
genewise output
Score 350.13 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000038_1.0    6 VNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFS 
                     +NVN+G+LGH+DSGKTALA+ALS+TASTAAFDK PQS+ RGITLDLGFS 
                     LNVNIGLLGHVDSGKTALAKALSSTASTAAFDKSPQSQSRGITLDLGFS 
LmjF34_01_20050 3000 tagaagccgcggagaagcgagctaagtaggtgaaccactcgaacgcgta 
                     tatatgttgataggacctcactcgcccccctaagcagacggtctatgtg 
                     atgctgtctttttcggggcggggctccttcttgtggtgatgtgccctct 


SPP00000038_1.0   55 CFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTI 
                        V +      +   ++AA   +        Q TLVDCPGHASLIRT+ 
                     ACEVSVEDGNEDATQVLRAAELTK-------VQCTLVDCPGHASLIRTV 
LmjF34_01_20050 3147 gtggtggggagggacgccgggtaa       gctacggtcgcgtcacag 
                     cgatctaagaaaccattgccatca       tagcttagcgaccttgct 
                     ctagccacccgtccagggacggcg       ggcggcccaacgagtcag 


SPP00000038_1.0  104 IGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLL- 
                     +GGAQIID M+LV+D TKG+Q Q+AECLV+G++  + LVVVLNKID +  
                     VGGAQIIDAMVLVVDATKGIQVQTAECLVLGEVLAKPLVVVLNKIDAIQ 
LmjF34_01_20050 3273 ggggcaaggagtggggaagacgcaggtcgcgggcgaccgggcaaaggac 
                     tggcattactttttaccagtataccagtttgattcactttttaatacta 
                     ttaggatcagggcccacgtcagggtgtacgcgggcggcctagcgacgta 


SPP00000038_1.0  152 ---PEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKP-------GG 
                        P GK  AA+  + +K+Q+    T++    I+ VAA P       G  
                     GVSPAGK-EAALAALKRKLQQVFRRTRWPTVAIVEVAAAPREVAGGIGH 
LmjF34_01_20050 3420 ggtcgga gggtggcaaacccgtccactcaggaggggggccgggggagc 
                     gtcccga acctcctagataattggcggcctcttatccccgatcggtga 
                     cagaata ggaggccgaaggggtccgggcgactggggtcacgggcgctc 


SPP00000038_1.0  191 PEAPETEAPQGIPEL-IELLTSQISIPTRDPSGPFLMSVDHCFSIKGQG 
                     P   E   PQ +  + +  L S        P+  F M VDHCF+++GQG 
                     PVNTEAVLPQVLRAVDLAALKSAKESEAERPA-QFYMLVDHCFAVRGQG 
LmjF34_01_20050 3564 cgaagggtccgccgggcggcatgagagggacg cttacggcttggcgcg 
                     ctacacttcattgctatcctaccaagacagcc atatttaagtctggag 
                     cgcgggtgtgggcgcccgcggtcagcgcggag gccgtgtccccggtgc 


SPP00000038_1.0  239 TVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLG 
                     TV+TGT+++G + +GD+V +P L+  +KVK +Q FH P+  A+ GDR+G 
                     TVFTGTVVAGVVRVGDTVLVPELQTTRKVKGLQAFHKPVELAQGGDRVG 
LmjF34_01_20050 3708 agtagaggggggcgggagcgcgccaacagagccgtcacggtgcgggcgg 
                     cttcgcttcgttgtgactttcataccgatagtactaactatcaggagtg 
                     caccgttctcctccgcggcgggggcgcaaaggggtcggcggggcgcggg 


SPP00000038_1.0  288 ICVTQFDPKLLERGLVCAPES----LHTVHAALISVEKIPYFRGPLQTK 
                     +CV QFDP  +ERG+VC+  S    L +    +  V ++ Y   P  T  
                     LCVAQFDPTWMERGVVCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTH 
LmjF34_01_20050 3855 ctggctgcatagcgggtaggaagcacgattccagcgccgctcccctgac 
                     tgtcataccgtaggttggccggggcttgccattcgtagtgaactcgaca 
                     gtgtgtctggggccctcccactcagggccaggcgggttgctcaggccgc 


SPP00000038_1.0  333 AKFHITVGHETVMGRLMFFSPAP---DNFDQEPILDSFNFSQEYLFQEQ 
                      +FHIT+GH TVMG + +F+  P    ++D    + +F+ S E  + E+ 
                     TRFHITIGHATVMGTMRYFARLPHANESLDVPGTVAAFDPSIESAYVEE 
LmjF34_01_20050 4002 aatcaaagcgagagaaattgacccgagacggcgagggtgctagagtggg 
                     cgtatctgaccttgctgatcgtcacaagtatcgctcctacctagcataa 
                     agtccgccttctggcggctaaggcgcgcccaccgaccctgccgtatgag 


SPP00000038_1.0  379 YLSKDLTPAVTDNDEADKKAGQATE-GHCPRQQWALVEFEKPVTCPRLC 
                      L   +    T  D      G+        +  +A++ +E+PV       
                     -LDDGVVARYTSTDTTAGVPGRPLPVAPAEQDYYAVLLLERPVLAAPGL 
LmjF34_01_20050 4149  cggggggatatagaagggcgcctcggcggcgttggcccgccgcggcgt 
                      taagttcgacccacccgtcggctctcccaaaaacttttagcttcccgt 
                      accgtgcgcctcctcacccaatgacagaggccccgggcggtgggcttg 


SPP00000038_1.0  427 LVIGSRLDADIHTNTCRLAFHGILLH                        
                      +I  RLD +   N CR+A+ G + H                        
                     SLIAMRLDVE-RENFCRIALAGTVCH                        
LmjF34_01_20050 4293 tcagaccggg cgattcagcggagtc                        
                     cttctgtata gaatggtctcgctga                        
                     agtcgtgtgg ggcccccaaccagcc                        


//
>LmjF34_01_20050601_V5.2:subseq(1298254,8030).pep
LNVNIGLLGHVDSGKTALAKALSSTASTAAFDKSPQSQSRGITLDLGFSACEVSVEDGNE
DATQVLRAAELTKVQCTLVDCPGHASLIRTVVGGAQIIDAMVLVVDATKGIQVQTAECLV
LGEVLAKPLVVVLNKIDAIQGVSPAGKEAALAALKRKLQQVFRRTRWPTVAIVEVAAAPR
EVAGGIGHPVNTEAVLPQVLRAVDLAALKSAKESEAERPAQFYMLVDHCFAVRGQGTVFT
GTVVAGVVRVGDTVLVPELQTTRKVKGLQAFHKPVELAQGGDRVGLCVAQFDPTWMERGV
VCSAASSGRTLVSSSQLIARVHRVRYHPLPCDTHTRFHITIGHATVMGTMRYFARLPHAN
ESLDVPGTVAAFDPSIESAYVEELDDGVVARYTSTDTTAGVPGRPLPVAPAEQDYYAVLL
LERPVLAAPGLSLIAMRLDVERENFCRIALAGTVCH
//
>LmjF34_01_20050601_V5.2:subseq(1298254,8030).[3000:4367].sp
TTAAATGTGAACATTGGGCTTCTCGGTCATGTTGATAGTGGCAAGACGGCGCTGGCCAAG
GCGCTGTCGAGCACTGCCTCCACTGCTGCCTTTGATAAGAGTCCGCAGAGTCAGTCACGT
GGGATTACGCTCGACCTCGGTTTCAGTGCCTGTGAAGTGTCCGTCGAAGACGGCAACGAG
GATGCCACCCAAGTGCTGCGGGCAGCCGAGTTGACCAAGGTGCAGTGCACGCTGGTCGAC
TGCCCAGGACACGCGTCACTGATTCGCACAGTGGTTGGTGGAGCGCAGATAATTGACGCA
ATGGTGTTGGTCGTCGACGCAACCAAGGGTATCCAAGTGCAGACGGCTGAGTGTCTAGTC
CTGGGCGAGGTGCTGGCCAAGCCGCTCGTCGTTGTACTGAACAAGATAGACGCGATTCAA
GGCGTATCGCCAGCAGGTAAAGAGGCGGCATTGGCGGCCCTCAAGAGAAAACTGCAGCAG
GTGTTTCGCCGCACGCGGTGGCCCACGGTAGCCATTGTGGAGGTGGCGGCTGCCCCACGC
GAGGTGGCGGGCGGGATCGGTCACCCCGTGAACACGGAGGCGGTTTTGCCTCAGGTGCTG
CGCGCGGTCGACCTCGCGGCCCTGAAGTCTGCCAAAGAGAGCGAGGCCGAGAGGCCAGCG
CAGTTCTACATGCTTGTGGATCACTGCTTCGCCGTGCGGGGTCAGGGCACCGTATTCACC
GGGACTGTTGTCGCTGGCGTCGTTCGCGTCGGGGACACGGTGCTCGTGCCGGAGCTGCAG
ACCACGCGCAAAGTAAAAGGGCTGCAGGCGTTTCACAAGCCGGTCGAGTTGGCGCAGGGC
GGGGACCGGGTGGGGCTGTGTGTGGCTCAGTTTGACCCTACGTGGATGGAGCGCGGCGTC
GTTTGCAGCGCCGCAAGCAGTGGCCGAACGCTGGTGAGCTCCTCACAGCTGATCGCGCGG
GTGCATCGTGTGCGCTATCACCCACTGCCGTGCGACACGCACACAAGGTTTCACATCACG
ATCGGCCATGCTACCGTTATGGGGACCATGAGGTACTTTGCAAGACTGCCGCACGCGAAC
GAGAGCCTCGACGTACCCGGCACGGTAGCCGCCTTCGATCCGTCCATCGAGAGTGCATAT
GTGGAAGAGCTAGACGACGGGGTTGTGGCCAGGTACACCTCTACCGACACTACCGCAGGC
GTCCCCGGACGACCTTTGCCAGTCGCACCGGCAGAGCAGGACTACTACGCCGTGCTGCTG
CTCGAGCGGCCTGTGCTGGCGGCCCCTGGTTTGTCACTGATTGCCATGCGTCTGGATGTG
GAGCGGGAGAACTTCTGCCGCATCGCACTAGCCGGCACAGTGTGCCAC
//
LmjF34_01_20050601_V5.2:subseq(1298254,8030)	GeneWise	match	3000	4367	370.09	+	.	LmjF34_01_20050601_V5.2:subseq(1298254,8030)-genewise-prediction-1
LmjF34_01_20050601_V5.2:subseq(1298254,8030)	GeneWise	cds	3000	4367	0.00	+	0	LmjF34_01_20050601_V5.2:subseq(1298254,8030)-genewise-prediction-1
//
