Alineamiento TR1
Query= SPP00000034_1.0 # Protein # Thioredoxin reductase 1 (TR1) #
Homo sapiens # Complete
(499 letters)
Database: B_bigemina.contigs.fa
4396 sequences; 19,733,690 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Contig4075 177 2e-95
Contig3884 64 4e-17
Contig4130 56 1e-11
>Contig4075
Length = 25623
Score = 177 bits (449), Expect(3) = 2e-95, Method: Composition-based stats.
Identities = 110/270 (40%), Positives = 157/270 (58%), Gaps = 5/270 (1%)
Frame = +2
Query: 103 EAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATG 162
+ VQN+I LN+ YR L K V Y NA + + T+ KG++ A+ LIA G
Sbjct: 19277 QTVQNYIKMLNFSYRSGLMSKNVEYVNAMASLADKNTVTYTDKKGEKHQIKAKNVLIAIG 19456
Query: 163 ERPRYLGIPGDK----EYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTV 218
RP IP D +Y I+SDDL S GKTL+VG S+VALECAGFL +G DVTV
Sbjct: 19457 ARPT---IPSDVKGAWDYSITSDDLMSRKEPVGKTLIVGGSFVALECAGFLTSMGYDVTV 19627
Query: 219 MVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEE 278
VRS++LRGFD+ A+K+ E M G KF VP + ++E GRL + +S+
Sbjct: 19628 AVRSLILRGFDRQCADKVQELMLATGTKFKNGVVPQAITKLEN---GRLYIEFTDGSSD- 19795
Query: 279 IIEGEYNTVMLAIGRDACTR-KIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILE 337
E++T+M A GR +R + L VG+K +E GKI + ++ +T+V +YA+GD++E
Sbjct: 19796 ----EFDTLMYATGRSVSSRMQKELSDVGIKFSE-YGKI-IAEDGKTSVEGVYAVGDVVE 19957
Query: 338 DKVELTPVAIQAGRLLAQRLYAGSTVKCDY 367
L PVA++ G LLA+R++ S K +
Sbjct: 19958 GNPALAPVAVKDGELLARRIFGNSDKKVGF 20047
Score = 110 bits (276), Expect(3) = 2e-95, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 14/144 (9%)
Frame = +3
Query: 362 TVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNK- 420
T + D +P VFTP EY CG+SEE A + +GE+ +VY + LE+ R+ +
Sbjct: 20067 TSQLDLNYIPMCVFTPYEYARCGISEETASKLYGED-FDVYLKEYTTLEFAAVHREKVES 20243
Query: 421 -------------CYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDS 467
C +K+IC K + VVG H +GPNAGE+ QG A++ G+TK+++D
Sbjct: 20244 LRADEFDVDMPPTCLSKMIC--KKDGTVVGLHFVGPNAGEIMQGLCMAVRKGITKEEIDD 20417
Query: 468 TIGIHPVCAEVFTTLSVTKRSGAS 491
TIGIHP AE F L+VTK+SG S
Sbjct: 20418 TIGIHPTDAESFVNLTVTKKSGES 20489
Score = 101 bits (252), Expect(3) = 2e-95, Method: Composition-based stats.
Identities = 54/90 (60%), Positives = 63/90 (70%)
Frame = +3
Query: 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 72
YD +IGGG GGLAAAKEAA G K ++ D+V P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 18972 YDFAVIGGGCGGLAAAKEAASLGAKTILFDYVRPSPRGTTWGLGGTCVNVGCIPKKLMHY 19151
Query: 73 AALLGQALQDSRNYGWKVEETVKHDWDRMI 102
A +LG + D GW E HDW R++
Sbjct: 19152 AGILGHSSHDREALGWGNHEG-PHDWGRLV 19238
>Contig3884
Length = 22305
Score = 64.3 bits (155), Expect(2) = 4e-17, Method: Composition-based stats.
Identities = 64/254 (25%), Positives = 115/254 (45%), Gaps = 3/254 (1%)
Frame = +2
Query: 229 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVM 288
DQD++ I + +E+ GI+ V + + + VV N ++I E + + V+
Sbjct: 3725 DQDVSATIKKLIEKQGIE-----VSVSTKVLGGEAKEDCAVVTAEKNGQKI-EFKGDVVL 3886
Query: 289 LAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILEDKVELTPVAI 347
LA+GR T +GLE +G+K + G I V D+ + N P I AIGD++ + L A
Sbjct: 3887 LAMGRRPFTSNLGLENLGIKT--ERGCIVVDDKLRIPNHPNISAIGDVIPGPM-LAHKAE 4057
Query: 348 QAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFW 407
+ G + + ++ +VP ++T E G S E++++ G Y +
Sbjct: 4058 EDGSVALGNILGKDLGHVNWNHVPMVIYTHPEVAGVG-STEQSLKAAGV----AYKKASF 4222
Query: 408 PLEWTIPSR--DNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQL 465
P SR + KI+ + ++ +++G ++GP A E+ + CGLT +
Sbjct: 4223 PFAANSRSRVAGETDGFVKILAD--NDNKILGGWIIGPQASELIGQITLMMACGLTTVDV 4396
Query: 466 DSTIGIHPVCAEVF 479
HP +E
Sbjct: 4397 SKVCFAHPTISEAL 4438
Score = 41.6 bits (96), Expect(2) = 4e-17, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = +1
Query: 111 SLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATG-ERPRYLG 169
+L+ G + ++ V + + +G + P+ I+ +G EK+ +A+ +IATG E R+ G
Sbjct: 3334 TLDAGIKGLFKKNGVDFISGHGTLVAPNEIQI---EGGEKV-TAKNIIIATGSEVTRFPG 3501
Query: 170 --IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM 219
+ D + ISSD+ L P +V+G + LE A + +G VT++
Sbjct: 3502 DSLKIDGKRIISSDEALMLDEVPKTMVVIGGGAIGLELASVWSRLGAKVTIV 3657
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = +2
Query: 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 70
YDL +IGGG GG A + AQ+G KV +D R LGGTC+NVGCIP K +
Sbjct: 2819 YDLAVIGGGPGGYTTAIKGAQHGLKVACID--------RRKTLGGTCLNVGCIPSKCL 2968
>Contig4130
Length = 53027
Score = 45.4 bits (106), Expect(2) = 1e-11, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = -1
Query: 229 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVM 288
DQD++ I + +E+ GI+ V + + + VV N ++I E + + V+
Sbjct: 452 DQDVSATIKKLIEKQGIE-----VSVSTKVLGGEAKEDCAVVTAEKNGQKI-EFKGDVVL 291
Query: 289 LAIGRDACTRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILEDKVELTPVAI 347
LA+GR T +GLE +G+K + G I V D+ + N P I AIGD++ + L A
Sbjct: 290 LAMGRRPFTSNLGLENLGIKT--ERGCIVVDDKLRIPNHPNISAIGDVIPGPM-LAHKAE 120
Query: 348 QAGRLLAQRLYAGSTVKCDYENVPTTVFTPLEYGACG 384
+ G + + ++ +VP ++T E G
Sbjct: 119 EDGSVALGNILGKDLGHVNWNHVPMVIYTHPEVAGVG 9
Score = 41.6 bits (96), Expect(2) = 1e-11, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Frame = -3
Query: 111 SLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATG-ERPRYLG 169
+L+ G + ++ V + + +G + P+ I+ +G EK+ +A+ +IATG E R+ G
Sbjct: 843 TLDAGIKGLFKKNGVDFISGHGTLVAPNEIQI---EGGEKV-TAKNIIIATGSEVTRFPG 676
Query: 170 --IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM 219
+ D + ISSD+ L P +V+G + LE A + +G VT++
Sbjct: 675 DSLKIDGKRIISSDEALMLDEVPKTMVVIGGGAIGLELASVWSRLGAKVTIV 520
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = -1
Query: 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 70
YDL +IGGG GG A + AQ+G KV +D R LGGTC+NVGCIP K +
Sbjct: 1358 YDLAVIGGGPGGYTTAIKGAQHGLKVACID--------RRKTLGGTCLNVGCIPSKCL 1209