
genewise output
Score 529.57 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000034_1.0   11 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTC 
                     +DYD++++GGGSGGLA +KE A+ G KV VLDFV P+P G+ WGLGGTC 
                     FDYDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTC 
scaffold_11:sub-4436 tgtggggggggtggcgttagtgacggagggcgtgactcggtatgcggat 
                     taaattttgggcggtcgcaagcatgcatcttattaccccgccggtggcg 
                     ccccccccccccccccccggcggcccgccgcccggggggggggccccgc 


SPP00000034_1.0   60 VNVGCIPKKLMHQAALLGQALQD-SRNYGWKVEETVKHDWDRMIEAVQN 
                     VNVGCIPKKLMH A+++G+ L+D    +GWK      HDW+ M   VQ+ 
                     VNVGCIPKKLMHTASIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQD 
scaffold_11:sub-4289 gaggtacaacacagtaaggacagggggtgtaggggggcgtgtaatagcg 
                     tatggtcaattacccttgactaaaccctggaacccgcaagactacctaa 
                     ccccccgggcgcggccccggcgccccccgggcccgcgccgggggggggc 


SPP00000034_1.0  108 HIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAER 
                     HI SLN+ YRVALRE  + Y N  G+F   + I  T+ KG +   +A R 
                     HIKSLNFKYRVALREAGITYLNRLGEFEDKNTISLTDKKGNKTSVTAAR 
scaffold_11:sub-4142 caatcatatcggccgggaatcaccggtggaaaatcagaagaaatgaggc 
                     atactataagtctgacgtcatagtgataaaactctcaaagaacctcccg 
                     ccggcccgcccgccggccccgccccgcgcgcccccgcggccggccgcgg 


SPP00000034_1.0  157 FLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALEC 
                     F++A G RP  LG PG  E+ I SDDLFSLP  PG+ L VG  Y+ALEC 
                     FIVAVGGRPNKLGCPGG-EHAIDSDDLFSLPKAPGRVLCVGGGYIALEC 
scaffold_11:sub-3995 tagggggccaacgtcgg gcgagaggcttccagcgcgctggggtagcgt 
                     tttctgggcaatggcgg aactagaattctcaccggttgtgggatctag 
                     ccccccccgcgcccccc gcccccccgccgcgggccgccccccccgcgc 


SPP00000034_1.0  206 AGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPI 
                      GF AG+G   T MVRSILLRGFD++   KI  H++ HG+++     P  
                     GGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGVQLQVGVTPA 
scaffold_11:sub-3851 ggtaggagtcaatagctacccgtgcgtggaaggcaaccggcccgggacg 
                     ggtccgtgacccgttgctttggtagagtgatacataaagtatatgtccc 
                     cccgccgccgggcgcgcccccccccgcccgcgcccgccccgcgcccgcg 


SPP00000034_1.0  255 KVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLE 
                     K+E+  A T G L V    T+S   +  EY+TV++A GR A T  +G++ 
                     KIEK-DAAT-GVLTV----TDSGGGVH-EYDTVLVATGRYADTAALGID 
scaffold_11:sub-3704 aaga ggga ggcag    agtggggc gtgagcggagctggaggcgag 
                     ataa accc gttct    cacgggta aaactttccggacaccctgta 
                     gcgg cggg cccgc    gccccccc gccggccggcccgcggccccc 


SPP00000034_1.0  304 TV---GVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQA 
                      V      +N KT K+   DE+    P++YAIGD++E + ELTPVAI+A 
                     NVPGASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEA 
scaffold_11:sub-3578 agcggtgagagaaaacgtgggcccggccgtgaggggggccgcacggagg 
                     atcgcccatacacaatagtaaatcgccatactgattaggcatcctctac 
                     cgccgggcgcgggggcgcccgggccggcccgcccccgcgcgcgccccgg 


SPP00000034_1.0  350 GRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEEN 
                     G  LA+RL+ G T   DYE V TT+FTPLEYG  GLSE+ A  ++GE N 
                     GLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKAQLGECN 
scaffold_11:sub-3431 gcccgccctggaagcagtgtggaaataccgtgaagcaggggagccggta 
                     gtgtcggttggacactaaagtcccttcctaagctgtgaaacacatgaga 
                     cgccggcccccgcgcgccgccgggccggcgccgcggcgcccgcgccgcc 


SPP00000034_1.0  399 IEVYHSYFWPLEWTIP---SRDNNKCYAKIICNTKDNERVVGFHVLGPN 
                     +E Y S F PLE+ +    S   + C+AK++ + K   +VVGFH LGPN 
                     VESYISEFAPLEYALSETRSERGDGCFAKLVVD-KSTGKVVGFHYLGPN 
scaffold_11:sub-3284 ggttaagtgccgtgcagacagcgggttgacggg aaagagggtctcgca 
                     tacatgatcctaactgacggaggaggtcattta agcgattgtaatgca 
                     cgccccgcgccgccccggccgcccccccgcccc gcgcgcccccccccc 


SPP00000034_1.0  445 AGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASIL 
                     AGE+TQGF+ A++ G T     ST+GIHP  AE FT+++VTK SG S   
                     AGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSMTVTKSSGESAA 
scaffold_11:sub-3140 gggaacgttagacaggatggtataggaccaggggtataagaataggtgg 
                     cgatcagtctctgagccacattcctgtacctcaatcctctcacggaccc 
                     ccgccgcccccgcgcgccccccccccccggccggcgcgcgcggccgcac 


SPP00000034_1.0  494 QAGC                                              
                     + GC                                              
                     KGGC                                              
scaffold_11:sub-2993 aggt                                              
                     aggg                                              
                     gccc                                              


//
>scaffold_11:subseq(783554,7436).pep
FDYDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGLGGTCVNVGCIPKKLM
HTASIIGETLKDDAAAFGWKDAAAGAHDWESMKSTVQDHIKSLNFKYRVALREAGITYLN
RLGEFEDKNTISLTDKKGNKTSVTAARFIVAVGGRPNKLGCPGGEHAIDSDDLFSLPKAP
GRVLCVGGGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIKHHGVQLQVG
VTPAKIEKDAATGVLTVTDSGGGVHEYDTVLVATGRYADTAALGIDNVPGASANVNAKTK
KLECVDEQLPGAPHVYAIGDVVEGRPELTPVAIEAGLRLARRLFGGKTEPMDYECVATTI
FTPLEYGTIGLSEDDAKAQLGECNVESYISEFAPLEYALSETRSERGDGCFAKLVVDKST
GKVVGFHYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSMTVTKSSGESA
AKGGC
//
>scaffold_11:subseq(783554,7436).[4436:2980].sp
TTCGACTACGACGTCGTCGTCGTCGGCGGCGGCTCCGGCGGCCTCGCCTGCTCCAAGGAG
TGCGCGAAGCTCGGCGCCAAGGTCGCCGTGCTCGACTTCGTGAAGCCGTCGCCGGCGGGG
TCGACGTGGGGCCTCGGCGGCACGTGCGTCAACGTCGGCTGCATCCCGAAGAAGCTCATG
CACACGGCGTCCATCATCGGCGAGACGCTCAAGGACGACGCCGCCGCCTTCGGGTGGAAG
GACGCCGCCGCGGGCGCGCACGACTGGGAGTCGATGAAGTCGACGGTGCAGGACCACATC
AAGTCGCTCAACTTCAAGTACCGCGTCGCGCTCCGCGAGGCGGGCATCACCTACCTGAAC
CGCCTCGGCGAGTTCGAGGACAAGAACACCATCTCCCTCACGGACAAGAAGGGCAACAAG
ACGTCCGTCACGGCCGCGCGGTTCATCGTCGCCGTCGGCGGCCGCCCGAACAAGCTCGGC
TGCCCCGGCGGCGAGCACGCCATCGACAGCGACGACCTGTTCTCCCTGCCCAAGGCGCCG
GGCCGCGTGCTCTGCGTCGGCGGCGGCTACATCGCGCTCGAGTGCGGCGGCTTCACGGCC
GGCATGGGCTACCCGACGACGTGCATGGTCCGGTCCATCCTCCTCCGCGGCTTCGACCGC
GAGTGCGTCGGCAAGATCGAGGCCCACATCAAGCACCACGGCGTCCAGCTCCAGGTCGGC
GTCACGCCCGCGAAGATCGAGAAGGACGCGGCGACGGGCGTCCTCACGGTCACGGACTCC
GGCGGCGGCGTCCACGAGTACGACACGGTGCTCGTCGCGACGGGCCGCTACGCGGACACG
GCGGCCCTCGGCATCGACAACGTGCCCGGCGCGTCGGCGAACGTGAACGCGAAGACGAAG
AAGCTCGAGTGCGTCGACGAGCAGCTGCCCGGCGCGCCGCACGTCTACGCGATCGGCGAC
GTCGTCGAGGGCCGGCCCGAGCTCACGCCCGTCGCCATCGAGGCGGGCCTGCGCCTCGCG
CGGCGCCTCTTCGGCGGCAAGACCGAGCCCATGGACTACGAGTGCGTCGCGACGACGATC
TTCACGCCGCTCGAGTACGGCACGATCGGGCTGAGCGAGGACGACGCCAAGGCCCAGCTC
GGCGAGTGCAACGTCGAGTCCTACATCAGCGAGTTCGCGCCCCTCGAGTACGCCCTCAGC
GAGACGCGCAGCGAGCGCGGCGACGGCTGCTTCGCCAAGCTCGTCGTCGACAAGAGCACG
GGCAAGGTCGTCGGCTTCCACTACCTCGGCCCCAACGCCGGCGAGATCACCCAGGGCTTC
TCCATCGCCATGCGCAAGGGCGCGACCTACGCCGACTTCATCTCCACCGTCGGCATCCAC
CCGACGGTCGCCGAGGAGTTCACGTCCATGACCGTGACCAAGTCGAGCGGCGAGTCCGCA
GCCAAGGGCGGCTGC
//
scaffold_11:subseq(783554,7436)	GeneWise	match	4436	2982	536.56	-	.	scaffold_11:subseq(783554,7436)-genewise-prediction-1
scaffold_11:subseq(783554,7436)	GeneWise	cds	4436	2982	0.00	-	0	scaffold_11:subseq(783554,7436)-genewise-prediction-1
//
