genewise output
Score 128.06 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000007_1.0   40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQXGKTEVNYTQLVDLHA 
                     S+++F  KD D    NL +++G   ++ NVAS+ G T+  Y     L+  
                     SIYDFQVKDSDHQPYNLSQHKGHPLLIYNVASKCGYTKSGYETATTLYE 
gi|154339612|re 3001 tatgtcgagagccctactccagccccataggaatgtaaagtgagaactg 
                     ctaatataagaaacaatcaaagactttaatcgaggacaggaacccctaa 
                     cccccgggccccggcctcgcgccgtccccgccgccccgcccgacgggca 


SPP00000007_1.0   89 RYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAG-YNVKFDMFSKICVN 
                     +Y   G  +LAFPCNQF  QEPG+  E+K FA   +   F ++ K+ VN 
                     KYKGRGFTVLAFPCNQFAHQEPGTEAEVKTFACTRFKANFPIMEKVNVN 
gi|154339612|re 3148 atagcgtagcgtctactgccgcgaggggaatgtactagatcaagagaga 
                     aaagggtcttctcgaatcaaacgcacatactcgcgtacatcttaatata 
                     gcgtccctaggcgccgctcggtcggggggtcccgccgaccccgaggtgc 


SPP00000007_1.0  137 GDDAHPLWKWMKIQPKGKGILGNA-IKWNFTKFLIDKNGCVVKRYGPME 
                     G+  HPL+ ++K   K  GILG   +KWNFT FL+DK+G  V R+ P   
                     GEKEHPLYCYLKNACK--GILGTTLVKWNFTSFLVDKDGHAVHRFPPGA 
gi|154339612|re 3295 ggagccctttcaagta  gacgaatgatatattcggaggcggcctccgg 
                     gaaaactagataacga  gttgccttagatcctttaaagactagtccgc 
                     cgagcggcccggcccg  ccccggggggccggcgccacctcgcccgccg 


SPP00000007_1.0  185 EPLVIEKDL                                         
                         IEK L                                         
                     TVEEIEKKL                                         
gi|154339612|re 3436 agggagaac                                         
                     ctaataaat                                         
                     gaaacgggg                                         


//
>gi|154339612|ref|NC_009318.1|:subseq(228880,6461).pep
SIYDFQVKDSDHQPYNLSQHKGHPLLIYNVASKCGYTKSGYETATTLYEKYKGRGFTVLA
FPCNQFAHQEPGTEAEVKTFACTRFKANFPIMEKVNVNGEKEHPLYCYLKNACKGILGTT
LVKWNFTSFLVDKDGHAVHRFPPGATVEEIEKKL
//
>gi|154339612|ref|NC_009318.1|:subseq(228880,6461).[3001:3462].sp
TCCATCTACGACTTCCAGGTGAAGGACAGCGACCACCAGCCGTACAACCTTTCCCAGCAC
AAGGGCCACCCGCTTCTCATCTACAACGTGGCCAGCAAGTGCGGCTACACCAAGAGCGGC
TACGAGACAGCCACGACGCTGTACGAAAAGTACAAGGGTCGCGGCTTCACTGTACTGGCG
TTCCCGTGCAACCAGTTCGCTCACCAGGAGCCTGGCACGGAGGCGGAGGTGAAGACTTTC
GCCTGCACGCGCTTCAAGGCAAACTTCCCCATCATGGAAAAGGTGAATGTGAACGGCGAG
AAAGAGCACCCGCTGTACTGCTACCTGAAGAACGCCTGCAAGGGCATCCTCGGCACGACG
TTGGTGAAGTGGAACTTCACGTCGTTCCTGGTCGACAAAGACGGCCATGCCGTGCACCGC
TTCCCGCCCGGCGCGACGGTAGAAGAAATCGAGAAGAAGCTG
//
gi|154339612|ref|NC_009318.1|:subseq(228880,6461)	GeneWise	match	3001	3462	129.06	+	.	gi|154339612|ref|NC_009318.1|:subseq(228880,6461)-genewise-prediction-1
gi|154339612|ref|NC_009318.1|:subseq(228880,6461)	GeneWise	cds	3001	3462	0.00	+	0	gi|154339612|ref|NC_009318.1|:subseq(228880,6461)-genewise-prediction-1
//