
genewise output
Score 117.14 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000012_1.0   33 PQEALPGRKEQTPVAAKHHVNGNRTVEPFPEGTQMAVFGMGCFWGAERK 
                     P   LPG  +   + A  +     T     +G  +A F  GCFWG E + 
                     PYAELPGLPQSFALEAGKNALAGTTPVKSADGYAIATFAAGCFWGVELE 
scaffold_2:subs-3539 ctggccgcccttgcgggaagcggaacgaagggtgagatgggtttgggcg 
                     cacatcgtcactctacgaactcgccctagcagactcctccggtggtata 
                     cccgggcccgccccgcgacgcgcggcggcccccccggccgcccgccgcg 


SPP00000012_1.0   82 FWVLKGVYSTQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSF 
                     F  L GV +T VG+  G+   PTY+EV +  +GH E V+++Y P  +S+ 
                     FQRLPGVIATSVGYVQGHKQKPTYEEVSAATSGHTEAVQLIYDPGVISY 
scaffold_2:subs-3392 tccccggagaaggtgcgcacacatgggaggatgcagggctatgcggatt 
                     tagtcgttccgtgatagaaaaccaaatgccccgacactattaacgttca 
                     cgggccccggcgccggccggggccgggccggcccggcgggcccgcgccc 


SPP00000012_1.0  131 EELLKVFWEN--HDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKE 
                       L + FW        + ++ GND G QYRS IY T++ Q++ A  S   
                     ARLCEAFWARLGDGAVRYQQVGNDRGPQYRSGIYTTTSAQLDVARKSLV 
scaffold_2:subs-3245 gcctggttgccgggggctccggagcgcctctgataaatgccgggcatcg 
                     cgtgactgcgtgagctgaaatgaaggcaagcgtacccccatatcgactt 
                     ggccggcggccccccctcggcccccgcgcggcccggggggcccggggcc 


SPP00000012_1.0  178 NYQKVLSEHGFGPITTDIREGQTFYY-AEDYHQQYL              
                     + QK  +     PI T++   +  Y+ AE YHQ+YL              
                     DAQKKFAS----PIQTEVEPMRGVYWPAEAYHQRYL              
scaffold_2:subs-3098 ggcaatgt    cacagggcacggttcgggtccctc              
                     acaaatcc    ctacatactggtagccacaaagat              
                     cggggccg    ccgggcgcgccccgcgggccgccc              


//
>scaffold_2:subseq(3313953,6527).pep
PYAELPGLPQSFALEAGKNALAGTTPVKSADGYAIATFAAGCFWGVELEFQRLPGVIATS
VGYVQGHKQKPTYEEVSAATSGHTEAVQLIYDPGVISYARLCEAFWARLGDGAVRYQQVG
NDRGPQYRSGIYTTTSAQLDVARKSLVDAQKKFASPIQTEVEPMRGVYWPAEAYHQRYL
//
>scaffold_2:subseq(3313953,6527).[3539:3001].sp
CCCTACGCCGAGCTGCCGGGCCTCCCCCAGTCCTTCGCCCTCGAGGCCGGGAAAAACGCG
CTCGCGGGCACGACGCCCGTGAAGAGCGCCGACGGCTACGCCATCGCGACGTTCGCCGCG
GGCTGCTTCTGGGGCGTCGAGCTCGAGTTCCAGCGGCTGCCCGGCGTCATCGCGACGAGC
GTGGGCTACGTGCAGGGCCACAAGCAGAAGCCGACCTACGAGGAGGTGAGCGCCGCGACG
TCCGGCCACACGGAGGCCGTGCAGTTGATCTACGACCCGGGCGTGATCTCCTACGCGCGG
CTCTGCGAGGCGTTCTGGGCGCGCCTCGGCGACGGCGCCGTCCGTTACCAGCAGGTCGGC
AACGACCGCGGGCCCCAGTACCGGTCGGGCATCTACACGACGACGTCGGCGCAGCTCGAC
GTCGCGCGGAAGTCGCTCGTCGACGCGCAGAAGAAGTTCGCCTCGCCCATCCAGACGGAG
GTCGAGCCCATGCGCGGCGTCTACTGGCCCGCGGAGGCGTACCACCAGCGCTACCTC
//
scaffold_2:subseq(3313953,6527)	GeneWise	match	3539	3003	121.13	-	.	scaffold_2:subseq(3313953,6527)-genewise-prediction-1
scaffold_2:subseq(3313953,6527)	GeneWise	cds	3539	3003	0.00	-	0	scaffold_2:subseq(3313953,6527)-genewise-prediction-1
//
