggaattcgctacaagggaggacgtc 


LmjF36_01_20050  197 VNLKQWLLRPSPLYEEAIAGHISPEEIEELYNMATDSMRRLNREGARLM 
                     VNLKQWLLRP+PLYEEAIA HI+P EIEELYNMATDSMRRLNREGARLM 
                     VNLKQWLLRPTPLYEEAIAEHITPGEIEELYNMATDSMRRLNREGARLM 
gi|154346825|re 3589 gacactccccacctgggaggcaacggaggctaagagaacccacgggcca 
                     tataagttgccctaaactcaatccgataataatccagtggtagagcgtt 
                     gtcggggggccagcgacctgtctccgcgggccgcaccggcgccagtgag 


LmjF36_01_20050  246 RKHGAHGATDVTGFGILGHANNFGAAQAVGDAPRSLCLVLERLPMFKTA 
                      KH AHGATDVTGFGILGHANNFGAAQ VGDAPRSLCLVLERLPMFKTA 
                     GKHSAHGATDVTGFGILGHANNFGAAQNVGDAPRSLCLVLERLPMFKTA 
gi|154346825|re 3736 gacagcggaggagtgacgcgaatgggcaggggcctctcgcgaccataag 
                     gaagcagccatcgtgttgacaatgccaatgaccgctgtttagtcttacc 
                     ggccgcgcttgcctctggcacctcatgccctggcacccagaaaggcgtc 


LmjF36_01_20050  295 VAASKQMNDKYRLLEGYSAETSGGLLVAFPSTTAAAAFCAELTAVDGGC 
                     VAASK+MNDKYRLLEGYSAETSGGLLVAFPSTTAA AFCAELT  DGGC 
                     VAASKRMNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTEADGGC 
gi|154346825|re 3883 gggtacaagatcccggttggaaggccggtcaaaggggttggcagggggt 
                     tcccagtaaaagttagaccacgggtttctcgccccactgcatcacaggg 
                     gtcggggtcgctccagtggggccgggggcgcctggggccgacggctcgt 


LmjF36_01_20050  344 PSWIVGHVE                                         
                     PSWIVG VE                                         
                     PSWIVGRVE                                         
gi|154346825|re 4030 cttaggcgg                                         
                     ccgttggta                                         
                     gggtcgtaa                                         


//
>gi|154346825|ref|NC_009327.1|:subseq(2087042,7055).pep
FDPISLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQEVSTTPGQEDVGMDCSIVPLHHT
NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGISHCDTMLMLLAASTDMD
EHERMVTTREIMKGFAERAQLAATTVTGGQTVMNPWPLIGGVAIAVVSEVEMVRPSGLLR
AGDVLVLTKPLGCQVAVNLKQWLLRPTPLYEEAIAEHITPGEIEELYNMATDSMRRLNRE
GARLMGKHSAHGATDVTGFGILGHANNFGAAQNVGDAPRSLCLVLERLPMFKTAVAASKR
MNDKYRLLEGYSAETSGGLLVAFPSTTAAEAFCAELTEADGGCPSWIVGRVE
//
>gi|154346825|ref|NC_009327.1|:subseq(2087042,7055).[3001:4056].sp
TTTGACCCCATCTCTCTAGGCCTCCCTGCTGAGTTCCAGCTCACCGACTACACACGCCTA
AAGGGGTGCAGCTGCAAACTGCCGCAGCCGAAGCTGCTGGCCCTGCTGCAGGAAGTCTCA
ACAACGCCTGGGCAGGAGGACGTCGGTATGGACTGCAGCATTGTGCCTCTGCACCACACG
AACAGCAAAGGTGAGGCGCTGTTCCTCGTCTCTACAACGGACTTCTTCTTCCCCAGCGTG
TCGGATCCGTTCCTTCAGGGACAAATCGGGGCTGCAAACGTCTTGTCAGACTTGTACAGC
ATGGGCATCTCACACTGTGATACGATGCTGATGCTGCTCGCGGCTAGCACCGACATGGAC
GAGCATGAGCGCATGGTCACGACACGGGAAATCATGAAGGGTTTTGCGGAGCGGGCGCAG
TTGGCGGCGACGACGGTCACAGGCGGGCAGACAGTCATGAACCCGTGGCCGCTGATCGGC
GGGGTGGCCATAGCGGTTGTATCAGAGGTGGAGATGGTGCGACCAAGTGGTCTCTTGCGC
GCTGGAGACGTATTAGTGCTGACGAAACCGCTGGGATGCCAGGTTGCCGTGAATCTCAAG
CAGTGGCTGCTGCGGCCCACCCCACTGTACGAGGAAGCCATCGCTGAGCATATCACTCCC
GGCGAGATCGAGGAGCTGTACAACATGGCCACAGACAGCATGCGGCGCCTGAACCGCGAA
GGGGCTCGGCTAATGGGGAAGCACAGCGCGCACGGGGCCACTGATGTGACCGGCTTTGGC
ATTCTGGGGCACGCAAACAACTTTGGCGCAGCTCAGAACGTCGGCGATGCGCCGCGCTCA
CTCTGCCTCGTACTGGAAAGACTACCGATGTTCAAGACTGCCGTGGCTGCCTCGAAGCGG
ATGAATGACAAGTACCGTCTCCTCGAAGGGTATTCGGCGGAGACGAGCGGCGGGCTGCTG
GTGGCGTTCCCGAGCACCACTGCGGCGGAGGCGTTCTGCGCGGAACTCACGGAGGCCGAT
GGCGGGTGTCCGTCGTGGATTGTCGGGCGTGTAGAA
//
gi|154346825|ref|NC_009327.1|:subseq(2087042,7055)	GeneWise	match	3001	4056	792.30	+	.	gi|154346825|ref|NC_009327.1|:subseq(2087042,7055)-genewise-prediction-1
gi|154346825|ref|NC_009327.1|:subseq(2087042,7055)	GeneWise	cds	3001	4056	0.00	+	0	gi|154346825|ref|NC_009327.1|:subseq(2087042,7055)-genewise-prediction-1
//