TBLASTN 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= SPP00000038_1.0 # Protein # Eukaryotic elongation factor (eEFSec) # Homo sapiens # Complete (596 letters) Database: yoelii.fasta 2960 sequences; 20,171,213 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Plasmodium_yoelii_yoelii_str._17XNL|MALPY00118|2002-09-10|ds-DNA... 140 2e-33 Plasmodium_yoelii_yoelii_str._17XNL|MALPY02052|2002-09-10|ds-DNA... 103 3e-22 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01697|2002-09-10|ds-DNA... 99 5e-21 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01212|2002-09-10|ds-DNA... 70 2e-12 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00104|2002-09-10|ds-DNA... 61 2e-09 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00641|2002-09-10|ds-DNA... 60 2e-09 Plasmodium_yoelii_yoelii_str._17XNL|MALPY02075|2002-09-10|ds-DNA... 46 6e-05 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01914|2002-09-10|ds-DNA... 45 1e-04 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00946|2002-09-10|ds-DNA... 40 0.003 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00260|2002-09-10|ds-DNA... 36 0.041 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00985|2002-09-10|ds-DNA... 35 0.075 Plasmodium_yoelii_yoelii_str._17XNL|MALPY02813|2002-09-10|ds-DNA... 33 0.27 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01333|2002-09-10|ds-DNA... 33 0.34 Plasmodium_yoelii_yoelii_str._17XNL|MALPY00810|2002-09-10|ds-DNA... 33 0.35 Plasmodium_yoelii_yoelii_str._17XNL|MALPY01695|2002-09-10|ds-DNA... 33 0.51 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00118|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 18636 Score = 140 bits (353), Expect = 2e-33, Method: Composition-based stats. Identities = 92/316 (29%), Positives = 149/316 (47%), Gaps = 41/316 (12%) Frame = -2 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLN 146 Q+ LVDCPGH SLI+ I+ GA+I+D++ LVID+ KG+Q Q+ ECLV+ Q ++++LN Sbjct: 9821 QICLVDCPGHHSLIKCIVMGAKIMDMIFLVIDINKGIQKQTIECLVLCQFVKSDIIIILN 9642 Query: 147 KIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAP--IIPVXXXXXXXXXXXXXXXXXIPE 204 KIDL+P +R+ I+ M KK++ + T + I+ + I E Sbjct: 9641 KIDLIPLHEREKKINTMKKKIKDAINRTSLKKLSYYIVSLSANKKNQNDNEKIDHVEIEE 9462 Query: 205 --------------------------------LIELLTSQISIPTRD--PS-GPFLMSVD 229 LIELL S I IP R+ PS F D Sbjct: 9461 NAISMCRNNPNEINPRFNILKKEKHTSENINELIELLKSVIKIPVRETNPSFEDFYFLYD 9282 Query: 230 HCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGIC 289 H F IKG+G V TGT++ G I++ ++ I L + K+K +Q F G+RL Sbjct: 9281 HSFEIKGKGMVYTGTVIKGKITINSNISILPLNIKGKIKDIQSFKKKQKEGTSGNRLSFL 9102 Query: 290 VTQFDPKLL---ERGLVCAPES-LHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVM 345 ++ + K L ERG++ +S + + ++ I +++ ++ K +G + Sbjct: 9101 ISHDNIKNLKKVERGIIVHEKSNICNFTVFICKIKLIEFYKKSIKNKELLTCIIGFASSH 8922 Query: 346 GRLMFFSPAPDNFDQE 361 FF + ++E Sbjct: 8921 SYGFFFKKLKTDPEKE 8874 Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 26/46 (56%) Frame = -2 Query: 13 LGHIDSGKXXXXXXXXXXXXXXXFDKQPQSRERGITLDLGFSCFSV 58 LGH+DSGK DK QS+E+GIT+DLGFS F + Sbjct: 10166 LGHVDSGKTSLCRCLSEVLSTCALDKHRQSQEKGITIDLGFSSFYI 10029 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY02052|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 5837 Score = 103 bits (256), Expect = 3e-22, Method: Composition-based stats. Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 16/307 (5%) Frame = +2 Query: 13 LGHIDSGKXXXXXXXXXX---------XXXXXFDKQPQSRERGITLDLGFSCFSVPLPAR 63 +GH+D GK DK P+ ++RGIT++ Sbjct: 1115 IGHVDHGKTTLTAAITKVCSKYDRGTFKSYEDIDKTPEEQKRGITIN------------- 1255 Query: 64 LRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM 123 + +DCPGH I+ +I G +D +LV+ G+ Sbjct: 1256 ------------ATHVEYETEKRHYSHIDCPGHLDYIKNMITGTSQMDGSILVVSAYDGL 1399 Query: 124 QTQSAECLVIG-QIACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPII 182 Q+ E +++ QI K++V LNKID+ + Q +D + ++++ L K+ G I Sbjct: 1400 MPQTKEHVLLSRQIGINKIIVYLNKIDMCED---QELVDLVELEVRELLSFHKYDGDNI- 1567 Query: 183 PVXXXXXXXXXXXXXXXXXIPELIELLTS---QISIPTRDPSGPFLMSVDHCFSIKGQGT 239 P +P +++LL + I P R PFLMS+D I G+GT Sbjct: 1568 PFIKGSALKALNDDPSEYGVPSILKLLDACDNYIDEPKRKIDLPFLMSIDDVLQISGKGT 1747 Query: 240 VMTGTILSGSISLGDSVEIPALK---VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPK 296 V TG + G+I + +SV+I +K + + ++MF + +A GD++G+ + Sbjct: 1748 VATGRVEQGTIKINESVDILGIKEKSIKTVITGIEMFRKTLDTAQAGDQIGVMLKNVKKN 1927 Query: 297 LLERGLV 303 + RG+V Sbjct: 1928 DISRGMV 1948 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01697|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 3439 Score = 99.0 bits (245), Expect = 5e-21, Method: Composition-based stats. Identities = 66/226 (29%), Positives = 114/226 (50%), Gaps = 11/226 (4%) Frame = -2 Query: 91 VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAE-CLVIGQIACQKLVVVLNKID 149 +DCPGH+ I+ +I GA +D+ +LVI + G+ Q+ E L+I QI + L++ LNK D Sbjct: 2820 IDCPGHSDYIKNMIIGATQMDIAILVISIIDGIMPQTYEHLLLIKQIGIKNLIIFLNKED 2641 Query: 150 LLPEGKR----QAAIDKMTKKMQKTLENTK-FRGAPIIPVXXXXXXXXXXXXXXXXXIPE 204 L + + + I+++ K L N G+ + + I + Sbjct: 2640 LCNDEELIDFIKLEINELLTKYNFDLNNIHILTGSALNVIDIIQKNKNYEVIKSNIWIQK 2461 Query: 205 LIELLT--SQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK 262 L L+ I IP R+ + F MS++ FSI G+GTV+TG I G I++ + VE+ + Sbjct: 2460 LNNLINIIDSIQIPIRNINDYFFMSIEDVFSITGRGTVVTGKIEQGCININNEVELLKFE 2281 Query: 263 ---VVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 ++ V ++MF + A GD +G+ + K ++RG++ A Sbjct: 2280 KSSILTTVIGLEMFKKQLIQAQSGDNVGVLLRNVQKKDIKRGMILA 2143 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01212|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 22131 Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats. Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 23/234 (9%) Frame = +2 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGM-QTQSAECLVIGQIACQKLVVVL 145 V+ VDCPGH L+ T++ GA ++D +L++ + Q Q++E L +I K +++L Sbjct: 1415 HVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNESCPQPQTSEHLAAVEIMRLKHILIL 1594 Query: 146 -NKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXXXIPE 204 NK++L+ E QA K ++++ + T APIIP+ I Sbjct: 1595 QNKVELIKE--EQAL--KQQEEIRNFVSGTAADSAPIIPI----------SAVLKYNIDV 1732 Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKG--------QGTVMTGTILSGSISLGDSV 256 + E + +QISIP RD M V F + QG V G+IL G + +GD + Sbjct: 1733 VCEYIVTQISIPRRDFISSPHMIVIRSFDVNKPGEDIETLQGGVAGGSILHGVLKVGDQI 1912 Query: 257 EI-PAL------------KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKL 297 EI P + ++ K+ SM + + A+ G +G+ T+ DP L Sbjct: 1913 EIRPGIISKDEKGEITCRPIISKILSMFAENNNLKYAVPGGLIGVG-TRIDPIL 2071 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00104|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 13794 Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 12/282 (4%) Frame = +2 Query: 36 FDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPG 95 DK RERGIT+D+ F P T++D PG Sbjct: 2993 LDKLKAERERGITIDIALWKFETP-------------------------RYFFTVIDAPG 3097 Query: 96 HASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNK 147 H I+ +I G D+ +LV+ G + Q+ E L+ + +++VV +NK Sbjct: 3098 HKDFIKNMITGTSQADVALLVVPAEVGGFEGAFSKEGQTKEHALLAFTLGVKQIVVGVNK 3277 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXIP-- 203 +D + + + +++ K+++ L+ ++ + IP+ Sbjct: 3278 MDTVKYSEDR--YEEIKKEVKDYLKKVGYQADKVDFIPISGFEGDNLIEKSDKTPWYKGR 3451 Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 LIE L + + P R P + + + I G GTV G + +G + G + V Sbjct: 3452 TLIEALDT-MEPPKRPYDKPLRIPLQGVYKIGGIGTVPVGRVETGILKAGMVLNFAPSAV 3628 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 V + KS++M + A GD +G V K ++RG V + Sbjct: 3629 VSECKSVEMHKEVLEEARPGDNIGFNVKNVSVKEIKRGYVAS 3754 Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 12/282 (4%) Frame = -1 Query: 36 FDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPG 95 DK RERGIT+D+ F P T++D PG Sbjct: 1566 LDKLKAERERGITIDIALWKFETP-------------------------RYFFTVIDAPG 1462 Query: 96 HASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNK 147 H I+ +I G D+ +LV+ G + Q+ E L+ + +++VV +NK Sbjct: 1461 HKDFIKNMITGTSQADVALLVVPAEVGGFEGAFSKEGQTKEHALLAFTLGVKQIVVGVNK 1282 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXIP-- 203 +D + + + +++ K+++ L+ ++ + IP+ Sbjct: 1281 MDTVKYSEDR--YEEIKKEVKDYLKKVGYQADKVDFIPISGFEGDNLIEKSDKTPWYKGR 1108 Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 LIE L + + P R P + + + I G GTV G + +G + G + V Sbjct: 1107 TLIEALDT-MEPPKRPYDKPLRIPLQGVYKIGGIGTVPVGRVETGILKAGMVLNFAPSAV 931 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 V + KS++M + A GD +G V K ++RG V + Sbjct: 930 VSECKSVEMHKEVLEEARPGDNIGFNVKNVSVKEIKRGYVAS 805 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00641|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 15964 Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 113/282 (40%), Gaps = 12/282 (4%) Frame = +2 Query: 36 FDKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPG 95 DK RERGIT+D+ F P T++D PG Sbjct: 284 LDKLKAERERGITIDIALWKFETP-------------------------RYFFTVIDAPG 388 Query: 96 HASLIRTIIGGAQIIDLMMLVIDVTKG-------MQTQSAE-CLVIGQIACQKLVVVLNK 147 H I+ +I G D+ +LV+ G + Q+ E L+ + +++VV +NK Sbjct: 389 HKDFIKNMITGTSQADVALLVVPAEVGGFEGAFSKEGQTKEHALLAFTLGVKQIVVGVNK 568 Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXIP-- 203 +D + + + +++ K+++ L+ ++ + IP+ Sbjct: 569 MDTVKYSEDR--YEEIKKEVKDYLKKVGYQADKVDFIPISGFEGDNLIEKSDKTPWYKGR 742 Query: 204 ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKV 263 LIE L + + P R P + + + I G GTV G + +G + G + V Sbjct: 743 TLIEALDT-MEPPKRPYDKPLRIPLQGVYKIGGIGTVPVGRVETGILKAGMVLNFAPSAV 919 Query: 264 VKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCA 305 V + KS++M + A GD +G V K ++RG V + Sbjct: 920 VSECKSVEMHKEVLEEARPGDNIGFNVKNVSVKEIKRGYVAS 1045 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY02075|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 11059 Score = 45.8 bits (107), Expect = 6e-05, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%) Frame = +1 Query: 87 QVTLVDCPGHASLIRTIIGG-AQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVL 145 ++T +D PGH ++ +TI Q DL++LVI G+ ++ ECL + + L++ + Sbjct: 2428 KITFLDTPGH-NVFKTIRKRCVQCTDLIILVISADDGIMNETIECLELSKKYNIPLIIAV 2604 Query: 146 NKIDLL-PEGKRQAAIDKMTKKM-QKTLENTKFRGA-PIIPV 184 NKID E + I+ ++K + Q + K G PIIP+ Sbjct: 2605 NKIDKCNSENDKMLKIENVSKSLIQYNIITEKENGQIPIIPI 2730 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01914|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 5476 Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = -2 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECL-VIGQIACQKLVVVLN 146 + ++D PGH S G+ + D+ +LVID+ G++ Q+ E + ++ Q C V+ LN Sbjct: 3156 IMIIDTPGHESFYNLRKRGSSLCDIAILVIDLMHGLEQQTKESIQILKQRNC-PFVIALN 2980 Query: 147 KIDLL 151 KID L Sbjct: 2979 KIDRL 2965 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00946|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 10425 Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 25/43 (58%) Frame = +1 Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECL 131 T +D PGH + I G +I DL +LVI G+Q Q+ EC+ Sbjct: 1822 TFIDTPGHEAFIPIRQRGIKISDLSILVISADAGIQEQTVECI 1950 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00260|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 15631 Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 32/87 (36%) Frame = -1 Query: 41 QSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGHASLI 100 Q RERGIT+ +SCF V L+D PGH Sbjct: 1288 QERERGITIKTAYSCFK-------------------------WNNINVNLIDTPGHIDFS 1184 Query: 101 RTIIGGAQIIDLMMLVIDVTKGMQTQS 127 + D ++VID +G+Q Q+ Sbjct: 1183 NETFLSLCVSDKCVIVIDAKEGLQIQT 1103 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00985|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 22503 Score = 35.4 bits (80), Expect = 0.075, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = -1 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKID 149 L+D PGH + + + +L+ID KG+Q Q+ + + K++ V+NKID Sbjct: 18777 LIDTPGHFDFYHEVKRSLNVCEGAILLIDGGKGIQAQTLNIFLEIKKHNIKIIPVINKID 18598 Query: 150 L 150 L Sbjct: 18597 L 18595 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY02813|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 2792 Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +3 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECL----VIGQIACQKLV 142 +V + D PGH L+ + + D +LV+D ++ E ++ + ++ Sbjct: 1653 KVNIFDTPGHNELVNNLHTCSFFADCAILVVDANNVYNKKNDETYRNVCILKYVGISNII 1832 Query: 143 VVLNKIDLL 151 +V+NKIDL Sbjct: 1833 IVINKIDLF 1859 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01333|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 3755 Score = 33.1 bits (74), Expect = 0.34, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -2 Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKG 122 + T++D PGH + I +I GA D+ +L+I KG Sbjct: 2473 RFTILDAPGHKNFIPNMISGAAQADIGVLIISARKG 2366 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY00810|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 11552 Score = 33.1 bits (74), Expect = 0.35, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Frame = +2 Query: 90 LVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQ-KLVVVLNKI 148 +VD PGH+ + +ID + L++DV +G + Q+ L + + K++V++NK Sbjct: 6551 IVDTPGHSDFGGEVERVLNLIDGVCLIVDVVEGPKNQTKFVLKKSLLNPKCKIIVIMNKF 6730 Query: 149 DLLPEGKRQAAID 161 D K++ I+ Sbjct: 6731 DKPSNIKKKEEIE 6769 >Plasmodium_yoelii_yoelii_str._17XNL|MALPY01695|2002-09-10|ds- DNA|Plasmodium_yoelii_TIGR Length = 14054 Score = 32.7 bits (73), Expect = 0.51, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%) Frame = -3 Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNK 147 + L+D PGH + ++ D ++V+D +G+ Q+ L K V+ +NK Sbjct: 10239 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLYQALGERIKPVLHVNK 10060 Query: 148 ID--LLPEGKRQAAIDKMTKKMQKTLEN 173 +D LL + Q ++ + + +T+E+ Sbjct: 10059 VDRALL---ELQMEVEDIYQTFARTIES 9985 Database: yoelii.fasta Posted date: Mar 4, 2008 12:01 PM Number of letters in database: 20,171,213 Number of sequences in database: 2960 Lambda K H 0.321 0.137 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 2960 Number of Hits to DB: 9,966,814 Number of extensions: 125203 Number of successful extensions: 379 Number of sequences better than 10.0: 18 Number of HSP's gapped: 373 Number of HSP's successfully gapped: 25 Length of query: 596 Length of database: 6,723,737 Length adjustment: 102 Effective length of query: 494 Effective length of database: 6,421,817 Effective search space: 3172377598 Effective search space used: 3172377598 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 46 (22.3 bits)