Query= gi|54607086|ref|NP_068756.2| eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
(596 letters)
Database: genome.fa
35 sequences; 31,379,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154336958|ref|NC_009312.1| Leishmania braziliensis MHOM/BR/75... 275 8e-74
gi|154335720|ref|NC_009310.1| Leishmania braziliensis MHOM/BR/75... 91 2e-18
gi|154335377|ref|NC_009309.1| Leishmania braziliensis MHOM/BR/75... 81 3e-15
gi|154333023|ref|NC_009301.1| Leishmania braziliensis MHOM/BR/75... 64 4e-10
gi|154338566|ref|NC_009316.1| Leishmania braziliensis MHOM/BR/75... 47 4e-05
gi|154345382|ref|NC_009326.1| Leishmania braziliensis MHOM/BR/75... 47 4e-05
gi|154344351|ref|NC_009325.1| Leishmania braziliensis MHOM/BR/75... 42 0.001
gi|154333587|ref|NC_009303.1| Leishmania braziliensis MHOM/BR/75... 41 0.002
gi|154343652|ref|NC_009324.1| Leishmania braziliensis MHOM/BR/75... 38 0.017
gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 34 0.29
gi|154340790|ref|NC_009320.1| Leishmania braziliensis MHOM/BR/75... 33 0.56
gi|154334717|ref|NC_009307.1| Leishmania braziliensis MHOM/BR/75... 30 6.3
>gi|154336958|ref|NC_009312.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 20
Length = 1668259
Score = 275 bits (703), Expect = 8e-74, Method: Composition-based stats.
Identities = 215/680 (31%), Positives = 310/680 (45%), Gaps = 98/680 (14%)
Frame = +1
Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXX 72
LGH+DSGK FDK PQS+ RGITLDLGFS V S
Sbjct: 1025989 LGHVDSGKTALAKALSRTASTAAFDKSPQSQSRGITLDLGFSACEV-------SVEDGNE 1026147
Query: 73 XXXXXXXXXXXXXXQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLV 132
Q TLVDCPGHASLIRT++GGAQIID M+LVID TKGMQ Q+AECLV
Sbjct: 1026148 DACEVLRSAELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQAQTAECLV 1026327
Query: 133 IGQIACQKLVVVLNKIDLL----PEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXX 188
+G++ + LVVVLNK+D + PE + A + + +++Q+T T++ I+ V
Sbjct: 1026328 LGEVMAKPLVVVLNKVDAVQGATPE-AKAATLAALKRRLQQTFRRTRWPTVVIVEVAAAP 1026504
Query: 189 XXXXXXX---XXXXXXIPELIEL--LTSQISIPTRDPSGP--FLMSVDHCFSIKGQGTVM 241
+P+++ + L + + R+ P F M VDHCF+++GQGTV
Sbjct: 1026505 REVMGRIGPPVNTEAVLPQVLRVVDLVALKAAKEREGERPERFYMLVDHCFAVRGQGTVF 1026684
Query: 242 TGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG 301
TGT+++G + +GD+V +P L++ +KVK +Q+FH P+ A GDR+G+CV QFDP +ERG
Sbjct: 1026685 TGTVVAGMVQVGDTVLVPELQMTRKVKGLQVFHKPVGLARSGDRVGLCVAQFDPTRMERG 1026864
Query: 302 LVCAPES----LHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFS-PAPD 356
++C+ S L + V ++ Y P T KFHI++GH TVMG + +FS PA
Sbjct: 1026865 VLCSAASSGRTLANSSQLIAKVHRVRYHPLPCDTHTKFHISIGHATVMGTMRYFSRPART 1027044
Query: 357 --NFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKAGQATEGHCPRQQ--WA 412
N + D F+ E + E+ + + T GQ P +Q +A
Sbjct: 1027045 NANLNVSGAADRFDPFIESTWVEELGDEVVLSYNTSTSSTASAPGQPLLP-APAEQDYYA 1027221
Query: 413 LVEFEKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGILLHGL-EDRNYADSFLP------ 465
++ E+PV +I RLD + N CR+A G + H ED + P
Sbjct: 1027222 VLLLERPVLAAPGVFMIAMRLDVE-RENFCRIALAGTVCHVFSEDSPAVTAATPTLGDSE 1027398
Query: 466 ------------RLKVYKLKHKHGLVERAMDDYSVIGRSLFKKET--------------- 498
RL V + +++ V R +D S I + +T
Sbjct: 1027399 HSSNHTQVPAWRRLPVVRYRYRTLRVNRVLDSRSCIATGVVSLQTPGDGGGSATPARAFS 1027578
Query: 499 ---------------------NIQLFVGLKVHL------------STGEL----GIIDSA 521
+Q F+ L V T L GIIDS+
Sbjct: 1027579 SAKRNKDSVNGEERQKADLFAEVQKFLRLVVVFEPEDADASVTAPQTSNLGTVKGIIDSS 1027758
Query: 522 FGQSGKFKIHI--PGGLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLS- 578
FG++GK K+ P P + P +R + + + SAE S V L
Sbjct: 1027759 FGKTGKVKLIFDDPVFADPAANTTTAPTSNRRKK-----KSATDPSAEDGSNSGGVFLRP 1027923
Query: 579 ----LTFKRYVFDTHKRMVQ 594
L K+Y F H + Q
Sbjct: 1027924 GRILLILKKYPFALHSGLEQ 1027983
>gi|154335720|ref|NC_009310.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 18
Length = 708397
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 15/347 (4%)
Frame = +1
Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVI-GQIACQKLVVVLNKID 149
+DCPGH ++ +I GA +D ++V+ T G+ Q+ E L+I QI LV +NK+D
Sbjct: 323737 IDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICSQIGLPALVGFINKVD 323916
Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELIELL 209
+ E D + ++++ LE KF V I EL++
Sbjct: 323917 MTDED----TCDLVDMEVREQLEKYKFPAEETPIVRGSALKAVEGDAKYEEKILELVKKC 324084
Query: 210 TSQISIPTRDPSGPFLMSVDHCFSI--KGQGTVMTGTILSGSISLGDSVEIPALKVVK-- 265
I P R+ PFLM+++H + I + ++TG + G + L E+ + K
Sbjct: 324085 DEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGLLKLNTDAELAGFRAKKST 324264
Query: 266 -KVKSMQMFHMPITSAMQGDRLGICV------TQFDPKLLERGLV-CAPESLHTVHAALI 317
KV ++M+H + M GD +G+ + T +ERG+V AP S +
Sbjct: 324265 VKVTGIEMYHKTLNECMPGDSVGVSIVGTGDTTSLSKDNVERGMVMAAPGSTN------- 324423
Query: 318 SVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQE 377
L K K + V + GR FSP ++ + F
Sbjct: 324424 -----------LYNKVKAQVYVLTKDEGGRHTGFSP--------------HYRPQLFFHC 324528
Query: 378 QYLSKDLT--PAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTC 422
++ DL+ A +E +KK G+ E +++ + EFE + C
Sbjct: 324529 ADVTADLSFPEAEKHREELNKKYGRGPEED-KKKEAEMREFESKLVC 324666
>gi|154335377|ref|NC_009309.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 17
Length = 694732
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 12/282 (4%)
Frame = -1
Query: 36 FDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPG 95
DK RERGIT+D+ F P T++D PG
Sbjct: 31117 LDKLKAERERGITIDIALWKFESP-------------------------KSVFTIIDAPG 31013
Query: 96 HASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNK 147
H I+ +I G D +L+ID T+G Q+ E L+ + +++VV NK
Sbjct: 31012 HRDFIKNMITGTSQADAAILMIDSTQGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNK 30833
Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--P 203
+D QA ++++K++ L+ + + IP+ P
Sbjct: 30832 MDDKTVQYSQARYEEISKEVGTYLKRVGYNPEKVRFIPISGWQGDNMIDKSESMAWYKGP 30653
Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263
L++ L + P R P + + + I G GTV G + +G + GD V V
Sbjct: 30652 TLLDAL-DMLEAPVRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANV 30476
Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305
+VKS++M H + A+ GD +G V K + RG VC
Sbjct: 30475 TTEVKSIEMHHEQLAEAVPGDNVGFNVKNVSVKDIRRGNVCG 30350
>gi|154333023|ref|NC_009301.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 9
Length = 556710
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 13/191 (6%)
Frame = -2
Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQ-IACQKLVVVLN 146
+ VDCPGH L+ T++ GA I+D +L+I + Q Q+ E L + I L+V+ N
Sbjct: 427889 SFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLAAAEMIGVSSLIVLQN 427710
Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIP--- 203
KIDL+ + A + + + T + AP++P+ IP
Sbjct: 427709 KIDLVSKAHAAAQYNVIHHYLTT---KTAYAKAPVVPICAQKQINVSFLLDYLVHIPLPR 427539
Query: 204 ------ELIELLTS-QISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSV 256
+ + +L S +S+P P+G M++ QG V+ GT+ +G + +GD +
Sbjct: 427538 RQLRHTQYLNVLRSFDVSLP--GPAGHNAMAL--------QGGVVGGTVAAGVLCVGDEI 427389
Query: 257 E-IPALKVVKK 266
E IP L V+++
Sbjct: 427388 EIIPGLLVLRR 427356
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 88/185 (47%), Gaps = 12/185 (6%)
Frame = -1
Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQI-ACQKLVVVLN 146
+ VDCPGH L+ T++ GA I+D +L+I + Q Q+ E L +I + LVV+ N
Sbjct: 422127 SFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLKAVEIMKLRHLVVLQN 421948
Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPELI 206
KIDL+ E K A D+ ++++ L+N PI+P+ + L+
Sbjct: 421947 KIDLVGEVK---AHDQY-RQVRAYLDNIAL-NVPIVPI----------SAQLKRNVDYLL 421813
Query: 207 ELLTSQISIPTRDPSGPFLMSVDHCFSI---------KGQGTVMTGTILSGSISLGDSVE 257
E L I +P R P M+V F I + +G V GT+ G I +G VE
Sbjct: 421812 EYLL-HIPMPVRQLKAPVRMTVVRSFDINKPGEGDIERLKGGVAGGTVTQGVIKVGQVVE 421636
Query: 258 I-PAL 261
I P L
Sbjct: 421635 IRPGL 421621
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +3
Query: 239 TVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLL 298
T+M G ILSG ++ D+ I A+ V + KS M H T + + L +C T+ D ++
Sbjct: 291429 TIMPG*ILSGVVAGDDAAVISAISVSAQWKSAAM*HHWRTRQAKAE-LSMC-TRSDIRIA 291602
Query: 299 ERGLVCAP 306
R + CAP
Sbjct: 291603 SR-VPCAP 291623
>gi|154338566|ref|NC_009316.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 24
Length = 847824
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = -2
Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKI 148
T +D PGH + T I D+++LVI V +G+++Q+ E + + + ++VVLNK+
Sbjct: 549746 TFIDTPGHRIFVETRFHVHLIADVIVLVISVAEGIESQTHETIKVALNVDKPVIVVLNKL 549567
Query: 149 DLLPEG 154
DLL +
Sbjct: 549566 DLLSDA 549549
>gi|154345382|ref|NC_009326.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 34
Length = 2012684
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 12/248 (4%)
Frame = +1
Query: 36 FDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPG 95
D+ + R RG+T+D G CF +V ++D PG
Sbjct: 1573198 LDQCEEERRRGVTIDSGSFCFET-------------------------EHRRVHILDAPG 1573302
Query: 96 HASLIRTIIGGAQIIDLMMLVI-----DVTKGMQTQSAECL-VIGQIACQKLVVVLNKID 149
H + ++I A D +LV+ + G+Q + L V+ + +VV +NK+D
Sbjct: 1573303 HKDFVVSMISSATQADAAVLVVTAATSEFETGLQHGTKSHLRVLKTLGVGSIVVAVNKMD 1573482
Query: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRG------APIIPVXXXXXXXXXXXXXXXXXIP 203
+ G Q D + +++Q ++ T+ PI + P
Sbjct: 1573483 FV--GYSQERYDYVVRELQLLMKQTRIPEEAIVGFCPISGMTGVNLTQRDAKAMPWYTGP 1573656
Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263
LIE++ + + +R + P +S+ Q T + + SG GD+V+ +V
Sbjct: 1573657 SLIEMI-DKCPLESRLVNSPLRLSLQDV-----QSTTLYAKVESGKFFTGDTVQFVPSEV 1573818
Query: 264 VKKVKSMQ 271
VKS+Q
Sbjct: 1573819 RVVVKSIQ 1573842
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 206 IELLTSQISIPTRDPSGPFLMSVDHC 231
I+ ++S IS+P R PS F+ + HC
Sbjct: 1657121 IQTISSSISVPCRPPSFTFVYATSHC 1657198
>gi|154344351|ref|NC_009325.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 33
Length = 1504429
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149
++D PGH S G+ + D+ +LV+D+ G++ Q+ E + + + +V LNK+D
Sbjct: 1181700 VIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREKRCPFIVALNKVD 1181879
Query: 150 LLPEGKRQAAID-KMTKKMQKTLENTKF 176
L + + +D + + ++QK ++F
Sbjct: 1181880 RLFDWEPHENMDIQQSVELQKAHVRSEF 1181963
>gi|154333587|ref|NC_009303.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 11
Length = 558624
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 24/250 (9%)
Frame = +1
Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVID---------VTKGMQTQSAECLVIGQIA 137
+VT++D PGH + + ++IGGA D+ +LVI KG QT+ +++
Sbjct: 446926 RVTVLDAPGHKAFVPSMIGGATQADVCVLVISSRTGEFETGFEKGGQTRE-HAMLVRTCG 447102
Query: 138 CQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGA--------PIIPVXXXXX 189
++++ V+NK+D + K + D++ K++ L + P+ +
Sbjct: 447103 VKQMICVINKMDEMKWSKER--YDEIVGKLKPFLRQNGYDEERAKNLIFMPVAGLTGENL 447276
Query: 190 XXXXXXXXXXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQ-----GTVMTGT 244
E + + + +P L C + G T + G
Sbjct: 447277 IKHVELSHCDWYKGETMMGVIDSLKLPESKTDDDVL-----CIPLVGAYKDDGKTHIYGK 447441
Query: 245 ILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVC 304
+ SGSI++G+ +++ KV V+ + + GD + + V D + G V
Sbjct: 447442 VESGSIAVGEKIQVLPTKVEALVEGISIESTEFEKCYPGDNVHLHVRGIDESDIHGGYVA 447621
Query: 305 A--PESLHTV 312
P SL V
Sbjct: 447622 TSIPTSLRAV 447651
>gi|154343652|ref|NC_009324.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 32
Length = 1579615
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQ-KLVVVL 145
Q+T++D PGH LI G ++ D ++ +DV + + S L + Q +V+V+
Sbjct: 867754 QITVIDTPGHPDLIGETASGMRLADAVLFCVDVAESLSDHSERLLRHAVVNEQLPIVLVI 867575
Query: 146 NKIDLL 151
K+D L
Sbjct: 867574 TKVDRL 867557
>gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 35
Length = 2686796
Score = 34.3 bits (77), Expect = 0.29, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -1
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
+ L+D PGH + ++ D ++V+D +G+ Q+ L + VV +NK
Sbjct: 86303 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVFINK 86124
Query: 148 ID 149
+D
Sbjct: 86123 VD 86118
Score = 34.3 bits (77), Expect = 0.31, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -2
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
+ L+D PGH + ++ D ++V+D +G+ Q+ L + VV +NK
Sbjct: 82798 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVFINK 82619
Query: 148 ID 149
+D
Sbjct: 82618 VD 82613
>gi|154340790|ref|NC_009320.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 28
Length = 1173595
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -2
Query: 362 PILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEAD---KKAGQATEGHCPRQQWA 412
P+ F+F L +LS+ T A D A ++ QA HCPR+ WA
Sbjct: 716145 PLAALFSFQCIILLGFDFLSRRYTDAYLDKRTATHCADRSEQAASSHCPRRSWA 715984
Score = 32.7 bits (73), Expect = 0.81, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
+ L+D PGH + +++D ++ + D + G+Q QS L + ++ LNK
Sbjct: 796552 INLIDTPGHVDFAVEVERAMRVVDGVVALFDASAGVQAQSYTVLQQSRRFHTPVLAFLNK 796373
Query: 148 ID 149
+D
Sbjct: 796372 MD 796367
>gi|154334717|ref|NC_009307.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 15
Length = 606948
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 545 TPALKKRARAGRGEATRQEESAERSEPSQH 574
T K+R RG+ RQ E+A+RS +QH
Sbjct: 254992 TSGTKERVGEARGDRQRQRENADRSSATQH 254903
TBLASTN 2.2.17 [Aug-26-2007]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|12746442|ref|NP_075547.1| eukaryotic elongation factor,
selenocysteine-tRNA-specific [Mus musculus]
(583 letters)
Database: genome.fa
35 sequences; 31,379,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154336958|ref|NC_009312.1| Leishmania braziliensis MHOM/BR/75... 278 6e-75
gi|154335720|ref|NC_009310.1| Leishmania braziliensis MHOM/BR/75... 92 1e-18
gi|154335377|ref|NC_009309.1| Leishmania braziliensis MHOM/BR/75... 82 1e-15
gi|154333023|ref|NC_009301.1| Leishmania braziliensis MHOM/BR/75... 64 4e-10
gi|154338566|ref|NC_009316.1| Leishmania braziliensis MHOM/BR/75... 52 9e-07
gi|154345382|ref|NC_009326.1| Leishmania braziliensis MHOM/BR/75... 47 4e-05
gi|154333587|ref|NC_009303.1| Leishmania braziliensis MHOM/BR/75... 43 6e-04
gi|154344351|ref|NC_009325.1| Leishmania braziliensis MHOM/BR/75... 43 7e-04
gi|154339085|ref|NC_009317.1| Leishmania braziliensis MHOM/BR/75... 39 0.014
gi|154343652|ref|NC_009324.1| Leishmania braziliensis MHOM/BR/75... 39 0.015
gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 35 0.23
gi|154340790|ref|NC_009320.1| Leishmania braziliensis MHOM/BR/75... 33 0.79
gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75... 32 0.91
gi|154332491|ref|NC_009299.1| Leishmania braziliensis MHOM/BR/75... 31 2.3
>gi|154336958|ref|NC_009312.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 20
Length = 1668259
Score = 278 bits (712), Expect = 6e-75, Method: Composition-based stats.
Identities = 209/663 (31%), Positives = 310/663 (46%), Gaps = 102/663 (15%)
Frame = +1
Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFVVPLPGAEPGSSD--- 69
LGH+DSGK FDK PQS+ RGITLDLGFS V + E G+ D
Sbjct: 1025989 LGHVDSGKTALAKALSRTASTAAFDKSPQSQSRGITLDLGFSACEVSV---EDGNEDACE 1026159
Query: 70 -------TLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQI 122
T +Q TLVDCPGHASLIRT++GGAQIID M+LVID TKGMQ Q+AECLV+G++
Sbjct: 1026160 VLRSAELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQAQTAECLVLGEV 1026339
Query: 123 ACQKLVVVLNKIDLLAEGKRQAAIDKMT---KKMQKTLENTKFRGAPIIPVXXXXXXXXX 179
+ LVVVLNK+D + +A + +++Q+T T++ I+ V
Sbjct: 1026340 MAKPLVVVLNKVDAVQGATPEAKAATLAALKRRLQQTFRRTRWPTVVIVEVAAAPREVMG 1026519
Query: 180 XXXXXXXXISELIELLK-----SQISIPTRDPSGP--FLMSVDHCFSIKGQGTVMTGTIL 232
+ L ++L+ + + R+ P F M VDHCF+++GQGTV TGT++
Sbjct: 1026520 RIGPPVNTEAVLPQVLRVVDLVALKAAKEREGERPERFYMLVDHCFAVRGQGTVFTGTVV 1026699
Query: 233 SGTISLGDSVEIPALKVVKKVKSMQMFHTPVTSAMQGDRLGICVTQFDPKLLERGLVCAP 292
+G + +GD+V +P L++ +KVK +Q+FH PV A GDR+G+CV QFDP +ERG++C+
Sbjct: 1026700 AGMVQVGDTVLVPELQMTRKVKGLQVFHKPVGLARSGDRVGLCVAQFDPTRMERGVLCSA 1026879
Query: 293 ES----LHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRTLFFS-PAPDSFDL- 346
S L + V ++ Y P T KFHI++GH TVMG +FS PA + +L
Sbjct: 1026880 ASSGRTLANSSQLIAKVHRVRYHPLPCDTHTKFHISIGHATVMGTMRYFSRPARTNANLN 1027059
Query: 347 -EPVLDSFDLSREYLFQEQYLCKDSMPTATEGDDEADPKAGHAPGGHCPRQQ--WALVEF 403
D FD E + E+ D + + + A P P +Q +A++
Sbjct: 1027060 VSGAADRFDPFIESTWVEEL--GDEVVLSYNTSTSSTASAPGQPLLPAPAEQDYYAVLLL 1027233
Query: 404 EKPVTCPRLCLVIGSRLDADIHTNTCRLAFHGVLLQGL-EDKNYIESFLPA--------- 453
E+PV +I RLD + N CR+A G + ED + + P
Sbjct: 1027234 ERPVLAAPGVFMIAMRLDVE-RENFCRIALAGTVCHVFSEDSPAVTAATPTLGDSEHSSN 1027410
Query: 454 ---------LRVYKLKHKHGLVERVMDDYSVIGRSLFKKET------------------- 485
L V + +++ V RV+D S I + +T
Sbjct: 1027411 HTQVPAWRRLPVVRYRYRTLRVNRVLDSRSCIATGVVSLQTPGDGGGSATPARAFSSAKR 1027590
Query: 486 -----------------NIQLFVGLKVQLSTGE----------------QGIIDSAFGQS 512
+Q F+ L V + +GIIDS+FG++
Sbjct: 1027591 NKDSVNGEERQKADLFAEVQKFLRLVVVFEPEDADASVTAPQTSNLGTVKGIIDSSFGKT 1027770
Query: 513 GKFKIHI--PGGLSPESKKILTPTLKKRSRAGRGETTKPEEGTERPEPIQPVTLNLSFKR 570
GK K+ P P + PT +R + + + + ++P + L K+
Sbjct: 1027771 GKVKLIFDDPVFADPAANTTTAPTSNRRKKKSATDPSAEDGSNSGGVFLRPGRILLILKK 1027950
Query: 571 YVF 573
Y F
Sbjct: 1027951 YPF 1027959
Score = 29.3 bits (64), Expect = 8.8, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 45/99 (45%)
Frame = +2
Query: 37 DKQPQSRERGITLDLGFSCFVVPLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQII 96
D+ +ERGIT+ +C V+ L E G T V L+D PGH + +
Sbjct: 200984 DRLQVEKERGITIK-AQTCSVL-LTLRETG---TQYLVNLIDTPGHVDFQYEVSRSLRAS 201148
Query: 97 DLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 135
+ L++DV +G++ Q+ ++ VL K+D
Sbjct: 201149 EGAALLVDVRQGVEAQTMAQFYAALEQNLTILPVLTKMD 201265
>gi|154335720|ref|NC_009310.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 18
Length = 708397
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 99/424 (23%), Positives = 159/424 (37%), Gaps = 27/424 (6%)
Frame = +1
Query: 13 LGHIDSGKXXXXXXXXXXXXXX---------XFDKQPQSRERGITLDLGFSCFVVPLPGA 63
+GH+D GK DK P+ + R IT++
Sbjct: 323551 IGHVDHGKTTLTSAITTVLAKRGQAQAMDYFAIDKSPEEKSRKITIN-----------AT 323697
Query: 64 EPGSSDTLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVI-GQI 122
+DCPGH ++ +I GA +D ++V+ T G+ Q+ E L+I QI
Sbjct: 323698 HVEYESEKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICSQI 323877
Query: 123 ACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXX 182
LV +NK+D+ E D + ++++ LE KF V
Sbjct: 323878 GLPALVGFINKVDMTDED----TCDLVDMEVREQLEKYKFPAEETPIVRGSALKAVEGDA 324045
Query: 183 XXXXXISELIELLKSQISIPTRDPSGPFLMSVDHCFSI--KGQGTVMTGTILSGTISLGD 240
I EL++ I P R+ PFLM+++H + I + ++TG + G + L
Sbjct: 324046 KYEEKILELVKKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGLLKLNT 324225
Query: 241 SVEIPALKVVK---KVKSMQMFHTPVTSAMQGDRLGICV------TQFDPKLLERGLV-C 290
E+ + K KV ++M+H + M GD +G+ + T +ERG+V
Sbjct: 324226 DAELAGFRAKKSTVKVTGIEMYHKTLNECMPGDSVGVSIVGTGDTTSLSKDNVERGMVMA 324405
Query: 291 APESLHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRTLFFSPAPDSFDLEPVL 350
AP S + L K K + V + GR FSP
Sbjct: 324406 APGSTN------------------LYNKVKAQVYVLTKDEGGRHTGFSP----------- 324498
Query: 351 DSFDLSREYLFQEQYLCKD-----SMPTATEGDDEADPKAGHAPGGHCPRQQWALVEFEK 405
Y Q + C D S P A + +E + K G P +++ + EFE
Sbjct: 324499 -------HYRPQLFFHCADVTADLSFPEAEKHREELNKKYGRGPEED-KKKEAEMREFES 324654
Query: 406 PVTC 409
+ C
Sbjct: 324655 KLVC 324666
>gi|154335377|ref|NC_009309.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 17
Length = 694732
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 12/268 (4%)
Frame = -1
Query: 36 FDKQPQSRERGITLDLGFSCFVVPLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQI 95
DK RERGIT+D+ F P T++D PGH I+ +I G
Sbjct: 31117 LDKLKAERERGITIDIALWKFESPKS-----------VFTIIDAPGHRDFIKNMITGTSQ 30971
Query: 96 IDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNKIDLLAEGKRQAAID 147
D +L+ID T+G Q+ E L+ + +++VV NK+D QA +
Sbjct: 30970 ADAAILMIDSTQGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVQYSQARYE 30791
Query: 148 KMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXIS--ELIELLKSQISIPT 203
+++K++ L+ + + IP+ L++ L + P
Sbjct: 30790 EISKEVGTYLKRVGYNPEKVRFIPISGWQGDNMIDKSESMAWYKGPTLLDAL-DMLEAPV 30614
Query: 204 RDPSGPFLMSVDHCFSIKGQGTVMTGTILSGTISLGDSVEIPALKVVKKVKSMQMFHTPV 263
R P + + + I G GTV G + +G + GD V V +VKS++M H +
Sbjct: 30613 RPVDKPLRLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIEMHHEQL 30434
Query: 264 TSAMQGDRLGICVTQFDPKLLERGLVCA 291
A+ GD +G V K + RG VC
Sbjct: 30433 AEAVPGDNVGFNVKNVSVKDIRRGNVCG 30350
>gi|154333023|ref|NC_009301.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 9
Length = 556710
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Frame = -2
Query: 75 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQ-IACQKLVVVLN 132
+ VDCPGH L+ T++ GA I+D +L+I + Q Q+ E L + I L+V+ N
Sbjct: 427889 SFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLAAAEMIGVSSLIVLQN 427710
Query: 133 KIDLLAEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXI---- 188
KIDL+++ A + + + T + AP++P+ I
Sbjct: 427709 KIDLVSKAHAAAQYNVIHHYLTT---KTAYAKAPVVPICAQKQINVSFLLDYLVHIPLPR 427539
Query: 189 -----SELIELLKS-QISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGTISLGDSV 242
++ + +L+S +S+P P+G M++ QG V+ GT+ +G + +GD +
Sbjct: 427538 RQLRHTQYLNVLRSFDVSLP--GPAGHNAMAL--------QGGVVGGTVAAGVLCVGDEI 427389
Query: 243 E-IPALKVVKK 252
E IP L V+++
Sbjct: 427388 EIIPGLLVLRR 427356
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 86/181 (47%), Gaps = 11/181 (6%)
Frame = -1
Query: 75 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQI-ACQKLVVVLN 132
+ VDCPGH L+ T++ GA I+D +L+I + Q Q+ E L +I + LVV+ N
Sbjct: 422127 SFVDCPGHDVLMATMLNGAAIMDAALLLIAANESFPQPQTLEHLKAVEIMKLRHLVVLQN 421948
Query: 133 KIDLLAEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXISELI 192
KIDL+ E K A D+ ++++ L+N PI+P+ + L+
Sbjct: 421947 KIDLVGEVK---AHDQY-RQVRAYLDNIAL-NVPIVPI----------SAQLKRNVDYLL 421813
Query: 193 ELLKSQISIPTRDPSGPFLMSVDHCFSI---------KGQGTVMTGTILSGTISLGDSVE 243
E L I +P R P M+V F I + +G V GT+ G I +G VE
Sbjct: 421812 EYL-LHIPMPVRQLKAPVRMTVVRSFDINKPGEGDIERLKGGVAGGTVTQGVIKVGQVVE 421636
Query: 244 I 244
I
Sbjct: 421635 I 421633
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +3
Query: 225 TVMTGTILSGTISLGDSVEIPALKVVKKVKSMQMFHTPVTSAMQGDRLGICVTQFDPKLL 284
T+M G ILSG ++ D+ I A+ V + KS M H T + + L +C T+ D ++
Sbjct: 291429 TIMPG*ILSGVVAGDDAAVISAISVSAQWKSAAM*HHWRTRQAKAE-LSMC-TRSDIRIA 291602
Query: 285 ERGLVCAP 292
R + CAP
Sbjct: 291603 SR-VPCAP 291623
>gi|154338566|ref|NC_009316.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 24
Length = 847824
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = -2
Query: 56 FVVPLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE 115
F +P PGA+ T +D PGH + T I D+++LVI V +G+++Q+ E
Sbjct: 549785 FTIPRPGADKD------LFTFIDTPGHRIFVETRFHVHLIADVIVLVISVAEGIESQTHE 549624
Query: 116 CLVIGQIACQKLVVVLNKIDLLAEG 140
+ + + ++VVLNK+DLL++
Sbjct: 549623 TIKVALNVDKPVIVVLNKLDLLSDA 549549
>gi|154345382|ref|NC_009326.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 34
Length = 2012684
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 12/234 (5%)
Frame = +1
Query: 36 FDKQPQSRERGITLDLGFSCFVVPLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQI 95
D+ + R RG+T+D G CF +V ++D PGH + ++I A
Sbjct: 1573198 LDQCEEERRRGVTIDSGSFCF-----------ETEHRRVHILDAPGHKDFVVSMISSATQ 1573344
Query: 96 IDLMMLVI-----DVTKGMQTQSAECL-VIGQIACQKLVVVLNKIDLLAEGKRQAAIDKM 149
D +LV+ + G+Q + L V+ + +VV +NK+D + G Q D +
Sbjct: 1573345 ADAAVLVVTAATSEFETGLQHGTKSHLRVLKTLGVGSIVVAVNKMDFV--GYSQERYDYV 1573518
Query: 150 TKKMQKTLENTKFRG------APIIPVXXXXXXXXXXXXXXXXXISELIELLKSQISIPT 203
+++Q ++ T+ PI + LIE++ + + +
Sbjct: 1573519 VRELQLLMKQTRIPEEAIVGFCPISGMTGVNLTQRDAKAMPWYTGPSLIEMI-DKCPLES 1573695
Query: 204 RDPSGPFLMSVDHCFSIKGQGTVMTGTILSGTISLGDSVEIPALKVVKKVKSMQ 257
R + P +S+ Q T + + SG GD+V+ +V VKS+Q
Sbjct: 1573696 RLVNSPLRLSLQDV-----QSTTLYAKVESGKFFTGDTVQFVPSEVRVVVKSIQ 1573842
>gi|154333587|ref|NC_009303.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 11
Length = 558624
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 62/286 (21%), Positives = 116/286 (40%), Gaps = 24/286 (8%)
Frame = +1
Query: 37 DKQPQSRERGITLDLGFSCFVVPLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQII 96
D + R +GIT + G + F +VT++D PGH + + ++IGGA
Sbjct: 446851 DVSEEERSKGITRETGAAYF-----------ETERRRVTVLDAPGHKAFVPSMIGGATQA 446997
Query: 97 DLMMLVID---------VTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAID 147
D+ +LVI KG QT+ +++ ++++ V+NK+D + K + D
Sbjct: 446998 DVCVLVISSRTGEFETGFEKGGQTRE-HAMLVRTCGVKQMICVINKMDEMKWSKER--YD 447168
Query: 148 KMTKKMQKTLENTKF-----RGAPIIPVXXXXXXXXXXXXXXX-------XXISELIELL 195
++ K++ L + + +PV + +I+ L
Sbjct: 447169 EIVGKLKPFLRQNGYDEERAKNLIFMPVAGLTGENLIKHVELSHCDWYKGETMMGVIDSL 447348
Query: 196 KSQISIPTRDPSGPFLMSVDHCFSIKGQG-TVMTGTILSGTISLGDSVEIPALKVVKKVK 254
K S D ++ + + K G T + G + SG+I++G+ +++ KV V+
Sbjct: 447349 KLPESKTDDD-----VLCIPLVGAYKDDGKTHIYGKVESGSIAVGEKIQVLPTKVEALVE 447513
Query: 255 SMQMFHTPVTSAMQGDRLGICVTQFDPKLLERGLVCA--PESLHTV 298
+ + T GD + + V D + G V P SL V
Sbjct: 447514 GISIESTEFEKCYPGDNVHLHVRGIDESDIHGGYVATSIPTSLRAV 447651
>gi|154344351|ref|NC_009325.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 33
Length = 1504429
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +3
Query: 76 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 135
++D PGH S G+ + D+ +LV+D+ G++ Q+ E + + + +V LNK+D
Sbjct: 1181700 VIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESIRLLREKRCPFIVALNKVD 1181879
Query: 136 LLAEGKRQAAID-KMTKKMQKTLENTKF 162
L + + +D + + ++QK ++F
Sbjct: 1181880 RLFDWEPHENMDIQQSVELQKAHVRSEF 1181963
>gi|154339085|ref|NC_009317.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 25
Length = 923860
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 12/255 (4%)
Frame = -2
Query: 37 DKQPQSRERGITLDLGFSCFVVPLPGAEPGSSDTLLQVTLVDCPGHASLIRTIIGGAQII 96
D + Q RERGIT+ L + +V G ++ +VD PGH + Q++
Sbjct: 36186 DSKDQERERGITI-LAKNTAIVLDNGKR--------RINIVDTPGHLDFSGEVERALQMV 36034
Query: 97 DLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDL--LAEGKRQAAIDKM---TK 151
+ ++L++D +G++ + L + +V LNKID L K + A++ +
Sbjct: 36033 EGIILLVDAKEGVRPGTRYVLRKALSLHLRPIVCLNKIDKDDLNIAKTEKAVEDLFLEAA 35854
Query: 152 KMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXISELIELLKSQISIPTRDPSGPFL 211
+ + LE G+ ++ L + + S + P +
Sbjct: 35853 QDESQLEMKFLYGS-------GRNGYMNEEPRQEGTLTPLFDTIFSTVPAPKAEDEQTLQ 35695
Query: 212 MSVDHCFSIKGQGTVMT-GTILSGTISLGD--SVEIPALKVVKKVKSMQMF----HTPVT 264
M V + GT + G I +G + GD +V + + VKS+ ++ PVT
Sbjct: 35694 MLVAQVDEDEQNGTKLAIGRIYNGAVQTGDVVTVALEERQTDALVKSIHLYCGVQKMPVT 35515
Query: 265 SAMQGDRLGICVTQF 279
A GD IC+ +
Sbjct: 35514 RASYGD---ICILEL 35479
>gi|154343652|ref|NC_009324.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 32
Length = 1579615
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 73 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQ-KLVVVL 131
Q+T++D PGH LI G ++ D ++ +DV + + S L + Q +V+V+
Sbjct: 867754 QITVIDTPGHPDLIGETASGMRLADAVLFCVDVAESLSDHSERLLRHAVVNEQLPIVLVI 867575
Query: 132 NKIDLL 137
K+D L
Sbjct: 867574 TKVDRL 867557
>gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 35
Length = 2686796
Score = 34.7 bits (78), Expect = 0.23, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -1
Query: 74 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 133
+ L+D PGH + ++ D ++V+D +G+ Q+ L + VV +NK
Sbjct: 86303 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVFINK 86124
Query: 134 ID 135
+D
Sbjct: 86123 VD 86118
Score = 34.3 bits (77), Expect = 0.29, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -2
Query: 74 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 133
+ L+D PGH + ++ D ++V+D +G+ Q+ L + VV +NK
Sbjct: 82798 INLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETVLRQALTERIRPVVFINK 82619
Query: 134 ID 135
+D
Sbjct: 82618 VD 82613
>gi|154340790|ref|NC_009320.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 28
Length = 1173595
Score = 32.7 bits (73), Expect = 0.79, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -1
Query: 74 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 133
+ L+D PGH + +++D ++ + D + G+Q QS L + ++ LNK
Sbjct: 796552 INLIDTPGHVDFAVEVERAMRVVDGVVALFDASAGVQAQSYTVLQQSRRFHTPVLAFLNK 796373
Query: 134 ID 135
+D
Sbjct: 796372 MD 796367
>gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 22
Length = 657844
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +3
Query: 477 GRSLFKKETNIQLFVGLKVQLSTGEQGIIDSAFGQSGKFKIHI-PGG--LSPESKKILTP 533
GR+ F K + + L E+GII S G + + PG L+PE + L
Sbjct: 531978 GRNAFLKLQKVVWRYAVAGMLVAQEKGIITSTTTCGGFTTVAVVPGAASLAPEDRCKLLL 532157
Query: 534 TLKKRSRAGRGETTKPEEGTERPEPIQPV 562
T + R GRG + GT EP++ V
Sbjct: 532158 TRHEAHRHGRG*SRARRSGTAAAEPVRAV 532244
>gi|154332491|ref|NC_009299.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 7
Length = 586128
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 385 AGHAPGGHCPRQQWALVEFEKPVTCPR 411
G P G C QQW + P CPR
Sbjct: 467761 GGGVPAGRCTLQQWCWPSIDGPSCCPR 467841
TBLASTN 2.2.17 [Aug-26-2007]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|19922690|ref|NP_611584.1| EfSec [Drosophila melanogaster]
(511 letters)
Database: genome.fa
35 sequences; 31,379,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154336958|ref|NC_009312.1| Leishmania braziliensis MHOM/BR/75... 274 1e-73
gi|154335720|ref|NC_009310.1| Leishmania braziliensis MHOM/BR/75... 104 2e-22
gi|154333023|ref|NC_009301.1| Leishmania braziliensis MHOM/BR/75... 86 9e-17
gi|154335377|ref|NC_009309.1| Leishmania braziliensis MHOM/BR/75... 83 5e-16
gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75... 66 7e-11
gi|154339085|ref|NC_009317.1| Leishmania braziliensis MHOM/BR/75... 62 9e-10
gi|154338566|ref|NC_009316.1| Leishmania braziliensis MHOM/BR/75... 55 9e-08
gi|154333587|ref|NC_009303.1| Leishmania braziliensis MHOM/BR/75... 51 2e-06
gi|154344351|ref|NC_009325.1| Leishmania braziliensis MHOM/BR/75... 50 4e-06
gi|154340790|ref|NC_009320.1| Leishmania braziliensis MHOM/BR/75... 49 7e-06
gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75... 45 1e-04
gi|154345382|ref|NC_009326.1| Leishmania braziliensis MHOM/BR/75... 36 0.057
gi|154343652|ref|NC_009324.1| Leishmania braziliensis MHOM/BR/75... 31 2.7
>gi|154336958|ref|NC_009312.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 20
Length = 1668259
Score = 274 bits (700), Expect = 1e-73, Method: Composition-based stats.
Identities = 184/461 (39%), Positives = 247/461 (53%), Gaps = 67/461 (14%)
Frame = +1
Query: 3 INFNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV------- 55
+N NIGLLGHVDSGKT LAKALS +STAAFDK+PQS RGITLDLGFS V
Sbjct: 1025968 LNVNIGLLGHVDSGKTALAKALSRTASTAAFDKSPQSQSRGITLDLGFSACEVSVEDGNE 1026147
Query: 56 DAPAHLPQGE--QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLI 113
DA L E ++Q T VDCPGHASLIRT++GGAQIID M+LV+DA KG Q QTAECL+
Sbjct: 1026148 DACEVLRSAELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVIDATKGMQAQTAECLV 1026327
Query: 114 IGELLQKKLIVVINKIDVY----PENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSAL 169
+GE++ K L+VV+NK+D PE + A+ R RL +T T + V + +A
Sbjct: 1026328 LGEVMAKPLVVVLNKVDAVQGATPEAKAATLAALKR-RLQQTFRRTRWPTVVIVEVAAAP 1026504
Query: 170 Q------GTHI---AELREVLR-------EAYFQPQRNLADPLFMYVDHCFGIKGQGTVC 213
+ G + A L +VLR +A + + + +M VDHCF ++GQGTV
Sbjct: 1026505 REVMGRIGPPVNTEAVLPQVLRVVDLVALKAAKEREGERPERFYMLVDHCFAVRGQGTVF 1026684
Query: 214 TGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVTQFNAKLLERG 273
TGT++ G VQV + + +P L RKVK +Q+F K V A GDR+GLCV QF+ +ERG
Sbjct: 1026685 TGTVVAGMVQVGDTVLVPELQMTRKVKGLQVFHKPVGLARSGDRVGLCVAQFDPTRMERG 1026864
Query: 274 IITQPGYLKPIYAVCLQF----KPIRYYKEVIKSMRKMHISVGHNTVMANVTLFR----- 324
++ A Q +RY+ + K HIS+GH TVM + F
Sbjct: 1026865 VLCSAASSGRTLANSSQLIAKVHRVRYHPLPCDTHTKFHISIGHATVMGTMRYFSRPART 1027044
Query: 325 ----DTDGTTSTFQLDKEYEYMEDV-------------------------QPAEVQHNDV 355
+ G F E ++E++ PAE +
Sbjct: 1027045 NANLNVSGAADRFDPFIESTWVEELGDEVVLSYNTSTSSTASAPGQPLLPAPAEQDY--- 1027215
Query: 356 IYALLQFESPVLSPPHSTLIASKLDMDVHSTSCRLAFWGRI 396
YA+L E PVL+ P +IA +LD++ CR+A G +
Sbjct: 1027216 -YAVLLLERPVLAAPGVFMIAMRLDVE-RENFCRIALAGTV 1027332
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Frame = +2
Query: 6 NIGLLGHVDSGKTTLAKALSSIS-------STAAF-DKNPQSVERGITLDLGFSGLLVDA 57
N+ ++ HVD GKTTLA A+ S +T F D+ ERGIT+ +L+
Sbjct: 200876 NVSVVAHVDHGKTTLADAMLRFSNLLPADGATGTFTDRLQVEKERGITIKAQTCSVLLTL 201055
Query: 58 PAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQT 108
G Q +D PGH + + + L+VD ++G + QT
Sbjct: 201056 RE---TGTQYLVNLIDTPGHVDFQYEVSRSLRASEGAALLVDVRQGVEAQT 201199
>gi|154335720|ref|NC_009310.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 18
Length = 708397
Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats.
Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 32/305 (10%)
Frame = +1
Query: 7 IGLLGHVDSGKTTLAKALSSISSTA---------AFDKNPQSVERGITLDLGFSGLLVDA 57
IG +GHVD GKTTL A++++ + A DK+P+ R IT++
Sbjct: 323542 IGTIGHVDHGKTTLTSAITTVLAKRGQAQAMDYFAIDKSPEEKSRKITIN---------- 323691
Query: 58 PAHLP-QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII-G 115
H+ + E+ + +DCPGH ++ +I GA +D ++VV A G QT E L+I
Sbjct: 323692 ATHVEYESEKRHYGHIDCPGHMDFVKNMITGAAQMDGGIIVVAATDGVMPQTREHLLICS 323871
Query: 116 ELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTF-GGQVPICAVSALQGTH- 173
++ L+ INK+D+ E+ + + + + + LE F + PI SAL+
Sbjct: 323872 QIGLPALVGFINKVDMTDED----TCDLVDMEVREQLEKYKFPAEETPIVRGSALKAVEG 324039
Query: 174 -------IAELREVLREAYFQPQRNLADPLFMYVDHCF--GIKGQGTVCTGTLLQGKVQV 224
I EL + E P RN P M ++H + G + + TG + QG +++
Sbjct: 324040 DAKYEEKILELVKKCDEWIPDPPRNTDKPFLMAIEHVYEIGKDKKSVIVTGRVDQGLLKL 324219
Query: 225 NNVIELPALGEQR---KVKSIQMFRKNVTSASMGDRIGLCV------TQFNAKLLERG-I 274
N EL ++ KV I+M+ K + GD +G+ + T + +ERG +
Sbjct: 324220 NTDAELAGFRAKKSTVKVTGIEMYHKTLNECMPGDSVGVSIVGTGDTTSLSKDNVERGMV 324399
Query: 275 ITQPG 279
+ PG
Sbjct: 324400 MAAPG 324414
>gi|154333023|ref|NC_009301.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 9
Length = 556710
Score = 85.5 bits (210), Expect = 9e-17, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 36/268 (13%)
Frame = -1
Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV---------- 55
N+G +GHV GK+T+ KALS + + K + IT+ LG++ V
Sbjct: 422379 NVGTIGHVAHGKSTVVKALSGVKT----QKFHREAVMNITIHLGYANAKVYQCETCPRPT 422212
Query: 56 ---DAPAHLPQGE-----------QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101
P+ P + F+FVDCPGH L+ T++ GA I+D LL++ A
Sbjct: 422211 CYQAYPSSQPDSTPCPNCGKTMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAAN 422032
Query: 102 KG-KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159
+ Q QT E L E+++ + L+V+ NKID+ E + + ++R L
Sbjct: 422031 ESFPQPQTLEHLKAVEIMKLRHLVVLQNKIDLVGEVKAHDQYRQVRAYL------DNIAL 421870
Query: 160 QVPICAVSALQGTHIAELREVLREAYFQPQRNLADPLFMYVDHCFGI---------KGQG 210
VPI +SA ++ L E L P R L P+ M V F I + +G
Sbjct: 421869 NVPIVPISAQLKRNVDYLLEYLLHIPM-PVRQLKAPVRMTVVRSFDINKPGEGDIERLKG 421693
Query: 211 TVCTGTLLQGKVQVNNVIEL-PALGEQR 237
V GT+ QG ++V V+E+ P L R
Sbjct: 421692 GVAGGTVTQGVIKVGQVVEIRPGLVRSR 421609
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 83/282 (29%), Positives = 122/282 (43%), Gaps = 35/282 (12%)
Frame = -2
Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLV---------- 55
N+G +GHV GK+T+ KALS + + K + IT+ LG++ V
Sbjct: 428141 NVGTIGHVAHGKSTVVKALSGVKT----QKFHREAVMNITIHLGYANAKVYQCETCPRPT 427974
Query: 56 ---DAPAHLPQGE-----------QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQ 101
P+ P + F+FVDCPGH L+ T++ GA I+D LL++ A
Sbjct: 427973 CYQAYPSSQPDSTPCPNCGKTMTLKRHFSFVDCPGHDVLMATMLNGAAIMDAALLLIAAN 427794
Query: 102 KG-KQTQTAECLIIGELLQ-KKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGG 159
+ Q QT E L E++ LIV+ NKID+ + A++ + L T A
Sbjct: 427793 ESFPQPQTLEHLAAAEMIGVSSLIVLQNKIDLVSKAHAAAQYNVIHHYLT-TKTAYAKAP 427617
Query: 160 QVPICAVSALQGT-------HIAELREVLREA-YFQPQRNLADPLFMYVDHCFGIKGQGT 211
VPICA + + HI R LR Y R+ L H + QG
Sbjct: 427616 VVPICAQKQINVSFLLDYLVHIPLPRRQLRHTQYLNVLRSFDVSLPGPAGHN-AMALQGG 427440
Query: 212 VCTGTLLQGKVQVNNVIE-LPALGEQRKVKSIQMFRKNVTSA 252
V GT+ G + V + IE +P L R+ + R +V S
Sbjct: 427439 VVGGTVAAGVLCVGDEIEIIPGLLVLRRRDGVLPRRSDVLSG 427314
>gi|154335377|ref|NC_009309.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 17
Length = 694732
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 134/317 (42%), Gaps = 46/317 (14%)
Frame = -1
Query: 3 INFNIGLLGHVDSGKTTLAKAL------------------------SSISSTAAFDKNPQ 38
++ N+ ++GHVD+GK+T L +S DK
Sbjct: 31279 VHMNLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEMGKASFKYAWVLDKLKA 31100
Query: 39 SVERGITLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVV 98
ERGIT+D+ ++P + FT +D PGH I+ +I G D +L++
Sbjct: 31099 ERERGITIDIALWKF--ESPKSV-------FTIIDAPGHRDFIKNMITGTSQADAAILMI 30947
Query: 99 DAQKG-------KQTQTAE-CLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAK 150
D+ +G K QT E L+ L K+++V NK+D ++ E++ +
Sbjct: 30946 DSTQGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVQYSQARYEEISKEVGT 30767
Query: 151 TLEATTFGGQ-VPICAVSALQGTHIAELREVLREAYFQ-------------PQRNLADPL 196
L+ + + V +S QG ++ + E + A+++ P R + PL
Sbjct: 30766 YLKRVGYNPEKVRFIPISGWQGDNMIDKSESM--AWYKGPTLLDALDMLEAPVRPVDKPL 30593
Query: 197 FMYVDHCFGIKGQGTVCTGTLLQGKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGD 256
+ + + I G GTV G + G ++ +V+ +VKSI+M + + A GD
Sbjct: 30592 RLPLQDVYKIGGIGTVPVGRVETGIMKPGDVVTFAPANVTTEVKSIEMHHEQLAEAVPGD 30413
Query: 257 RIGLCVTQFNAKLLERG 273
+G V + K + RG
Sbjct: 30412 NVGFNVKNVSVKDIRRG 30362
>gi|154337694|ref|NC_009314.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 22
Length = 657844
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Frame = -3
Query: 7 IGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAP-AHLPQGE 65
+ ++GHVD GKTTL L ++ AA + GIT ++G V P H
Sbjct: 465176 VSIMGHVDHGKTTLLDHLRH-TNVAAVEAG------GITQNVG--AFQVKTPDGHF---- 465036
Query: 66 QLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVV 125
TF+D PGHA+ GA D+++LVV A G Q QT E + + ++V
Sbjct: 465035 ---ITFIDTPGHAAFTAMREVGATANDIIVLVVSAVDGVQPQTREVIELARRRGTPMVVA 464865
Query: 126 INKIDVYPENQRASKLEKLRLRLAKT-LEATTFGGQVPICAVSALQGTHIAELREVLR-- 182
+ KID P+ + +R +LA+ +E GG V + V A G + EL E L+
Sbjct: 464864 VTKIDRQPD------CDYVRDQLAENGVELEERGGDVQLVKVCAKDGRGVRELLEALQLQ 464703
Query: 183 --------------EAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTL 217
E Y RNL V C ++ + +GT+
Sbjct: 464702 AELCEVATPAPSRAELYVLESRNLGVSEVAAVVRCGTVRPGQVLVSGTI 464556
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 14/137 (10%)
Frame = -2
Query: 61 LPQGEQLQFTFVDCPGHA-------------SLIRTIIGGAQIIDLMLLVVDAQKGKQTQ 107
LP G LQ TFVD PG+ L G + ++ +L +D ++G
Sbjct: 259158 LPGG-GLQLTFVDLPGYGIEGMSDAWRDAAIELTDAYFGVRRSVNTVLYCMDCERGLTKT 258982
Query: 108 TAECLIIGELLQKKLIVVINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVP-ICAV 166
+ L E + VV+ K D P ++ S + ++ + K + P I V
Sbjct: 258981 DIKYLEWIENVHGTCFVVLTKCDSVPHSRVCSVMRQVYALITK--HRRKYRKVFPFILPV 258808
Query: 167 SALQGTHIAELREVLRE 183
SA GT++ LR ++ E
Sbjct: 258807 SAKDGTNMEVLRGLITE 258757
>gi|154339085|ref|NC_009317.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 25
Length = 923860
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 90/339 (26%), Positives = 145/339 (42%), Gaps = 37/339 (10%)
Frame = -2
Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA------FDKNPQSVERGITLDLGFSGLLVDAPA 59
NI ++ HVD GKTTL ++ S S T A D Q ERGIT+ + +++D
Sbjct: 36288 NIAVIAHVDHGKTTLVDSMLSQSGTVANAHNRVMDSKDQERERGITILAKNTAIVLD--- 36118
Query: 60 HLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQ 119
G++ + VD PGH + Q+++ ++L+VDA++G + T L L
Sbjct: 36117 ---NGKR-RINIVDTPGHLDFSGEVERALQMVEGIILLVDAKEGVRPGTRYVLRKALSLH 35950
Query: 120 KKLIVVINKIDVYPEN--QRASKLEKLRLRLAK---TLEATTF--GGQVPICAVSALQGT 172
+ IV +NKID N + +E L L A+ LE G+ Q
Sbjct: 35949 LRPIVCLNKIDKDDLNIAKTEKAVEDLFLEAAQDESQLEMKFLYGSGRNGYMNEEPRQEG 35770
Query: 173 HIAELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGT-VCTGTLLQGKVQVNNVIELP 231
+ L + + P+ L M V + GT + G + G VQ +V+ +
Sbjct: 35769 TLTPLFDTIFSTVPAPKAEDEQTLQMLVAQVDEDEQNGTKLAIGRIYNGAVQTGDVVTV- 35593
Query: 232 ALGEQRK---VKSIQMF----RKNVTSASMGDRIGLCVTQFNAKLLER------GIITQP 278
AL E++ VKSI ++ + VT AS GD +C+ + + + G I +
Sbjct: 35592 ALEERQTDALVKSIHLYCGVQKMPVTRASYGD---ICILELQEPIGMKVPLKIGGTIGKQ 35422
Query: 279 GYLK---------PIYAVCLQFKPIRYY-KEVIKSMRKM 307
+K P Y++ LQ + KE ++M KM
Sbjct: 35421 SAVKLFPYKKPDDPTYSLVLQESEASWKGKEATEAMGKM 35305
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Frame = -3
Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAA---------FDKNPQSVERGITLDLGFSGLLVD 56
N ++ HVD GKTTL+ L + + + D P ER IT+ L
Sbjct: 616505 NFCMVAHVDHGKTTLSDYLVASNGILSPQLAGEVRLLDSRPDEQERCITMKASSIAL--- 616335
Query: 57 APAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGE 116
H+ G VD PGH + ++ D +++VD G QT+ L
Sbjct: 616334 --RHVYAGTSHVLNLVDSPGHIDFSCEVSTAMRLCDGAVVIVDVVDGVTQQTSSILRHTY 616161
Query: 117 LLQKKLIVVINKIDVYPENQRASKLEK-LRLR 147
+ +V+NKID+ Q+ + E LRLR
Sbjct: 616160 REGLSMCLVLNKIDLLVTTQQYTAEEAYLRLR 616065
>gi|154338566|ref|NC_009316.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 24
Length = 847824
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 62/133 (46%)
Frame = -2
Query: 8 GLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGLLVDAPAHLPQGEQL 67
++GHV+ GKT L AL A + R T+ P ++
Sbjct: 549893 AVMGHVNHGKTALLDALQGSHIGAEEPHHITQSVRAFTIPR-------------PGADKD 549753
Query: 68 QFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQKKLIVVIN 127
FTF+D PGH + T I D+++LV+ +G ++QT E + + + K +IVV+N
Sbjct: 549752 LFTFIDTPGHRIFVETRFHVHLIADVIVLVISVAEGIESQTHETIKVALNVDKPVIVVLN 549573
Query: 128 KIDVYPENQRASK 140
K+D+ + A K
Sbjct: 549572 KLDLLSDAFSAEK 549534
>gi|154333587|ref|NC_009303.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 11
Length = 558624
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Frame = +1
Query: 4 NFNIGLLGHVDSGKTTLA------------KALSSISSTAAFDKNPQSVERGITLDLG-- 49
+FNI GHVD+GK+T++ + + + A + + E +D+
Sbjct: 446689 HFNIVFCGHVDAGKSTISGHLLMEKGLVDQREMEKLRREAEINHR-EGWEYAYVMDVSEE 446865
Query: 50 --FSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKG---- 103
G+ + A + E+ + T +D PGH + + ++IGGA D+ +LV+ ++ G
Sbjct: 446866 ERSKGITRETGAAYFETERRRVTVLDAPGHKAFVPSMIGGATQADVCVLVISSRTGEFET 447045
Query: 104 ---KQTQTAE-CLIIGELLQKKLIVVINKID 130
K QT E +++ K++I VINK+D
Sbjct: 447046 GFEKGGQTREHAMLVRTCGVKQMICVINKMD 447138
>gi|154344351|ref|NC_009325.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 33
Length = 1504429
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Frame = +3
Query: 9 LLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERG-ITLDLGFSGL----LVDAPAHLPQ 63
+LGHVD+GKT+L L I ST N Q E G IT +G + LV A L +
Sbjct: 1181508 VLGHVDTGKTSL---LDRIRST-----NVQGGEAGGITQQIGATFFPREALVSATEELIK 1181663
Query: 64 GEQLQFTF-----VDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELL 118
+D PGH S G+ + D+ +LVVD G + QT E + LL
Sbjct: 1181664 KHNCNLNVPGLLVIDTPGHESFTNLRSRGSSLCDIAILVVDIMHGLEQQTRESI---RLL 1181834
Query: 119 QKK---LIVVINKID 130
++K IV +NK+D
Sbjct: 1181835 REKRCPFIVALNKVD 1181879
>gi|154340790|ref|NC_009320.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 28
Length = 1173595
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 21/194 (10%)
Frame = -1
Query: 6 NIGLLGHVDSGKTT----------LAKALSSISS-TAAFDKNPQSVERGITLDLGFSGLL 54
NIG++ H+D+GKTT + K + + S T D + RGIT+ L
Sbjct: 796747 NIGIVAHIDAGKTTTTERMLFYAGVTKRVGDVDSGTTTTDFMAEEANRGITIQSAAVSL- 796571
Query: 55 VDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLII 114
+ +D PGH + +++D ++ + DA G Q Q+ L
Sbjct: 796570 --------RWRDHSINLIDTPGHVDFAVEVERAMRVVDGVVALFDASAGVQAQSYTVLQQ 796415
Query: 115 GELLQKKLIVVINKIDVYPENQRAS--------KLEKLRLRLAKTLEATTFGGQVPIC-- 164
++ +NK+D Y + S ++E L L++ E F G V I
Sbjct: 796414 SRRFHTPVLAFLNKMDKYNADFAMSVASIRTKLQVEPLLLQIPLHAEDGGFAGVVDIVEQ 796235
Query: 165 AVSALQGTHIAELR 178
A G H E+R
Sbjct: 796234 ATCCFGGDHGLEVR 796193
>gi|154346825|ref|NC_009327.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 35
Length = 2686796
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 14/139 (10%)
Frame = -2
Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAF---------DKNPQSVERGITLDLGFSGLLVD 56
N+ ++ HVD GK+TL+ +L + D + RGIT+ +
Sbjct: 83029 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISMHYH 82850
Query: 57 APAHLPQG-----EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111
P + +D PGH + ++ D L+VVD +G QT
Sbjct: 82849 VPKEMISSLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETV 82670
Query: 112 LIIGELLQKKLIVVINKID 130
L + + +V INK+D
Sbjct: 82669 LRQALTERIRPVVFINKVD 82613
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 14/139 (10%)
Frame = -1
Query: 6 NIGLLGHVDSGKTTLAKALSSISSTAAF---------DKNPQSVERGITLDLGFSGLLVD 56
N+ ++ HVD GK+TL+ +L + D + RGIT+ +
Sbjct: 86534 NMSVIAHVDHGKSTLSDSLVGAAGIIKMEEAGDKRIMDTRADEIARGITIKSTAISMHYH 86355
Query: 57 APAHLPQG-----EQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAEC 111
P + +D PGH + ++ D L+VVD +G QT
Sbjct: 86354 VPKEMISSLDDDKRDFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVEGVCVQTETV 86175
Query: 112 LIIGELLQKKLIVVINKID 130
L + + +V INK+D
Sbjct: 86174 LRQALTERIRPVVFINKVD 86118
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Frame = +2
Query: 6 NIGLLGHVDSGKTTLAKALSSISS-TAAFDKNPQSVERGITLDL----GFSGLLVDAPAH 60
NIG+ H+DSGKTTL++ + S + E G T+D G+ + + A
Sbjct: 186212 NIGISAHIDSGKTTLSERILFYSGRIGKIHEVKGGTEVGATMDSMELEKERGITIRSAAT 186391
Query: 61 LPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQTQTAECLIIGELLQK 120
+ + +D PGH + +++D +L++ A G Q+QT L + +++
Sbjct: 186392 QCRWKSSTINIIDTPGHVDFTIEVERALRVLDGAILLMCAVGGVQSQT---LTVDRQMKR 186562
Query: 121 ---KLIVVINKIDVYPEN-QRASKLEKLRL 146
I INK+D N QRA K + RL
Sbjct: 186563 YGVPRICFINKLDRDNANPQRALKQAQERL 186652
>gi|154345382|ref|NC_009326.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 34
Length = 2012684
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 34/202 (16%)
Frame = +1
Query: 9 LLGHVDSGKTTLA-------------------KALSSISSTAA-----FDKNPQSVERGI 44
+ GHVD+GK+T KA ++ A D+ + RG+
Sbjct: 1573054 IAGHVDAGKSTTLGHLLLLLGRVSSQDVERNEKAGRMLNKEACKYAWLLDQCEEERRRGV 1573233
Query: 45 TLDLGFSGLLVDAPAHLPQGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDA---- 100
T+D G + + E + +D PGH + ++I A D +LVV A
Sbjct: 1573234 TIDSG---------SFCFETEHRRVHILDAPGHKDFVVSMISSATQADAAVLVVTAATSE 1573386
Query: 101 -QKGKQTQTAECL-IIGELLQKKLIVVINKIDV--YPENQRASKLEKLRLRLAKTL--EA 154
+ G Q T L ++ L ++V +NK+D Y + + + +L+L + +T E
Sbjct: 1573387 FETGLQHGTKSHLRVLKTLGVGSIVVAVNKMDFVGYSQERYDYVVRELQLLMKQTRIPEE 1573566
Query: 155 TTFGGQVPICAVSALQGTHIAE 176
G C +S + G ++ +
Sbjct: 1573567 AIVG----FCPISGMTGVNLTQ 1573620
>gi|154343652|ref|NC_009324.1| Leishmania braziliensis MHOM/BR/75/M2904
chromosome 32
Length = 1579615
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 353 NDVIYALLQFESPVL--SPPHSTLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQEEL 410
N+++ L + PVL S S ++ DV ++SC +A G +A + + +L
Sbjct: 1280555 NELVRCALLWSEPVLDGSQGQSLVVLKGESTDVTASSCAVAAGGELATGAEEREKYARDL 1280734
Query: 411 PKLR 414
P+LR
Sbjct: 1280735 PQLR 1280746