genewise output Score -23.07 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPS1 1 MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESLQENH + RE N SY + ++ G G KVP +VL L+ L EAKREKVN--SYIKESIEKIINRNTCGGCGSKVPSNVLSNSLKGLPM-- Plasmodium 1559 ggaagaga ttaagaagaaaacaatggtgtagctagttattagcca acagaata cataagtaattagacgggggcatccattcactagtct ggggagat gctaaccaaatcattcaatagaccacagctggagatg SPS1 50 FQEDEQFLGAVMPRLGIGMDTCVI---PLRHGGLS--LVQTTDYIYPIV + +LG + D C++ + G S LVQT D++ ++ YSSPNVYLG-----IEACDDCCIFVHSKSKKGEESPALVQTIDFFKSFI Plasmodium 1694 tatcagtcg aggtggttatgcaataagggacgcgcaagttatta agccatatg tacgaaggtttagacaagaagccttactattactt tctttgcaa taattcccatgttatagaaactattggtcccaatt SPS1 94 DDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMP DD Y++G I + LSD+Y+MG T + +L+ N +++ + + DDEYILGEIIAIHCLSDVYSMGGTGICALCVLIVKDN--IEKKLQQRLQ Plasmodium 1826 gggtatggaagactctggtaaggagatgttgcagaga agaacccatc aaaattgattctagtcatagtggcgtgctgttttaaa taaataagta ttacagggatcttcactgccgggccctcgcagtggtt tagggggggg SPS1 143 LIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTVCQ I+ G +E ++GG T +G T NILTGCCQKLKEEKCVLSGGHTCAGSENYVGLAVTG--K Plasmodium 1967 aatagttcataggatgtaggcatggagatggtggag a attcgggaataaaagttgggacgcggaaatgtctcg a ttatgccgggggggccgtgccctgttgtcccgacgg g SPS1 182 PNEFIMPDNA---VPGDVLVLTKPLG N +++P + GD+++ TK G ENYLFLPKGSGSIKAGDIIITTKMFG Plasmodium 2078 GTGAAAA Intron 1 AAGgatctccagagaaagggaaaaaaatg <0-----[2078 : 2332]-0>aaatttcaggggtacgatttccattg accgcaggacacaaggtaccggagcc SPS1 205 TQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYQEAMMNMARLNRTAAG +A H +W + E +++ ++ FGFIMAAHICKKAKARW-----------IYNCLDEMLLSN---RKSGLY Plasmodium 2411 tgtaaggcataagagat atatcggaccta aaagct tgtttccatgaacacgg taagtaatttca gaggta tcccgtatatagaacag tcccacagccat ggtgac SPS1 254 LMHTFNAHAATDITGFGILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAV L+ NA A TD+TGFG+LGH + K R E+ F + K LLQNNNAKACTDVTGFGVLGHLNEMIKCSRREIYFASQ----MGKKPLY Plasmodium 2516 ctcaaagagtaggagtggcgccagaaattaagattgtc agaacct ttaaaacacgcatcgtgttgataattagcggatatcca tgaacta tggtttcggcctatgtacacctcagcgcgggattctaa ggggccc SPS1 303 SKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQA S + + + + ++ P +K+ EG + STSHKEALDGRNNRVDDAQADKVMEPPMNLIGAK-INLKNFIIAEGVEQ Plasmodium 2651 aatcaggcggaaacggggcggagagccaacagga aacaataagggggc gccaaactaggaagtaacacaattacctattgca tataatttcagtaa caccggagcagccagttagtcgggaccgtccaag atcgccacaagtga SPS1 352 WIIGIVEKG--NRTARIIDKPRIIEVAPQVATQNVNPTPGATS I + + + + +E A + P + CIENNIFSSMYKKNHYLCNNIINMEEASLSERYGILFDPQTSG Plasmodium 2795 tagaaatttataaactttaaaaaagggtcagctgactgccaag gtaaattcctaaaaaatgaattataacctgagagtttacacgg ccattcctcgtgacccgctctatgaaccgtgctatgtcggctg // Gene 1 Gene 1559 2923 Exon 1559 2077 phase 0 Exon 2333 2923 phase 0 // >Plasmodium.[1559:2923].sp.tr EAKREKVNSYIKESIEKIINRNTCGGCGSKVPSNVLSNSLKGLPMYSSPNVYLGIEACDD CCIFVHSKSKKGEESPALVQTIDFFKSFIDDEYILGEIIAIHCLSDVYSMGGTGICALCV LIVKDNIEKKLQQRLQNILTGCCQKLKEEKCVLSGGHTCAGSENYVGLAVTGKENYLFLP KGSGSIKAGDIIITTKMFGFGFIMAAHICKKAKARWIYNCLDEMLLSNRKSGLYLLQNNN AKACTDVTGFGVLGHLNEMIKCSRREIYFASQMGKKPLYSTSHKEALDGRNNRVDDAQAD KVMEPPMNLIGAKINLKNFIIAEGVEQCIENNIFSSMYKKNHYLCNNIINMEEASLSERY GILFDPQTSG // >Plasmodium.[1559:2923].sp GAGGCGAAGAGGGAAAAGGTAAATTCGTACATTAAAGAAAGCATCGAAAAAATAATTAAC CGAAATACTTGCGGAGGATGTGGATCGAAAGTCCCCTCAAACGTATTGTCCAATTCGTTG AAAGGGCTACCTATGTATAGCTCTCCTAATGTGTACCTAGGAATTGAAGCATGTGATGAC TGCTGCATATTTGTGCATAGTAAATCTAAAAAGGGAGAAGAAAGCCCTGCACTTGTTCAG ACGATTGACTTCTTCAAATCATTTATTGATGATGAATACATATTGGGGGAGATAATTGCC ATTCATTGCCTATCCGATGTGTACAGCATGGGGGGGACCGGCATCTGTGCCTTGTGCGTA CTGATTGTGAAGGATAATATTGAAAAGAAGCTGCAGCAGAGGTTGCAGAATATTTTAACT GGGTGCTGCCAGAAGTTGAAGGAGGAGAAGTGCGTCTTGAGTGGGGGCCACACCTGTGCG GGTAGTGAGAATTACGTCGGCTTGGCAGTCACGGGGAAGGAAAACTACCTGTTCCTACCG AAGGGAAGCGGAAGCATAAAAGCGGGGGATATAATCATCACGACGAAAATGTTCGGCTTT GGCTTCATCATGGCTGCACATATATGTAAAAAGGCAAAAGCCAGATGGATTTACAACTGC CTAGACGAAATGCTCCTCTCAAATAGGAAGAGTGGGCTATACCTTTTGCAGAATAATAAT GCCAAGGCGTGCACCGATGTAACTGGGTTTGGAGTCCTAGGCCACCTTAACGAAATGATC AAGTGCTCGAGGAGGGAAATTTATTTCGCTTCACAAATGGGGAAGAAGCCCCTCTACAGC ACATCCCACAAGGAGGCACTGGACGGAAGGAACAACCGAGTGGATGATGCACAGGCTGAC AAGGTGATGGAACCCCCCATGAATCTCATCGGAGCAAAGATAAATCTCAAGAACTTCATA ATCGCAGAAGGGGTTGAGCAATGCATCGAAAATAATATCTTCTCTTCCATGTATAAGAAA AACCACTACTTGTGCAATAACATTATAAATATGGAAGAAGCCTCCCTGAGTGAGCGCTAT GGAATTCTGTTTGACCCGCAGACCAGTGGG //