CLUSTAL FORMAT for T-COFFEE Version_5.05 [http://www.tcoffee.org], CPU=1.24 sec, SCORE=34, Nseq=5, Len=564 Hypothetical_protein_Caenorhab ---MALLLVMGIPASGKSTFRRKIQTAHRE------------------------------ Predicted_nucletide_kinase_Met ---MRLLILTGPPGSGKTCFARELARELRQEGWRV------------------------- prot_cds --MKCAFLFYGKPCSGKDTFINLLLTKRRQ--LELFLYLFNNLIHKNESNVRLREKIFFI pstk_Drosophila_melanogaster MRRICLVALIGLPAAGKSSLCSWLLGQQAA--LRV------------------------- Protein_Methanocaldococcus_jan MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNI--------------------------- . . * * ** : : Hypothetical_protein_Caenorhab ------------------------------------------------------------ Predicted_nucletide_kinase_Met ------------------------------------------------------------ prot_cds QLIKYYYRIEKRRRKTSIFCGHGGETDQKVSFRFLVQLTSHLLHIGRSSGWDRGAGSKGV pstk_Drosophila_melanogaster ------------------------------------------------------------ Protein_Methanocaldococcus_jan ------------------------------------------------------------ Hypothetical_protein_Caenorhab -------------------------------------LLESTSFDDFRM----------- Predicted_nucletide_kinase_Met ------------------AHVEADALRGFLWD----------------------EFDPKL prot_cds KNGKTKEQLRRGLPPRGITHQLYPTLRKVVQRKPLRRTTLTNQSDDFHLICYLYRHKDEW pstk_Drosophila_melanogaster ------------------------------------RHIVHLCYDDF------------- Protein_Methanocaldococcus_jan ----------------DVIV---------------------LGSDLIRES------FPVW Hypothetical_protein_Caenorhab ----------------------------------------------------MRTRSSDK Predicted_nucletide_kinase_Met EQVARELFLKSVETC--------------------------------------------- prot_cds MYHYHSYLRRNKIKTFNVSLDFIEKQLYRGHLPEVTSLNPSKIVQRNLHLLLNRTYTVYG pstk_Drosophila_melanogaster ---------------------------------------------------LDATPSADL Protein_Methanocaldococcus_jan KEKYE---------------EFIKKSTYR------------------------------- Hypothetical_protein_Caenorhab NARQTRKSFECHVES--------------------------------------------- Predicted_nucletide_kinase_Met ------------------------------------------------------------ prot_cds REKHYRGVYYPIVKKTTIKGGHVMLIRALNHKKEKGPNMTEAVNIAMKPTSANQVKYWRR pstk_Drosophila_melanogaster AYKEQRGRIFKVIEK---------LISAIQEDTDWPP----------------------- Protein_Methanocaldococcus_jan -----------LIDS------------------------------ALK------------ Hypothetical_protein_Caenorhab ------------------------CISESTSKIYVIEDIFYLKSMRHPFQKIAKRHGLQF Predicted_nucletide_kinase_Met -------------------------L-DAELDLVIADDTNYYSSMRRELALLALERKVPW prot_cds ARRIAYAYCASLMQMQNQRCSSRQCRRKTEHVLILLNDTFHLPSMRKKYYLLCRKYHFNY pstk_Drosophila_melanogaster ---------------QVRRISSSGDYN-SGRHLILCDDNFYYRSMRYKLYQLCRDSGCIF Protein_Methanocaldococcus_jan ------------------------------NYWVIVDDTNYYNSMRRDLINIAKKYNKNY : :* : *** :. : Hypothetical_protein_Caenorhab GIIFLKVGIVEALRRNSHRTGIEKQKNETIRKIFEKMEDPDEILENS-IVLET---DEVE Predicted_nucletide_kinase_Met GIVYLRTGLDTCLRRNRERGEP--IPEEVVRRIYDRFEPPEPDRWWERATLVL---DDSR prot_cds AQIYLKAPLNMCLERNRRRKKFKPIEDKTIVRNHFYQQKYAVQFRRENQTISPNRITVVR pstk_Drosophila_melanogaster GQIYMASSLDSCLQANSLRSDATRVPVDVVRQMNERLEVPDTSEAWERNSLTLNGLDMDT Protein_Methanocaldococcus_jan AIIYLKASLDVLIRRNIERGE--KIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDID . ::: : :. * * ..: : : . : Hypothetical_protein_Caenorhab IDVEVVMNKLKFDF----TAKKPIVPEVSLKKSHIQKPPPPSKLESLDVLTRRLVSELMQ Predicted_nucletide_kinase_Met VSEEV-LEFV---------ESGLRVEKPK----KRRRRTDPSSVNEVDVRTRQVMGELMR prot_cds GGRKW-QKEVFSI--------------------------------QVDSSAQQKVCHLTD pstk_Drosophila_melanogaster TGSAL-LAFIASLLDLPAMETTLDLPPAV----ARGLRQDQSLVHRLDLLLRTRIGALLD Protein_Methanocaldococcus_jan FNE------IAKKLI----EKSKEIPKFYVL--EENKNKNNNISDKIDKETRKIVSEYIK . : :* : : Hypothetical_protein_Caenorhab NDKT------------------------------MNGRKLSDARKKLLIDLSGN---LEI Predicted_nucletide_kinase_Met RLSET------------------------GAATQELGRKLSELRREIVSSVEDPEKAVRE prot_cds ALRLIYSHLDEFRNQAKGKQTHIVQEIKRDNPPNRLDMLNLMINKIIHEKLKSL------ pstk_Drosophila_melanogaster GLRQ-------------------------GEDKRLAGQTLNSRRKDILTKFRTEIGGKQI Protein_Methanocaldococcus_jan SKKLDKDK----------------------------IKEVVELRKEFLKKIKKM---EEV .: : .. Hypothetical_protein_Caenorhab SNENDPKFLYDLKLKLIEFYDK-- Predicted_nucletide_kinase_Met FRRRAEEVI-RECLHGD------G prot_cds PNGIIDLAV-GPPVGAQ----NCK pstk_Drosophila_melanogaster DGDVEGDAL-DYYVNLL----N-- Protein_Methanocaldococcus_jan DAD---RVL-KEFKDLL----NSY :