T-COFFEE, Version_7.71(Mon Feb 23 21:41:54 WEST 2009)
Cedric Notredame 
CPU TIME:1 sec.
SCORE=86
*
 BAD AVG GOOD
*
SPP00000038_1.0   :  84
SPP00000092_1.0   :  85
SPP00000085_1.0   :  80
LmjF34_01_20050   :  89
LmjF34_01_20050   :  89
LmjF34_01_20050   :  91
cons              :  86

SPP00000038_1.0   MAG------RRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQ
SPP00000092_1.0   M---------PINFNIGLLGHVDSGKTTLAKALSSISSTAAFDKN
SPP00000085_1.0   MTSPPSTSSSVGPLNLGILGHVDSGKTTLTRRIAELGSTSAFDAH
LmjF34_01_20050   -----------LNVNIGLLGHVDSGKTALAKALSSTASTAAFDKS
LmjF34_01_20050   -----------LNVNIGLLGHVDSGKTALAKALSSTASTAAFDKS
LmjF34_01_20050   -------------VNIGLLGHVDSGKTALAKALSSTASTAAFDKS

cons                           .*:*:***:*****:*:: ::  .**:***  


SPP00000038_1.0   PQSRE----RGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPE
SPP00000092_1.0   PQSVE----RGITLDLGFSGLLVDAPAHLP---------------
SPP00000085_1.0   ATSTTTDGIRRNTLDLGFSTMTS----------------------
LmjF34_01_20050   PQSQS----RGITLDLGFSACEVSVEDGNEDATQVLRAA------
LmjF34_01_20050   PQSQS----RGITLDLGFSACEVSVEDGNEDATQVLRAA------
LmjF34_01_20050   PQSQS----RGITLDLGFSACEVSVEDGNEDATQVLRAA------

cons              . *      *  *******                          


SPP00000038_1.0   PGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQT
SPP00000092_1.0   -QGEQLQFTFVDCPGHASLIRTIIGGAQIIDLMLLVVDAQKGKQT
SPP00000085_1.0   --LSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAGIQP
LmjF34_01_20050   -ELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVVDATKGIQV
LmjF34_01_20050   -ELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVVDATKGIQV
LmjF34_01_20050   -ELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVVDATKGIQV

cons                    : :::*****:.***:::..: ::*  ::::*.  * * 


SPP00000038_1.0   QSAECLVIGQIA-CQKLVVVLNKIDLL----PEGKRQAAIDKMTK
SPP00000092_1.0   QTAECLIIGELL-QKKLIVVINKIDVY----PENQRASKLEKLRL
SPP00000085_1.0   QTAEHLLLASKFCPNRVIIVLNKCDLA----EKSKI----SESAK
LmjF34_01_20050   QTAECLVLGEVL-AKPLVVVLNKIDAIQGVSPAGK-EAALAALKR
LmjF34_01_20050   QTAECLVLGEVL-AKPLVVVLNKIDAIQGVSPAGK-EAALAALKR
LmjF34_01_20050   QTAECLVLGEVL-AKPLVVVLNKIDAIQGVSPAGK-EAALAALKR

cons              *:** *::..    : :::*:** *        .:          


SPP00000038_1.0   KMQKTLENTKFR-GAPIIPVAAKP-------GGPEAPETEAPQGI
SPP00000092_1.0   RLAKTLEATTFGGQVPICAVSALQ-------GTH----------I
SPP00000085_1.0   KVRKGLKSMGVDENSPIVEMSLAD-------GYF------KEEML
LmjF34_01_20050   KLQQVFRRTRWP-TVAIVEVAAAPREVAGGIGHPVNTEAVLPQVL
LmjF34_01_20050   KLQQVFRRTRWP-TVAIVEVAAAPREVAGGIGHPVNTEAVLPQVL
LmjF34_01_20050   KLQQVFRRTRWP-TVAIVEVAAAPREVAGGIGHPVNTEAVLPQVL

cons              :: : :.        .*  ::          *            :


SPP00000038_1.0   PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILS
SPP00000092_1.0   AELREVLREAYFQPQRNLADPLFMYVDHCFGIKGQGTVCTGTLLQ
SPP00000085_1.0   QNLKLAIESRIFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIR
LmjF34_01_20050   RAVDLAALKSAKESEAERPAQFYMLVDHCFAVRGQGTVFTGTVVA
LmjF34_01_20050   RAVDLAALKSAKESEAERPAQFYMLVDHCFAVRGQGTVFTGTVVA
LmjF34_01_20050   RAVDLAALKSAKESEAERPAQFYMLVDHCFAVRGQGTVFTGTVVA

cons                :     .    .  :    : : :****.::***** ***:: 


SPP00000038_1.0   GSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVT-
SPP00000092_1.0   GKVQVNNVIELPALGEQRKVKSIQMFRKNVTSASMGDRIGLCVT-
SPP00000085_1.0   GVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLVAP
LmjF34_01_20050   GVVRVGDTVLVPELQTTRKVKGLQAFHKPVELAQGGDRVGLCVA-
LmjF34_01_20050   GVVRVGDTVLVPELQTTRKVKGLQAFHKPVELAQGGDRVGLCVA-
LmjF34_01_20050   GVVRVGDTVLVPELQTTRKVKGLQAFHKPVELAQGGDRVGLCVA-

cons              * : :.  : .* *   ::** :: ::  :  .  * * .: *: 


SPP00000038_1.0   QFDPKLLERGLVCAPE----SLHTVHAALISVEKIPYFRGPLQTK
SPP00000092_1.0   QFNAKLLERGIITQPG----YLKPIYAVCLQFKPIRYYKEVIKSM
SPP00000085_1.0   SFDEHRFSRCICGPLG----TLKSTKFVLATVEPIQFFRKSINSK
LmjF34_01_20050   QFDPTWMERGVVCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTH
LmjF34_01_20050   QFDPTWMERGVVCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTH
LmjF34_01_20050   QFDPTWMERGVVCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTH

cons              .*:   :.* :          * .       .. : :.    .: 


SPP00000038_1.0   AKFHITVGHETVMGRLMFFSPAPD---NFDQEPILDSFNFSQEYL
SPP00000092_1.0   RKMHISVGHNTVMANVTLFR---------DTDGTTSTFQLDKEYE
SPP00000085_1.0   SKIHVAVAFETVMAECQFLKEKEN--GEFEMLPS-----------
LmjF34_01_20050   TRFHITIGHATVMGTMRYFARLPHANESLDVPGTVAAFDPSIESA
LmjF34_01_20050   TRFHITIGHATVMGTMRYFARLPHANESLDVPGTVAAFDPSIESA
LmjF34_01_20050   TRFHITIGHATVMGTMR----------------------------

cons               ::*:::.. ***.                               


SPP00000038_1.0   FQEQYLSKDLTPAVTDNDEADKKAGQATEGHC-PRQQWALVEFEK
SPP00000092_1.0   YMED-----VQPAEV---------------QH-NDVIYALLQFES
SPP00000085_1.0   ----------------------------LLAPCQ----VLFSFEK
LmjF34_01_20050   YVEEL-DDGVVARYTSTDTTAGVPGRPLPVAPAEQDYYAVLLLER
LmjF34_01_20050   YVEEL-DDGVVARYTSTDTTAGVPGRPLPVAPAEQDYYAVLLLER
LmjF34_01_20050   ---------------------------------------------

cons                                                           


SPP00000038_1.0   PVTCPRLC--LVIGSRLDADIHTNTCRLAFHGILLHGLEDRNYAD
SPP00000092_1.0   PVLSPPHS--TLIASKLDMDVHSTSCRLAFWGRIAWQTHSSKYFQ
SPP00000085_1.0   SIFLPENYSNPFMAARLEQQP-GSGCRFAFSGIFSQILPENG--K
LmjF34_01_20050   PVLAAPGL--SLIAMRLDVER-ENFCRIALAGTVC----------
LmjF34_01_20050   PVLAAPGL--SLIAMRLDVER-ENFCRIALAGT------------
LmjF34_01_20050   ---------------------------------------------

cons                                                           


SPP00000038_1.0   SFLPRLKVYKLKHKHGLVERAM-DDYSVIGRSLFKKETNIQLFVG
SPP00000092_1.0   EELPKLRIFKRKQKVGSIQRVV-NSSEVIVQNLFKD-AKRDLYVG
SPP00000085_1.0   NLPPR---FTRKCRKGHVERVEKDGFSAICTGMFKAETNFDVFRG
LmjF34_01_20050   ---------------------------------------------
LmjF34_01_20050   ---------------------------------------------
LmjF34_01_20050   ---------------------------------------------

cons                                                           


SPP00000038_1.0   LKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKK
SPP00000092_1.0   KNVELSTGEKGRIERTFGQTSKVAITFQDALSPETI---------
SPP00000085_1.0   FQICTSSGPRGKIEGAFGKSGKFRVTFAEKIDG----IL------
LmjF34_01_20050   ---------------------------------------------
LmjF34_01_20050   ---------------------------------------------
LmjF34_01_20050   ---------------------------------------------

cons                                                           


SPP00000038_1.0   RARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKRMVQS
SPP00000092_1.0   -------------------SNVKNVKVLLNCKKYVFNKQA--GLF
SPP00000085_1.0   -------------------TEKE--EISLFLKKYHNENRLVSYVP
LmjF34_01_20050   ---------------------------------------------
LmjF34_01_20050   ---------------------------------------------
LmjF34_01_20050   ---------------------------------------------

cons                                                           


SPP00000038_1.0   P
SPP00000092_1.0   Q
SPP00000085_1.0   D
LmjF34_01_20050   H
LmjF34_01_20050   V
LmjF34_01_20050   Y

cons               
