TBLASTN 2.2.17 [Aug-26-2007]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= sep43_pknowlesi_cds_1
(866 letters)
Database: cds.fa
5106 sequences; 11,140,562 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Plasmodium_knowlesi_strain_H|chr14|PKH_144100|Annotation|Plasmod... 1281 0.0
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110990|An... 77 2e-14
Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_132900|Annotation|Pla... 71 1e-12
Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_050780|Annotation|Pla... 52 8e-07
Plasmodium_knowlesi_strain_H|chr14|PKH_141990|Annotation|Plasmod... 51 1e-06
Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_073120|Annotation|Pla... 48 1e-05
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|An... 48 1e-05
Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071400|Annotation|Pla... 46 5e-05
Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_093670|Annotation|Pla... 45 5e-05
Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123140|Annotat... 45 5e-05
Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080100|Annotation|Pla... 45 8e-05
Plasmodium_knowlesi_strain_H|chr14|PKH_143430|Annotation|Plasmod... 45 1e-04
Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_082150|Annotation|Pla... 44 1e-04
Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_090430|Annotation|Pla... 44 1e-04
Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Pla... 44 2e-04
Plasmodium_knowlesi_strain_H|chr14|PKH_145470|Annotation|Plasmod... 43 3e-04
Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134440|Annotation|Pla... 42 4e-04
Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060400|Annotation|Pla... 41 0.001
Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_091720|Annotation|Pla... 40 0.002
Plasmodium_knowlesi_strain_H|chr14|PKH_144160|Annotation|Plasmod... 39 0.004
Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060610|Annotation|Pla... 39 0.004
Plasmodium_knowlesi_strain_H|chr10|PKH_101550|Annotation|Plasmod... 39 0.007
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110340|An... 38 0.008
Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060680|Annotation|Pla... 38 0.012
Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092450|Annotation|Pla... 35 0.067
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111070|An... 35 0.073
Plasmodium_knowlesi_strain_H|PK4.chr03|PKH_031250|Annotation|Pla... 35 0.085
Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071810|Annotation|Pla... 35 0.087
Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123660|Annotat... 35 0.090
Plasmodium_knowlesi_strain_H|chr10|PKH_102530|Annotation|Plasmod... 35 0.090
Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_051690|Annotation|Pla... 34 0.12
Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092860|Annotation|Pla... 34 0.13
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_114310|An... 34 0.15
Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060650|Annotation|Pla... 34 0.17
Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080550|Annotation|Pla... 34 0.19
Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_051920|Annotation|Pla... 33 0.24
Plasmodium_knowlesi_strain_H|chr10|PKH_102990|Annotation|Plasmod... 32 0.50
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_113330|An... 32 0.51
Plasmodium_knowlesi_strain_H|chr14|PKH_142270|Annotation|Plasmod... 32 0.74
Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134100|Annotation|Pla... 32 0.93
Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126070|Annotat... 31 1.5
Plasmodium_knowlesi_strain_H|chr14|PKH_140580|Annotation|Plasmod... 30 1.7
Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134520|Annotation|Pla... 30 2.4
Plasmodium_knowlesi_strain_H|chr14|PKH_146750|Annotation|Plasmod... 30 2.6
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111950|An... 30 2.8
Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_094440|Annotation|Pla... 30 3.0
Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126190|Annotat... 30 3.1
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110700|An... 30 3.4
Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_114270|An... 29 5.2
Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126370|Annotat... 29 5.6
Plasmodium_knowlesi_strain_H|PK4.chr01|PKH_011400|Annotation|Pla... 28 6.7
Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_124190|Annotat... 28 7.5
Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_052710|Annotation|Pla... 28 8.8
Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_070240|Annotation|Pla... 28 9.7
>Plasmodium_knowlesi_strain_H|chr14|PKH_144100|Annotation|Plasmodium
_knowlesi_Sanger|(protein coding) polyadenylate-binding
protein, putative
Length = 2625
Score = 1281 bits (3316), Expect = 0.0, Method: Composition-based stats.
Identities = 866/866 (100%), Positives = 866/866 (100%)
Frame = +1
Query: 1 MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA 60
MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA
Sbjct: 25 MHPSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLA 204
Query: 61 DAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFG 120
DAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFG
Sbjct: 205 DAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFG 384
Query: 121 NILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERATN 180
NILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERATN
Sbjct: 385 NILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERATN 564
Query: 181 DTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYADSESAKNAM 240
DTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYADSESAKNAM
Sbjct: 565 DTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYADSESAKNAM 744
Query: 241 ENLNGKKITDDGQIDHTYDAKKEEAENANANNGTNNGIATGADANGVEGEVGKGTTVDGK 300
ENLNGKKITDDGQIDHTYDAKKEEAENANANNGTNNGIATGADANGVEGEVGKGTTVDGK
Sbjct: 745 ENLNGKKITDDGQIDHTYDAKKEEAENANANNGTNNGIATGADANGVEGEVGKGTTVDGK 924
Query: 301 GDNKVSTAGDTGKSGEETEGGANTTGATSESVKGNEGNKVESDDKANETSGVTSTDGASN 360
GDNKVSTAGDTGKSGEETEGGANTTGATSESVKGNEGNKVESDDKANETSGVTSTDGASN
Sbjct: 925 GDNKVSTAGDTGKSGEETEGGANTTGATSESVKGNEGNKVESDDKANETSGVTSTDGASN 1104
Query: 361 VKEDGASSIAANAAAQGESTNGINKKDSGSESADSPNILYVGPHQSRARRHAILKAKFDN 420
VKEDGASSIAANAAAQGESTNGINKKDSGSESADSPNILYVGPHQSRARRHAILKAKFDN
Sbjct: 1105VKEDGASSIAANAAAQGESTNGINKKDSGSESADSPNILYVGPHQSRARRHAILKAKFDN 1284
Query: 421 LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFA 480
LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFA
Sbjct: 1285LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFA 1464
Query: 481 QQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNALNSPMQY 540
QQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNALNSPMQY
Sbjct: 1465QQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNALNSPMQY 1644
Query: 541 PNPQSPQLQFNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLNFNANLR 600
PNPQSPQLQFNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLNFNANLR
Sbjct: 1645PNPQSPQLQFNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLNFNANLR 1824
Query: 601 GQMNQMRFYTQGGANMMNNSMNQNKVNAQLHPGHQYPNALGQGNPQQPNLSAPGQHNNNQ 660
GQMNQMRFYTQGGANMMNNSMNQNKVNAQLHPGHQYPNALGQGNPQQPNLSAPGQHNNNQ
Sbjct: 1825GQMNQMRFYTQGGANMMNNSMNQNKVNAQLHPGHQYPNALGQGNPQQPNLSAPGQHNNNQ 2004
Query: 661 AMQQQPANNQMLNNNMRNMNNRASRNMGAGNIANIPNQKQLPINMVGKQNTSQGSQMNHQ 720
AMQQQPANNQMLNNNMRNMNNRASRNMGAGNIANIPNQKQLPINMVGKQNTSQGSQMNHQ
Sbjct: 2005AMQQQPANNQMLNNNMRNMNNRASRNMGAGNIANIPNQKQLPINMVGKQNTSQGSQMNHQ 2184
Query: 721 GPPPPQQQQGQGSPQQQQTQQKSPQQMQQQVPPNGNFKFTSQARNRMEMPNKNANKVNAI 780
GPPPPQQQQGQGSPQQQQTQQKSPQQMQQQVPPNGNFKFTSQARNRMEMPNKNANKVNAI
Sbjct: 2185GPPPPQQQQGQGSPQQQQTQQKSPQQMQQQVPPNGNFKFTSQARNRMEMPNKNANKVNAI 2364
Query: 781 NNMNVNFNNSSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSE 840
NNMNVNFNNSSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSE
Sbjct: 2365NNMNVNFNNSSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSE 2544
Query: 841 LLILLENEEQLKKKIDEALVVLQKAK 866
LLILLENEEQLKKKIDEALVVLQKAK
Sbjct: 2545LLILLENEEQLKKKIDEALVVLQKAK 2622
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110990|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding)
Polyadenylate binding protein, putative
Length = 1179
Score = 76.6 bits (187), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 23/265 (8%)
Frame = +1
Query: 4 SFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAE 63
+F + S++V + + TE + F G ++++ + +D YAY+ +H+ +
Sbjct: 40 NFQSNSIFVYNFPTEWTENDIQNNFMIFGTINNVIIDKDINM-----YAYIQFHDGEACQ 204
Query: 64 RALDTLNYTNIKGQPARL-----------MWSHRDPSLRKSGAGN------IFVKNLDKS 106
+A++ +N + G+ ++ M S + +K+ + +FV L
Sbjct: 205 KAIEVMNGKEVSGKVLKVTNRKLVEECMDMNSTNIETPQKTQPNSENKKTTLFVFYLPPH 384
Query: 107 IDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQL-GSKN 165
+++ LFD F +FGN+ S VA SK YGFV Y D SA AI +N +++ K
Sbjct: 385 WNDQDLFDKFKIFGNLESATVAKKNDKTSKGYGFVVYTDPHSATMAISNMNKVEVHAGKR 564
Query: 166 VYVGHFIKRSERATNDTKFT---NLYVKNFPDSVTEAHLKQLFSPYGEITSMIVK--TDN 220
+ V +K S N K ++V P+ ++ LK+ FS YG I +K T+
Sbjct: 565 LKV--LLKSSSNENNKKKIKPGCTIFVFYLPNDWSDKDLKRHFSHYGNILGATIKRETNG 738
Query: 221 KNRKFCFINYADSESAKNAMENLNG 245
K+R + FIN+ + +SA NA+ +NG
Sbjct: 739 KSRGYGFINFENQQSAINAVAGMNG 813
Score = 56.2 bits (134), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Frame = +1
Query: 9 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 68
+L+V L + L++ F G++ S V + + + S GY +V Y + A A+
Sbjct: 355 TLFVFYLPPHWNDQDLFDKFKIFGNLESATVAKKN-DKTSKGYGFVVYTDPHSATMAISN 531
Query: 69 LNYTNI---KGQPARLMWSHRDPSLRKSGAG-NIFVKNLDKSIDNKALFDTFSMFGNILS 124
+N + K L S + + +K G IFV L +K L FS +GNIL
Sbjct: 532 MNKVEVHAGKRLKVLLKSSSNENNKKKIKPGCTIFVFYLPNDWSDKDLKRHFSHYGNILG 711
Query: 125 CKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERATNDTKF 184
+ + GKS+ YGF+++E+++SA A+ +NG G+K Y+ IK+ E ++
Sbjct: 712 ATIKRETNGKSRGYGFINFENQQSAINAVAGMNGFNAGNK--YLKVSIKKGEEQYLAPQY 885
Query: 185 TNL 187
N+
Sbjct: 886 LNI 894
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 52/108 (48%)
Frame = +1
Query: 408 ARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDD 467
+R +L N N + K K G +++ L + D+ LK F YG I A + R+
Sbjct: 556 GKRLKVLLKSSSNENNKKKIK-PGCTIFVFYLPNDWSDKDLKRHFSHYGNILGATIKRET 732
Query: 468 KEQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLS 515
+S+G+GF+ F Q+ A AV M+ K L V + + EQ L+
Sbjct: 733 NGKSRGYGFINFENQQSAINAVAGMNGFNAGNKYLKVSIKKGEEQYLA 876
Score = 37.0 bits (84), Expect = 0.021, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 424 ESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQE 483
+ ++++ L++ L +DQ L + F+ +G + SA V + + + SKG+GFV +
Sbjct: 328 QPNSENKKTTLFVFYLPPHWNDQDLFDKFKIFGNLESATVAKKNDKTSKGYGFVVYTDPH 507
Query: 484 EANKAVTEMH-LKIINGKPLYVGL 506
A A++ M+ +++ GK L V L
Sbjct: 508 SATMAISNMNKVEVHAGKRLKVLL 579
>Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_132900|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding)
spliceosome-associated protein, putative
Length = 1545
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 72/129 (55%)
Frame = +1
Query: 50 GYAYVNYHNLADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDN 109
GY +V Y + E A LN T + G+P R + +D GA N+F+ NLD +D
Sbjct: 349 GYGFVEYEYEYECEYAGKVLNMTKLFGKPLRCNKASQDKKSFDVGA-NLFIGNLDAEVDE 525
Query: 110 KALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVG 169
K LFD FS FG +++ ++ +E S+ +GF+ Y++ ES+ AIE +N + +K V++
Sbjct: 526 KMLFDIFSSFGQVVTVRIIRNEDDTSRGHGFISYDNFESSDMAIENMNNQFICNKKVHIS 705
Query: 170 HFIKRSERA 178
+ K+ +
Sbjct: 706 YAFKKDSKG 732
Score = 55.5 bits (132), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 57/95 (60%)
Frame = +1
Query: 422 NMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQ 481
+ + K+ G NL+I NLD +D++ L ++F +G + + +++R++ + S+G GF+ +
Sbjct: 454 SQDKKSFDVGANLFIGNLDAEVDEKMLFDIFSSFGQVVTVRIIRNEDDTSRGHGFISYDN 633
Query: 482 QEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSR 516
E ++ A+ M+ + I K +++ A K++ + R
Sbjct: 634 FESSDMAIENMNNQFICNKKVHISYAFKKDSKGER 738
>Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_050780|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) rna-binding
protein, putative
Length = 879
Score = 51.6 bits (122), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 59/117 (50%)
Frame = +1
Query: 431 GVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVT 490
G N+++ ++ D L + F+ +G + SA++ RD ++KG+GFV F E A A+
Sbjct: 460 GANVFVFHVPSHWTDMELYQHFQHFGYVLSARIQRDSSGRNKGYGFVSFNNPESAMNAIK 639
Query: 491 EMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNALNSPMQYPNPQSPQ 547
MH ++GK L V L +K E+ +L P++ M MQ P +PQ
Sbjct: 640 GMHGFYVSGKHLKVQL-KKGEEHYMQLNG-----PVQPQMAPTQPYTMQQPIMGTPQ 792
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +1
Query: 95 AGNIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIE 154
N+FV ++ + L+ F FG +LS ++ D G++K YGFV + + ESA AI+
Sbjct: 460 GANVFVFHVPSHWTDMELYQHFQHFGYVLSARIQRDSSGRNKGYGFVSFNNPESAMNAIK 639
Query: 155 KVNGIQLGSKNVYV 168
++G + K++ V
Sbjct: 640 GMHGFYVSGKHLKV 681
Score = 32.3 bits (72), Expect = 0.55, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +1
Query: 8 ASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 67
A+++V + T+ LY+ F G+V S R+ RDS R GY +V+++N A A+
Sbjct: 463 ANVFVFHVPSHWTDMELYQHFQHFGYVLSARIQRDSSGRNK-GYGFVSFNNPESAMNAIK 639
Query: 68 TLNYTNIKGQ 77
++ + G+
Sbjct: 640 GMHGFYVSGK 669
>Plasmodium_knowlesi_strain_H|chr14|PKH_141990|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) cyclophilin,
putative
Length = 384
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Frame = +1
Query: 6 STASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERA 65
+T LYVG ++E + E LY+IF++ G V +I V + VT+K+ G+A+V Y DA+ A
Sbjct: 16 ATEVLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINFVTKKNRGFAFVEYVEKDDAKHA 195
Query: 66 LDTLNYTNIKGQ 77
L +N + G+
Sbjct: 196LYNMNNFELNGK 231
Score = 48.1 bits (113), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEF-GKSKSYGFVHYEDEESAKEAIEKV 156
++V +D++ID K+L+D FS FG++ + +V + K++ + FV Y +++ AK A+ +
Sbjct: 28 LYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINFVTKKNRGFAFVEYVEKDDAKHALYNM 207
Query: 157 NGIQLGSKNVYVGH 170
N +L K +YV +
Sbjct: 208 NNFELNGKRIYVNY 249
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKV-MRDDKEQSKGFGFVCFAQQEEANKAVTEM 492
LY+ +D+ ID+++L ++F +G + + +V + ++++GF FV + ++++A A+ M
Sbjct: 28 LYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINFVTKKNRGFAFVEYVEKDDAKHALYNM 207
Query: 493 HLKIINGKPLYVGLAEKRE 511
+ +NGK +YV + ++
Sbjct: 208 NNFELNGKRIYVNYSRNKK 264
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +1
Query: 179 TNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTD---NKNRKFCFINYADSES 235
++D LYV +++ E L +FS +G++ ++ V + KNR F F+ Y + +
Sbjct: 4 SDDNATEVLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINFVTKKNRGFAFVEYVEKDD 183
Query: 236 AKNAMEN-----LNGKKI 248
AK+A+ N LNGK+I
Sbjct: 184 AKHALYNMNNFELNGKRI 237
>Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_073120|Annotation|Plas
modium_knowlesi_Sanger|(protein coding) mrna processing
protein, putative
Length = 2463
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 47/84 (55%)
Frame = +1
Query: 4 SFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAE 63
S S SL++G++ DVTE L ++ + VG V S+R+ D S G+A+ Y +L
Sbjct: 7 SKSNYSLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLETCM 186
Query: 64 RALDTLNYTNIKGQPARLMWSHRD 87
AL +N +KG+ RL W++ +
Sbjct: 187LALKYINGYELKGRKLRLYWANEE 258
Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +1
Query: 186 NLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTD---NKNRKFCFINYADSESAKNAMEN 242
+L++ N P VTE L + S GE+ S+ +K D N ++ F F Y D E+ A++
Sbjct: 22 SLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLETCMLALKY 201
Query: 243 LNGKKI 248
+NG ++
Sbjct: 202 INGYEL 219
Score = 32.3 bits (72), Expect = 0.50, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 97 NIFVKNLDKSIDNKALFDTFSMFGNILSCKVATD-EFGKSKSYGFVHYEDEESAKEAIEK 155
++++ N+ + + L D S G ++S ++ D E SK + F Y+D E+ A++
Sbjct: 22 SLWIGNIPFDVTERELDDVLSRVGEVVSVRIKYDIEKNISKGFAFCEYKDLETCMLALKY 201
Query: 156 VNGIQLGSKNV 166
+NG +L + +
Sbjct: 202 INGYELKGRKL 234
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding) RNA
binding protein, putative
Length = 1539
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGK-SKSYGFVHYEDEESAKEAIEKV 156
+F+ + K+++ + + F FG + + D+ KS FV A AI +
Sbjct: 265 LFIGRVPKNMEEEQVRPIFEEFGIVKEVVIIRDKITNIHKSSAFVKMASISEADNAIRSL 444
Query: 157 NGI-----QLGSKNVYVGH-------FIKRSERATNDTKFTNLYVKNFPDSVTEAHLKQL 204
N QLGS V F + E + K L++ + P S++E +K++
Sbjct: 445 NNQRTLDPQLGSLQVKYASGEIMKLGFPQNIESGVDQAK---LFIGSLPKSISEESVKEM 615
Query: 205 FSPYGEITSMIVKTDNKN---RKFCFINYADSESAKNAMENLNGKK 247
FSPYG + + + DN + F+ +A E A A+ +LNGKK
Sbjct: 616 FSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSLNGKK 753
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +1
Query: 186 NLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDN---KNRKFCFINYADSESAKNAMEN 242
NL++ + P+ + L Q FSP+GE+ S + T+ +NR F F++Y + ESA A+
Sbjct: 1114 NLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAAAAISQ 1293
Query: 243 LNG 245
+NG
Sbjct: 1294 MNG 1302
Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQ-SKGFGFVCFAQQEEANKAVTEM 492
L+I +L +I ++++KE+F PYG++ +M+D+ KG FV FA +E+A A+ +
Sbjct: 562 LFIGSLPKSISEESVKEMFSPYGSVEEVFIMKDNSTGLGKGCSFVKFAYKEQALYAINSL 741
Query: 493 HLKIINGKPLYVGLAEKREQRLS 515
NGK G A E R +
Sbjct: 742 -----NGKKTLEGCARPVEVRFA 795
Score = 42.0 bits (97), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 95 AGNIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDE-FGKSKSYGFVHYEDEESAKEAI 153
N+F+ ++ L FS FG +LS ++AT++ G+++ + FV YE+ ESA AI
Sbjct: 1108 GANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAAAAI 1287
Query: 154 EKVNGIQLGSKNVYV 168
++NG +K + V
Sbjct: 1288 SQMNGFMALNKKLKV 1332
Score = 34.3 bits (77), Expect = 0.13, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 422 NMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKE-QSKGFGFVCFA 480
N+ + G NL+I ++ + L + F P+G + SA++ + +++GF FV +
Sbjct: 1081 NLSDSSGPPGANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYE 1260
Query: 481 QQEEANKAVTEMH 493
E A A+++M+
Sbjct: 1261 NIESAAAAISQMN 1299
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +1
Query: 8 ASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALD 67
A+L++ + + + L + F+ G + S R+ + T ++ G+A+V+Y N+ A A+
Sbjct: 1111 ANLFIFHVPNEWHQTDLIQAFSPFGELLSARIATEKSTGRNRGFAFVSYENIESAAAAIS 1290
Query: 68 TLN 70
+N
Sbjct: 1291 QMN 1299
>Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071400|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) rna-binding
protein, putative
Length = 1023
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 52/93 (55%)
Frame = +1
Query: 429 HQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKA 488
H L+++NL + TL+ +FE YG + ++ D++ +SKG+GF+ F+ +EA K
Sbjct: 499 HYQNKLFVRNLSQKTNVATLRGIFEKYGKLEECVIIHDNEGKSKGYGFLTFSSPKEAFK- 675
Query: 489 VTEMHLKIINGKPLYVGLAEKREQRLSRLQQRF 521
V + +II+ + +++ A + + + Q F
Sbjct: 676 VMQQPERIIDNRVVFLHFAVSQNYKKFQNNQTF 774
Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
Frame = +1
Query: 88 PSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEE 147
PS R+ + V+N+ S ++ F FG I + ++ G+SK YGFV ++ E
Sbjct: 250 PSTRR-----LMVRNIPFSTRDEQFLKYFETFGEIEDGIIVREKEGRSKGYGFVTFKFVE 414
Query: 148 SAKEAIEKVNGIQLGSKNVYVGHFIKRSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSP 207
S ++ ++ + L +K + V + D L+V+N A L+ +F
Sbjct: 415 SVQKCLKSSH--TLDNKELQV----RLVADPFTDHYQNKLFVRNLSQKTNVATLRGIFEK 576
Query: 208 YGEITSMIVKTDN--KNRKFCFINYADSESAKNAME 241
YG++ ++ DN K++ + F+ ++ + A M+
Sbjct: 577 YGKLEECVIIHDNEGKSKGYGFLTFSSPKEAFKVMQ 684
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 67/152 (44%)
Frame = +1
Query: 4 SFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAE 63
S ST L V ++ + + F T G + + R+ R S GY +V + + +
Sbjct: 247 SPSTRRLMVRNIPFSTRDEQFLKYFETFGEIEDGIIVREKEGR-SKGYGFVTFKFVESVQ 423
Query: 64 RALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNIL 123
+ L + + + K RL+ DP +FV+NL + + L F +G +
Sbjct: 424 KCLKSSHTLDNKELQVRLV---ADP-FTDHYQNKLFVRNLSQKTNVATLRGIFEKYGKLE 591
Query: 124 SCKVATDEFGKSKSYGFVHYEDEESAKEAIEK 155
C + D GKSK YGF+ + + A + +++
Sbjct: 592 ECVIIHDNEGKSKGYGFLTFSSPKEAFKVMQQ 687
Score = 37.4 bits (85), Expect = 0.018, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEMH 493
L ++N+ + D+ + FE +G I ++R+ + +SKG+GFV F E K + H
Sbjct: 265 LMVRNIPFSTRDEQFLKYFETFGEIEDGIIVREKEGRSKGYGFVTFKFVESVQKCLKSSH 444
>Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_093670|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) RNA binding protein,
putative
Length = 4908
Score = 45.4 bits (106), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Frame = +1
Query: 423 MESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQ 482
+E++N+ + L+ NL ++ + LF +G S +++D + +S+G GFV F
Sbjct: 2662 VENENEEPVIKLFFGNLAPITTEKDMHNLFSNFGKCDSLIILKDRRSKSRGSGFVTFYNM 2841
Query: 483 EEANKAVTEMHLKII---NGKPLYVGLAEKREQRLSRLQ 518
+EA A+ ++ KII KPL V E +E++ R +
Sbjct: 2842 QEAVNAIKSLNNKIILSGAHKPLEVRFPENKEEKKLRTK 2958
>Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123140|Annotation|P
lasmodium_knowlesi_Sanger|(protein coding) splicing
factor, putative
Length = 2913
Score = 45.4 bits (106), Expect = 5e-05, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFS-MFGNILSCKVATDE-FGKSKSYGFVHYEDEESAKEAIEK 155
+ V NLD D + +++ FS + G + + D+ GKSK +V + +E+ +A+
Sbjct: 1783 VLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVVKALS- 1959
Query: 156 VNGIQLGSKNVYVGHFIKRSERATNDTKFTNLYVKNFP------------DSVTEAHLKQ 203
NG L ++ + + RA K + + P +++E LKQ
Sbjct: 1960 ANGYMLKNRPIKIQSSQAEKNRAAKAAKHQPIDPNDIPIKLYIGGLVGPLGNISEQELKQ 2139
Query: 204 LFSPYGEITSMIVKTD---NKNRKFCFINYADSESAKNAMENLNGKKI 248
LF+P+GEI + + D K + F FI + + A AM LNG +I
Sbjct: 2140 LFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEI 2283
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 443 IDDQTLKELFEPYGTITSAKVMRDDKE-QSKGFGFVCFAQQEEANKAVTEMHLKIINGKP 501
I +Q LK+LF P+G I ++ RD + KGFGF+ F + EA +A+ ++ I G+
Sbjct: 2116 ISEQELKQLFNPFGEILEVEIHRDPYTGKCKGFGFIQFFRASEAIEAMGVLNGMEIAGRE 2295
Query: 502 LYVGLAE 508
L V A+
Sbjct: 2296 LKVSFAQ 2316
>Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080100|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 456
Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 428 KHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDD-KEQSKGFGFVCFAQQEEAN 486
K+ G LY+ N+ I L+++FE YGTI V+ + +S+ FGFV F+ ++AN
Sbjct: 232 KNDGTTLYVSNISSKITTSKLQDIFEEYGTIEKCYVISNPITRESRNFGFVTFSNPDDAN 411
Query: 487 KAVTEMHLKIING 499
A+ + + I G
Sbjct: 412 NAMIKANKMDIEG 450
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +1
Query: 9 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDT 68
+LYV +++ +T + L +IF G + V + +TR+S + +V + N DA A+
Sbjct: 247 TLYVSNISSKITTSKLQDIFEEYGTIEKCYVISNPITRESRNFGFVTFSNPDDANNAMIK 426
Query: 69 LNYTNIKG 76
N +I+G
Sbjct: 427 ANKMDIEG 450
>Plasmodium_knowlesi_strain_H|chr14|PKH_143430|Annotation|Plasmodium_k
nowlesi_Sanger|(protein coding) RNA binding protein,
putative
Length = 3150
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/224 (28%), Positives = 94/224 (41%), Gaps = 46/224 (20%)
Frame = +1
Query: 96 GNIFVKNLD---KSIDNKALFDTFSMF--GNILSCKVA----TDEFGK-------SKSYG 139
+I+VKNL+ K D K LF+ F NI+ K A DE GK S+ YG
Sbjct: 2371 ASIYVKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISKKNDEKGKEPEQKLLSQGYG 2550
Query: 140 FVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRS------------------ERATND 181
FV ++ +E A EAI+K+ L GH ++ S
Sbjct: 2551 FVEFKSKELALEAIKKLTATTLD------GHVLELSLSRNRVKKKKNKNNEEKEVVKEKK 2712
Query: 182 TKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTD--NKNRKFCFINYADSESAKNA 239
L VKN VT+ L++LFS +G I S+ + + N++R + F+ + A
Sbjct: 2713 KITKKLLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRSRGYAFVEFMSKNECLTA 2892
Query: 240 MENLN-----GKKITDDGQIDHTYDAK-----KEEAENANANNG 273
+E+L G+ + D D +D K + E N NNG
Sbjct: 2893 IESLQHTHLYGRHLIIDFADDFIFDKNVNEFDKMKEEGVNNNNG 3024
Score = 35.4 bits (80), Expect = 0.057, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Frame = +1
Query: 8 ASLYVGDLNEDVTEAVLYEIFNTV-GHVS-SIRVCRDSVTRK-------------SLGYA 52
AS+YV +LN + E L ++F + G ++ +I + ++++K S GY
Sbjct: 2371 ASIYVKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISKKNDEKGKEPEQKLLSQGYG 2550
Query: 53 YVNYHNLADAERALDTLNYTNIKGQPARLMWSHR--------------DPSLRKSGAGNI 98
+V + + A A+ L T + G L S +K +
Sbjct: 2551 FVEFKSKELALEAIKKLTATTLDGHVLELSLSRNRVKKKKNKNNEEKEVVKEKKKITKKL 2730
Query: 99 FVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNG 158
VKNL + + L FS FGNI S ++ + + +S+ Y FV + + AIE +
Sbjct: 2731 LVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNRSRGYAFVEFMSKNECLTAIESLQH 2910
Query: 159 IQLGSKNVYV 168
L +++ +
Sbjct: 2911 THLYGRHLII 2940
Score = 33.9 bits (76), Expect = 0.18, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 16/94 (17%)
Frame = +1
Query: 433 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSK----------------GFGF 476
++Y+KNL+ ++ LK+LFE + +++ K SK G+GF
Sbjct: 2374 SIYVKNLNFNTKEEDLKKLFEKLEGFITCNIVKSKKAISKKNDEKGKEPEQKLLSQGYGF 2553
Query: 477 VCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKR 510
V F +E A +A+ ++ ++G L + L+ R
Sbjct: 2554 VEFKSKELALEAIKKLTATTLDGHVLELSLSRNR 2655
>Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_082150|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) rna-binding
protein, putative
Length = 864
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATD-EFGKSKSYGFVHYEDEESAKEAIEKV 156
I++ NLD + + FS FG + + D E GKSK Y F+ YED+ S A++
Sbjct: 112 IYIGNLDSRLTEGDIVIVFSQFGEPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNF 291
Query: 157 NGIQLGSKNVYVGHFI 172
NG +L + + V H +
Sbjct: 292 NGYKLLDRPLVVDHIL 339
Score = 37.0 bits (84), Expect = 0.020, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +1
Query: 7 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 66
++ +Y+G+L+ +TE + +F+ G + + RD T KS GY +++Y + A+
Sbjct: 103 SSYIYIGNLDSRLTEGDIVIVFSQFGEPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAV 282
Query: 67 DTLNYTNIKGQP 78
D N + +P
Sbjct: 283 DNFNGYKLLDRP 318
Score = 28.1 bits (61), Expect = 9.8, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKE-QSKGFGFVCFAQQEEANKAVTEM 492
+YI NLD + + + +F +G ++RD + +SKG+ F+ + Q AV
Sbjct: 112 IYIGNLDSRLTEGDIVIVFSQFGEPIDVNLVRDKETGKSKGYCFLSYEDQRSTVLAVDNF 291
Query: 493 HLKIINGKPLYV 504
+ + +PL V
Sbjct: 292 NGYKLLDRPLVV 327
>Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_090430|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) nucleic acid binding
factor, putative
Length = 2283
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 74/332 (22%), Positives = 125/332 (37%), Gaps = 3/332 (0%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCFAQQEEANKAVTEM 492
+++ L + L++ F YG I V ++ ++KGFGFV F +Q +K + +
Sbjct: 1117 IFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMDKVLKD- 1293
Query: 493 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIRHHMNNALNSPMQYPNPQSPQLQFNQ 552
L II GK + V +A R+ + L H + + N SP +
Sbjct: 1294 KLHIICGKEIVVDVASMRDSKTKHLFHLPSDHYLAKYPKNDRKSPSR------------- 1434
Query: 553 NTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLNFNANLRGQMNQMRFYTQG 612
NNLI++ + + + + ++ N ++ N Y
Sbjct: 1435 -------------THNNLINFNKYHNVYNKTNNIRDMSKNIDNNLVMQNFYNLCPTY--- 1566
Query: 613 GANMMNNSMNQNKVNAQLHPGHQYPNALGQGNPQQPNLSAPGQHNNNQAMQQQPANNQML 672
N++ N MN ++ P +P A +P + NNQ M Q + M
Sbjct: 1567 --NILGNRMNNKQIYKNNMPMPIFPPAGYNMDP---------AYFNNQQMPYQNCLDYMG 1713
Query: 673 NNNMRNMNNRASRNMGAGNIANIPNQKQLPINMVGKQNTSQGSQMNHQGPPP--PQQQQG 730
N+ NM N + N + N+ N K+ M G MN Q PPP + Q
Sbjct: 1714 NDYYWNMANYYNWNNMMFHNENLYNAKK----MEYPYYVCNGQYMN-QSPPPIVKNKMQR 1878
Query: 731 QGSPQQQQTQQKSPQQMQQQVPPNGNFKFTSQ 762
+ SP ++ + P V P G ++ Q
Sbjct: 1879 KNSPMEESMMKYPP-----NVLPGGGYRSPGQ 1959
>Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 1494
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGK-SKSYGFVHYEDEESAKEAIEKV 156
+FV ++ K++ + F +G+I D+ +++ FV E A++AI+ +
Sbjct: 226 LFVSSVPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQDL 405
Query: 157 NGIQLGSKNV-------YVGHFIKRSERATN-DTKFTNLYVKNFPDSVTEAHLKQLFSPY 208
+G ++ + + +G K N + L+V + P + E ++ LF+ Y
Sbjct: 406 HGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFNRY 585
Query: 209 GEITSM-IVKTDNKNRKFC-FINYADSESAKNAMENLNGKKITDDGQ 253
G +T + I+K N K C F+NYA E A++NLNGK ++ +
Sbjct: 586 GNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNGKIAIENAE 726
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 95 AGNIFVKNLDKSIDNKALFDTFSMFGNILSCKVATD-EFGKSKSYGFVHYEDEESAKEAI 153
NIF+ ++ L FS FGNI+S +AT+ + G+++ + FV Y++ +SA A+
Sbjct: 1159 GANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSAINAV 1338
Query: 154 EKVNG 158
+ +NG
Sbjct: 1339 KYMNG 1353
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +1
Query: 186 NLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDN---KNRKFCFINYADSESAKNAMEN 242
N+++ + P+ + L FSP+G I S + T+ +NR F F++Y + +SA NA++
Sbjct: 1165 NIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSYDNVDSAINAVKY 1344
Query: 243 LNG 245
+NG
Sbjct: 1345 MNG 1353
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Frame = +1
Query: 10 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 69
L+V + +++TE + IF G + + +D + +V ++ A++A+ L
Sbjct: 226 LFVSSVPKNLTENDIKSIFEEYGSIKDVVFIKDKKPNVNRANVFVRMESIYYAQKAIQDL 405
Query: 70 NYTNIKGQP-ARLMWSHRDPSLRKSGA---------GNIFVKNLDKSIDNKALFDTFSMF 119
+ + + L+ L K G +FV +L K I + + + F+ +
Sbjct: 406 HGKKVLCETLGPLIVKFAIGELEKYGVNMHNANENEAKLFVGSLPKEIAEEQIRNLFNRY 585
Query: 120 GNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNG 158
GN+ + + G SK FV+Y +E AI+ +NG
Sbjct: 586 GNVTEVYIMKNSNGVSKRCAFVNYAYKEQGIFAIQNLNG 702
Score = 32.7 bits (73), Expect = 0.40, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 421 LNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRD-DKEQSKGFGFVCF 479
LNM + G N++I ++ + L F P+G I SA + + D +++GF FV +
Sbjct: 1129 LNMNEVSGPVGANIFIFHIPNEWIQNDLLAAFSPFGNIISAHIATEKDTGRNRGFAFVSY 1308
Query: 480 AQQEEANKAVTEMH 493
+ A AV M+
Sbjct: 1309 DNVDSAINAVKYMN 1350
>Plasmodium_knowlesi_strain_H|chr14|PKH_145470|Annotation|Plasmodium_k
nowlesi_Sanger|(protein coding) Clustered-asparagine-rich
protein, putative
Length = 1425
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = +1
Query: 90 LRKSGAGNIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESA 149
L N+F+ ++ + LF F FGNI+S K+ D G++ +GFV Y++ SA
Sbjct: 1153 LNGPNGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRDNTGRNSGFGFVSYDNILSA 1332
Query: 150 KEAIEKVNGIQLGSKNVYV 168
+ AI+ +NG + +K + V
Sbjct: 1333 QHAIQFMNGYFVNNKYLKV 1389
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 46/91 (50%)
Frame = +1
Query: 418 FDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFV 477
F+N + N G NL+I ++ D L + F +G I S+K+ RD+ ++ GFGFV
Sbjct: 1129 FNNNDKTKLNGPNGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRDNTGRNSGFGFV 1308
Query: 478 CFAQQEEANKAVTEMHLKIINGKPLYVGLAE 508
+ A A+ M+ +N K L V L +
Sbjct: 1309 SYDNILSAQHAIQFMNGYFVNNKYLKVQLKK 1401
>Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134440|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 1947
Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 8 ASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVC---RDSVTRKSLGYAYVNYHNLADAER 64
A+LY+G+L+ +VTE L + F G V+S+++ D +K+ +V + N DAE
Sbjct: 457 ANLYLGNLSPEVTEEYLCQRFGKFGKVNSVKIMYPRTDEDKKKARISGFVCFENRDDAEN 636
Query: 65 ALDTLNYTNIKGQPARLMWSHRDP 88
A D L+ + G ++ WS P
Sbjct: 637 ARDALDGVEMFGNIVKVGWSKAIP 708
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +1
Query: 407 RARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVM-- 464
+ +R I K + L + K + NLY+ NL + ++ L + F +G + S K+M
Sbjct: 382 KIKRKLIEIEKNETLFSYAPRKDRVANLYLGNLSPEVTEEYLCQRFGKFGKVNSVKIMYP 561
Query: 465 --RDDKEQSKGFGFVCFAQQEEANKA 488
+DK++++ GFVCF +++A A
Sbjct: 562 RTDEDKKKARISGFVCFENRDDAENA 639
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Frame = +1
Query: 178 ATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITS---MIVKTDNKNRK------FCFI 228
A + NLY+ N VTE +L Q F +G++ S M +TD +K CF
Sbjct: 436 APRKDRVANLYLGNLSPEVTEEYLCQRFGKFGKVNSVKIMYPRTDEDKKKARISGFVCFE 615
Query: 229 NYADSESAKNAMENL 243
N D+E+A++A++ +
Sbjct: 616 NRDDAENARDALDGV 660
>Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060400|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 1200
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 420 NLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQ-SKGFGFVC 478
N+ E N ++ ++ IKNLD I++ L L + I +++RD++ S G FV
Sbjct: 721 NMFGEKPNFNRKKSVCIKNLDRKINESDLYNLLKDVDQIKGIRILRDERTSVSTGVSFVL 900
Query: 479 FAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQR 513
F + KA+ H +NG+ + V ++ E R
Sbjct: 901 FENRSSVKKAIEMFHGHSVNGREIIVEKIQRAEDR 1005
>Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_091720|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 621
Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 187 LYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTD-NKN-RKFCFINYADSESAKNAMENLN 244
+YV N P S T+ + + F +G+IT + +K + N N + FI Y + ESAK ++ N
Sbjct: 28 VYVGNIPGSTTKEEIIKAFQEFGKITGIDIKYNRNANGTNYAFIEYENYESAKKTVQKKN 207
Query: 245 GKKITDDG-QIDHTYDAKKEEA 265
G+ + ++++T D K +E
Sbjct: 208 GQNFMGNMLKVEYTNDKKNKEG 273
Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVN 157
++V N+ S + + F FG I + + +Y F+ YE+ ESAK+ ++K N
Sbjct: 28 VYVGNIPGSTTKEEIIKAFQEFGKITGIDIKYNRNANGTNYAFIEYENYESAKKTVQKKN 207
Query: 158 G 158
G
Sbjct: 208 G 210
>Plasmodium_knowlesi_strain_H|chr14|PKH_144160|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 333
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 3 PSFSTASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADA 62
P+ + LYV +L ++ LY+IF G V IR T+ G ++V Y ++ DA
Sbjct: 25 PAEVSRILYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTK---GTSFVVYDDIYDA 195
Query: 63 ERALDTLNYTNIKGQ 77
+ ALD L+ N+ G+
Sbjct: 196KNALDHLSGFNVAGR 240
Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Frame = +1
Query: 187 LYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYADSESAKNAMENLNGK 246
LYV+N P ++ L +F YG + + + F+ Y D AKNA+++L+G
Sbjct: 46 LYVRNLPYKISADELYDIFGKYGTVRQIRKGNAEGTKGTSFVVYDDIYDAKNALDHLSGF 225
Query: 247 KITDDGQIDHTYDA-----KKEEAEN-ANANNGTN 275
+ + YD KKE E N G N
Sbjct: 226 NVAGRYLVVLYYDPVKAQRKKELQEKLKNEQEGKN 330
Score = 35.4 bits (80), Expect = 0.065, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEMH 493
LY++NL I L ++F YGT+ ++ + + E +KG FV + +A A+ +
Sbjct: 46 LYVRNLPYKISADELYDIFGKYGTVR--QIRKGNAEGTKGTSFVVYDDIYDAKNALDHLS 219
Query: 494 LKIINGKPLYVGLAEK-REQRLSRLQQRFR 522
+ G+ L V + + QR LQ++ +
Sbjct: 220 GFNVAGRYLVVLYYDPVKAQRKKELQEKLK 309
>Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060610|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) hypothetical protein,
conserved in Plasmodium species
Length = 4347
Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Frame = +1
Query: 97 NIFVKNLDKSIDNKALFDTFSMFGNILSC--KVATDEFGKSKSYGFVHYEDEESAKEAIE 154
N+F+ N+ SI + + + +FG I+ K + D++ SY FV++ DE+ A A+
Sbjct: 832 NVFLGNIPPSITEERIKNVLEVFGYIIHIEYKWSIDKW----SYAFVYFVDEKCAINAVN 999
Query: 155 KVNGIQL--GSKNVYVGHFIKRSERATNDTKF---------------TNLYVKNFPDSVT 197
+N + S N + FI + +T NL++ P T
Sbjct: 1000 ILNQKRFFDNSPNHKLICFIVSKQIPNQNTLHYSKANFSLLKDGPPGANLFLYGIPLKWT 1179
Query: 198 EAHLKQLFSPYGEITSMIVKTDNK-------NRKFCFINYADSESAKNAMENLN 244
E +L QL + YG + + + N NR F F++Y + +SA A E+L+
Sbjct: 1180 ELNLIQLVNKYGHVVGLRIPYINNEHDKKQGNRGFGFVSYDNKKSAIEAFEDLS 1341
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +1
Query: 174 RSERATNDTK---FTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINY 230
R+ ++ N+ + TN+++ N P S+TE +K + +G I + K + F+ +
Sbjct: 787 RTSKSNNNFRNIVITNVFLGNIPPSITEERIKNVLEVFGYIIHIEYKWSIDKWSYAFVYF 966
Query: 231 ADSESAKNAMENLNGKKITDD 251
D + A NA+ LN K+ D+
Sbjct: 967 VDEKCAINAVNILNQKRFFDN 1029
Score = 32.7 bits (73), Expect = 0.38, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 426 KNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKV-----MRDDKEQSKGFGFVCFA 480
K+ G NL++ + + L +L YG + ++ D K+ ++GFGFV +
Sbjct: 1123 KDGPPGANLFLYGIPLKWTELNLIQLVNKYGHVVGLRIPYINNEHDKKQGNRGFGFVSYD 1302
Query: 481 QQEEANKAVTEMHLKIINGKPLYVGLAEKREQRL 514
++ A +A ++ I+GK L V L E L
Sbjct: 1303 NKKSAIEAFEDLSKMYIHGKLLKVQLKNGEEHLL 1404
>Plasmodium_knowlesi_strain_H|chr10|PKH_101550|Annotation|Plasmodium
_knowlesi_Sanger|(protein coding) Splicing factor,
putative
Length = 939
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVN 157
I+V NL + + + + F +GNIL C V G ++ F+ +ED A +AI++ +
Sbjct: 28 IYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSG--AAFAFIEFEDARDAADAIKEKD 201
Query: 158 GIQLGSKNVYV 168
G G + V
Sbjct: 202 GSDYGGNKLRV 234
Score = 35.4 bits (80), Expect = 0.061, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 185 TNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFINYADSESAKNAMENLN 244
+ +YV N P V+ ++ F YG I VK F FI + D+ A +A++ +
Sbjct: 22 SRIYVGNLPSHVSPRDVENEFRKYGNILKCDVKKTVSGAAFAFIEFEDARDAADAIKEKD 201
Query: 245 G 245
G
Sbjct: 202 G 204
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110340|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding) U1
small nuclear ribonucleoprotein, putative
Length = 1239
Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Frame = +1
Query: 418 FDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFV 477
F N+++ K ++I L ++++ LK+ FE YG I K++ D + KG+GF+
Sbjct: 259 FKNVDLTEDPKK---TIFIGRLSYDVNEKKLKKEFEVYGKIKKVKIIYDKNFKPKGYGFI 429
Query: 478 CFAQQEEANKAVTEMHLKIINGKPLYVGLAEKR 510
F + N A K I+ + + V + R
Sbjct: 430 EFEHTKSFNDAYNLADGKKIDNRRILVDVERAR 528
Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVN 157
IF+ L ++ K L F ++G I K+ D+ K K YGF+ +E +S +A +
Sbjct: 298 IFIGRLSYDVNEKKLKKEFEVYGKIKKVKIIYDKNFKPKGYGFIEFEHTKSFNDAYNLAD 477
Query: 158 GIQLGSKNVYV 168
G ++ ++ + V
Sbjct: 478 GKKIDNRRILV 510
>Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060680|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) hypothetical
protein, conserved in Plasmodium species
Length = 1101
Score = 37.7 bits (86), Expect = 0.012, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Frame = +1
Query: 641 GQGNPQQPNLSAPGQHNNNQAMQQQPANNQMLNNNMRN---MNNRASRNMGAGN-IANIP 696
G+ NP A Q NNQ Q ANNQ NN N NN+ + N A N AN
Sbjct: 67 GENNPHSGGQGANSQCTNNQYANNQYANNQYANNQYANNQYANNQCTNNQCANNQYANSQ 246
Query: 697 N-QKQLPINMVGKQNTSQGSQMNHQGPPPP----QQQQGQGSPQQQ 737
+ Q N +N+ P P Q Q G PQQQ
Sbjct: 247 HGNNQFSHNHCNNAPHPNAPNINYNCPYPNMHNYQHQYPMGPPQQQ 384
>Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092450|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 2841
Score = 35.4 bits (80), Expect = 0.067, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +1
Query: 431 GVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDD-KEQSKGFGFVCFAQQEEANKAV 489
G +L IKNL ++++F+ +G + + D + +GFGFV + + + A +A+
Sbjct: 13 GCSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEAL 192
Query: 490 TEMHLKIINGKPLYVGLAEKREQRLSRLQQ--------RFRMHPIR 527
++ I+G + + +A+ R + ++ R+R HP R
Sbjct: 193 ITLNHTKIDGNEVKIIIAQNRRKSPETMKMYQRSVHKGRYRGHPYR 330
Score = 28.1 bits (61), Expect = 9.0, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 97 NIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKS-KSYGFVHYEDEESAKEAIEK 155
++ +KNL + F FG + + D + + + +GFV Y + + AKEA+
Sbjct: 19 SLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAKEALIT 198
Query: 156 VNGIQLGSKNVYVGHFIKRSERATNDT 182
+N ++ V + I ++ R + +T
Sbjct: 199 LNHTKIDGNEVKI--IIAQNRRKSPET 273
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111070|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding) RNA
binding protein, putative
Length = 546
Score = 35.0 bits (79), Expect = 0.073, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKE-QSKGFGFVCFAQQEEANKAVTEM 492
++ NL + + L F Y + AKV+R+ + ++KG+GFV + ++ A+ M
Sbjct: 154 IFCGNLGNEVTTDILANAFRKYKSFNMAKVIREKRNNKTKGYGFVSLSNPQDMLDALKNM 333
Query: 493 HLKIINGKPLYVGLAEKREQRL 514
+ K I +P+ V ++ +++ +
Sbjct: 334 NNKFIGNRPIIVKRSKWKDREV 399
>Plasmodium_knowlesi_strain_H|PK4.chr03|PKH_031250|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) SICAvar antigen
(fragment)
Length = 2630
Score = 35.0 bits (79), Expect = 0.085, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 10/172 (5%)
Frame = +1
Query: 195 SVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFI-NYADSESAKNAMENLNGKKITDDGQ 253
+VT+ H K + +T +K DNKNR+ CF+ KN N + K+
Sbjct: 523 TVTDMHNKSTPCEHDSLTKHCIKLDNKNREICFLFTRGLDHMYKNVTGNDDAMKLFKRTM 702
Query: 254 IDHTYDAKKEEAENANANNGTNNGIATGADANGVEGEVGKGTTV---------DGKGDNK 304
+ +A ++ + A+A NNG + NG+E + T+ D KG +
Sbjct: 703 MCAALNAYAKKIK-ADATAKKNNGTGSCDIDNGIEQAFKQIKTIMSGESSQCKDPKGADC 879
Query: 305 VSTAGDTGKSGEETEGGANTTGATSESVKGNEGNKVESDDKANETSGVTSTD 356
D + ++ E N G T E+V N K +DK ++T S D
Sbjct: 880 FECTQD--QDFDKCEINTNGQGTTGENV--NSRLKTMFEDKEDKTGLKESLD 1023
>Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071810|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) rna-binding
protein, putative
Length = 1410
Score = 35.0 bits (79), Expect = 0.087, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESA 149
++VKN+ ++ K L + F + +V D GKSKS+ +V ++ +E+A
Sbjct: 292 LYVKNITDEVNKKDLINFFCKATGFVDTRVVRDSSGKSKSFAYVEFDTKENA 447
Score = 34.7 bits (78), Expect = 0.10, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Frame = +1
Query: 341 ESDDKANETSGV-TSTDGASNVKEDGASSIAANAAAQGESTNGINKKDSGSESADSPNIL 399
+ D K+N+ GV TS D + + + S +G+ +D +E +
Sbjct: 43 KEDGKSNDEPGVATSLDISEGEYLVSGDEGEESNISIAHSDDGVTHRDDSAEKGEGHVKH 222
Query: 400 YVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTIT 459
Y+ H + +LK L +NK LY+KN+ D ++ + L F
Sbjct: 223 YLIEHMQDKSK--LLK----ELGTLEENK-----LYVKNITDEVNKKDLINFFCKATGFV 369
Query: 460 SAKVMRDDKEQSKGFGFVCFAQQEEA 485
+V+RD +SK F +V F +E A
Sbjct: 370 DTRVVRDSSGKSKSFAYVEFDTKENA 447
Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Frame = +1
Query: 434 LYIKNLDDAIDDQTLKELFEPYGTIT----SAKVMRDDKEQSKGFGFVCFAQQEEANKAV 489
+ +KNL L +LFE G I S KV ++ ++++G+ F+ F +A A+
Sbjct: 916 IVVKNLHFNTRKNKLIKLFEQIGEIDKINLSKKVSENNIKRNRGYAFITFKNSNDATSAL 1095
Query: 490 TEMHLKIINGKPLYV 504
++ II+G+ + V
Sbjct: 1096I-LNDSIIDGRSILV 1137
>Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123660|Annotation|P
lasmodium_knowlesi_Sanger|(protein coding) U2 snRNP
auxiliary factor, putative
Length = 2598
Score = 34.7 bits (78), Expect = 0.090, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Frame = +1
Query: 68 TLNYTNIKGQPARLMWSHRDPSLRKSGAGN--IFVKNLDKSIDNKALFDTFSMFGNILSC 125
T+ +T+I+ + ++ + +R +G + ++++NL + + + D FG +
Sbjct: 1792 TVVFTDIQHEVFEMVKPIKIAPVRSTGDDDNKLYIQNLPHDLGDVQIRDLLQQFGKLKGF 1971
Query: 126 KVATDE-FGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSK--NVYVGHFIKRSERATNDT 182
V D+ G +K YGF YED A+ +NG G +V F K N
Sbjct: 1972 NVIKDQSTGLNKGYGFFEYEDSNCTPIAMHALNGFVCGQNILSVKKATFGKSQNSTQNAN 2151
Query: 183 KFT------NLYVKNFPDSVTEAHLK--------QLFSPYGEITSMIVKTDN 220
+ +L V P+S+++ L Q GE +S +V+ N
Sbjct: 2152 TISLGSGSVDLPVSLLPNSISQKILSNSIIGLQIQASRKIGEKSSRVVQLTN 2307
>Plasmodium_knowlesi_strain_H|chr10|PKH_102530|Annotation|Plasmodium
_knowlesi_Sanger|(protein coding) cell differentiation
protein rcd1, putative
Length = 2424
Score = 34.7 bits (78), Expect = 0.090, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 50/138 (36%)
Frame = +1
Query: 638 NALGQGNPQQPNLSAPGQHNNNQAMQQQPANNQMLNNNMRNMNNRASRNMGAGNIANIPN 697
N +GNP Q N S N + N N+ + N+ NMG N++ P+
Sbjct: 205 NNAARGNPSQGNSSQSNPSQGNSSQSNSNQGNSSQGNSNQGSPNQGGPNMGISNLST-PS 381
Query: 698 QKQLPINMVGKQNTSQGSQMNHQGPPPPQQQQGQGSPQQQQTQQKSPQQMQQQVPPNGNF 757
Q P+N V + G+Q QG G SPQ Q + +PP N
Sbjct: 382 QGGPPMNGVVAAPPNNGAQEIAQGSTSAAGAGGHSSPQHQGS-----SSTHGAIPPTSNT 546
Query: 758 KFTSQARNRMEMPNKNAN 775
+ + + N N
Sbjct: 547 RNVKNSNTSTAISNPTGN 600
>Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_051690|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding)
eukaryotictranslation initiation factor, putative
Length = 810
Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 424 ESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQ-SKGFGFVCFAQQ 482
E++NK V + NL + +++ L LF G I+ + + + Q SKGF F+ ++ +
Sbjct: 544 ETQNKECTVR--VTNLSEEVNESELSNLFGRVGQISRMFLAKHKETQNSKGFAFITYSNR 717
Query: 483 EEANKAVTEMH 493
EEA +A+ +++
Sbjct: 718 EEAKRAIEKLN 750
>Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092860|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 471
Score = 34.3 bits (77), Expect = 0.13, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Frame = +1
Query: 187 LYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKN-------RKF--CFINYADSESAK 237
LYV N +V+E HLK++F +G + + + D +N KF I + + + AK
Sbjct: 16 LYVHNLTKNVSEDHLKEIFMNFGNLKDIHISVDEENVSGTNGEEKFICAKIKFENEKDAK 195
Query: 238 NAMENLNGKKITDDGQIDHTYDAKKEEAE 266
A E++NG GQID + K E E
Sbjct: 196 AAKEHMNG------GQIDGKTVSIKYEHE 264
Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 10 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVT------RKSLGYAYVNYHNLADAE 63
LYV +L ++V+E L EIF G++ I + D + A + + N DA+
Sbjct: 16 LYVHNLTKNVSEDHLKEIFMNFGNLKDIHISVDEENVSGTNGEEKFICAKIKFENEKDAK 195
Query: 64 RALDTLNYTNIKGQPARLMWSHRDPS 89
A + +N I G+ + + H S
Sbjct: 196 AAKEHMNGGQIDGKTVSIKYEHEGKS 273
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_114310|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding) RNA
binding protein, putative
Length = 1755
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 LYVKNFPDSVTEAHLKQLFSPYGEITSMIVKT-DNKNRKFCFINYADSESAKNAMENLNG 245
+YVKN VTE +K+ F EI ++ K KN+K+C I + SE A LNG
Sbjct: 31 VYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKA-SRLNG 207
Query: 246 K 246
+
Sbjct: 208 E 210
>Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060650|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) pre-mRNA splicing
factor, putative
Length = 1488
Score = 33.9 bits (76), Expect = 0.17, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Frame = +1
Query: 98 IFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEF-GKSKSYGFVHYEDEESAKEAIEKV 156
I+V NL ++ ++D FS +G I V G S+ FVHY D A+ AI++
Sbjct: 43 IYVGNLPGNVVEDEVYDLFSKYGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEYAIDRR 222
Query: 157 NG---------IQLGSKNVYVGHFIKRSERATNDTKFTN-LYVKNFPDSVTEAHLKQLFS 206
+G ++ +N G + + E + + + + N P+S HLK +
Sbjct: 223 DGYKYDGVRLRVEYSGENRSYGKYRNKEEGTGPPVRTEHRIIISNLPESCKWQHLKDVMR 402
Query: 207 PYGEI 211
G++
Sbjct: 403 QCGDV 417
Score = 33.5 bits (75), Expect = 0.21, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 187 LYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNK---NRKFCFINYADSESAKNAMENL 243
+YV N P +V E + LFS YG I + VK F F++Y DS A+ A++
Sbjct: 43 IYVGNLPGNVVEDEVYDLFSKYGRIKYIDVKKPRAPGVPYSFAFVHYFDSRDAEYAIDRR 222
Query: 244 NGKK 247
+G K
Sbjct: 223 DGYK 234
>Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080550|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) RNA binding
protein, putative
Length = 738
Score = 33.9 bits (76), Expect = 0.19, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 48/98 (48%)
Frame = +1
Query: 430 QGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAV 489
+G +Y+ NL + LK + G + + D + +SKG G V +A EEA +A+
Sbjct: 55 KGCRVYVGNLPWKVTWPILKAHMKKAGEVVRVDIFEDMQGRSKGCGIVEYATFEEAQEAI 234
Query: 490 TEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRMHPIR 527
++ + + ++V E RE+ S Q+ R + +R
Sbjct: 235 NTLNDSKLEDRLIFV--REDREEN-SGNYQKGRFNSVR 339
Score = 32.0 bits (71), Expect = 0.72, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 183 KFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNR-KFC-FINYADSESAKNAM 240
K +YV N P VT LK GE+ + + D + R K C + YA E A+ A+
Sbjct: 55 KGCRVYVGNLPWKVTWPILKAHMKKAGEVVRVDIFEDMQGRSKGCGIVEYATFEEAQEAI 234
Query: 241 ENLNGKKITD 250
LN K+ D
Sbjct: 235 NTLNDSKLED 264
>Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_051920|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) nuclear
cap-binding protein, putative
Length = 711
Score = 33.5 bits (75), Expect = 0.24, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 48/101 (47%)
Frame = +1
Query: 7 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 66
+ ++Y+G+L+ TE +YE G+V +I + + G+ +V Y + +A+
Sbjct: 97 SKTVYIGNLSIYTTEQQIYEHMRQAGNVENIIMGLHRTEKSPCGFCFVVYRSKEGYTQAV 276
Query: 67 DTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSI 107
+ LN + + G+ R+ RK G G V+ D+ I
Sbjct: 277 NFLNNSILDGRIIRVDEDLGIIGRRKYGRGKSGVQKRDERI 399
>Plasmodium_knowlesi_strain_H|chr10|PKH_102990|Annotation|Plasmodium
_knowlesi_Sanger|(protein coding) Arg-rich splicing
factor, putative
Length = 984
Score = 32.3 bits (72), Expect = 0.50, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +1
Query: 428 KHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDD-KEQSKGFGFVCFAQQEEAN 486
++Q ++L I+ L ++E F+ +G I + D ++ +GFGFV F ++A
Sbjct: 22 RNQPMSLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAE 201
Query: 487 KAVTEMHLKIINGKPLYVGLAEK--REQRLSRLQQR 520
A+ EM+ I+G + V +A+K + R+ R +++
Sbjct: 202 VALKEMNGAEIDGNRVEVFVAQKGRSDPRVMRYKEK 309
Score = 28.5 bits (62), Expect = 8.0, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +1
Query: 97 NIFVKNLDKSIDNKALFDTFSMFGNILSCKVATDEFGKS-KSYGFVHYEDEESAKEAIEK 155
++ ++ L + + F FG I + D + K + +GFV + D + A+ A+++
Sbjct: 37 SLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEVALKE 216
Query: 156 VNGIQLGSKNVYV 168
+NG ++ V V
Sbjct: 217 MNGAEIDGNRVEV 255
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_113330|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding) RNA
binding protein, putative
Length = 462
Score = 32.3 bits (72), Expect = 0.51, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%)
Frame = +1
Query: 404 HQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGTITSAKV 463
+++ R + I K N + V + I NLD I L ELF + +A +
Sbjct: 97 YKTNTRHNRINKYNNRNSYQYHDERDSQVRVKISNLDYTISKNDLVELFSNVCKVVNAWI 276
Query: 464 MRDDKEQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKR 510
D ++S G G F +A KA+ + I G + + + ++R
Sbjct: 277 NYDHTDRSDGTGVCVFENINDAQKAIDKYDGSEIEGMAIKMEIVQRR 417
>Plasmodium_knowlesi_strain_H|chr14|PKH_142270|Annotation|Plasmodium
_knowlesi_Sanger|(protein coding) gtp-binding
translation elongation factor tu family protein,
putative
Length = 2319
Score = 32.0 bits (71), Expect = 0.74, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +1
Query: 225 FCFINYADSESAKNAMENLNG--KKITDDGQIDHTYDAKKEEAENANANNGTNNGIATGA 282
+C N+ D++ K N+ KKI + + E+ + ++ G+ N TG
Sbjct: 811 WCTDNFEDAKQNKCEHNNVLAIFKKIIEYFDSPMMLPSGSEDVSSVDSKMGSQNSFITGD 990
Query: 283 DANGVEGEVGKGTTVDGKGDNKVSTAGD 310
DANG+ VG+ + K D+ + D
Sbjct: 991 DANGITTAVGESVGKNNKKDDAMVEGKD 1074
>Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134100|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) hypothetical protein,
conserved in Plasmodium species
Length = 2997
Score = 31.6 bits (70), Expect = 0.93, Method: Composition-based stats.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 4/211 (1%)
Frame = +1
Query: 162 GSKNVYVGH---FIKRSERATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSMIV-K 217
G KNV+ H ++ ++ R + VKN + +L++LF + S+ K
Sbjct: 877 GEKNVFFFHDLCYLNKNNR--------RVIVKNIKRTCHVENLQKLFKHIEKDPSIYFPK 1032
Query: 218 TDNKNRKFCFINYADSESAKNAMENLNGKKITDDGQIDHTYDAKKEEAENANANNGTNNG 277
DNK + + + +++ ++ K A+ LN K+ + E+ N G
Sbjct: 1033 KDNKKQGYAVVTFSNYQNVKKALL-LNKSKVCG---------STITVEEDRNPRFLKLLG 1182
Query: 278 IATGADANGVEGEVGKGTTVDGKGDNKVSTAGDTGKSGEETEGGANTTGATSESVKGNEG 337
+ GAD +GE T DG+ N GD+ S +ET+GG ++ T G E
Sbjct: 1183 V-QGAD----DGESTNNRTHDGENSNDEKDDGDS--SNDETDGGESSNDETD----GGES 1329
Query: 338 NKVESDDKANETSGVTSTDGASNVKEDGASS 368
+ E DD + + +++ K+DG SS
Sbjct: 1330 SNDEKDDGDSSNDETDDGENSNDEKDDGDSS 1422
>Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126070|Annotation
|Plasmodium_knowlesi_Sanger|(protein coding) RNA-binding
protein, putative
Length = 2565
Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 100 VKNLDKSIDNKALFDTFSMFGNI--LSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVN 157
VKN+ K L D F FG+I +S KV T G Y V + E AK ++++N
Sbjct: 97 VKNISKETKESELLDLFKKFGSIESISLKVNT-SIGPYAIYAHVLFSAPEEAKRCLKQMN 273
Query: 158 G 158
G
Sbjct: 274 G 276
>Plasmodium_knowlesi_strain_H|chr14|PKH_140580|Annotation|Plasmodium
_knowlesi_Sanger|(protein coding) U1 small nuclear
ribonucleoprotein a, putative
Length = 1500
Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +1
Query: 434 LYIKNLDDAID----DQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAV 489
LY+KNL+D I ++LK+LF+ YG I VM+ KG +V + E + KA+
Sbjct: 664 LYVKNLNDRIKIDEMKKSLKDLFKQYGVIEDLVVMK--SFWRKGQAWVVYDTVESSTKAL 837
Query: 490 TEMHLKIINGKPLYVGLAEKREQRLSRLQQRF 521
+ ++ GK + + + + S+ F
Sbjct: 838 NALQGFVLFGKIMQINYSHNKSDVHSKRDGTF 933
>Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134520|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) choline kinase,
putative
Length = 1326
Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 694 NIPNQKQLPINMVG--KQNTSQGSQMNHQGPPPP 725
N+PN +PINMVG K + +GS +H PP
Sbjct: 641 NLPNTFAIPINMVGFFKSSIRRGSP*SHSSIRPP 540
>Plasmodium_knowlesi_strain_H|chr14|PKH_146750|Annotation|Plasmodium_k
nowlesi_Sanger|(protein coding) Kir
Length = 1944
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 320 GGANTTGATSESVKGNEGNKVESDDKANETSGVTSTDGASNVKEDGASSIAA---NAAAQ 376
GG+N TG S + G + DD + + T DG+S + +DG++++ ++
Sbjct: 1642 GGSNNTGGRSRGRRSTIGRQ-HFDDTSTDNDSSTMGDGSSTLGDDGSTTLGGGGESSTLS 1818
Query: 377 GESTN 381
G ST+
Sbjct: 1819 GSSTD 1833
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111950|Annot
ation|Plasmodium_knowlesi_Sanger|(protein coding) RNA
binding protein, putative
Length = 1935
Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Frame = +1
Query: 98 IFVKNLDKSID-----NKALFDTFSMFG-NILSCKVATDEFGKSKSYGFVHYEDEESAKE 151
++V +LDK D N L F F +I+ K+ ++ + SY F+ + + + AK
Sbjct: 73 LWVGDLDKIKDEVVDENYILHRMFYEFAEDIIKVKLCKEKNSQRHSYAFIEFTNYDMAKY 252
Query: 152 AIEKVNG---------IQLGSKNVYVGHFIKRSER----ATNDTKFTNLYVKNFPDSVTE 198
+ +NG +L + + E+ +D ++YV P T+
Sbjct: 253 CFDNLNGKWIPGRIHRFKLNWAKYNITENVNTHEKNLDVELDDKGTYSIYVGGLPKGTTK 432
Query: 199 AHLKQLFSPYGE---ITSMIVKTD-NKNRKFCFINYADSESAKNAMENLNG 245
++ LFS + MI N+N +CFI++ + + A++ ++G
Sbjct: 433 EEIETLFSQFYSSICFVKMIKNVQKNQNTIYCFIHFFNYDECIKALKEMDG 585
>Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_094440|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) hypothetical
protein, conserved in Plasmodium species
Length = 9624
Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats.
Identities = 44/215 (20%), Positives = 80/215 (37%), Gaps = 13/215 (6%)
Frame = +1
Query: 550 FNQNTLNYGRPVLTPFNQNNLISWRHQQAAQQQVVHQQAAQQQLNFNANLRGQMNQMRFY 609
F+ NT G N+ + ++ R Q Q+ H LN + NL Q N
Sbjct: 547 FSSNTGTEGTKREGDENKLHSVAERVTQEVHQRDDHSVVQNITLNADINLTTQTNPQEIT 726
Query: 610 TQGGAN---------MMNNSMNQNKVNAQLHPGHQYPNALGQGNPQQPNLSAPGQHNNNQ 660
+ N+ M + + ++ H+ +P+ N ++ HN
Sbjct: 727 CNEVTKKSTLKLEERVDNHEMCRKNIKLKVEECHRENEFEVTEHPEDTNNTSTSCHNTLS 906
Query: 661 AMQQQPANNQMLNNNMRNMNNRASRNMGA-GNIANIP---NQKQLPINMVGKQNTSQGSQ 716
+ + PAN + N+ N+ RN G + I +K G+ + + Q
Sbjct: 907 SKENTPANMKNFNHEGHNLRETKKRNAHEIGKLIKIEASGKEKDEGQKRTGQMDQNIRVQ 1086
Query: 717 MNHQGPPPPQQQQGQGSPQQQQTQQKSPQQMQQQV 751
N Q +Q QG + +++Q ++K Q M +V
Sbjct: 1087KNLQ---KEKQTQGSKNGERRQDKKKGKQHMSVEV 1182
>Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126190|Annotation
|Plasmodium_knowlesi_Sanger|(protein coding)
hypothetical protein, conserved in Plasmodium species
Length = 1497
Score = 29.6 bits (65), Expect = 3.1, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 398 ILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPY 455
I Y+ PH +R + + NL + +N N IKN + ++ + E F PY
Sbjct: 211 IFYI-PHNDSIKRKITERKTYQNLFLGRQNNADHANSLIKNGNSDMEKERTSENFSPY 381
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110700|Annotat
ion|Plasmodium_knowlesi_Sanger|(protein coding)
hypothetical protein, conserved in Plasmodium species
Length = 2043
Score = 29.6 bits (65), Expect = 3.4, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 414 LKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 457
LK +D+ N+ ++N H+ + Y ++ DA+++ L + +P GT
Sbjct: 1306 LKKMYDDKNLTNRNSHELLKNYERDFIDAVEEGALAQSADPQGT 1437
>Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_114270|Annotat
ion|Plasmodium_knowlesi_Sanger|(protein coding)
polypyrimidine tract binding protein, putative
Length = 1992
Score = 28.9 bits (63), Expect = 5.2, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 187 LYVKNFPDSVTEAHLKQLFSPYGEITSMIVKTDNKNRKFCFIN--YADSESAKNAMENLN 244
L++ N + VTE + LF+ YGEI + ++ + +K I + ++A A+ +L+
Sbjct: 1756 LFISNVSEEVTEECMMNLFTKYGEIKKIKIQPAREGKKHMTITVELSSEDAATMALMDLH 1935
Query: 245 GKKITD 250
+ D
Sbjct: 1936 NFYLKD 1953
>Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126370|Annotation|P
lasmodium_knowlesi_Sanger|(protein coding) hypothetical
protein, conserved in Plasmodium species
Length = 5907
Score = 28.9 bits (63), Expect = 5.6, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Frame = +1
Query: 288 EGEVGKGTTVDGKGD-NKVSTAGDTGKSGEETEGG-----ANTTGATSESVKGN----EG 337
+GE+G+ T VD D + + G+ K GE+ E G A G SE +KG+ E
Sbjct: 4453 KGEIGERTDVDEHIDIGEHTEMGEHKKEGEQDEVGNYDEVAEVEGVKSEHIKGSTEEGET 4632
Query: 338 NKVESDDKANETSGVTSTDG---ASNVKEDGASSIAANAAAQGESTNGINKKDSGSESAD 394
K D + E+ G ++G N+ ED + I +GI +++ E +
Sbjct: 4633 MKDTPIDSSRESKGTEKSEGFDINQNLHEDIVNPI-----------DGIVGEEAKKEELE 4779
Query: 395 SPNILYVGPHQSRARRHAILKAK---FDNLNMESKNKHQGVNLYIKNLDDAIDDQ 446
N H + ++ I + DNL+ +N+ + + +NLD IDD+
Sbjct: 4780 GANT-----HSAHNKKGEITPKEHEVVDNLDRNGENQEKVEDKNEQNLDYRIDDE 4929
>Plasmodium_knowlesi_strain_H|PK4.chr01|PKH_011400|Annotation|Plasmo
dium_knowlesi_Sanger|(protein coding) pseudouridylate
synthase 1, putative
Length = 1575
Score = 28.5 bits (62), Expect = 6.7, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 263 EEAENANANNGTNNGIATGADANGVEGEVGKGTTVDGKGDNKVSTAGDTGKSGEETEGGA 322
++ EN A+ N +A N V + G+ D KG+NKV+ + GE+ G
Sbjct: 859 QKGENEVADQKGENEVADQKGENEVADQKGENEVADQKGENKVAD-----QKGEDESAGK 1023
Query: 323 N 323
N
Sbjct: 1024N 1026
>Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_124190|Annotation
|Plasmodium_knowlesi_Sanger|(protein coding) cyclin,
putative
Length = 981
Score = 28.5 bits (62), Expect = 7.5, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 756 NFKFTSQARNRMEMPNKNANKVNAINNMNVNF 787
NF F +N + + NK NK+ +INN+ +NF
Sbjct: 765 NFVFQFLKKNLIIVGNKFQNKLISINNVEINF 670
>Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_052710|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) hypothetical protein,
conserved in Plasmodium species
Length = 4413
Score = 28.1 bits (61), Expect = 8.8, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +1
Query: 288 EGEVGKGTTVDGKGDNKVSTAGDTGKSGEETEGGANTTG--ATSESVKGNEGNKVESDDK 345
EG+VG+ DG+G + + E+T G T G T+ K N K D+K
Sbjct: 4093 EGDVGEDVKTDGEGATEPDKGEEKTNGDEKTNGDEKTNGDEKTNGDEKTNGDEKTNGDEK 4272
Query: 346 AN---ETSGVTSTDG 357
N +T+G T+G
Sbjct: 4273 NNGEEKTNGEEKTNG 4317
>Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_070240|Annotation|Plasmodi
um_knowlesi_Sanger|(protein coding) mitochondrial carrier
protein, putative
Length = 3348
Score = 28.1 bits (61), Expect = 9.7, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 78 PARLMWSHRDPSLRKSGAGNIFVKNLD--KSIDNKALFDTFSMFGNILSCKVATDEFGKS 135
PA+ + +P LRK GA ++ KNL + I+N L D F + +I S K + +
Sbjct: 1129 PAKRDYIEMEPLLRKVGANHVIKKNLGGMERINNVLLNDLFGKYTHITSNKSSNTHLMRV 1308
Query: 136 KSYGFVHYEDEESAK 150
K + + E +
Sbjct: 1309 KRNNRLSFRSLEDGR 1353
Database: cds.fa
Posted date: Mar 10, 2008 12:43 PM
Number of letters in database: 11,140,562
Number of sequences in database: 5106
Lambda K H
0.310 0.126 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5106
Number of Hits to DB: 9,176,690
Number of extensions: 129419
Number of successful extensions: 1762
Number of sequences better than 10.0: 268
Number of HSP's gapped: 1527
Number of HSP's successfully gapped: 422
Length of query: 866
Length of database: 3,713,520
Length adjustment: 101
Effective length of query: 765
Effective length of database: 3,197,814
Effective search space: 2446327710
Effective search space used: 2446327710
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 43 (21.2 bits)
# TBLASTN 2.2.17 [Aug-26-2007]
# Query: sep43_pknowlesi_cds_1
# Database: cds.fa
# Fields: Query id, Subject id, % identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit score
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_144100|Annotation|Plasmodium_knowlesi_Sanger|(protein 100.00 866 0 0 1 866 25 2622 0.0 1281
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110990|Annotation|Plasmodium_knowlesi_Sanger|(protein 27.17 265 170 7 4 245 40 813 2e-14 76.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110990|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.42 183 127 4 9 187 355 894 4e-08 56.2
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110990|Annotation|Plasmodium_knowlesi_Sanger|(protein 30.56 108 75 1 408 515 556 876 3e-04 43.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110990|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.57 84 59 1 424 506 328 579 0.021 37.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_132900|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.33 129 86 1 50 178 349 732 1e-12 70.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_132900|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.32 95 70 0 422 516 454 738 6e-08 55.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_050780|Annotation|Plasmodium_knowlesi_Sanger|(protein 30.77 117 81 2 431 547 460 792 8e-07 51.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_050780|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.43 74 50 0 95 168 460 681 2e-05 47.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_050780|Annotation|Plasmodium_knowlesi_Sanger|(protein 30.00 70 49 1 8 77 463 669 0.55 32.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_141990|Annotation|Plasmodium_knowlesi_Sanger|(protein 38.89 72 44 0 6 77 16 231 1e-06 51.2
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_141990|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.43 74 49 1 98 170 28 249 8e-06 48.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_141990|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.58 79 57 1 434 511 28 264 3e-04 43.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_141990|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.05 78 45 2 179 248 4 237 0.003 39.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_073120|Annotation|Plasmodium_knowlesi_Sanger|(protein 34.52 84 55 0 4 87 7 258 1e-05 47.8
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_073120|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.33 66 41 1 186 248 22 219 0.023 36.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_073120|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.35 71 52 1 97 166 22 234 0.50 32.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.51 166 106 5 98 247 265 753 1e-05 47.8
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annotation|Plasmodium_knowlesi_Sanger|(protein 36.51 63 37 1 186 245 1114 1302 4e-04 42.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.73 83 54 2 434 515 562 795 4e-04 42.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.33 75 49 1 95 168 1108 1332 6e-04 42.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.03 73 53 1 422 493 1081 1299 0.13 34.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111140|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.40 63 47 0 8 70 1111 1299 1.3 30.8
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071400|Annotation|Plasmodium_knowlesi_Sanger|(protein 27.96 93 67 1 429 521 499 774 5e-05 45.8
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071400|Annotation|Plasmodium_knowlesi_Sanger|(protein 23.72 156 117 4 88 241 250 684 8e-05 45.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071400|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.34 152 115 3 4 155 247 687 2e-04 43.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071400|Annotation|Plasmodium_knowlesi_Sanger|(protein 30.00 60 42 0 434 493 265 444 0.018 37.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_093670|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.29 99 67 1 423 518 2662 2958 5e-05 45.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123140|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.79 168 106 5 98 248 1783 2283 5e-05 45.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123140|Annotation|Plasmodium_knowlesi_Sanger|(protein 37.31 67 41 1 443 508 2116 2316 0.005 38.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080100|Annotation|Plasmodium_knowlesi_Sanger|(protein 34.25 73 47 1 428 499 232 450 8e-05 45.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080100|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.41 68 48 0 9 76 247 450 0.007 38.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_143430|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.12 224 115 9 96 273 2371 3024 1e-04 44.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_143430|Annotation|Plasmodium_knowlesi_Sanger|(protein 23.16 190 117 4 8 168 2371 2940 0.057 35.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_143430|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.53 94 54 1 433 510 2374 2655 0.18 33.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_082150|Annotation|Plasmodium_knowlesi_Sanger|(protein 34.21 76 49 1 98 172 112 339 1e-04 44.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_082150|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.39 72 53 0 7 78 103 318 0.020 37.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_082150|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.39 72 52 1 434 504 112 327 9.8 28.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_090430|Annotation|Plasmodium_knowlesi_Sanger|(protein 22.29 332 255 9 434 762 1117 1959 1e-04 44.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.15 167 114 5 98 253 226 726 2e-04 43.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.85 65 42 1 95 158 1159 1353 0.003 39.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.33 63 39 1 186 245 1165 1353 0.004 39.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Plasmodium_knowlesi_Sanger|(protein 22.01 159 114 2 10 158 226 702 0.022 37.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_133790|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.73 74 51 1 421 493 1129 1350 0.40 32.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_145470|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.91 79 53 0 90 168 1153 1389 3e-04 43.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_145470|Annotation|Plasmodium_knowlesi_Sanger|(protein 31.87 91 62 0 418 508 1129 1401 0.002 40.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134440|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.14 84 54 1 8 88 457 708 4e-04 42.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134440|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.07 86 57 1 407 488 382 639 8e-04 41.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134440|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.00 75 42 2 178 243 436 660 0.007 38.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060400|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.42 95 67 1 420 513 721 1005 0.001 41.2
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_091720|Annotation|Plasmodium_knowlesi_Sanger|(protein 31.71 82 53 3 187 265 28 273 0.002 40.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_091720|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.51 61 43 0 98 158 28 210 0.009 38.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_144160|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.33 75 50 1 3 77 25 240 0.004 39.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_144160|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.42 95 62 2 187 275 46 330 0.006 38.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_144160|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.67 90 65 2 434 522 46 309 0.065 35.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060610|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.86 174 103 5 97 244 832 1341 0.004 39.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060610|Annotation|Plasmodium_knowlesi_Sanger|(protein 27.16 81 56 1 174 251 787 1029 0.013 37.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060610|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.60 94 64 1 426 514 1123 1404 0.38 32.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr10|PKH_101550|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.58 71 50 1 98 168 28 234 0.007 38.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr10|PKH_101550|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.51 61 43 0 185 245 22 204 0.061 35.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110340|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.88 93 68 1 418 510 259 528 0.008 38.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110340|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.17 71 51 0 98 168 298 510 0.009 38.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060680|Annotation|Plasmodium_knowlesi_Sanger|(protein 33.02 106 62 4 641 737 67 384 0.012 37.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092450|Annotation|Plasmodium_knowlesi_Sanger|(protein 23.58 106 72 2 431 527 13 330 0.067 35.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092450|Annotation|Plasmodium_knowlesi_Sanger|(protein 22.99 87 66 2 97 182 19 273 9.0 28.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111070|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.39 82 61 1 434 514 154 399 0.073 35.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr03|PKH_031250|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.58 172 118 5 195 356 523 1023 0.085 35.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071810|Annotation|Plasmodium_knowlesi_Sanger|(protein 30.77 52 36 0 98 149 292 447 0.087 35.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071810|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.66 146 109 4 341 485 43 447 0.10 34.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_071810|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.00 75 50 2 434 504 916 1137 4.1 29.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_123660|Annotation|Plasmodium_knowlesi_Sanger|(protein 22.67 172 114 5 68 220 1792 2307 0.090 34.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr10|PKH_102530|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.64 138 104 2 638 775 205 600 0.090 34.7
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_051690|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.58 71 49 2 424 493 544 750 0.12 34.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092860|Annotation|Plasmodium_knowlesi_Sanger|(protein 32.58 89 51 3 187 266 16 264 0.13 34.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_092860|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.74 86 57 1 10 89 16 273 3.6 29.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_114310|Annotation|Plasmodium_knowlesi_Sanger|(protein 37.70 61 37 2 187 246 31 210 0.15 34.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060650|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.80 125 83 3 98 211 43 417 0.17 33.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr06|PKH_060650|Annotation|Plasmodium_knowlesi_Sanger|(protein 35.94 64 38 1 187 247 43 234 0.21 33.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080550|Annotation|Plasmodium_knowlesi_Sanger|(protein 26.53 98 72 2 430 527 55 339 0.19 33.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr08|PKH_080550|Annotation|Plasmodium_knowlesi_Sanger|(protein 34.29 70 44 2 183 250 55 264 0.72 32.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_051920|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.75 101 76 0 7 107 97 399 0.24 33.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr10|PKH_102990|Annotation|Plasmodium_knowlesi_Sanger|(protein 27.08 96 67 2 428 520 22 309 0.50 32.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr10|PKH_102990|Annotation|Plasmodium_knowlesi_Sanger|(protein 23.29 73 55 1 97 168 37 255 8.0 28.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_113330|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.30 107 81 0 404 510 97 417 0.51 32.3
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_142270|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.00 88 64 1 225 310 811 1074 0.74 32.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134100|Annotation|Plasmodium_knowlesi_Sanger|(protein 24.64 211 155 9 162 368 877 1422 0.93 31.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126070|Annotation|Plasmodium_knowlesi_Sanger|(protein 36.07 61 37 2 100 158 97 276 1.5 30.8
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_140580|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.26 92 62 2 434 521 664 933 1.7 30.4
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr13|PKH_134520|Annotation|Plasmodium_knowlesi_Sanger|(protein 44.12 34 17 1 694 725 641 540 2.4 30.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|chr14|PKH_146750|Annotation|Plasmodium_knowlesi_Sanger|(protein 27.69 65 44 2 320 381 1642 1833 2.6 30.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_111950|Annotation|Plasmodium_knowlesi_Sanger|(protein 21.64 171 111 6 98 245 73 585 2.8 30.0
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr09|PKH_094440|Annotation|Plasmodium_knowlesi_Sanger|(protein 20.47 215 158 4 550 751 547 1182 3.0 29.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126190|Annotation|Plasmodium_knowlesi_Sanger|(protein 27.59 58 42 1 398 455 211 381 3.1 29.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_110700|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.55 44 31 0 414 457 1306 1437 3.4 29.6
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr11.pseudo.embl|PKH_114270|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.76 66 47 1 187 250 1756 1953 5.2 28.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_126370|Annotation|Plasmodium_knowlesi_Sanger|(protein 25.71 175 114 7 288 446 4453 4929 5.6 28.9
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr01|PKH_011400|Annotation|Plasmodium_knowlesi_Sanger|(protein 29.51 61 43 1 263 323 859 1026 6.7 28.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr12.pseudo|PKH_124190|Annotation|Plasmodium_knowlesi_Sanger|(protein 40.62 32 19 0 756 787 765 670 7.5 28.5
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr05|PKH_052710|Annotation|Plasmodium_knowlesi_Sanger|(protein 30.67 75 47 2 288 357 4093 4317 8.8 28.1
sep43_pknowlesi_cds_1 Plasmodium_knowlesi_strain_H|PK4.chr07|PKH_070240|Annotation|Plasmodium_knowlesi_Sanger|(protein 28.00 75 52 1 78 150 1129 1353 9.7 28.1
