genewise output
Score 1722.62 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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gi|68075353|ref    1 MINVNIGVLGHVDSGKTSLCRCLSEVLSTCALDKHRQSQEKGITIDLGF 
                     MINVNIGVLGHVDSGKTSLCRCLSEVLSTCALDKHRQSQEKGITIDLGF 
                     MINVNIGVLGHVDSGKTSLCRCLSEVLSTCALDKHRQSQEKGITIDLGF 
gi|56500375|emb-6984 aaagaaggtgcggtgaaattattaggtaatgtgacacacgagaaagcgt 
                     ttatatgttgatacgacgtgggtgattgcgctaaagagaaagtctatgt 
                     gttttagaaatattgaatacgtatatgccttgtgtgataagaactttat 


gi|68075353|ref   50 SSFYIKKKKSQTATSENQHGETQNNKIIPKHGPNTNENKNKNEYIPDQN 
                     SSFYIKKKKSQTATSENQHGETQNNKIIPKHGPNTNENKNKNEYIPDQN 
                     SSFYIKKKKSQTATSENQHGETQNNKIIPKHGPNTNENKNKNEYIPDQN 
gi|56500375|emb-6837 ttttaaaaaacagaagaccggacaaaaacacgcaaagaaaaagtacgca 
                     cctataaaagacccgaaaagacaaaattcaagcacaaaaaaaaatcaaa 
                     aattaaaaacatatcatataatattaaaaataatatatatatacttcat 


gi|68075353|ref   99 NVKKEDINNDCETGNIQNINISEKNHENELIQICLVDCPGHHSLIKCIV 
                     NVKKEDINNDCETGNIQNINISEKNHENELIQICLVDCPGHHSLIKCIV 
                     NVKKEDINNDCETGNIQNINISEKNHENELIQICLVDCPGHHSLIKCIV 
gi|56500375|emb-6690 agaaggaaagtgagaacaaaatgaacgagtacattggtcgcctcaatag 
                     ataaaataaagacgataatatcaaaaaaattatgttagcgaacttagtt 
                     caaagttttttaaattatataaaaccatgaaaataatttgtttaaacaa 


gi|68075353|ref  148 MGAKIMDMIFLVIDINKGIQKQTIECLVLCQFVKSDIIIILNKIDLIPL 
                     MGAKIMDMIFLVIDINKGIQKQTIECLVLCQFVKSDIIIILNKIDLIPL 
                     MGAKIMDMIFLVIDINKGIQKQTIECLVLCQFVKSDIIIILNKIDLIPL 
gi|56500375|emb-6543 aggaaagaattgagaaagacacaagtcgttctgaagaaaacaaagtact 
                     tgcattattttttataagtaaactagtttgattagatttttaatattct 
                     ggaatgtgttatatatagaaaaaagtatacataattttttatattaata 


gi|68075353|ref  197 HERDKKINSMKKKIKDAINRTSLKKLSYYIVSLSANRKNRDDNEIDDVE 
                     HERDKKINSMKKKIKDAINRTSLKKLSYYIVSLSANRKNRDDNEIDDVE 
                     HERDKKINSMKKKIKDAINRTSLKKLSYYIVSLSANRKNRDDNEIDDVE 
gi|56500375|emb-6396 cgagaaaataaaaaaggaaaatcaattttagattgaaaacggagagggg 
                     aagaaatactaaataactagcctaatcaattgtccagaagaaaataata 
                     tagtaatttgaaatacaataataaggatcaccattcgatattcaattta 


gi|68075353|ref  246 IGKKIISMCRNSPNELNPHFNILKKEKNTRENINELVELLKSVIKIPVR 
                     IGKKIISMCRNSPNELNPHFNILKKEKNTRENINELVELLKSVIKIPVR 
                     IGKKIISMCRNSPNELNPHFNILKKEKNTRENINELVELLKSVIKIPVR 
gi|56500375|emb-6249 agaaaatataaacagcacctaataagaaaagaaagcggctaagaaacga 
                     tgaattctggagcaatacatattaaaaacgaataattattagttatctg 
                     tgaatttgtactatattttcctaaaaatagatatataaaagttaataaa 


gi|68075353|ref  295 ETNPTFEDFYFLYDHSFEIKGKGMVYTGTVIKGKITINSDISILPLNIR 
                     ETNPTFEDFYFLYDHSFEIKGKGMVYTGTVIKGKITINSDISILPLNIR 
                     ETNPTFEDFYFLYDHSFEIKGKGMVYTGTVIKGKITINSDISILPLNIR 
gi|56500375|emb-6102 gaacatggtttttgcttgaagagagtagagaagaaaaatgatatctaaa 
                     acacctaatattaaactatagagttacgcttagatctacatcttctatg 
                     aatattattttatctataaggatgataattaataaaatgttaagtataa 


gi|68075353|ref  344 GKIKDIQSFKKKQKEGTSGNRLSFLISHDNIKNLKKVERGIIVHEKSNI 
                     GKIKDIQSFKKKQKEGTSGNRLSFLISHDNIKNLKKVERGIIVHEKSNI 
                     GKIKDIQSFKKKQKEGTSGNRLSFLISHDNIKNLKKVERGIIVHEKSNI 
gi|56500375|emb-5955 gaaagacataaacaggatgaattttatcgaaaataaggagaagcgataa 
                     gataatagtaaaaaagccgagtctttcaaataataataggtttaaacat 
                     aatataattaaaaaataattaaataaatcttatgaaaaatatttaagta 


gi|68075353|ref  393 CNFAVFICKIKLIEFYKKSIKNKELLTCIIGFASSHSYGFFFKKLKTDP 
                     CNFAVFICKIKLIEFYKKSIKNKELLTCIIGFASSHSYGFFFKKLKTDP 
                     CNFAVFICKIKLIEFYKKSIKNKELLTCIIGFASSHSYGFFFKKLKTDP 
gi|56500375|emb-5808 tatggtataaatagttaaaaaaagttataagtgttcttgtttaataagc 
                     gatctttgatattataaagtaaaattcgttgtcccacagtttaatacac 
                     ctttatttaaaaaattaataataagaacattttattttttttagaaacc 


gi|68075353|ref  442 KKEQTINVQNNEHNNGQRGGETYSTCLSNNIGFDRNGNYLIIDEVEYIN 
                     KKEQTINVQNNEHNNGQRGGETYSTCLSNNIGFDRNGNYLIIDEVEYIN 
                     KKEQTINVQNNEHNNGQRGGETYSTCLSNNIGFDRNGNYLIIDEVEYIN 
gi|56500375|emb-5661 aagcaaagcaagcaagccgggattatctaaagtgaagattaaggggtaa 
                     aaaactataaaaaaagagggacaccgtcaatgtagagaatttaataata 
                     agaatttggttatttggttgaatctctatttattatatcattcggattc 


gi|68075353|ref  491 HIDDGTVSENDLFESEKEYQNNERNEEIYFLVILKKKMYGFNGEKCIFL 
                     HIDDGTVSENDLFESEKEYQNNERNEEIYFLVILKKKMYGFNGEKCIFL 
                     HIDDGTVSENDLFESEKEYQNNERNEEIYFLVILKKKMYGFNGEKCIFL 
gi|56500375|emb-5514 cagggagtgagttgagagtcaagaaggatttgataaaatgtaggatatt 
                     ataagctcaaattagaaaaaaaagaaatatttttaaatagtagaagttt 
                     tattattaactacataaatactaacaaatcatcgaaagcattaaacata 


gi|68075353|ref  540 KNDENINCRICLHGNIVDIIKDSAVNSKINNSTFVMNKKPCLNDHEDYK 
                     KNDENINCRICLHGNIVDIIKDSAVNSKINNSTFVMNKKPCLNDHEDYK 
                     KNDENINCRICLHGNIVDIIKDSAVNSKINNSTFVMNKKPCLNDHEDYK 
gi|56500375|emb-5367 aaggaaataattcgaaggaaagaggataaaatatgaaaacttagcggta 
                     aaaaataggtgtagattattaagctacataacctttaaacgtaaaaaaa 
                     attatcccaacatttaacatattaatcatttcattgcaaatatctatta 


gi|68075353|ref  589 NLKIMKEKEKIGLIEKVIDNTTLLCKNVFASSNQVTAYLTQKIYLIPLE 
                     NLKIMKEKEKIGLIEKVIDNTTLLCKNVFASSNQVTAYLTQKIYLIPLE 
                     NLKIMKEKEKIGLIEKVIDNTTLLCKNVFASSNQVTAYLTQKIYLIPLE 
gi|56500375|emb-5220 ataaaagagaagtagagagaaatttaagtgttacgagttacaatcactg 
                     atattaaaaatgttaattaaccttgaattcccaatccatcaatattcta 
                     taaagaagaataataaatttttaacatttctatacattgcaattcacaa 


gi|68075353|ref  638 HQKNKNVCKTATIGYIAKSFAKNGKFIVHFDDDISHIKDNIKLYIIMIK 
                     HQKNKNVCKTATIGYIAKSFAKNGKFIVHFDDDISHIKDNIKLYIIMIK 
                     HQKNKNVCKTATIGYIAKSFAKNGKFIVHFDDDISHIKDNIKLYIIMIK 
gi|56500375|emb-5073 ccaaaagtaagaagtagattgaagatagctgggatcaagaaattaaaaa 
                     aaaaaatgaccctgatcactcaagatttataaatcataaatatatttta 
                     taatatgcaaactctacattaataacttttttttgttgttaagcatgtg 


gi|68075353|ref  687 YYKDIFTKKKIFM                                     
                     YYKDIFTKKKIFM                                     
                     YYKDIFTKKKIFM                                     
gi|56500375|emb-4926 ttagataaaaata                                     
                     aaaattcaaattt                                     
                     tcactcaaaatcg                                     


//
>gi|56500375|emb|CAAI01002332.1|.pep
MINVNIGVLGHVDSGKTSLCRCLSEVLSTCALDKHRQSQEKGITIDLGFSSFYIKKKKSQ
TATSENQHGETQNNKIIPKHGPNTNENKNKNEYIPDQNNVKKEDINNDCETGNIQNINIS
EKNHENELIQICLVDCPGHHSLIKCIVMGAKIMDMIFLVIDINKGIQKQTIECLVLCQFV
KSDIIIILNKIDLIPLHERDKKINSMKKKIKDAINRTSLKKLSYYIVSLSANRKNRDDNE
IDDVEIGKKIISMCRNSPNELNPHFNILKKEKNTRENINELVELLKSVIKIPVRETNPTF
EDFYFLYDHSFEIKGKGMVYTGTVIKGKITINSDISILPLNIRGKIKDIQSFKKKQKEGT
SGNRLSFLISHDNIKNLKKVERGIIVHEKSNICNFAVFICKIKLIEFYKKSIKNKELLTC
IIGFASSHSYGFFFKKLKTDPKKEQTINVQNNEHNNGQRGGETYSTCLSNNIGFDRNGNY
LIIDEVEYINHIDDGTVSENDLFESEKEYQNNERNEEIYFLVILKKKMYGFNGEKCIFLK
NDENINCRICLHGNIVDIIKDSAVNSKINNSTFVMNKKPCLNDHEDYKNLKIMKEKEKIG
LIEKVIDNTTLLCKNVFASSNQVTAYLTQKIYLIPLEHQKNKNVCKTATIGYIAKSFAKN
GKFIVHFDDDISHIKDNIKLYIIMIKYYKDIFTKKKIFM
//
>gi|56500375|emb|CAAI01002332.1|.[6984:4886].sp
ATGATTAATGTTAATATAGGGGTATTAGGACATGTAGATTCTGGGAAAACAAGTTTATGC
AGGTGTTTAAGTGAAGTTTTGAGCACCTGTGCTTTGGATAAGCATAGGCAAAGTCAAGAA
AAGGGAATAACCATTGATCTTGGATTTTCATCATTTTATATAAAAAAAAAAAAAAGCCAA
ACTGCAACTAGCGAAAATCAACATGGAGAAACTCAAAATAATAAAATAATACCAAAACAT
GGACCAAATACAAATGAAAATAAAAATAAAAATGAATACATTCCTGACCAAAATAACGTA
AAAAAAGAGGATATTAATAATGATTGTGAAACAGGAAATATTCAAAATATAAATATATCA
GAAAAAAACCACGAAAATGAGTTAATACAAATATGTTTAGTAGATTGTCCTGGGCATCAT
TCTCTAATAAAATGCATAGTAATGGGGGCAAAAATTATGGATATGATTTTTTTAGTTATA
GATATAAATAAAGGGATACAAAAACAAACAATAGAGTGTCTAGTTTTATGCCAATTTGTA
AAAAGTGATATTATTATTATTCTAAATAAAATTGATTTAATACCTTTACATGAAAGGGAT
AAAAAAATTAATTCTATGAAAAAAAAAATTAAAGACGCAATAAATAGAACATCTCTAAAA
AAGTTGTCATATTACATAGTCAGCTTATCTGCTAACAGGAAAAATCGAGATGATAACGAA
ATAGATGATGTTGAAATTGGGAAAAAAATTATTTCTATGTGTAGAAACAGTCCAAATGAA
CTTAATCCTCATTTCAACATTTTAAAAAAAGAAAAAAATACAAGGGAAAATATAAATGAA
CTTGTAGAACTATTAAAGAGTGTTATAAAAATTCCAGTAAGAGAAACAAATCCAACTTTT
GAAGATTTTTATTTTTTATATGACCATTCATTTGAAATAAAGGGGAAAGGTATGGTATAT
ACAGGAACTGTTATAAAAGGTAAAATAACAATAAATTCGGATATTTCAATATTGCCTTTA
AATATAAGAGGAAAAATTAAAGATATACAAAGTTTTAAAAAAAAACAAAAAGAAGGTACA
TCAGGTAATAGATTATCATTTTTAATATCACATGACAATATTAAAAATTTGAAAAAAGTA
GAAAGAGGTATAATTGTTCATGAAAAATCGAATATATGCAATTTTGCTGTATTTATTTGT
AAAATAAAATTAATAGAATTTTATAAAAAAAGTATAAAAAATAAAGAATTGTTAACATGC
ATAATTGGTTTTGCTTCATCTCATTCTTATGGTTTTTTTTTTAAAAAGTTAAAAACAGAC
CCCAAAAAGGAACAAACTATTAATGTGCAGAATAATGAACATAATAATGGGCAGCGTGGT
GGGGAAACATATTCCACTTGCCTTTCAAATAATATTGGATTTGATAGAAATGGAAATTAC
TTAATTATTGACGAGGTGGAATATATTAACCATATAGATGATGGAACTGTTTCAGAAAAC
GATTTATTCGAAAGTGAAAAAGAATATCAAAACAATGAAAGAAACGAAGAAATATATTTC
TTAGTTATCTTGAAAAAAAAAATGTACGGATTTAATGGAGAAAAATGCATATTTTTAAAA
AATGATGAAAATATCAACTGCAGAATATGCTTACATGGTAATATAGTAGACATAATTAAA
GATAGTGCAGTAAATTCCAAAATTAATAATTCCACATTTGTTATGAACAAAAAACCATGT
TTAAATGACCATGAAGATTATAAAAATTTAAAAATAATGAAAGAAAAGGAAAAAATTGGA
TTAATTGAAAAAGTAATTGATAATACTACTTTATTATGCAAAAATGTTTTTGCCTCTTCA
AATCAAGTCACAGCTTATTTGACCCAAAAAATTTATCTCATACCCTTAGAACATCAAAAA
AATAAAAATGTGTGCAAAACAGCAACCATTGGCTATATAGCCAAATCTTTTGCAAAAAAT
GGAAAATTCATTGTTCATTTTGATGATGATATTTCGCATATTAAGGATAATATAAAATTG
TACATAATTATGATTAAGTATTACAAAGACATTTTCACAAAAAAAAAAATTTTCATG
//
gi|56500375|emb|CAAI01002332.1|	GeneWise	match	6984	4888	1722.62	-	.	gi|56500375|emb|CAAI01002332.1|-genewise-prediction-1
gi|56500375|emb|CAAI01002332.1|	GeneWise	cds	6984	4888	0.00	-	0	gi|56500375|emb|CAAI01002332.1|-genewise-prediction-1
//