
genewise output
Score 52.79 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000092_1.0    5 FNIGLLGHVDSGKTTLAKALSSISSTAAFDKNPQSVERGITLDLGFSGL 
                     +NIG +GHV  GK+T+ KA+S +  T  F KN   +ER IT+ LG++   
                     INIGTIGHVAHGKSTVVKAISGVQ-TVRF-KN--ELERNITIKLGYANA 
scaffold_5:subs-3752 aaagaagcggcgataggagatggc agct aa  gcgcaaaaacgtgag 
                     tatgctgatcagaccttactcgta ctgt aa  atagatctatgacac 
                     cccgccccccccgggccgcccccg cgcc gc  gcgcccccgcccgcg 


SPP00000092_1.0   54 LV-------------------------DAPAHLPQGEQLQFTFVDCPGH 
                      +                         D    +        +FVDCPGH 
                     KIYKRVDEQPGPGNFRSFGSSKPDAFTDPATKIAWKLVRHVSFVDCPGH 
scaffold_5:subs-3617 aatacgggccgcgatcttgttacggtagcgaaagtacgccgttggtcgc 
                     ataagtaaacgcgatgctgccacactcacccatcgattgatcttagcga 
                     gccgcccggggccccgcccgcgccccgccgggccggcgccccccccccc 


SPP00000092_1.0   78 ASLIRTIIGGAQIIDLMLLVVDAQKG-KQTQTAECLIIGELLQ-KKLIV 
                       L+ T++ GA ++D  LL+V   +   Q QT+E L   E+++   +I+ 
                     DILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENIII 
scaffold_5:subs-3470 gacagaacaggggagggcccgggagctccccatgccggggaaccgaaaa 
                     atttccttagccttaccttttcgaacgcacaccaatcctattgtaattt 
                     cccggggcccgccgcggccccgccgcccgcggggcccccgcgccgcccc 


SPP00000092_1.0  125 VINKIDVYPENQRASKLEKLRLRLAKTLEATTFGGQVPICAVSALQGTH 
                     + NK+D+   +   ++ E++     K   A T     PI  +SA+   + 
                     LQNKVDLVKPDAALAQHEQI-----KKFVAGTVADAAPIIPISAVLKYN 
scaffold_5:subs-3323 ccaaggcgacgggcgccgca     aatgggagggggcaacatggcata 
                     taaatattacacctcaaaat     aattcgctcacccttctccttaaa 
                     cgcgccccgccggcggcggc     ggccgccccccgcccccccgcgcc 


SPP00000092_1.0  174 IAELREVLREAYFQPQRNLADPLFMYVDHCFGIKG--------QGTVCT 
                     +  + E L  A   P R+ A    + V   F +           G V   
                     VDAVCEYLAHAIPTPARDFASLPRLIVIRSFDVNKPGEDVEHLKGGVAG 
scaffold_5:subs-3191 ggggtgtcgcgacacgcgtgtccccagacttggaacgggggccaggggg 
                     tactgaatcactccccgatcctcgttttgctataacgaataataggtcg 
                     cccccgcgccccggcgcccgggggccccgcccgcgccgcggccgccccc 


SPP00000092_1.0  215 GTLLQGKVQVNNVIEL                                  
                     G++LQG +++ + +E+                                  
                     GSILQGVLKMGDEVEV                                  
scaffold_5:subs-3044 gtaccggcaagggggg                                  
                     gcttagttatgaatat                                  
                     ccccgcccggccgcgg                                  


//
>scaffold_5:subseq(2926564,6752).pep
INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKRVDEQPGPGNF
RSFGSSKPDAFTDPATKIAWKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEP
CPQPQTSEHLAAVEIMRLENIIILQNKVDLVKPDAALAQHEQIKKFVAGTVADAAPIIPI
SAVLKYNVDAVCEYLAHAIPTPARDFASLPRLIVIRSFDVNKPGEDVEHLKGGVAGGSIL
QGVLKMGDEVEV
//
>scaffold_5:subseq(2926564,6752).[3752:2995].sp
ATCAACATCGGGACCATCGGCCACGTCGCCCACGGCAAGTCGACGGTCGTCAAGGCCATC
TCCGGCGTCCAGACCGTGCGCTTCAAGAACGAGCTCGAGCGCAACATCACCATCAAGCTC
GGCTACGCGAACGCGAAGATCTACAAGCGCGTCGACGAGCAGCCGGGGCCCGGCAACTTC
CGGTCCTTCGGCTCGTCCAAGCCCGACGCCTTCACGGACCCCGCGACGAAGATCGCCTGG
AAGCTCGTGCGCCACGTCTCCTTCGTCGACTGCCCCGGCCACGACATCCTCATGGCGACG
ATGCTCAACGGCGCGGCCGTCATGGACGCGGCGCTCCTCCTCGTCGCGGGCAACGAGCCC
TGCCCCCAGCCCCAGACGTCGGAGCACCTCGCCGCCGTCGAGATCATGCGCCTCGAGAAC
ATCATCATCCTCCAGAACAAGGTCGACCTCGTCAAGCCCGACGCGGCGCTCGCGCAGCAC
GAGCAGATCAAGAAGTTCGTCGCGGGCACCGTCGCCGACGCCGCGCCCATCATCCCCATC
TCCGCCGTGCTCAAGTACAACGTCGACGCCGTCTGCGAGTACCTGGCCCACGCCATCCCG
ACGCCCGCGCGCGACTTCGCGTCGCTGCCGCGGCTCATCGTCATCCGGTCCTTCGACGTG
AACAAGCCCGGCGAGGACGTGGAGCACCTCAAGGGCGGCGTCGCCGGCGGCTCCATCCTC
CAGGGCGTCCTCAAGATGGGCGACGAGGTCGAGGTG
//
scaffold_5:subseq(2926564,6752)	GeneWise	match	3752	2997	88.73	-	.	scaffold_5:subseq(2926564,6752)-genewise-prediction-1
scaffold_5:subseq(2926564,6752)	GeneWise	cds	3752	2997	0.00	-	0	scaffold_5:subseq(2926564,6752)-genewise-prediction-1
//
