Command line: [exonerate -m p2g --showtargetgff -q Gpx.fa -t GPx_scaffold34_extraccio.fa]
Hostname: [localhost]

C4 Alignment:
------------
         Query: SPP00000065_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Pan troglodytes # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 120
   Query range: 24 -> 90
  Target range: 3455 -> 3257

   25 : GlyGluProValSerLeuGlySerLeuArgGlyLysValLeuLeuIleGluAsnValAlaSe :   45
        |||! !  !||| !!!!!..!:!!!!!||||||:!!|||:!!! !:!!  !|||:!!|||||
        GlyAlaGluValArgPheSerAlaPheArgGlyGlnValValCysValThrAsnLeuAlaSe
 3455 : GGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTC : 3395

   46 : rLeuUnkGlyThrThrValArgAspTyrThrGlnMetAsnGluLeuGlnArgArgLeuGlyP :   66
        |  !   |||! !|||  !!!! !!|||! !   :!:   :!!|||     !!:!!!!..! 
        rArg***GlyLysThrAsnSerHisTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerG
 3394 : GAGATGAGGCAAGACGAACAGCCACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGG : 3332

   67 : roArgGlyLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGlnGluAsnAlaLys :   86
         !|||||||||!.!:!!:!!|||||||||||||||||||||  !  !||||||   !.!   
        lyArgGlyLeuAlaIleValGlyPheProCysAsnGlnPheMetGlyGlnGluProGlyAla
 3331 : GCCGCGGCCTCGCGATCGTCGGCTTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCC : 3272

   87 : AsnGluGluIle :   90
        .!...!||||||
        GluSerGluIle
 3271 : GAATCGGAGATC : 3258

vulgar: SPP00000065_1.0 24 90 . scaffold_34:subseq(208736,6503) 3455 3257 - 120 M 66 198
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3455	120	-	.	gene_id 1 ; sequence SPP00000065_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3455	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3455	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3455	120	-	.	alignment_id 1 ; Query SPP00000065_1.0 ; Align 3456 25 198
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000004_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Homo sapiens # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 120
   Query range: 26 -> 92
  Target range: 3455 -> 3257

   27 : GlyGluProValSerLeuGlySerLeuArgGlyLysValLeuLeuIleGluAsnValAlaSe :   47
        |||! !  !||| !!!!!..!:!!!!!||||||:!!|||:!!! !:!!  !|||:!!|||||
        GlyAlaGluValArgPheSerAlaPheArgGlyGlnValValCysValThrAsnLeuAlaSe
 3455 : GGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTC : 3395

   48 : rLeuUnkGlyThrThrValArgAspTyrThrGlnMetAsnGluLeuGlnArgArgLeuGlyP :   68
        |  !   |||! !|||  !!!! !!|||! !   :!:   :!!|||     !!:!!!!..! 
        rArg***GlyLysThrAsnSerHisTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerG
 3394 : GAGATGAGGCAAGACGAACAGCCACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGG : 3332

   69 : roArgGlyLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGlnGluAsnAlaLys :   88
         !|||||||||!.!:!!:!!|||||||||||||||||||||  !  !||||||   !.!   
        lyArgGlyLeuAlaIleValGlyPheProCysAsnGlnPheMetGlyGlnGluProGlyAla
 3331 : GCCGCGGCCTCGCGATCGTCGGCTTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCC : 3272

   89 : AsnGluGluIle :   92
        .!...!||||||
        GluSerGluIle
 3271 : GAATCGGAGATC : 3258

vulgar: SPP00000004_1.0 26 92 . scaffold_34:subseq(208736,6503) 3455 3257 - 120 M 66 198
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3455	120	-	.	gene_id 1 ; sequence SPP00000004_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3455	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3455	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3455	120	-	.	alignment_id 1 ; Query SPP00000004_1.0 ; Align 3456 27 198
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000101_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Mus musculus # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 187
   Query range: 39 -> 120
  Target range: 3488 -> 3245

   40 : SerMetHisGluPheSerAlaLysAspIleAspGlyHisMetValCysLeuAspLysTyrAr :   60
        .!!.!.|||!!:.!!! !::!:!!||||||||||||     !||| !!!!!...   !:!||
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   61 : gGlyPheValCysIleValThrAsnValAlaSerGlnUnkGlyLysThrAspValAsnTyrT :   81
        ||||   |||  !  !|||||||||:!!||||||::!   |||||||||:!!  !:!!|||!
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   82 : hrGlnLeuValAspLeuHisAlaArgTyrAlaGluCysGlyLeuArgIleLeuAlaPhePro :  101
         !   |||!.! ! |||  !|||!:!!:!:!!!   !!||||||  !|||:!!!.!||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

  102 : CysAsnGlnPheGlyArgGlnGluProGlySerAsnGlnGluIleLysGluPheAla :  120
        ||||||||||||  ! !!||||||||||||:!!.!...!|||||||||!  ||||||
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAla
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCG : 3246

vulgar: SPP00000101_1.0 39 120 . scaffold_34:subseq(208736,6503) 3488 3245 - 187 M 81 243
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3246	3488	187	-	.	gene_id 1 ; sequence SPP00000101_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3246	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3246	3488	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3246	3488	187	-	.	alignment_id 1 ; Query SPP00000101_1.0 ; Align 3489 40 243
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000068_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Pan troglodytes # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 189
   Query range: 39 -> 120
  Target range: 3488 -> 3245

   40 : SerMetHisGluPheSerAlaLysAspIleAspGlyHisMetValAsnLeuAspLysTyrAr :   60
        .!!.!.|||!!:.!!! !::!:!!||||||||||||     !|||..!!!!...   !:!||
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   61 : gGlyPheValCysIleValThrAsnValAlaSerGlnUnkGlyLysThrGluValAsnTyrT :   81
        ||||   |||  !  !|||||||||:!!||||||::!   |||||||||.!.  !:!!|||!
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   82 : hrGlnLeuValAspLeuHisAlaArgTyrAlaGluCysGlyLeuArgIleLeuAlaPhePro :  101
         !   |||!.! ! |||  !|||!:!!:!:!!!   !!||||||  !|||:!!!.!||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

  102 : CysAsnGlnPheGlyLysGlnGluProGlySerAsnGluGluIleLysGluPheAla :  120
        ||||||||||||  !   ||||||||||||:!!.!...!|||||||||!  ||||||
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAla
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCG : 3246

vulgar: SPP00000068_1.0 39 120 . scaffold_34:subseq(208736,6503) 3488 3245 - 189 M 81 243
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3246	3488	189	-	.	gene_id 1 ; sequence SPP00000068_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3246	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3246	3488	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3246	3488	189	-	.	alignment_id 1 ; Query SPP00000068_1.0 ; Align 3489 40 243
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000007_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Homo sapiens # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 189
   Query range: 39 -> 120
  Target range: 3488 -> 3245

   40 : SerMetHisGluPheSerAlaLysAspIleAspGlyHisMetValAsnLeuAspLysTyrAr :   60
        .!!.!.|||!!:.!!! !::!:!!||||||||||||     !|||..!!!!...   !:!||
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   61 : gGlyPheValCysIleValThrAsnValAlaSerGlnUnkGlyLysThrGluValAsnTyrT :   81
        ||||   |||  !  !|||||||||:!!||||||::!   |||||||||.!.  !:!!|||!
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   82 : hrGlnLeuValAspLeuHisAlaArgTyrAlaGluCysGlyLeuArgIleLeuAlaPhePro :  101
         !   |||!.! ! |||  !|||!:!!:!:!!!   !!||||||  !|||:!!!.!||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

  102 : CysAsnGlnPheGlyLysGlnGluProGlySerAsnGluGluIleLysGluPheAla :  120
        ||||||||||||  !   ||||||||||||:!!.!...!|||||||||!  ||||||
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAla
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCG : 3246

vulgar: SPP00000007_1.0 39 120 . scaffold_34:subseq(208736,6503) 3488 3245 - 189 M 81 243
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3246	3488	189	-	.	gene_id 1 ; sequence SPP00000007_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3246	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3246	3488	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3246	3488	189	-	.	alignment_id 1 ; Query SPP00000007_1.0 ; Align 3489 40 243
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000095_1.0 # Protein # Glutathione peroxidase 3 (GPx3) # Saccharomyces cerevisiae # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 144
   Query range: 3 -> 83
  Target range: 3485 -> 3242

    4 : PheTyrLysLeuAlaProValAspLysLysGlyGlnProPheProPheAspGlnLeuLysGl :   24
        |||:!! ! |||  !  !! !|||!   ! |||  !  ! ! ! !|||...   !!!:::||
        PheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheArgGl
 3485 : TTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGG : 3425

   25 : yLysValValLeuIleValAsnValAlaSerLysCysGlyPheThr<->ProGlnTyrLysG :   44
        |:!!||||||! !:!!..!|||:!!||||||!:!!! |||   |||     !!!.||||||!
        yGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrLysG
 3424 : CCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACAAGG : 3362

   45 : luLeuGluAlaLeuTyrLysArgTyrLysAspGluGlyPheThrIleIleGlyPheProCys :   64
          |||! !  !|||  !  !!:!!:!..!! !...|||.!!.!!|||:!!||||||||||||
        lyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPheProCys
 3361 : GCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCGTGC : 3302

   65 : AsnGlnPheGlyHisGlnGluProGlySerAspGluGluIleAlaGlnPheCysGln :   83
        |||||||||  !  !||||||||||||:!!!!:..!||||||  !   |||...!:!
        AsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAlaArg
 3301 : AACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCGCGG : 3243

vulgar: SPP00000095_1.0 3 83 . scaffold_34:subseq(208736,6503) 3485 3242 - 144 M 36 108 G 0 3 M 44 132
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3485	144	-	.	gene_id 1 ; sequence SPP00000095_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3485	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3485	.	-	.	insertions 3 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3485	144	-	.	alignment_id 1 ; Query SPP00000095_1.0 ; Align 3486 4 108 ; Align 3375 40 132
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000094_1.0 # Protein # Glutathione peroxidase 2 (GPx2) # Saccharomyces cerevisiae # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 157
   Query range: 3 -> 84
  Target range: 3488 -> 3242

    4 : SerPheTyrAspLeuGluCysLysAspLysLysGlyGluSerPheLysPheAspGlnLeuLy :   24
        .!!|||:!!||||||  ! !!:!!|||!   ! |||! !..! ! :::|||...   !!!::
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   25 : sGlyLysValValLeuIleValAsnValAlaSerLysCysGlyPheThr<->ProGlnTyrL :   44
        :|||:!!||||||! !:!!..!|||:!!||||||!:!!! |||   |||     !!!.||||
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   45 : ysGluLeuGluGluLeuTyrLysLysTyrGlnAspLysGlyPheValIleLeuGlyPhePro :   64
        ||!  |||! !:!!|||  !  !:!!!:!..!! !:::|||.!!!.!|||:!!|||||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

   65 : CysAsnGlnPheGlyLysGlnGluProGlySerAspGluGlnIleThrGluPheCysGln :   84
        ||||||||||||  !   ||||||||||||:!!!!:..!:!!|||! !!  |||...!:!
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAlaArg
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCGCGG : 3243

vulgar: SPP00000094_1.0 3 84 . scaffold_34:subseq(208736,6503) 3488 3242 - 157 M 37 111 G 0 3 M 44 132
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3488	157	-	.	gene_id 1 ; sequence SPP00000094_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3488	.	-	.	insertions 3 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3488	157	-	.	alignment_id 1 ; Query SPP00000094_1.0 ; Align 3489 4 111 ; Align 3375 41 132
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000067_1.0 # Protein # Glutathione peroxidase 3 (GPx3) # Pan troglodytes # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 111
   Query range: 37 -> 115
  Target range: 3491 -> 3257

   38 : GlyThrIleTyrGluTyrGlyAlaLeuThrIleAspGlyGluGluTyrIleProPheLysGl :   58
        |||  !.!!:!!!!:  !  !::!  !  !|||||||||! !|||   :!:! !|||..!  
        GlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGlu---ValArgPheSerAl
 3491 : GGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAG---GTGCGCTTCTCGGC : 3434

   59 : nTyrAlaGlyLysTyrValLeuPheValAsnValAlaSerTyrUnkGlyLeuThr<->GlyG :   78
         !:!  !|||:!!  !|||! ! !!..!|||:!!||||||      |||  !|||   .!!!
        aPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerH
 3433 : CTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCC : 3371

   79 : lnTyrIleGluLeuAsnAlaLeuGlnGluGluLeuAlaProPheGlyLeuValIleLeuGly :   98
        !.|||!  !  |||     !|||   ! !:!!!!!:!!  !  !||||||!.!|||:!!|||
        isTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGly
 3370 : ACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGC : 3311

   99 : PheProCysAsnGlnPheGlyLysGlnGluProGlyGluAsnSerGluIle :  115
        ||||||||||||||||||  !   ||||||||||||!  .!.|||||||||
        PheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIle
 3310 : TTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATC : 3258

vulgar: SPP00000067_1.0 37 115 . scaffold_34:subseq(208736,6503) 3491 3257 - 111 M 15 45 G 1 0 M 23 69 G 0 3 M 39 117
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3491	111	-	.	gene_id 1 ; sequence SPP00000067_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3491	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3491	.	-	.	insertions 3 ; deletions 1
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3491	111	-	.	alignment_id 1 ; Query SPP00000067_1.0 ; Align 3492 38 45 ; Align 3447 54 69 ; Align 3375 77 117
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000006_1.0 # Protein # Glutathione peroxidase 3 (GPx3) # Homo sapiens # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 111
   Query range: 37 -> 115
  Target range: 3491 -> 3257

   38 : GlyThrIleTyrGluTyrGlyAlaLeuThrIleAspGlyGluGluTyrIleProPheLysGl :   58
        |||  !.!!:!!!!:  !  !::!  !  !|||||||||! !|||   :!:! !|||..!  
        GlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGlu---ValArgPheSerAl
 3491 : GGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAG---GTGCGCTTCTCGGC : 3434

   59 : nTyrAlaGlyLysTyrValLeuPheValAsnValAlaSerTyrUnkGlyLeuThr<->GlyG :   78
         !:!  !|||:!!  !|||! ! !!..!|||:!!||||||      |||  !|||   .!!!
        aPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerH
 3433 : CTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCC : 3371

   79 : lnTyrIleGluLeuAsnAlaLeuGlnGluGluLeuAlaProPheGlyLeuValIleLeuGly :   98
        !.|||!  !  |||     !|||   ! !:!!!!!:!!  !  !||||||!.!|||:!!|||
        isTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGly
 3370 : ACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGC : 3311

   99 : PheProCysAsnGlnPheGlyLysGlnGluProGlyGluAsnSerGluIle :  115
        ||||||||||||||||||  !   ||||||||||||!  .!.|||||||||
        PheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIle
 3310 : TTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATC : 3258

vulgar: SPP00000006_1.0 37 115 . scaffold_34:subseq(208736,6503) 3491 3257 - 111 M 15 45 G 1 0 M 23 69 G 0 3 M 39 117
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3491	111	-	.	gene_id 1 ; sequence SPP00000006_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3491	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3491	.	-	.	insertions 3 ; deletions 1
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3491	111	-	.	alignment_id 1 ; Query SPP00000006_1.0 ; Align 3492 38 45 ; Align 3447 54 69 ; Align 3375 77 117
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000103_1.0 # Protein # Glutathione peroxidase 6 (GPx6) # Mus musculus # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 103
   Query range: 36 -> 115
  Target range: 3494 -> 3257

   37 : ThrGlyThrValTyrGluTyrGlyAlaAsnThrIleAspGlyGlyGluPheValAsnPheGl :   57
        ..!|||  ! !!:!!!!:  !  !::!.!.  !|||||||||!.!|||   |||..!|||..
        ValGlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGlu---ValArgPheSe
 3494 : GTCGGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAG---GTGCGCTTCTC : 3437

   58 : nGlnTyrAlaGlyLysHisIleLeuPheValAsnValAlaSerPheCysGlyLeuThr<->A :   77
        !   !:!  !|||:!!  !:!!! ! !!..!|||:!!||||||   !! |||  !|||   :
        rAlaPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnS
 3436 : GGCCTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACA : 3374

   78 : laThrTyrProGluLeuAsnThrLeuGlnGluGluLeuLysProPheAsnValThrValLeu :   97
        :!  !|||  !!  |||   ! !|||   ! !:!!!!!..!  !  !..!:!!.!!:!!:!!
        erHisTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleVal
 3373 : GCCACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTC : 3314

   98 : GlyPheProCysAsnGlnPheGlyLysGlnGluProGlyLysAsnSerGluIle :  115
        |||||||||||||||||||||  !   ||||||||||||   .!.|||||||||
        GlyPheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIle
 3313 : GGCTTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATC : 3258

vulgar: SPP00000103_1.0 36 115 . scaffold_34:subseq(208736,6503) 3494 3257 - 103 M 16 48 G 1 0 M 23 69 G 0 3 M 39 117
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3494	103	-	.	gene_id 1 ; sequence SPP00000103_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3494	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3494	.	-	.	insertions 3 ; deletions 1
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3494	103	-	.	alignment_id 1 ; Query SPP00000103_1.0 ; Align 3495 37 48 ; Align 3447 54 69 ; Align 3375 77 117
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000099_1.0 # Protein # Glutathione peroxidase 2 (GPx2) # Mus musculus # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 139
   Query range: 6 -> 82
  Target range: 3488 -> 3257

    7 : SerPheTyrAspLeuSerAlaValGlyLeuAspGlyGluLysIleAspPheAsnThrPheAr :   27
        .!!|||:!!||||||! !::!! !! !:!!||||||! !:!!:!:  !|||:::.!!|||||
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   28 : gGlyArgAlaValLeuIleGluAsnValAlaSerLeuUnkGlyThrThrThrArgAspTyrA :   48
        ||||!:!!.!|||! !:!!  !|||:!!||||||  !   |||! !|||!.!!!! !!|||!
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   49 : snGlnLeuAsnGluLeuGlnCysArgPhePro<->ArgArgLeuValValLeuGlyPhePro :   67
        !.   |||   :!!|||   ...!:!||| !!   ||| !!|||!.!:!!:!!|||||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

   68 : CysAsnGlnPheGlyHisGlnGluAsnCysGlnAsnGluGluIle :   82
        ||||||||||||  !  !||||||    !!   .!...!||||||
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIle
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATC : 3258

vulgar: SPP00000099_1.0 6 82 . scaffold_34:subseq(208736,6503) 3488 3257 - 139 M 52 156 G 0 3 M 24 72
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3488	139	-	.	gene_id 1 ; sequence SPP00000099_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3488	.	-	.	insertions 3 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3488	139	-	.	alignment_id 1 ; Query SPP00000099_1.0 ; Align 3489 7 156 ; Align 3330 59 72
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000098_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Mus musculus # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 124
   Query range: 24 -> 90
  Target range: 3455 -> 3257

   25 : GlyGluProValSerLeuGlySerLeuArgGlyLysValLeuLeuIleGluAsnValAlaSe :   45
        |||! !  !||| !!!!!..!:!!!!!||||||:!!|||:!!! !:!!  !|||:!!|||||
        GlyAlaGluValArgPheSerAlaPheArgGlyGlnValValCysValThrAsnLeuAlaSe
 3455 : GGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTC : 3395

   46 : rLeuUnkGlyThrThrIleArgAspTyrThrGluMetAsnAspLeuGlnLysArgLeuGlyP :   66
        |  !   |||! !|||! !!!! !!|||! !!  :!:    ! |||     !!:!!!!..! 
        rArg***GlyLysThrAsnSerHisTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerG
 3394 : GAGATGAGGCAAGACGAACAGCCACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGG : 3332

   67 : roArgGlyLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGlnGluAsnGlyLys :   86
         !|||||||||!.!:!!:!!|||||||||||||||||||||  !  !||||||   |||   
        lyArgGlyLeuAlaIleValGlyPheProCysAsnGlnPheMetGlyGlnGluProGlyAla
 3331 : GCCGCGGCCTCGCGATCGTCGGCTTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCC : 3272

   87 : AsnGluGluIle :   90
        .!...!||||||
        GluSerGluIle
 3271 : GAATCGGAGATC : 3258

vulgar: SPP00000098_1.0 24 90 . scaffold_34:subseq(208736,6503) 3455 3257 - 124 M 66 198
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3455	124	-	.	gene_id 1 ; sequence SPP00000098_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3455	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3455	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3455	124	-	.	alignment_id 1 ; Query SPP00000098_1.0 ; Align 3456 25 198
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000066_1.0 # Protein # Glutathione peroxidase 2 (GPx2) # Pan troglodytes # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 135
   Query range: 6 -> 82
  Target range: 3488 -> 3257

    7 : SerPheTyrAspLeuSerAlaIleSerLeuAspGlyGluLysValAspPheAsnThrPheAr :   27
        .!!|||:!!||||||! !::!   ..!:!!||||||! !:!!|||  !|||:::.!!|||||
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   28 : gGlyArgAlaValLeuIleGluAsnValAlaSerLeuUnkGlyThrThrThrArgAspPheT :   48
        ||||!:!!.!|||! !:!!  !|||:!!||||||  !   |||! !|||!.!!!! !!!:!!
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   49 : hrGlnLeuAsnGluLeuGlnCysArgPhePro<->ArgArgLeuValValLeuGlyPhePro :   67
         !   |||   :!!|||   ...!:!||| !!   ||| !!|||!.!:!!:!!|||||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

   68 : CysAsnGlnPheGlyHisGlnGluAsnCysGlnAsnGluGluIle :   82
        ||||||||||||  !  !||||||    !!   .!...!||||||
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIle
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATC : 3258

vulgar: SPP00000066_1.0 6 82 . scaffold_34:subseq(208736,6503) 3488 3257 - 135 M 52 156 G 0 3 M 24 72
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3488	135	-	.	gene_id 1 ; sequence SPP00000066_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3488	.	-	.	insertions 3 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3488	135	-	.	alignment_id 1 ; Query SPP00000066_1.0 ; Align 3489 7 156 ; Align 3330 59 72
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000005_1.0 # Protein # Glutathione peroxidase 2 (GPx2) # Homo sapiens # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 135
   Query range: 6 -> 82
  Target range: 3488 -> 3257

    7 : SerPheTyrAspLeuSerAlaIleSerLeuAspGlyGluLysValAspPheAsnThrPheAr :   27
        .!!|||:!!||||||! !::!   ..!:!!||||||! !:!!|||  !|||:::.!!|||||
        GlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheAr
 3488 : GGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCG : 3428

   28 : gGlyArgAlaValLeuIleGluAsnValAlaSerLeuUnkGlyThrThrThrArgAspPheT :   48
        ||||!:!!.!|||! !:!!  !|||:!!||||||  !   |||! !|||!.!!!! !!!:!!
        gGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrL
 3427 : CGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACA : 3365

   49 : hrGlnLeuAsnGluLeuGlnCysArgPhePro<->ArgArgLeuValValLeuGlyPhePro :   67
         !   |||   :!!|||   ...!:!||| !!   ||| !!|||!.!:!!:!!|||||||||
        ysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPhePro
 3364 : AGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCG : 3305

   68 : CysAsnGlnPheGlyHisGlnGluAsnCysGlnAsnGluGluIle :   82
        ||||||||||||  !  !||||||    !!   .!...!||||||
        CysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIle
 3304 : TGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATC : 3258

vulgar: SPP00000005_1.0 6 82 . scaffold_34:subseq(208736,6503) 3488 3257 - 135 M 52 156 G 0 3 M 24 72
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3258	3488	135	-	.	gene_id 1 ; sequence SPP00000005_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3258	3488	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3258	3488	.	-	.	insertions 3 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3258	3488	135	-	.	alignment_id 1 ; Query SPP00000005_1.0 ; Align 3489 7 156 ; Align 3330 59 72
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000082_1.0 # Protein # Glutathione peroxidase 1 (GPx1) # Caenorhabditis elegans # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 169
   Query range: 0 -> 93
  Target range: 3494 -> 3215

    1 : MetSerSerValTyrAspPheAsnValLysAsnAlaAsnGlyAspAspValSerLeuSerAs :   21
        :!:.!!.!! !!:!!|||.!!!    !:!!:!!  !:!!|||!  !!:||| !!!!!|||! 
        ValGlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAl
 3494 : GTCGGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGC : 3434

   22 : pTyrLysGlyLysValLeuIleIleValAsnValAlaSerGlnCysGlyLeuThrAsnLysA :   42
        !!:!:::|||:!!|||:!!  !:!!..!|||:!!||||||::!!! |||  !||||||!..:
        aPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerH
 3433 : CTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCC : 3371

   43 : snTyrThrGlnLeuLysGluLeuLeuAspValTyrLysLysAspGlyLeuGluValLeuAla :   62
        !!|||! !   |||  !:!!|||  !!    !!:!..!     !||||||! !:!!:!!!.!
        isTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGly
 3370 : ACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGC : 3311

   63 : PheProCysAsnGlnPheAlaGlyGlnGluProSerCysGluIleAspIleGlnAlaPheVa :   83
        ||||||||||||||||||  !||||||||||||.!!..!|||   !!:|||:!!||||||!.
        PheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAl
 3310 : TTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGC : 3248

   84 : lAlaAspLysPheLysPheGluProThrLeu :   93
        !  !..!!:!  !   .!.!!:|||.!!|||
        aArgSerArgGlyPheLeuAspProAlaLeu
 3247 : GCGGTCCAGGGGTTTCCTGGACCCGGCGCTC : 3216

vulgar: SPP00000082_1.0 0 93 . scaffold_34:subseq(208736,6503) 3494 3215 - 169 M 93 279
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3216	3494	169	-	.	gene_id 1 ; sequence SPP00000082_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3216	3494	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3216	3494	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3216	3494	169	-	.	alignment_id 1 ; Query SPP00000082_1.0 ; Align 3495 1 279
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000086_1.0 # Protein # Glutathione peroxidase 4 (GPx4) # Drosophila melanogaster # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 150
   Query range: 77 -> 156
  Target range: 3497 -> 3260

   78 : AsnAlaAlaSerIleTyrGluPheThrValLysAspThrHisGlyAsnAspValSerLeuGl :   98
        :!!!.!!.!.!!.!!:!!!!:.!!! !  !:!!|||! ! !!|||   !!:||| !!!!!..
        HisValGlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSe
 3497 : CACGTCGGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTC : 3437

   99 : uLysTyrLysGlyLysValValLeuValValAsnIleAlaSerLysCysGlyLeuThrLysA :  119
        !   !:!:::|||:!!||||||! !|||..!|||:!:||||||!:!!! |||  !|||!!.!
        rAlaPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnS
 3436 : GGCCTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACA : 3374

  120 : snAsnTyrGluLysLeuThrAspLeuLysGluLysTyrGlyGluArgGlyLeuValIleLeu :  139
        :!:!!|||:!!   |||.!! ! |||   ! !:!!!:!..!!  |||||||||!.!|||:!!
        erHisTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleVal
 3373 : GCCACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTC : 3314

  140 : AsnPheProCysAsnGlnPheGlySerGlnMetProGluAlaAspGlyGlu :  156
        ..!||||||||||||||||||  !.!!|||  !|||!  |||!!:..!|||
        GlyPheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGlu
 3313 : GGCTTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAG : 3261

vulgar: SPP00000086_1.0 77 156 . scaffold_34:subseq(208736,6503) 3497 3260 - 150 M 79 237
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3261	3497	150	-	.	gene_id 1 ; sequence SPP00000086_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3261	3497	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3261	3497	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3261	3497	150	-	.	alignment_id 1 ; Query SPP00000086_1.0 ; Align 3498 78 237
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000105_1.0 # Protein # Glutathione peroxidase 8 (GPx8) # Mus musculus # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 125
   Query range: 42 -> 127
  Target range: 3497 -> 3242

   43 : ArgThrAsnSerPheTyrSerPheGluValLysAspAlaLysGlyArgThrValSerLeuGl :   63
        !.!..!..!.!!|||:!!..!.!!  !  !:!!|||  ! ! |||  !  !||| !!!!!..
        HisValGlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSe
 3497 : CACGTCGGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTC : 3437

   64 : uLysPheLysGlyLysAlaSerLeuValValAsnValAlaSerAspCysArgPheThrAspL :   84
        !   |||:::|||:!!!.!  !! !|||..!|||:!!||||||   !!  !!   |||:!!!
        rAlaPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnS
 3436 : GGCCTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACA : 3374

   85 : ysSerTyrGlnThrLeuArgGluLeuHisLysGluPheGlyProTyrHisPheAsnValLeu :  104
        ..  !|||:!!  !|||  !:!!|||  !  !:!!|||..!  !  !  !.!!   :!!:!!
        erHisTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleVal
 3373 : GCCACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTC : 3314

  105 : AlaPheProCysAsnGlnPheGlyGluSerGluProLysSerSerLysGluValGluSerPh :  125
        !.!||||||||||||||||||  !!  ..!||||||   :!!..!..!|||:!!:!!:!!||
        GlyPheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPh
 3313 : GGCTTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTT : 3251

  126 : eAlaArg :  127
        |||||||
        eAlaArg
 3250 : TGCGCGG : 3243

vulgar: SPP00000105_1.0 42 127 . scaffold_34:subseq(208736,6503) 3497 3242 - 125 M 85 255
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3497	125	-	.	gene_id 1 ; sequence SPP00000105_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3497	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3497	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3497	125	-	.	alignment_id 1 ; Query SPP00000105_1.0 ; Align 3498 43 255
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000104_1.0 # Protein # Glutathione peroxidase 7 (GPx7) # Mus musculus # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 143
   Query range: 23 -> 104
  Target range: 3485 -> 3242

   24 : PheTyrAspPheLysAlaValAsnIleArgGlyLysLeuValSerLeuGluLysTyrArgGl :   44
        |||:!!|||.!!! !::!! !:!!|||  !|||  !  !||| !!!!!..!   !:!|||||
        PheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheArgGl
 3485 : TTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGG : 3425

   45 : ySerValSerLeuValValAsnValAlaSerGluCysGlyPheThrAspGlnAsnTyrArgA :   65
        |..!|||  !! !|||..!|||:!!||||||..!!! |||   |||:!!...:!!|||!:!!
        yGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrLysG
 3424 : CCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACAAGG : 3362

   66 : laLeuGlnGlnLeuGlnArgAspLeuGlyProHisHisPheAsnValLeuAlaPheProCys :   85
        .!|||  !:!!|||     !.!.!!!..!  !!.!  !.!!   :!!:!!!.!|||||||||
        lyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPheProCys
 3361 : GCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCGTGC : 3302

   86 : AsnGlnPheGlyGlnGlnGluProAspThrAsnArgGluIleGluAsnPheAlaArg :  104
        |||||||||  !   |||||||||! !.!!.!.  !||||||:!!  !|||||||||
        AsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAlaArg
 3301 : AACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCGCGG : 3243

vulgar: SPP00000104_1.0 23 104 . scaffold_34:subseq(208736,6503) 3485 3242 - 143 M 81 243
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3485	143	-	.	gene_id 1 ; sequence SPP00000104_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3485	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3485	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3485	143	-	.	alignment_id 1 ; Query SPP00000104_1.0 ; Align 3486 24 243
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000071_1.0 # Protein # Glutathione peroxidase 7 (GPx7) # Pan troglodytes # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 155
   Query range: 24 -> 105
  Target range: 3485 -> 3242

   25 : PheTyrAspPheLysAlaValAsnIleArgGlyLysLeuValSerLeuGluLysTyrArgGl :   45
        |||:!!|||.!!! !::!! !:!!|||  !|||  !  !||| !!!!!..!   !:!|||||
        PheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheArgGl
 3485 : TTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGG : 3425

   46 : ySerValSerLeuValValAsnValAlaSerGluCysGlyPheThrAspGlnHisTyrArgA :   66
        |..!|||  !! !|||..!|||:!!||||||..!!! |||   |||:!!...||||||!:!!
        yGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrLysG
 3424 : CCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACAAGG : 3362

   67 : laLeuGlnGlnLeuGlnArgAspLeuGlyProHisHisPheAsnValLeuAlaPheProCys :   86
        .!|||  !:!!|||     !.!.!!!..!  !!.!  !.!!   :!!:!!!.!|||||||||
        lyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPheProCys
 3361 : GCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCGTGC : 3302

   87 : AsnGlnPheGlyGlnGlnGluProAspSerAsnLysGluIleGluSerPheAlaArg :  105
        |||||||||  !   |||||||||! !:!!.!...!||||||:!!:!!|||||||||
        AsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAlaArg
 3301 : AACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCGCGG : 3243

vulgar: SPP00000071_1.0 24 105 . scaffold_34:subseq(208736,6503) 3485 3242 - 155 M 81 243
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3485	155	-	.	gene_id 1 ; sequence SPP00000071_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3485	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3485	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3485	155	-	.	alignment_id 1 ; Query SPP00000071_1.0 ; Align 3486 25 243
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000011_1.0 # Protein # Glutathione peroxidase 8 (GPx8) # Homo sapiens # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 136
   Query range: 43 -> 127
  Target range: 3494 -> 3242

   44 : IleAsnSerPheTyrAlaPheGluValLysAspAlaLysGlyArgThrValSerLeuGluLy :   64
        :!!..!.!!|||:!!! !.!!  !  !:!!|||  ! ! |||  !  !||| !!!!!..!  
        ValGlyGlyPheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAl
 3494 : GTCGGCGGGTTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGC : 3434

   65 : sTyrLysGlyLysValSerLeuValValAsnValAlaSerAspCysGlnLeuThrAspArgA :   85
         !:!:::|||:!!|||  !! !|||..!|||:!!||||||   !!      !|||:!!!!!:
        aPheArgGlyGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerH
 3433 : CTTCCGCGGCCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCC : 3371

   86 : snTyrLeuGlyLeuLysGluLeuHisLysGluPheGlyProSerHisPheSerValLeuAla :  105
        !!|||  !||||||  !:!!|||  !  !:!!|||..!  ! !!  !.!!:!!:!!:!!!.!
        isTyrLysGlyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGly
 3370 : ACTACAAGGGCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGC : 3311

  106 : PheProCysAsnGlnPheGlyGluSerGluProArgProSerLysGluValGluSerPheAl :  126
        ||||||||||||||||||  !!  ..!|||||| !! !!..!..!|||:!!:!!:!!|||||
        PheProCysAsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAl
 3310 : TTCCCGTGCAACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGC : 3248

  127 : aArg :  127
        ||||
        aArg
 3247 : GCGG : 3243

vulgar: SPP00000011_1.0 43 127 . scaffold_34:subseq(208736,6503) 3494 3242 - 136 M 84 252
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3494	136	-	.	gene_id 1 ; sequence SPP00000011_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3494	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3494	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3494	136	-	.	alignment_id 1 ; Query SPP00000011_1.0 ; Align 3495 44 252
# --- END OF GFF DUMP ---
#

C4 Alignment:
------------
         Query: SPP00000010_1.0 # Protein # Glutathione peroxidase 7 (GPx7) # Homo sapiens # Complete
        Target: scaffold_34:subseq(208736,6503) [revcomp]
         Model: protein2genome
     Raw score: 155
   Query range: 24 -> 105
  Target range: 3485 -> 3242

   25 : PheTyrAspPheLysAlaValAsnIleArgGlyLysLeuValSerLeuGluLysTyrArgGl :   45
        |||:!!|||.!!! !::!! !:!!|||  !|||  !  !||| !!!!!..!   !:!|||||
        PheHisAspLeuMetSerGluAspIleAspGlyAlaGluValArgPheSerAlaPheArgGl
 3485 : TTCCACGACCTCATGAGCGAGGACATCGACGGCGCGGAGGTGCGCTTCTCGGCCTTCCGCGG : 3425

   46 : ySerValSerLeuValValAsnValAlaSerGluCysGlyPheThrAspGlnHisTyrArgA :   66
        |..!|||  !! !|||..!|||:!!||||||..!!! |||   |||:!!...||||||!:!!
        yGlnValValCysValThrAsnLeuAlaSerArg***GlyLysThrAsnSerHisTyrLysG
 3424 : CCAGGTCGTCTGCGTCACGAATTTGGCGTCGAGATGAGGCAAGACGAACAGCCACTACAAGG : 3362

   67 : laLeuGlnGlnLeuGlnArgAspLeuGlyProHisHisPheAsnValLeuAlaPheProCys :   86
        .!|||  !:!!|||     !.!.!!!..!  !!.!  !.!!   :!!:!!!.!|||||||||
        lyLeuAlaLysLeuGlyAlaGlnPheSerGlyArgGlyLeuAlaIleValGlyPheProCys
 3361 : GCCTCGCGAAGCTCGGCGCGCAGTTCTCGGGCCGCGGCCTCGCGATCGTCGGCTTCCCGTGC : 3302

   87 : AsnGlnPheGlyGlnGlnGluProAspSerAsnLysGluIleGluSerPheAlaArg :  105
        |||||||||  !   |||||||||! !:!!.!...!||||||:!!:!!|||||||||
        AsnGlnPheMetGlyGlnGluProGlyAlaGluSerGluIleLysAlaPheAlaArg
 3301 : AACCAGTTCATGGGCCAGGAGCCGGGCGCCGAATCGGAGATCAAGGCCTTTGCGCGG : 3243

vulgar: SPP00000010_1.0 24 105 . scaffold_34:subseq(208736,6503) 3485 3242 - 155 M 81 243
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome 1.4.0
##date 2009-02-27
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	gene	3243	3485	155	-	.	gene_id 1 ; sequence SPP00000010_1.0 ; gene_orientation .
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	cds	3243	3485	.	-	.	
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	exon	3243	3485	.	-	.	insertions 0 ; deletions 0
scaffold_34:subseq(208736,6503)	exonerate:protein2genome	similarity	3243	3485	155	-	.	alignment_id 1 ; Query SPP00000010_1.0 ; Align 3486 25 243
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis
