CLUSTAL W (1.81) Multiple Sequence Alignments



Sequence type explicitly set to Protein
Sequence format is Pearson
Sequence 1: subseq_8000_4000_.[1811_3967].      719 aa
Sequence 2: EFsec_2                             935 aa
Start of Pairwise alignments
Aligning...


Sequences (1:2) Aligned. Score: 42.6982
(Partial alignment)
Sequences (2:2) Aligned. Score: 90.8021
Guide tree        file created:   [clustalw.dnd]
Start of Multiple Alignment
There are 1 groups
Aligning...
Group 1: Sequences:   2      Score:5465
Alignment Score 2101
CLUSTAL-Alignment file created  [clustalw.aln]
clustalw.aln

CLUSTAL W (1.81) multiple sequence alignment


subseq_8000_4000_.[1811_3967].      MINVNIGVLGHVDSGKTSLCRCLSEVLSTCALDKHRQSQEKGITIDLGFS
EFsec_2                             MININVGVLGHVDSGKTSLCKCLSQVLSTCALDKHKESKERGITIDLGFS
                                    ***:*:**************:***:**********::*:*:*********

subseq_8000_4000_.[1811_3967].      SFYIKKKK-------------SQTSTSQTTTSQNQHGEIQNNKIVPKHGP
EFsec_2                             SFYIKKKKKKKYDVNQKREIQTNLLNDQTTDQKESFLYCKREEKNDLHNI
                                    ********             ::  ..*** .::..   :.::    *. 

subseq_8000_4000_.[1811_3967].      NKNECIPDQNDVKKEDINNDCEIENIQNISDENELIQICLVDCPGHHSLI
EFsec_2                             QYDKTNIEYNEEQNCYDYTNDKHHSNNIYFYDEEIIQICLVDCPGHHSLL
                                    : ::   : *: ::    .: : .. :    ::*:**************:

subseq_8000_4000_.[1811_3967].      KCIVMGAKIMDMIFLVIDINKGIQKQTIECLVLCQFVKSDIIIILNKIDL
EFsec_2                             KSIIMGSEITDIIILVIDINKGIQKQTIECLVLCKIINCDIIIVLNKIDL
                                    *.*:**::* *:*:********************::::.****:******

subseq_8000_4000_.[1811_3967].      IPLHEREKKINTMKKKIKDAINRTS-LKKLSYYIVSLSANKKNQ------
EFsec_2                             IPLHLREKKINLMKKKIQEAFYKFKSLQSLNYHIVSISANVKGKDNKDVE
                                    **** ****** *****::*: : . *:.*.*:***:*** *.:      

subseq_8000_4000_.[1811_3967].      --------------------------------------------------
EFsec_2                             GDPPNLLSHDKKGVKILLSGDNKDLPILLSDDKKDPPILLNDDKKDPPNL
                                                                                      

subseq_8000_4000_.[1811_3967].      -----------------------NDNEKIDHVEIEENAISMCRNNPNEIN
EFsec_2                             LNDDKKDPPNLLNDDKKDPPNLLNDDKKDPSILLSDDKKDPPNLLNDDKK
                                                           **::*   : :.::  .  .   :: :

subseq_8000_4000_.[1811_3967].      PRFNILKKEK--------------------------HTSENINELIELLK
EFsec_2                             DPPNLLNDDKKDPSILLNDHMNEWSQNKSSSDIPFMNKTINIKEIINVLT
                                       *:*:.:*                          :.: **:*:*::*.

subseq_8000_4000_.[1811_3967].      SVIKIPVRETNPSFEDFYFLYDHSFEIKGKGMVYTGTVIKGKITINSNIS
EFsec_2                             NIIKIPEREIS-TYEDFYFLYDHSFNIKGKGTIFTGTVIKGKIKINCNVT
                                    .:**** ** . ::***********:***** ::*********.**.*::

subseq_8000_4000_.[1811_3967].      ILPLNIKGKIKDIQSFKKKQKEGTSGNRLSFLISHDNIKNLKKVERGIIV
EFsec_2                             ILPLNETGKIKEIQSFKKNVHEGKKGSRLSLLILNNNIKNIKKNERGVII
                                    ***** .****:******: :**..*.***:** ::****:** ***:*:

subseq_8000_4000_.[1811_3967].      HEKSNICNFTVFICKIKLIEFYKKSIKNKELLTCIIGFASSHSYGFFFKK
EFsec_2                             YENSNISYFSMFICKVKQVEFYKKDLNNLEHFICIIGFSSTECYGYFFKK
                                    :*:***. *::****:* :*****.::* * : *****:*:..**:****

subseq_8000_4000_.[1811_3967].      LK------------------------------------------------
EFsec_2                             IKNKYETNESKKINYKENSQGHDVFPTLLEDTLNVDKRFDRKGNYLLINK
                                    :*                                                

subseq_8000_4000_.[1811_3967].      ---TDPEKEQTINGHNNGHNNGHNNGHSNGHSNGHNN-------------
EFsec_2                             LCYDDTQKENNNNNKKNKKNNNNKKNKKNGNKNEHSDDIIKNEHGEDINK
                                        *.:**:. *.::* :**.:::.:.**:.* *.:             

subseq_8000_4000_.[1811_3967].      ---------------GHSNGHSNGHNNEQNNGQNNGERDSTCLSNNIGFD
EFsec_2                             NEHSDDNNKNEHGDDNNKNEHGDYINNNHLNDYINNNHLNDDVNNNHLND
                                                   .:.* *.:  **:: *.  *.:: .  :.**   *

subseq_8000_4000_.[1811_3967].      RNGNYLIIDEVEYLNHINDETVS---------------ENDLFEDEKDEE
EFsec_2                             DVNNSHLNDDVNN-NHLNDDVNNNHLNDDVNNNHLNDDVNNSHLNNYDDD
                                      .*  : *:*:  **:**:. .                *: . :: *::

subseq_8000_4000_.[1811_3967].      IYFLVILKKKMYGFNGEKCIFLKNDENINCRICLHGNIVDIIKDSAINSQ
EFsec_2                             IYFLVVMKRKIHCFENEKCIFLKNDEHTNCRICLYGEIIEIIDNNCTYKK
                                    *****::*:*:: *:.**********: ******:*:*::**.:..  .:

subseq_8000_4000_.[1811_3967].      INNSTFVMNKKPCLNEHEDYKNLKIMKEKEKIGLIEKVIDNTTLLCKNVF
EFsec_2                             DD--SFVFNKQPNIYKYEEYKDLKILKEKNKKGNIDKIIDEHTIICKKLF
                                     :  :**:**:* : ::*:**:***:***:* * *:*:**: *::**::*

subseq_8000_4000_.[1811_3967].      TSSNQVTAYLTQKIYLIPLEHQKNK------NVCKTATIGYIAKSFAKNG
EFsec_2                             QSSNQVIPYIYKKIYIVKSTYDQKNGNTTSGNTSNVLHTGTIIKPFAKQG
                                     ***** .*: :***::   :::::      *..:.   * * *.***:*

subseq_8000_4000_.[1811_3967].      KFIVHFDDDISHIKDNIKSYIIMIKYYKDIFTKKKIFM
EFsec_2                             KAIVSFDEDISYLKNDIKSYNFLLVYYKDVFSKKKVFL
                                    * ** **:***::*::**** ::: ****:*:***:*:
clustalw.dnd

(subseq_8000_4000_.[1811_3967].:0.28651,EFsec_2:0.28651);