Puntuación SECIS
Total hits : 64
1 Contig4131.0: 40235 40322
CGUUUAAGGC GGUGGAU AUGUCACAGAUC AUGAC GCUGGAUUCCU AA UCCAC AGGGGACCAU GGAA CUUUG ACGGUGC CUUCUUCAGC
COVE score: 0
(Recommended threshold for COVE: 15)
2 Contig2633.0: 4650 4749
AGGGAGGAGA GGGAAGU GAUGGAGAUUGAG AUGAC AAAAAUUUGGUC AA GUUUGGUUA AGGUAAAUUUUU GGAG UCGAUUUAG GCCAUUU
UUAGGGGUCG
COVE score: 12.18
(Recommended threshold for COVE: 15)
3 Contig3113: 2308 2396
aagcucaccu acguggg uugaaaagcucau augag gccgauacaag aa ggucug cgugcauuggc cgaa uag cuuugau aaaaccauug
COVE score: 7.93
(Recommended threshold for COVE: 15)
4 Contig3144: 3250 3346
AUGCAUCCAA CAGAUGU UCAAUGCGCAA AUGAA GGCCGAGGUGA AA GCCCUGCAGGCGUCU GUCUCCGGUC AGAU UCCGA AAAUUCG
GAAGACCAUC
COVE score: 17.71
(Recommended threshold for COVE: 15)
5 Contig3157: 2305 2409
GGACGUGGCA UGCAGGU CAACCGGUGCCAG AUGAG CCGUCGACCUC AA UCAUCACGGACGGUCG GAGGUUGUCAG CGAC ACUUGUAAA
UGUCUUA CGUUUGUGCC
COVE score: 1.76
(Recommended threshold for COVE: 15)
6 Contig3159: 312 399
CGUUUAAGGC GGUGGAU AUGUCACAGAUC AUGAC GCUGGAUUCCU AA UCCAC AGGGGACCAU GGAA CUUUG ACGGUGC CUUCUUCAGC
COVE score: 0
(Recommended threshold for COVE: 15)
7 Contig3170: 2102 2198
ccuggaaaaa uggugcc guuucccca augaa accuguuggug aa aaacaacguucc ugcuaaggggc ggag auucaaacc gggagcg
ggaaaaaaaa
COVE score: 13.97
(Recommended threshold for COVE: 15)
8 Contig3340: 2049 2141
CUGGUUAUGA AGUCGAC GAAUCUGGGUCAG AUGAG UCGGAUUACGAU AA CAAUAUC GCGUGCACCGA UGAC GGAGC AUCGAAU
GCGGUCUAUA
COVE score: 0
(Recommended threshold for COVE: 15)
9 Contig3383: 3922 4024
uauuuuuuuu ucuucaa aaggagaaaaaua augaa ugggaaggcggg aa aaauuuuaaNNNauu ucuuuuaucccg ugaa auacga
cgagagg agaguggggu
COVE score: 6.92
(Recommended threshold for COVE: 15)
10 Contig3410: 758 858
UACUCAGGCA AUCAUUC AAACGCCAAUGUG AUGAC AUUUAUAAGCCG AA UUGGCAACGU CGGUCUGUGAU GGAG UCGACUGCU CAACUGGU
GGCGGCUGAU
COVE score: 0
(Recommended threshold for COVE: 15)
11 Contig3699: 10610 10703
UGUUGUAGAU CGUAUCA ACAAGCAAAAAUG AUGAA GCAAGAGCAGC AA UGGAAACAA CUGCAUUUUU AGAU UAGAAC UUUUGCG
AUAUUACACU
COVE score: 2.80
(Recommended threshold for COVE: 15)
12 Contig3771: 4511 4604
CAGUUGAACA CCGAUGC UCUCCUUGGUAAA AUGAU CCAAAUACCGCCG AA UGCUAG UGGCGAUGUGGG CGAA UCCGU CGACGAG
UUGAGUAAGA
COVE score: 0
(Recommended threshold for COVE: 15)
13 Contig3842: 1806 1899
UGUGCAGCGC CAAUCAU ACACUGGACAUGC AUGAA ACGUAGUACUGGG AA CAUUC UGCGUAAUAUGU CGAG GAUGCU AUGUAAG
CAGUCAUCUG
COVE score: 3.47
(Recommended threshold for COVE: 15)
14 Contig3884: 11271 11355
CUAAAUCCGA CCCCGCG CUGAAUU AUGAG CUGCUGAGUGC AA UGGGC GCGUUUAGUGA UGAA UUCUCU CGCCUGG CCAACUGCCA
COVE score: 0.34
(Recommended threshold for COVE: 15)
15 Contig3930: 1777 1863
AGGACGUACU GCGAUAU GGCCCC AUGAA UUUUGUGAUGCC AA AUCUGU GGCAUACGCGG GGAU UCCAGCC ACAAUUU UCUGGCGUAG
COVE score: 0.84
(Recommended threshold for COVE: 15)
16 Contig3493.0: 5937 6030
GCAAUAGACC UGGCAAG CGUUGCU AUGAC AAGAGCUGUGUC AA GGAUUGUCAAGUCA GGUUCAGCUAU GGAU AUAAG CAUACUA
AUGAAGACAA
COVE score: 2.56
(Recommended threshold for COVE: 15)
17 Contig4142.0: 15715 15816
UGUUUGAAUU ACUUCCA GCAACUGCGUGAA AUGAG AUUGGUUGUGC AA AAUAUCAAAACUGCA CUUGGCGGAU CGAG CAUGCUCA
GCAAGCU CUUCCAAUCG
COVE score: 2.26
(Recommended threshold for COVE: 15)
18 Contig4056: 3724 3819
UGGAGCGAGU UUGAGCG CCUAAUGCGCGAA AUGAG GUACUUGGCGCCG AA UUGUU CUGUCUAAUUGC CGAA GGCUCAAG CGCCUCA
GCCUCGACGA
COVE score: 3.93
(Recommended threshold for COVE: 15)
19 Contig4056: 14803 14898
GUCGCCGCAU GACCUGU CGCUGAUGCCG AUGAU GCUCCGGGAUUUU AA AAUUG ACAAUUCCAGGU UGAU UACGCCAAUA CUAGAGC
GCGUCGGCGA
COVE score: 2.95
(Recommended threshold for COVE: 15)
20 Contig4072: 43556 43649
GCACGGCGAA AGCGCUG CCC AUGAC UGUCGCCAGAAU AA ACAGCUCUGCACGCG AAUUGGCAAUG CGAU GCAACUCA CAAACCU
GACUUGUUGA
COVE score: 4.27
(Recommended threshold for COVE: 15)
21 Contig4073: 11685 11782
UACGUCAUUG AGCCGGU UAGUUGCGUCAUC AUGAA AUGACUGUAUC AA UGCAUGUCGCCCC GUGCGGUAAC AGAA CACGAU UCAUGUU
CAGGAGUGGG
COVE score: 9.74
(Recommended threshold for COVE: 15)
22 Contig4092: 17094 17185
UUCUCCAUGG ACACCGG UGGCACUCCCGUC AUGAG GAUGUAUAGUAC AA UGCCGAUG GACCACAUGUC CGAG GCG GUGGAGU
ACUCCUCCCC
COVE score: 0
(Recommended threshold for COVE: 15)
23 Contig4096: 54038 54133
CGCUCAAAAC GUCUCUA CGAUUCGAGAGUU AUGAU GUUUGCCCUGAUC AA GGGGUGGU GACCAGGGUAAC GGAG CAUGG CCAAGGC
UACCUAUCAA
COVE score: 0.72
(Recommended threshold for COVE: 15)
24 Contig4102: 4307 4399
UGGCGACUUC AGAUGUA UACAGAGCCUAAA AUGAC GUUAUACAACUC AA CAAGC GGCUUGUUUGAC CGAC GAGAUA AUAGGCU
CCUGCAGGGC
COVE score: 12.07
(Recommended threshold for COVE: 15)
25 Contig4102: 17220 17313
CUAAGCCCGU UCCACGU CGAGCUGCUUGAC AUGAU GUUAACCGUUGC AA UUGCCAAA GGCGCGGUUGU GGAA CCCGC AUUCCGA
GAACGAUUCG
COVE score: 4.32
(Recommended threshold for COVE: 15)
26 Contig4113: 26256 26344
ACCAUGACAG UGAUGAG ACGGACAAUCAGG AUGAU GGCUACGCGUC AA GUGACG ACUGCGAGCC UGAA GGCG ACGGUCA
UUCGUCGGCC
COVE score: 6.67
(Recommended threshold for COVE: 15)
27 Contig4128: 32343 32444
AACAGUACUC CACAGCU GCAAAAGAGUUUU AUGAA CCGCGGCCGCA AA CUCCCAUGGAGGAAC AGCGGUCCGU CGAU GCCCCCCAA
AGCAUG AUCGUUGAGC
COVE score: 1.52
(Recommended threshold for COVE: 15)
28 Contig4134: 57424 57514
AUCUGAGAAG UGAGGAU UAUGCAG AUGAC AGUAGGAUACC AA UCAUGAGGAUAG GGUCUCCGUU AGAA GAUGCA AUGCGCA
GGGACUUCAC
COVE score: 0
(Recommended threshold for COVE: 15)
29 Contig4157: 63676 63780
ACAUUCGCCA AUUAUGC AGACAUCGAGCUC AUGAC GAGGCACUUUUAG AA GUUAUGCAGAUGUCGA GUAGAAGCGCUUC GGGAG
CUGA AUGCGGU GCUUAUGUGC
COVE score: 0
(Recommended threshold for COVE: 15)
30 Contig4158: 79982 80086
UAAACAUCCA UACCUCA GACCAGGACACAG AUGAU AUAUGUUUAAUU AA CGGUAAUGCCUGCAA UGUUAGACAUAG CGAG UUCUGCUU
UAUCGUA GUGUAGUAAU
COVE score: 0
(Recommended threshold for COVE: 15)
31 Contig4170: 70896 70995
AUACGUUGCA AAAGUUG CUUAACUCUGCCG AUGAU GUGUUCCCAUUC AA GAGCCUUCCGAAAAGC GAGGGCGAUGU UGAG CCG UCGGCUU
CUGUUUUUUC
COVE score: 9.26
(Recommended threshold for COVE: 15)
32 Contig4171: 9594 9690
ACAAUGCCGG AGUGCAU AAAGACCGGCGAA AUGAU CCCAUGCUUUUUG AA UUUGUC UGGAAAUCAGGG UGAG CAUACCUA AAUAAUU
AAAAACAAGC
COVE score: 7.46
(Recommended threshold for COVE: 15)
33 Contig4171: 14522 14618
AAGCGGGUGC GCCAGUA AGUGUUGCUCCUG AUGAU GUUCGGCCUGU AA AUGGUGUGCCAGU AAAGGUUGGUC CUGAU GAU GUUCGGC
CUGCAAAUGG
COVE score: 16.63
(Recommended threshold for COVE: 15)
34 Contig4171: 14702 14798
UAAAUGAUGG ACCAGUA AAGGUUGGUCCUG AUGAU GUUCGGCCUGU AA AUGGUGUGCCAGU AAAGGUUGAUC CUGAU GCU GUUCGGC
CUGUAAAUGU
COVE score: 14.24
(Recommended threshold for COVE: 15)
35 Contig3766.0: 167 259
GCAGAACAGU UUCAUGG UUAUACGUUAU AUGAU GAGGGACGUGA AA UCCAGAGAAUA UUAUGACUCUC UGAA CGAC CCGCUGA
CCCAAAUUGG
COVE score: 7.92
(Recommended threshold for COVE: 15)
36 Contig4091.0: 2571 2668
UUUAUGAGCU GAGCAUU AAGGAAGAGAGGG AUGAG CGAUGCGUGUCU AA GGCUUGCUU UGAUGUGCAUUG AUGAC GGCACU GUAGUAU
CUUUAAUCAC
COVE score: 6.21
(Recommended threshold for COVE: 15)
37 Contig3902.0: 5753 5854
CGACGUUCUA CGAUCUG CUGAAGAAAUUGU AUGAC GAGUGCAAUUCCA AA UGCGGUUCCAGGGGA UCGAAUUGCCAU GGAA AAGCG
UGCAUC AAGGAAUGUA
COVE score: 1.08
(Recommended threshold for COVE: 15)
38 Contig4173.0: 48520 48609
GCAGUUCCGC GGACUCA GCGGCAGUGCCAU AUGAC GCGGGCGCGUC AA ACUGCCCAU ACGCGCCGUC UGAG CAC UGCUUU UUGACGCUGU
COVE score: 15.60
(Recommended threshold for COVE: 15)
39 Contig4175.0: 69125 69211
CCAAUGACGG UGACGCC GCGAGUGCUA AUGAA GGGGCGACUUC AA CGCACGGU AAAGCGUCCA CGAG UCG GAUUCUA AAGCUGGAUG
COVE score: 5.13
(Recommended threshold for COVE: 15)
40 Contig3: 10497 10582
UGUACCCCCC GGAAAUG CGAGCCCAA AUGAG AACUCCGGUGG AA UCGGAC CCAUUGGAAGU GGGAC AUG CUUCGCC AGGUACUGGC
COVE score: 0.93
(Recommended threshold for COVE: 15)
41 Contig158: 4286 4385
AGCAAUACUA UCGACAA AGUCUGUAGCAGA AUGAA UGGCAUUCUGU AA AUCAACGCUCUGAAGC CUAGAAAGCUG AGAG UGAA GUUGUUG
UAAACUUUCU
COVE score: 6.09
(Recommended threshold for COVE: 15)
42 Contig284: 5 102
acaaaaguga caugacc gugacgaccaucu augau auucucagcaa aa acauucgaagcg uuguugaagu cgau acGCAG ACGUCAUG
GAUGAAAGAU
COVE score: 8.18
(Recommended threshold for COVE: 15)
43 Contig4183.1: 47757 47861
UGGUUCCAGU CACCCUC GACGCUCGGGGGC AUGAG CGGGCGGAGGG AA GCGGCGUGUUCCUCGC GCUUCUGCUCC UCGAA CUUCAACUC
GAGCUG CUCGGCGUCC
COVE score: 4.21
(Recommended threshold for COVE: 15)
44 Contig888: 444 529
UGUACCCCCC GGAAAUG CGAGCCCAA AUGAG AACUCCGGUGG AA UCGGAC CCAUUGGAAGU GGGAC AUG CUUCGCC AGGUACUGGC
COVE score: 0.93
(Recommended threshold for COVE: 15)
45 Contig4184.1: 51864 51958
GAUCCCCUGU UGCGCGC ACUGCACCUGGUG AUGAA AGGUGAUGUGA AA GCAAUGGUGGCCC AAUGUCCUCU UGAC AAA UGGCGCG
AGGUGUUGGU
COVE score: 4.99
(Recommended threshold for COVE: 15)
46 Contig919: 1019 1124
AUAAAUGCAU UGCUUCC CACUCCCGUCGUU AUGAU GAUGCUACUAAG AA AGCCUUGGAUGGCAU UAAAGAGCGUC AGAA ACAACUUGAU
GAACUUA AAAAGAAACU
COVE score: 8.13
(Recommended threshold for COVE: 15)
47 Contig4185.1: 73023 73129
AUUUCUUCUC AACGUUU UCUCAUCCCAUCG AUGAG GACGAUGAUGAU AA UGGCAUAAAGACCUGG GGUAUCACUGC UGAA AAUAUUGUGG
AGAGAAU AGCCAAAUCU
COVE score: 1.63
(Recommended threshold for COVE: 15)
48 Contig4185.1: 158268 158356
CCUACAUCGC CCAUUGU UGAAAAGG AUGAC GACGCGUUGGG AA AUGAU ACUGACUGUU UGAU GAACUCCGAC GAAAAGG GGGCAGGAAA
COVE score: 8.58
(Recommended threshold for COVE: 15)
49 Contig4186.1: 15835 15928
UAGUCUUUUG UUGCGCG GAAGUAGAGCGCG AUGAA GGCUUCUUGAC AA UGGGU CGCAGGAGCC GGAU CACAUCCACA CUUAUGA
ACUGCGUCAG
COVE score: 1.93
(Recommended threshold for COVE: 15)
50 Contig4186.1: 16587 16679
UGUGUAGAAU CUAAACA GAAGUGCGGCGUU AUGAG CAGCGCAGCAU AA GGAGUGU GUGGGUGUCG CGAA AUCAGU AGAUUUAG
UGGAUAUAUU
COVE score: 0
(Recommended threshold for COVE: 15)
51 Contig3991.0: 97 190
UGUGCAGCGC CAAUCAU ACACUGGACAUGC AUGAA ACGUAGUACUGGG AA CAUUC UGCGUAAUAUGU CGAG GAUGCU AUGUAAG
CAGUCAUCUG
COVE score: 3.47
(Recommended threshold for COVE: 15)
52 Contig1003: 263 356
GAAGGACAAU UAAUAAU AGCUCUGGAAAGA AUGAG GUGGCUGGGCUG AA GUGGGAAAG AUGCUCAGUUGU GGAU GUG UCUACUG
AUGAAAAUCA
COVE score: 6.07
(Recommended threshold for COVE: 15)
53 Contig1341: 1650 1749
AUGUGAAAGA GGAGAUU CAGACGCCGU AUGAA AAGUUGGAAGGG AA AGUGAAACAAGA UUUGACGACUU UGAA GGAUAAAAUU GAGAUUC
AAUUGAGUCC
COVE score: 5.42
(Recommended threshold for COVE: 15)
54 Contig1534: 137 235
CAGUCACGUG ACAGGUG UGUGAUAAGCCAC AUGAA CAGUGCAUGUUC AA CCACGUGAUCAGUGCA UGAUAUCCACG UGAU CAG UGCAUG
AUCAGUUACG
COVE score: 0
(Recommended threshold for COVE: 15)
55 Contig1846: 903 997
ggaguuucag ccuucac accaguccuucca augaa aaccaggacug aa uuuagga aggacugguu ggau cuccuuugc guccagg
gacuuucaga
COVE score: 9.75
(Recommended threshold for COVE: 15)
56 Contig4121.0: 8471 8566
CCGUACGGGU CUCUACU GAAAACUCGGCAA AUGAG GGCCUCACGUCC AA CGCCGCUAUACC GAUGAGGCGCU GGAC GCA GUUAACG
GUGGUUGCGA
COVE score: 4.59
(Recommended threshold for COVE: 15)
57 Contig2131: 775 876
UUUUUCAGUA ACUCUCC CUCUUUCCCUCC AUGAC AGGCACUGaaC aa UGUuGAggaaaaAUCA GUUUGGUGCUA ggaa gUAACUG
GCAggau acgcgugcgc
COVE score: 4.34
(Recommended threshold for COVE: 15)
58 Contig2428: 724 829
AUAAAUGCAU UGCUUCC CACUCCCGUCGUU AUGAU GAUGCUACUAAG AA AGCCUUGGAUGGCAU UAAAGAGCGUC AGAA ACAACUUGAU
GAACUUA AAAAGAAACU
COVE score: 8.13
(Recommended threshold for COVE: 15)
59 Contig2509: 1272 1373
UGAAAGAUGA UAUAAUU AAUAAGGAAUCG AUGAA UACUGUUUCAAUC AA UGACAAUAAGCCACU GAAGAAGCAGUU GGAG GAGUG
GACUACA GUGGUUGAAA
COVE score: 0.20
(Recommended threshold for COVE: 15)
60 Contig2517: 2 90
AAUUAAUAAC AGCUCCA GAAAGA AUGAA GCAGCUGGGCC AA AGUGGAAAUGA CUCUCAGUUGU GGAU GUGUC UGGUGGU AAAAGUAAAG
COVE score: 10.79
(Recommended threshold for COVE: 15)
61 Contig2883: 684 788
GGACGUGGCA UGCAGGU CAACCGGUGCCAG AUGAG CCGUCGACCUC AA UCAUCACGGACGGUCG GAGGUUGUCAG CGAC ACUUGUAAA
UGUCUUA CGUUUGUGCC
COVE score: 1.76
(Recommended threshold for COVE: 15)
62 Contig2953: 1468 1555
GUGGUCUGAC GUAUCAC CCCGUGU AUGAC GACGUGUCGUUG AA CGCUUU CAGUGACCUGUU CGAG AAAAAG GAGGAAC CAGACGCCAA
COVE score: 14.57
(Recommended threshold for COVE: 15)
63 Contig2966: 3105 3197
ACUGAGUCGG CUACGUG AAGAAGCUACGAA AUGAG GCGCCCAGUGUC AA UGAAGUG CGCAAUGGCGC UGAA CACGA CAGGCUA
AGUACGCCCC
COVE score: 3.81
(Recommended threshold for COVE: 15)
64 Contig2999: 699 803
GGCAACUGAC GUCUAAU GUUGUAGACAGUA AUGAU UGCGUUGGUGAUU AA UCCGCUGACCAACGU GGUGACCAACGUG GUGAC CAAUGU
GCUGAC CAAUGUGCUG
COVE score: 5.79
(Recommended threshold for COVE: 15)