genewise output
Score 274.44 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000033_1.0   38 FEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPLG 
                     F+P +LGL   ++LT ++ +KG  CK+PQ  LL LL  L+          
                     FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQELSATP------ 
LmjF36_01_20050-4666 tgcgtcgccggtccagtaccagtataccccaccgcccgctgac       
                     tactctgtccatatcaacgtaggggatcacattcttaatcccc       
                     ccccagccttgcgccccacgggcctagagcgaacgggacgagt       


SPP00000033_1.0   87 RGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHG-----G 
                          GQ++                     +GMD  ++PL H        
                     -----GQKD---------------------VGMDCSIVPLHHTNSKGEA 
LmjF36_01_20050-4537      gcag                     ggagtaagccccaaaaggg 
                          gaaa                     tgtaggttctaacagagac 
                          gggc                     ccgccctgggcccccatgt 


SPP00000033_1.0  131 LSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSV 
                     L LV TTDFF+P V DP+++G+I  ANVLSDLY+MGI +CD MLMLL+  
                     LFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAA 
LmjF36_01_20050-4468 ctcgtaagtttcagtgctccgcagggagttgctaagacgtgaacatcgg 
                     ttttcccatttcgtcacttagatgccattcatagtgtcagactttttcc 
                     gccccggccccctggcgcggtacgtaccgccgtcgccgtttaggggcgc 


SPP00000033_1.0  180 SQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVAT 
                     S  M E ER   T  ++KGF + A    T VTGGQTV+NPW +IGGVA  
                     STEMDEHERLITTREIMKGFAERARLATTTVTGGQTVMNPWPLIGGVAM 
LmjF36_01_20050-4321 aagaggcgccaaacgaaagtggcgctgaaagaggcagaactccagggga 
                     gcataaaagttccgattagtcagcgtcccctcggacttacgcttggtct 
                     ccggcgtacgtggcacgactagggggggaggaagggcgcggggtcggcg 


SPP00000033_1.0  229 VVCQPNEFIMPDSAV-VGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVK 
                      V    E++ P   +  GD+LVLTKPLG QVAVN  QWL  P    +   
                     AVVSEAEMVRPTGLLCAGDILVLTKPLGCQVAVNLKQWLLRPSPLYEEA 
LmjF36_01_20050-4174 gggtgggagccagcttgggatgcaaccgtcgggacactcccctcctggg 
                     cttcacattgccgttgcgattttcactggatctataagttgccctaaac 
                     ccgcggagggaagcgccgcaggggggggcgtcgtcggggggcgggcggc 


SPP00000033_1.0  277 MV--VSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGIL 
                     +   +S EE+E  Y  A  +M  LNR  A LM    AH ATD+TGFGIL 
                     IAGHISPEEIEELYNMATDSMRRLNREGARLMRKHGAHGATDVTGFGIL 
LmjF36_01_20050-4027 aggcatcggaggctaagagaacccacgggccacacggcggaggagtgac 
                     tcgatccaataataatccagtggtagagcgttgaagcagccatcgtgtt 
                     tagccccagcgagctgcgtcgatgccagtgggggccgcgcccgcctctg 


SPP00000033_1.0  324 GHSQNLAKQQR-----NEVSFVIHNLPIIAKMAAVSKA-SGRFGLLQGT 
                     GH+ N    Q        + +V+  LP++    A SK    ++ LL+G  
                     GHANNFGAAQAVGDAPRSLCLVLERLPMFKTAVAASKQMNDKYRLLEGY 
LmjF36_01_20050-3880 gcgaatgggcgggggcctctcgcgcccataaggggtacaagatcccggt 
                     gacaatgccactgaccgctgtttagtcttacctcccaataaaagttaga 
                     gcgcctgagaccttggcggtcaggggggcgctgccggggtcgcctcagc 


SPP00000033_1.0  367 SAETSGGLLICLPREQA-ARFCSEIKSSKYGEGHQAWIVGIVE       
                     SAETSGGLL+  P   A A FC+E+ +     G  +WIVG VE       
                     SAETSGGLLVAFPSTTAAAAFCAELTA--VDGGCPSWIVGHVE       
LmjF36_01_20050-3733 tggaaggccggtcaaaggggttggcag  ggggtcttaggcgg       
                     ccacgggtttctcgcccccctgcatcc  tagggccgttgata       
                     gcaaccgggggcgcccagggccggcgg  ctcgtgggtcgtgg       


//
>LmjF36_01_20050601_V5.2:subseq(2091000,6000).pep
FDPVSLGLPAEFQLTDYTRLKGCSCKLPQPKLLALLQELSATPGQKDVGMDCSIVPLHHT
NSKGEALFLVSTTDFFFPSVSDPFLQGQIGAANVLSDLYSMGIPDCDTMLMLLAASTEMD
EHERLITTREIMKGFAERARLATTTVTGGQTVMNPWPLIGGVAMAVVSEAEMVRPTGLLC
AGDILVLTKPLGCQVAVNLKQWLLRPSPLYEEAIAGHISPEEIEELYNMATDSMRRLNRE
GARLMRKHGAHGATDVTGFGILGHANNFGAAQAVGDAPRSLCLVLERLPMFKTAVAASKQ
MNDKYRLLEGYSAETSGGLLVAFPSTTAAAAFCAELTAVDGGCPSWIVGHVE
//
>LmjF36_01_20050601_V5.2:subseq(2091000,6000).[4666:3609].sp
TTCGACCCCGTCTCACTGGGCCTCCCTGCTGAGTTCCAGCTCACCGACTACACACGCCTG
AAGGGGTGCAGCTGTAAACTGCCACAGCCCAAGCTACTAGCCCTGCTGCAGGAACTCTCG
GCAACGCCTGGGCAGAAGGACGTCGGCATGGACTGCAGCATTGTGCCGCTGCACCACACC
AACAGCAAAGGTGAGGCTCTGTTCCTCGTCTCCACGACGGACTTCTTCTTCCCCAGTGTG
TCGGACCCGTTCCTGCAGGGTCAAATCGGGGCTGCAAACGTCTTGTCCGACCTGTATAGC
ATGGGCATCCCGGATTGTGATACAATGCTGATGTTGCTCGCGGCCAGCACCGAGATGGAC
GAGCATGAACGCCTGATTACGACGCGCGAAATCATGAAAGGCTTTGCAGAGCGGGCGCGG
TTGGCGACGACAACGGTGACAGGAGGGCAGACGGTCATGAACCCGTGGCCGCTGATTGGC
GGGGTGGCCATGGCCGTCGTGTCCGAGGCGGAAATGGTGCGGCCAACAGGGCTCTTGTGC
GCCGGGGACATATTGGTGCTGACGAAGCCGCTGGGGTGCCAGGTTGCCGTGAATCTCAAG
CAGTGGCTGCTGCGGCCCTCGCCGCTGTACGAGGAGGCCATTGCAGGGCACATCTCCCCC
GAAGAGATCGAGGAACTGTACAATATGGCCACGGATAGCATGCGACGTCTGAACCGCGAA
GGGGCTCGGCTGATGCGGAAGCACGGCGCGCACGGGGCCACCGACGTGACCGGCTTTGGC
ATTCTGGGGCACGCGAACAACTTTGGGGCAGCGCAAGCCGTCGGTGATGCGCCGCGCTCG
CTGTGTCTCGTACTGGAGCGGCTGCCGATGTTCAAGACCGCTGTGGCCGCCTCGAAGCAG
ATGAATGACAAGTACCGCCTTCTCGAAGGGTACTCGGCCGAAACAAGCGGCGGGCTGCTG
GTGGCGTTCCCGAGCACCACCGCAGCGGCGGCGTTCTGCGCGGAGCTCACGGCGGTCGAT
GGCGGGTGTCCGTCGTGGATTGTCGGGCATGTGGAG
//
LmjF36_01_20050601_V5.2:subseq(2091000,6000)    GeneWise        match   4666    3611    314.37  -       .       LmjF36_01_20050601_V5.2:subseq(209
1000,6000)-genewise-prediction-1
LmjF36_01_20050601_V5.2:subseq(2091000,6000)    GeneWise        cds     4666    3611    0.00    -       0       LmjF36_01_20050601_V5.2:subseq(209
1000,6000)-genewise-prediction-1
//