TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000057_1.0 # Protein # Selenoprotein 15 (Sel15) # Caenorhabditis elegans # Complete (152 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done ***** No hits found ****** TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000058_1.0 # Protein # Selenoprotein K (SelK) # Caenorhabditis elegans # Complete (110 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Plasmodium_yoelii_yoelii_str._17XNL|MALPY00529|2002-09-10|ds-DNA... 26 3.4 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00529|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 28652 Score = 25.8 bits (55), Expect = 3.4, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -1 Query: 17 GIVEMIVGFFTFIMLFFRSLLGF 39 G +VGFF + FFR L GF Sbjct: 23528 GFFRHLVGFFRHLAGFFRHLAGF 23460 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000059_1.0 # Protein # Selenoprotein R (SelR) # Caenorhabditis elegans # Complete (152 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Plasmodium_yoelii_yoelii_str._17XNL|MALPY00782|2002-09-10|ds-DNA... 29 0.74 Plasmodium_yoelii_yoelii_str._17XNL|MALPY02051|2002-09-10|ds-DNA... 27 2.5 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00059|2002-09-10|ds-DNA... 26 7.9 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00573|2002-09-10|ds-DNA... 26 8.7 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00782|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 5703 Score = 29.3 bits (64), Expect = 0.74, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -1 Query: 39 YRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWP 87 Y + + G TG F K ++CL CG ++ K A CG+P Sbjct: 5355 YYLKYKMGKAGKGTGSFGKRNGKSHFLCLRCGKRSYHLQKKRCASCGYP 5209 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY02051|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 2756 Score = 27.3 bits (59), Expect = 2.5, Method: Composition-based stats. Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 55 FNDHFEKGRYVCLCCGSEL 73 F +F+ YV LCCGSEL Sbjct: 1818 FGSNFDHNFYVVLCCGSEL 1874 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00059|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 7716 Score = 25.8 bits (55), Expect = 7.9, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +3 Query: 51 HTGGFNDHFEKGRYVCLCCGSEL 73 +TG N HF G Y CL G+ + Sbjct: 3480 NTGDINKHFNVGTYTCLLDGANI 3548 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00573|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 4317 Score = 25.8 bits (55), Expect = 8.7, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = -3 Query: 116 CKTCDAHLGHVFNDGPKETTGERYCINSVC 145 CK C H+ + FN T+ YC ++ C Sbjct: 2692 CKDCGIHMENPFNLNNSSTSSVLYCNDNTC 2603 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000060_1.0 # Protein # Selenoprotein T1 (SelT1) # Caenorhabditis elegans # Complete (258 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Plasmodium_yoelii_yoelii_str._17XNL|MALPY00761|2002-09-10|ds-DNA... 30 1.0 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01442|2002-09-10|ds-DNA... 27 7.1 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00761|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 16664 Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = +1 Query: 129 EGANFAPVLWKAYVAQALSFVKMAVLVLVLGGINPFERFGLGYPQILQHAHGNKMSSC 186 E F ++W Q F+K L+L INP FGL Y IL H + + +C Sbjct: 9421 ELVEFMLIIW-----QYSPFIKYYSPSLILQNINPEITFGLVYSPILSKLHHSCIPTC 9579 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01442|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 12204 Score = 27.3 bits (59), Expect = 7.1, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 Query: 86 PTAVHHAKDLPTLRIFYCVSCGYKQAFDQF 115 PT+ H A LPT FY +S Y + F ++ Sbjct: 2650 PTSTHFAPLLPTYSHFYPLSASYFRRFGEY 2739 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000061_1.0 # Protein # Selenoprotein T2 (SelT2) # Caenorhabditis elegans # Complete (216 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Plasmodium_yoelii_yoelii_str._17XNL|MALPY00271|2002-09-10|ds-DNA... 28 2.8 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01864|2002-09-10|ds-DNA... 27 6.4 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00270|2002-09-10|ds-DNA... 27 9.9 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00271|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 33877 Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = -2 Query: 145 YPQILQTAHYNRFSYSLLVFMIGNLFESTLSSTGAF 180 Y I++ +HY YSL+ F+ NLF ++ F Sbjct: 6828 YKAIIRRSHYKNLYYSLIFFLWNNLFHHLFFASAFF 6721 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01864|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 6451 Score = 26.9 bits (58), Expect = 6.4, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = +1 Query: 25 KEPPAEDSRLEDYLSSELETTAIPTVVN---ENSHSQDVVDSGFSKDLPKLT 73 K+ P R D S +L+ T N +N+ ++DVVDS LPK+T Sbjct: 4885 KDTPKARRRKNDNNSHKLDNEQKNTSNNNEIKNAENKDVVDSNNQHCLPKIT 5040 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00270|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 20844 Score = 26.6 bits (57), Expect = 9.9, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 71 KLTILYCVSCGYKQAFNQFYEFAKEKY 97 KL ILY +SC K F ++FAK Y Sbjct: 17388 KLFILYYISC*IKNMFYNSHQFAKNMY 17308 TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000062_1.0 # Protein # Selenoprotein U (SelU) # Caenorhabditis elegans # Complete (219 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done ***** No hits found ****** TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000063_1.0 # Protein # Thioredoxin reductase 1 (TR1) # Caenorhabditis elegans # Complete (667 letters) Database: genome.fa 2960 sequences; 20,171,213 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Plasmodium_yoelii_yoelii_str._17XNL|MALPY00659|2002-09-10|ds-DNA... 417 e-117 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00317|2002-09-10|ds-DNA... 126 3e-29 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01482|2002-09-10|ds-DNA... 101 1e-21 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00156|2002-09-10|ds-DNA... 48 2e-05 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01746|2002-09-10|ds-DNA... 41 0.002 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00318|2002-09-10|ds-DNA... 30 2.8 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00659|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 14426 Score = 417 bits (1073), Expect = e-117, Method: Composition-based stats. Identities = 225/505 (44%), Positives = 306/505 (60%), Gaps = 18/505 (3%) Frame = -2 Query: 170 DHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVGCIPKKL 229 ++ YD IVIGGG GG+A+AKEA+ G KV DFVKPS QGT WG+GGTCVNVGC+PKKL Sbjct: 13339 NYDYDYIVIGGGPGGMASAKEAASHGAKVLLFDFVKPSSQGTKWGIGGTCVNVGCVPKKL 13160 Query: 230 MHQASLLGHSIH-DAKKYGWKLPEGKVEHQWNHLRDSVQDHIASLNWGYRVQLREKTVTY 288 MH A +G D+ KYGW+ ++H WN L +VQ HI SLN+ Y V L+ V Y Sbjct: 13159 MHYAGNMGTLFKSDSDKYGWEC--DNLKHDWNKLVSTVQSHIRSLNFSYMVGLKSSKVKY 12986 Query: 289 INSYGEFTGPFEISATNK--KKKVEKLTADRFLISTGLRPKYPE-IPGVKEYTITSDDLF 345 IN + +S K K + +T LI+TG RP P+ + G KE +ITSDD+F Sbjct: 12985 INGLAKLKDKNTVSYYLKGDTSKEDCVTGKYILIATGCRPNIPDDVIGAKELSITSDDIF 12806 Query: 346 QLPYSPGKTLCVGASYVSLECAGFLHGFGFDVTVMVRSILLRGFDQDMAERIRKHMIAYG 405 L +PGKTL VGASYV+LECAGFL+ G D T+ VRSI+LRGFDQ A +I+ +M G Sbjct: 12805 SLKKNPGKTLVVGASYVALECAGFLNSLGCDTTISVRSIILRGFDQQCANKIKLYMEEQG 12626 Query: 406 MKFEAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILMAIGREAVTD 465 + F GV + +K ++ K V + N T E+ ++T+L AIGR+ D Sbjct: 12625 VTFMCGV------LPKKLTKENDKILVHF---NNNTTEL------FDTVLYAIGRKGDID 12491 Query: 466 DVGLTTIGVERAKSKKVLGRREQS-TTIPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIF 524 + L + + + + + S T IP ++A+GD+ E PEL PVAI+AG +L RR+F Sbjct: 12490 GLNLEKLNININNNNNKIITDKFSCTNIPNIFAVGDIAENVPELAPVAIKAGEILARRLF 12311 Query: 525 DGANELTEYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTISER-- 582 +NE+ +Y+ IPT+++TP+EYG CG SEE A ++GK+NI I+ FN LE + R Sbjct: 12310 KNSNEIMKYNLIPTSIYTPIEYGSCGYSEEQAYEQFGKNNIEIFLQEFNNLEISAVHRTK 12131 Query: 583 ---MDKDH--------CYLKMICLRNEEEKVVGFHILTPNAGEVTQGFGIXXXXXXXXXD 631 + KD C K++CL+NE+ +V+GFH + PNAGEVTQG + D Sbjct: 12130 HLKVQKDEYDVDISSTCLSKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALKLNAKKSD 11951 Query: 632 FDRLIGIHPTVAENFTTLTLEKKEG 656 FD IGIHPT AE+F L++ G Sbjct: 11950 FDNCIGIHPTDAESFMNLSITLSSG 11876 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00317|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 33648 Score = 126 bits (317), Expect = 3e-29, Method: Composition-based stats. Identities = 102/364 (28%), Positives = 164/364 (45%), Gaps = 40/364 (10%) Frame = +3 Query: 326 PKYPEIPGVKEYTITSDDLFQLPYSPGKTLCVGASYVSLECAGFLHGFGFDVTVMVRSI- 384 P +P + GV E+TI+SD+ F + + + +G Y+++E + G + + R Sbjct: 24828 PVFPTVKGV-EHTISSDEFFDIKEAK-RIGIIGGGYIAVELINVIKRLGIESYIFARGKR 25001 Query: 385 LLRGFDQDMAERIRKHMIAYGMKFEAGVPTRIEQIDEKTDEKAGKY----RVFWPKKNEE 440 LLR FD+ + + M + +E+I++ D+ Y R F Sbjct: 25002 LLRKFDESIVNELENDMKKNNINIIT--MANVEEIEKVHDKNLTIYLNDGRKF------- 25154 Query: 441 TGEMQEVSEEYNTILMAIGREAVTDDVGLTTIGVERAKSKKVLGRREQSTTIPWVYAIGD 500 E + ++ +GR T ++ L + + K+ ++ Q T + ++A+GD Sbjct: 25155 --------EHLDYVIYCVGRSPNTKNLNLEKLNIT-TKNDYIIVDDNQRTNLKNIFAVGD 25307 Query: 501 ---VLEGTP------------------------------ELTPVAIQAGRVLMRRIFDGA 527 V +G +LTPVAI AGR+L RIF Sbjct: 25308 CCMVKKGKELEDLNLLKLYDEQIYINNKKNDTEDSFYNVQLTPVAINAGRLLADRIFLNK 25487 Query: 528 NELTEYDQIPTTVFTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTIS--ERMDK 585 T Y IPT +F+ G GLSEE+A+ YGK+N+ IY + F L +++ E K Sbjct: 25488 TRKTNYSLIPTVIFSHPPIGTIGLSEEEAINIYGKENVKIYESKFTNLFFSVYDIEPSQK 25667 Query: 586 DHCYLKMICLRNEEEKVVGFHILTPNAGEVTQGFGIXXXXXXXXXDFDRLIGIHPTVAEN 645 + Y+K++C+ +EE + G HI+ NA E+ QGF + DFD I IHPT AE Sbjct: 25668 EKTYIKLVCV-GKEELIKGLHIIGLNADEIIQGFAVALKMNATKKDFDETIPIHPTAAEE 25844 Query: 646 FTTL 649 TL Sbjct: 25845 LVTL 25856 Score = 32.0 bits (71), Expect = 0.89, Method: Composition-based stats. Identities = 11/12 (91%), Positives = 12/12 (100%) Frame = +2 Query: 215 LGGTCVNVGCIP 226 LGGTCVNVGC+P Sbjct: 24356 LGGTCVNVGCVP 24391 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01482|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 7932 Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats. Identities = 113/470 (24%), Positives = 201/470 (42%), Gaps = 32/470 (6%) Frame = +2 Query: 215 LGGTCVNVGCIPKK-LMHQASLLGHSIHDAKKYGWKLPEGKVEHQWNHLRDSVQDHIASL 273 LGGTC+N GCIP K L+H A S + K+ G + K++ + H + + +L Sbjct: 4346 LGGTCLNRGCIPSKSLLHIAHNYYESKNKFKECGILIDNVKLDIEQVHKHKN--KCMGNL 4519 Query: 274 NWGYRVQLREKTVTYINSYGEFTGPFEISATNKKKKVEKLTADRFLISTGLRPKYPEIP- 332 G ++ V +I G I + + +K TA+R +I+TG +P EIP Sbjct: 4520 ADGISFLYKKNNVKHIIGRGSIIDGNTILVETENEGQKKYTAERIVIATGSKPI--EIPL 4693 Query: 333 ---------------GVKEY----TITSDDLFQLPYSPGKTLCVGASYVSLECAGFLHGF 373 + EY TSDD+ P +G + LE F Sbjct: 4694 KKLDDNNINDVENVKDILEYDHKLIQTSDDILNFKEIPKTMSIIGGGVIGLEIGSVFSKF 4873 Query: 374 GFDVTVMVRSILLRGF-DQDMAERIRKHMIAYGMKFEAGVPTRIEQIDEKTDEKAGKYRV 432 G DVTV + L GF D D+++ ++K + +KF ++ +E + Sbjct: 4874 GSDVTVYEYNSRLCGFLDPDVSKVLQKVLEKIKIKFMFNTSIIGGNLNTTNNEA-----I 5038 Query: 433 FWPKKNEETGEMQEVSEEYNTILMAIGREAVTDDVGLTTIGVERAKSKKV-LGRREQSTT 491 + + N +T ++++V + +L+ +GR+A +++ L + +E K+KK+ + + Sbjct: 5039 LYARDN-KTNQIKKVKSD--IVLVCVGRKANLENINLEKLSIELNKNKKIQVDEYFNVKS 5209 Query: 492 IPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELT---------EYDQIPTTVFT 542 P + AIGD ++G+ L A + G ++ +F NEL YD IP+ ++T Sbjct: 5210 QPTIKAIGDAIDGS-MLAHKAEEEGYIVADMLF---NELKNNKKKKNHINYDLIPSVIYT 5377 Query: 543 PLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEYTISERMDKDHCYLKMICLRNEEEKV 602 E G +E+ K+ + Y +V P R D+ L + + + + Sbjct: 5378 HPEVASVGYNEQKC-----KELKLNYKSVSFPFAANSRSRTIDDYDGLIKLIVEKDTNVI 5542 Query: 603 VGFHILTPNAGEVTQGFGIXXXXXXXXXDFDRLIGIHPTVAENFTTLTLE 652 +G I+ NA E+ I + ++I HPT +E + L+ Sbjct: 5543 LGSQIIGNNASELILPLSIYASHKGTSKNLSKIIYPHPTFSEVIKEVALQ 5692 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00156|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 21720 Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 83/363 (22%), Positives = 138/363 (38%), Gaps = 41/363 (11%) Frame = -1 Query: 157 KALKQDYLKEWLRDHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLG 216 K+ D K + YD+ ++G G GG AAA A KV G LG Sbjct: 20139 KSENNDTSKMEIYPDQYDVAILGCGVGGHAAAINAIEKNLKVIIF-------AGNEESLG 19981 Query: 217 GTCVNVGCIPKKLMHQASLLGHSIHDAKK---YG----------------WKLPEGKVEH 257 GTCVNVGCIP K + A+ + + K YG +L + Sbjct: 19980 GTCVNVGCIPSKALLYATNKYRELKNISKLCNYGIYSNAYIDKEKDEIKSTQLIADSICI 19801 Query: 258 QWNHLRDSVQDHIASLNWGYRVQLRE-------KTVTYINSYGEFTGPFEISATNKKKKV 310 N L++ Q+ I L G ++ ++V I +G I + KK Sbjct: 19800 NTNKLKEYTQNVIKKLKSGITHGMKNTKFNKNPQSVQVIYDHGYIINKNTIQS---KKNK 19630 Query: 311 EKLTADRFLISTGLRPKYPEIPGVKEYTI-TSDDLFQLPYSPGKTLCVGASYVSLECAGF 369 + A +++TG P P+ V T+ TSD L +G + LE + Sbjct: 19629 QLYKAKNIILATGSIPNVPQNINVDHKTVFTSDQAINLQGLQNYISIIGMGIIGLEFSDI 19450 Query: 370 LHGFGFDVTVMVRSILLRGF-DQDMAER-----IRKHMIAYGMKFEAGVPTRIEQIDEKT 423 G ++T S F D D+A+ ++ I Y + T I+ + + Sbjct: 19449 YTALGSEITFFEYSPEFLPFVDTDIAKYFENVFLKTKPINYFLN------TEIKYVHPAS 19288 Query: 424 DEK--AGKYRVFWPKKNEETGEMQEVSEEY------NTILMAIGREAVTDDVGLTTIGVE 475 + K Y + + T +++ E+ ++ L+A GR+ T+++GL + + Sbjct: 19287 NGKPVVIGYSLRTKTNPDSTASTTQINGEHVKELHVDSCLVATGRKPNTENIGLENLNAK 19108 Query: 476 RAK 478 K Sbjct: 19107 MNK 19099 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01746|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 18506 Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 29/54 (53%) Frame = -3 Query: 170 DHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNVG 223 DH YD +++G G GL +A E S+ KVAC+ + P+ T GG +G Sbjct: 4482 DHHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALG 4321 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00318|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 20734 Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 170 DHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPS 207 + YD+IVIGGG G A+ +++LG K + K S Sbjct: 17739 EKKYDVIVIGGGHSGCEASYISAKLGAKTLLITQCKES 17626 Database: genome.fa Posted date: Feb 25, 2008 11:55 AM Number of letters in database: 20,171,213 Number of sequences in database: 2960 Lambda K H 0.324 0.138 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2960 Number of Hits to DB: 33,549,916 Number of extensions: 461037 Number of successful extensions: 2026 Number of sequences better than 10.0: 38 Number of HSP's gapped: 2015 Number of HSP's successfully gapped: 40 Length of database: 6,723,737 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 43 (21.2 bits)