Alineamiento SelV
Query= SPP00000029_1.0 # Protein # Selenoprotein V (SelV) # Homo
sapiens # Complete
(346 letters)
Database: B_bigemina.contigs.fa
4396 sequences; 19,733,690 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Contig4158 41 0.001
Contig4092 31 0.84
Contig4160 31 0.89
Contig4091.1 31 0.91
>Contig4158
Length = 87318
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Frame = +2
Query: 66 PAQIPTLVPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNPTPVPTPAR-----TLTPPV 120
P ++P VP A VP P PA +P P R P +PAR T T P
Sbjct: 22391 PDRVPVQVPAAAHVH----VPAPVPARVPVSATATSPARVHVPAASPARATVSATATSPA 22558
Query: 121 R--VPAPAPAQLLAGIRAALPVLDS 143
R VPAP PA+ +R +PV S
Sbjct: 22559 RVHVPAPVPAKSAGVVRQQVPVPSS 22633
>Contig4092
Length = 35044
Score = 30.8 bits (68), Expect = 0.84, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 21 ASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSP 54
++ P TP PL T P T P+ + P TP P
Sbjct: 24383 STKPAETPKPLSTTKPAETPKPLGNVKPAETPKP 24282
>Contig4160
Length = 71491
Score = 30.8 bits (68), Expect = 0.89, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 7 TPAPS-SARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPA 65
TP PS S ++S S + S TP P + P T T P + P+ ++ + +TP
Sbjct: 58215 TPKPSESTKSSVSAKVSV---TPKPSESAKPSETAKVSLTPKPSESAKPSESATVSVTPN 58385
Query: 66 PAQIPTLVPT 75
+ IP LV T
Sbjct: 58386 ESAIPQLVVT 58415
>Contig4091.1
Length = 11179
Score = 30.8 bits (68), Expect = 0.91, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 30/74 (40%)
Frame = +2
Query: 123 PAPAPAQLLAGIRAALPVLDSYLAPALPLDPPPEPAPELPLLPEEDPEPAPSLKLIPSVS 182
PA AP + V D+ APA ++ APE P+ E P P+ P +
Sbjct: 1418 PAEAPKETTGCCSTPEKVADTPQAPATTVEASSTGAPEKPVEMTESPAATPTSTAEPGIP 1597
Query: 183 SEAGPAPGPLPTRT 196
+ G A G T T
Sbjct: 1598 TAPGDASGLRGTST 1639