CLUSTAL FORMAT for T-COFFEE Version_5.05 [http://www.tcoffee.org], CPU=1.24 sec, SCORE=34, Nseq=5, Len=564 

Hypothetical_protein_Caenorhab  ---MALLLVMGIPASGKSTFRRKIQTAHRE------------------------------
Predicted_nucletide_kinase_Met  ---MRLLILTGPPGSGKTCFARELARELRQEGWRV-------------------------
prot_cds                        --MKCAFLFYGKPCSGKDTFINLLLTKRRQ--LELFLYLFNNLIHKNESNVRLREKIFFI
pstk_Drosophila_melanogaster    MRRICLVALIGLPAAGKSSLCSWLLGQQAA--LRV-------------------------
Protein_Methanocaldococcus_jan  MGDIMLIILTGLPGVGKSTFSKNLAKILSKNNI---------------------------
                                      . . * *  **  :   :                                    

Hypothetical_protein_Caenorhab  ------------------------------------------------------------
Predicted_nucletide_kinase_Met  ------------------------------------------------------------
prot_cds                        QLIKYYYRIEKRRRKTSIFCGHGGETDQKVSFRFLVQLTSHLLHIGRSSGWDRGAGSKGV
pstk_Drosophila_melanogaster    ------------------------------------------------------------
Protein_Methanocaldococcus_jan  ------------------------------------------------------------
                                                                                            

Hypothetical_protein_Caenorhab  -------------------------------------LLESTSFDDFRM-----------
Predicted_nucletide_kinase_Met  ------------------AHVEADALRGFLWD----------------------EFDPKL
prot_cds                        KNGKTKEQLRRGLPPRGITHQLYPTLRKVVQRKPLRRTTLTNQSDDFHLICYLYRHKDEW
pstk_Drosophila_melanogaster    ------------------------------------RHIVHLCYDDF-------------
Protein_Methanocaldococcus_jan  ----------------DVIV---------------------LGSDLIRES------FPVW
                                                                                            

Hypothetical_protein_Caenorhab  ----------------------------------------------------MRTRSSDK
Predicted_nucletide_kinase_Met  EQVARELFLKSVETC---------------------------------------------
prot_cds                        MYHYHSYLRRNKIKTFNVSLDFIEKQLYRGHLPEVTSLNPSKIVQRNLHLLLNRTYTVYG
pstk_Drosophila_melanogaster    ---------------------------------------------------LDATPSADL
Protein_Methanocaldococcus_jan  KEKYE---------------EFIKKSTYR-------------------------------
                                                                                            

Hypothetical_protein_Caenorhab  NARQTRKSFECHVES---------------------------------------------
Predicted_nucletide_kinase_Met  ------------------------------------------------------------
prot_cds                        REKHYRGVYYPIVKKTTIKGGHVMLIRALNHKKEKGPNMTEAVNIAMKPTSANQVKYWRR
pstk_Drosophila_melanogaster    AYKEQRGRIFKVIEK---------LISAIQEDTDWPP-----------------------
Protein_Methanocaldococcus_jan  -----------LIDS------------------------------ALK------------
                                                                                            

Hypothetical_protein_Caenorhab  ------------------------CISESTSKIYVIEDIFYLKSMRHPFQKIAKRHGLQF
Predicted_nucletide_kinase_Met  -------------------------L-DAELDLVIADDTNYYSSMRRELALLALERKVPW
prot_cds                        ARRIAYAYCASLMQMQNQRCSSRQCRRKTEHVLILLNDTFHLPSMRKKYYLLCRKYHFNY
pstk_Drosophila_melanogaster    ---------------QVRRISSSGDYN-SGRHLILCDDNFYYRSMRYKLYQLCRDSGCIF
Protein_Methanocaldococcus_jan  ------------------------------NYWVIVDDTNYYNSMRRDLINIAKKYNKNY
                                                                  : :*  :  ***     :.      :

Hypothetical_protein_Caenorhab  GIIFLKVGIVEALRRNSHRTGIEKQKNETIRKIFEKMEDPDEILENS-IVLET---DEVE
Predicted_nucletide_kinase_Met  GIVYLRTGLDTCLRRNRERGEP--IPEEVVRRIYDRFEPPEPDRWWERATLVL---DDSR
prot_cds                        AQIYLKAPLNMCLERNRRRKKFKPIEDKTIVRNHFYQQKYAVQFRRENQTISPNRITVVR
pstk_Drosophila_melanogaster    GQIYMASSLDSCLQANSLRSDATRVPVDVVRQMNERLEVPDTSEAWERNSLTLNGLDMDT
Protein_Methanocaldococcus_jan  AIIYLKASLDVLIRRNIERGE--KIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDID
                                . :::   :   :. *  *        ..: :     :        .   :         

Hypothetical_protein_Caenorhab  IDVEVVMNKLKFDF----TAKKPIVPEVSLKKSHIQKPPPPSKLESLDVLTRRLVSELMQ
Predicted_nucletide_kinase_Met  VSEEV-LEFV---------ESGLRVEKPK----KRRRRTDPSSVNEVDVRTRQVMGELMR
prot_cds                        GGRKW-QKEVFSI--------------------------------QVDSSAQQKVCHLTD
pstk_Drosophila_melanogaster    TGSAL-LAFIASLLDLPAMETTLDLPPAV----ARGLRQDQSLVHRLDLLLRTRIGALLD
Protein_Methanocaldococcus_jan  FNE------IAKKLI----EKSKEIPKFYVL--EENKNKNNNISDKIDKETRKIVSEYIK
                                 .       :                                    :*   :  :     

Hypothetical_protein_Caenorhab  NDKT------------------------------MNGRKLSDARKKLLIDLSGN---LEI
Predicted_nucletide_kinase_Met  RLSET------------------------GAATQELGRKLSELRREIVSSVEDPEKAVRE
prot_cds                        ALRLIYSHLDEFRNQAKGKQTHIVQEIKRDNPPNRLDMLNLMINKIIHEKLKSL------
pstk_Drosophila_melanogaster    GLRQ-------------------------GEDKRLAGQTLNSRRKDILTKFRTEIGGKQI
Protein_Methanocaldococcus_jan  SKKLDKDK----------------------------IKEVVELRKEFLKKIKKM---EEV
                                                                           .: :  ..         

Hypothetical_protein_Caenorhab  SNENDPKFLYDLKLKLIEFYDK--
Predicted_nucletide_kinase_Met  FRRRAEEVI-RECLHGD------G
prot_cds                        PNGIIDLAV-GPPVGAQ----NCK
pstk_Drosophila_melanogaster    DGDVEGDAL-DYYVNLL----N--
Protein_Methanocaldococcus_jan  DAD---RVL-KEFKDLL----NSY
                                        :