Alineamiento SLA/LP
Query= gi|45550694|ref|NP_649556.2| CG1427 CG1427-PA, isoform A
[Drosophila melanog
(448 letters)
Database: B_bigemina.contigs.fa
4396 sequences; 19,733,690 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Contig3744 33 0.31
Contig3897 33 0.33
Contig3683.0 32 0.60
Contig2932 32 0.79
Contig854 32 0.81
Contig1362 31 0.88
Contig846 31 0.97
>Contig3744
Length = 5928
Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +3
Query: 113 LLARLTNALI--LDLIRGIGLPSC-----AGCFL--VPMCTGMTLTLCLQSLRKRRPGAR 163
L+ARLT L L L G LP C A C + + +C G +L LCL + PGAR
Sbjct: 2316 LVARLTLRLCASLALCLGARLPLCLVASLARCLVASLALCPGASLALCLVACLALWPGAR 2495
Query: 164 YVLWSRIDQKSCFKAITATGLVPVVIPCLI 193
L+ C A LV CL+
Sbjct: 2496 LALFLVARLARCLVARLTRCLVASSTRCLV 2585
>Contig3897
Length = 12828
Score = 32.7 bits (73), Expect = 0.33, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = -2
Query: 123 LDLIRGIGLPSCAGCFL-------VPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSC 175
L L G LP C G L + +C G L LCL + R GAR L S +D
Sbjct: 5594 LALCLGARLPLCLGACLALCLVASLALCLGARLALCLGARSTRCLGARLALSSIVDSSLN 5415
Query: 176 FKAITATG 183
AI TG
Sbjct: 5414 LNAIQFTG 5391
>Contig3683.0
Length = 4137
Score = 32.0 bits (71), Expect = 0.60, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 31/69 (44%)
Frame = -3
Query: 131 LPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCFKAITATGLVPVVIP 190
LP C C +P C G TLTLCL GAR L C +A A LV +
Sbjct: 3607 LPLCL-CASLPRCLGATLTLCL--------GARSTLCLGASLPLCLRARLAPCLVARLAL 3455
Query: 191 CLIKGESLN 199
CL+ +L+
Sbjct: 3454 CLVASLALS 3428
>Contig2932
Length = 11681
Score = 31.6 bits (70), Expect = 0.79, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 42/106 (39%), Gaps = 5/106 (4%)
Frame = -1
Query: 132 PSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCFKAITATGLVPVVIPC 191
P C G +C G TLT CL + GA L C A +A LV + C
Sbjct: 6803 PLCLGAS-SALCLGATLTRCLVASLALCLGASSALCLVARSPRCLSARSALSLVASLPLC 6627
Query: 192 LIKGESLNTNVDLFREKIKS----LGVDSILCL-YTTTSCFAPRNS 232
L +L L R + S LG S LCL T T C R++
Sbjct: 6626 LDASLALCLGATLTRCLVASLALCLGASSALCLGATLTLCLGARST 6489
>Contig854
Length = 2089
Score = 31.6 bits (70), Expect = 0.81, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -3
Query: 112 TLLARLTNALI--LDLIRGIGLPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSR 169
+LLARLT L+ L L L C G L P+C G TLCL + GAR L
Sbjct: 782 SLLARLTRCLVASLALCLCARLALCLGASL-PLCLGAWSTLCLGASLALCLGARLALCLG 606
Query: 170 IDQKSCFKAITATGLVPVVIPCLI 193
C A A LV + CL+
Sbjct: 605 ASLPRCLVARLALCLVARLPRCLV 534
>Contig1362
Length = 9418
Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -3
Query: 132 PSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSCFKAITATGLVPVVIPC 191
P+ C +P+C G +LTLCL + GAR L C A + LV + C
Sbjct: 6365 PNDGSCASLPLCLGASLTLCLGASLALCLGARLALCLGASLPLCLVACLSR*LVASLARC 6186
Query: 192 LIKGESL 198
L+ +L
Sbjct: 6185 LVASLAL 6165
>Contig846
Length = 1960
Score = 31.2 bits (69), Expect = 0.97, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 113 LLARLTNALILDLIRGIG--LPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVL 166
L+A L L+ L R +G LP C G L P C G +L LCL + R GA L
Sbjct: 934 LIASLPLCLVASLPRCLGACLPRCLGARL-PRCLGASLALCLSASLPRCLGASLAL 770