Resultados genewise

	genewise $Name: wise2-2-0 $ (unreleased release)
	This program is freely distributed under a GPL. See source directory
	Copyright (c) GRL limited: portions of the code are from separate copyright

	Query protein:       SP4_P.falciparum
	Comp Matrix:         blosum62.bla
	Gap open:            12
	Gap extension:       2
	Start/End            default
	Target Sequence      Contig3965:subseq(3000,3000)
	Strand:              forward
	Start/End (protein)  default
	Gene Paras:          human.gf
	Codon Table:         codon.table
	Subs error:          1e-05
	Indel error:         1e-05
	Model splice?        model
	Model codon bias?    flat
	Model intron bias?   tied
	Null model           syn
	Algorithm            623

	genewise output
	Score 15.44 bits over entire alignment
	Scores as bits over a synchronous coding model

	Warning: The bits scores is not probablistically correct for single seqs
	See WWW help for more info

	SP4_P.falciparu   16 FTTKNIIYIFIGISLLIFIYKILKKN                        
	                     F  ++ I  F GI + +  Y+IL+ N                        
	                     FVLRSHISEFYGIRIRLCRYEILQIN                        
	Contig3965:subs 2581 tgcatcatgttgaaacttctgatcaa                        
	                     tttgcatcatagtgtgtggaattata                        
	                     ccagttaggttacatcgtgtaaaact                        


	//








	genewise $Name: wise2-2-0 $ (unreleased release)
	This program is freely distributed under a GPL. See source directory
	Copyright (c) GRL limited: portions of the code are from separate copyright

	Query protein:       dbj|BAD98262.1|
	Comp Matrix:         blosum62.bla
	Gap open:            12
	Gap extension:       2
	Start/End            default
	Target Sequence      Contig4175.0:subseq(58500,3000)
	Strand:              forward
	Start/End (protein)  default
	Gene Paras:          human.gf
	Codon Table:         codon.table
	Subs error:          1e-05
	Indel error:         1e-05
	Model splice?        model
	Model codon bias?    flat
	Model intron bias?   tied
	Null model           syn
	Algorithm            623

	genewise output
	Score 53.52 bits over entire alignment
	Scores as bits over a synchronous coding model

	Warning: The bits scores is not probablistically correct for single seqs
	See WWW help for more info

	dbj|BAD98262.1|   39 FIKFLAPW-GHCKKMKPDWDSLASTFEDSKKVLIADVDCTTGGKPLCEK 
	                     +I F APW GHCK ++P+W  +A T+ D   V +  VD T     L ++ 
	                     LIMFFAPWCGHCKALEPEWRRMA-TIAD--RVTVGSVDATVN-TALAQR 
	Contig4175.0:su 1139 caattgcttgctagcgcgtccag aagg  cgaggtgggaga agtgcc 
	                     tttttccgggagactacagggtc ctca  gtctgctaccta cctcag 
	                     gagccctgtcccgagggagtcgt tcat  agcctcgcctac gggggc 


	dbj|BAD98262.1|   87 YGVRGYPTIKYFNPPDEEGED----YKGGRSLDELKKFAENE---LGPG 
	                     YGV+GYPTI  + P   +G      Y G R  +++  FA+     +GP  
	                     YGVKGYPTIVLL-PQGPKGPSKAIPYNGARKAEDILAFAKRHYRNMGPP 
	Contig4175.0:su 1274 tggagtcaagcc ccgcagctagactaggcagggacgtgacctcaagcc 
	                     agtagacctttt cagcagccactcaagcgacaattctcagaagatgcc 
	                     cccgtctacgtt ggttgcccggctcccgcatgccttccgtcctcgcct 


	dbj|BAD98262.1|  129 CSVDLMDNCSEEQKGKL                                 
	                       V+ +D+  +   G L                                 
	                     VHVNSFDDLKQRCSGPL                                 
	Contig4175.0:su 1418 gcgaatggcacctagcc                                 
	                     tatagtaataaggggct                                 
	                     gtgcccttgagtccgat                                 


	//