CLUSTAL FORMAT for T-COFFEE Version_5.05 [http://www.tcoffee.org], CPU=1.35 sec, SCORE=57, Nseq=2, Len=1080 RNA-binding_knowlesi ---MMDNAAASLSNM-----DTADSNCNSRPFQNESNFDKTRLIIKNIPKYMNEMDLKKH hypothetical_berghei MHLDTDQVNGNVGNIPDEGYSRNDSLVKSKNYKHESMHEKTRVIIKNIPKYMNEIDLKKH *:. ..:.*: . ** :*: :::** .:***:***********:***** RNA-binding_knowlesi FFKMKGNYEFKITDIKIMKRKKIVKNKEIFESRKICFIGFINNTDCENFKKSFNNTYINT hypothetical_berghei FFKMKGKYDFKITDIKIMKRKKIIKNKESYESRKICFIGFISNIDCENFKKSFNNTYIHT ******:*:**************:**** :***********.* **************:* RNA-binding_knowlesi SKIVIEDAFSPLISKNAQQSRNATSYALKRIGDIQKM----KKDKSVKIVKSNNFVNKTI hypothetical_berghei SKIIIEDAFSPILSK------NSNTFQLNEIKQSEKTNKKDKQNNTVKVIKNDQFINKMT ***:*******::** *:.:: *:.* : :* *::::**::*.::*:** RNA-binding_knowlesi PIKKTKAGMSTTRSHMIFLDDQPVQGEVKEEEKKKKKKKKKKKEKKKIKMEGDNPSERLD hypothetical_berghei TIKKTKAGMNTTRSHVIFIDKDADLEKVNELNGAENGEKKKKKKKKKKSKNANEKSEAIN .********.*****:**:*.:. :*:* : :: :*****:*** . :.:: ** :: RNA-binding_knowlesi PAEKTRTNGAKEEVDEEGNRDDAAHADTGDDAKSNAENEEAEEEGALDWLKKISKREESE hypothetical_berghei GGENNNIN----NMDMEENK------------------LEVEEENALDWLKGISKDKEN- .*:.. * ::* * *: *.***.****** *** :*. RNA-binding_knowlesi INNHSDKNDQNDKGAQRNRLFEDEMSTASNLSSDEKEVKKKEDNGMDDENCENMNTGKII hypothetical_berghei -------GKANNKGN--PELLESDDTGNENEISSMEKVKPLYSEPEDIDDNDNINTGKLI .. *:** .*:*.: : .* *. ::** .: * :: :*:****:* RNA-binding_knowlesi IFNLPPVSEQDVKNLCERFGPVVDVKVFRNVKKGAVVLNLNEKKNNKSSDDFFIKLLKEN hypothetical_berghei IFNLPPVDEQDVKSLCERYGPVIDVYIFKNTKKGSKYICLNEKNDQKSREDFFIKLLKEN *******.*****.****:***:** :*:*.***: : ****:::** :********** RNA-binding_knowlesi HDSFANEKVKEKKKKKKKVDEDDSGVEKMNDRVIGDGEAEDWKNKNRSNKNESILNSDLT hypothetical_berghei NDNAS---SGNKKGSTKKMANSNNTKEENKN------ESENENSKN---EN-NITNIDLT :*. : :** ..**: :.:. *: :: *:*: :.** :* .* * *** RNA-binding_knowlesi NVKVYAFVNFMFPSACERAKQFLNHAIFRGKVLSVKYAKEKIGDYEYTEKEKNNVFIKLS hypothetical_berghei NVKTYAFVSFVFPSSCEKAKNNLNETIYRGKILSVKYAREKIDNSEHLEKNKNNIFIKLS ***.****.*:***:**:**: **.:*:***:******:***.: *: **:***:***** RNA-binding_knowlesi HDSKTSYKKILEIQKKRNCQNENIWNILYTDINSSIHSFCKENKCSPNSILNIKDRNIAV hypothetical_berghei NESKTSYKKILEIQKKRNCQNESIWNILYTDINSNIYNFCKETNCDPQSILNIRDKNIAV ::********************.***********.*:.****.:*.*:*****:*:**** RNA-binding_knowlesi NVSLTETYIINKMKEWIKKEGIYLEAFEQIYRKRDEGGEPSGETDGKTDGDNPPGEEPSH hypothetical_berghei NVSLTETFIINKMKEWIRKEGIALEAFEQIYKKEN---------------SKPENDENDE *******:*********:**** ********:*.: .:* .:* .. RNA-binding_knowlesi TNHVVKYKRSDDTIIVKNLSIQTNQKEVISLFKKYGVLSKVSFSPYNNIAILQFEKAENA hypothetical_berghei TDKVIKYKRSDDTIIVKNLSMHTNENDIINLFKKHGILKKISFSPYKNIAILQYEQPENA *::*:***************::**::::*.****:*:*.*:*****:******:*:.*** RNA-binding_knowlesi KKAFISNSYIRYKKLPLYLEWAPMNLFQKKENQDGDGSSNKGETKSGEIPAKEAVKKSEQ hypothetical_berghei KKALISNSYIRYKKLPLYLEWAPINLFEQN-SKNTEGTIEENEN-SNDISYQNNAKP--- ***:*******************:***::: .:: :*: ::.*. *.:*. :: .* RNA-binding_knowlesi EGAPKEEQHYSESESSDEEITHASIYVKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKA hypothetical_berghei ----------YDSESSDEEITHSSIYIKNINFNTKEEDFKKLFEKLDGFITCNIVKSKKV :**********:***:**:********:*******:************. RNA-binding_knowlesi ISKKNDEKGK-----------------EPEQKLLSQGYGFVEFKSKELALEAIKKLTATT hypothetical_berghei IKQKHKDNKKDKENDKNNDNEGTGDKTEEEHKYISLGYGFAEFKSKELAIEAIKKLTATR *.:*:.:: * * *:* :* ****.********:********* RNA-binding_knowlesi LDGHVLELSLSRNRVKKKKN--KNNEEKEVVKEKKKITKKLLVKNLAFQVTKEELRKLFS hypothetical_berghei LDGHVLELSLSHNRIKKNKQAYKNNEEKQVIKDKKKITKKLLVKNLAFQVTKEELKKLFS ***********:**:**:*: ******:*:*:**********************:**** RNA-binding_knowlesi AFGNIKSVRIPKNAYNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRHLIIDFADDFIFD hypothetical_berghei AFGNIKNVRIPKNAYNRSRGYGFVEFMSKNECLAAINALQHTHLYGRHLIIDFANDLIFD ******.**************.***********:**::****************:*:*** RNA-binding_knowlesi KNVNEFDKMKEEGVNNNNGGKKEKCITSEQAKRKATYEKEKKNQVTESKRRKVMNNMQDI hypothetical_berghei QNVDEFDKMKESQNNPNQQGK--DVITSEQAKRKVIYENEKSEKISESKKRKIIGRLENV :**:*******. * *: ** . *********. **:**.::::***:**::..::::