genewise output
Score -188.23 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
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SPP00000037_1.0 1 MASEGPREPESEGIKLSADVKPFVPRFAGLNVAW-LESSEACVFPSSAA
GP E E G + ++ G + L+ + F
GDIGGPFEMEGNGSQFQNMFNRLMEDSNGYRMEGSLQGIDEVEFRGDGK
subseq(11000,50 124 ggaggctgaggagactcaataataggaagtaaggttcgaggggtaggga
gatggctatagaggataattagttaagagagtagctagtaatatggaga
gttacatgggttatacgtgttagggccttcagactagatcgtatattaa
SPP00000037_1.0 49 TYYPFVQEPPVTEQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTL
+Y+ Y + G + PQ+ I +
SYWQHTSP--------YKFSSSQGVIDWKPQHQKLSIFEKNEFNDDFGC
subseq(11000,50 271 tttccatc tattttcggagtaccccactatgaagtaggtgt
cagaaccc aatcccagttagacaaaatcttaaaataaatgg
atgatata catttcaattcgagataattttagtgtttcttc
SPP00000037_1.0 98 DSTQNVYSVPGSQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKK
D N Y + Q L ++ Y G Q + N ++K L ++
DVPYNNYLINRGQQLRHK---YFGQQKLYGFPSNMSN--KQQKQLKQRN
subseq(11000,50 394 ggctaattaacgcccaca ttgccattgtctaaaa accactacca
atcaaaattaggaatgaa atgaaatagtccatga aaaaataaga
ctcctttgtcttagtacg ttcagaatattttgtt agaaggagtt
SPP00000037_1.0 147 TYDEKKTYDQQKFD-SERADGTISSEIKSARGSHHLSIYAENSLKSDGY
+ F+ +RA T S G+ + N L+ +
GVSP----NLENFEANQRAPNTYRS------GNLPILYNENNMLRCESN
subseq(11000,50 526 ggtc acgatggacagcaatca gatcattagaaacatgta
gtcc ataatacaagccacagg gatcttaaaaattggaca
tttg tagtcaataaagttcat atataattactgtacatt
SPP00000037_1.0 195 HKRTDRKSRIIAKNVSTSKPEFEFTTLDFPELQGAENNMSEIQKQPKWG
R SR KN S S T +P + N+ IQ G
MLR--QTSRSGKKNSSGS------LTGSMPNIP--LNSGLNIQNLNDQG
subseq(11000,50 643 atc caactgaaaaaga tagaacaac tatgtaacacagcg
ttg acggcgaaagggg tcggtcatc tacgtataataaag
gat agctctgactttc attcgattt atttactgtgtcga
SPP00000037_1.0 244 PVHSVSTDISLLREVVKPAAVLSKGEIVVKNNPNESVTANAATNSPSCT
V + R+ P + + N ++ S S
YVGVNQGQLQYCRKTCPP-------NCTIPTHINGNMFRR---KSGSGV
subseq(11000,50 760 tgggacgcccttaaatcc ataacacaagaataa atgtgg
atgtaagataaggacgcc agctccatagattgg acgcgt
tagtcagaagctggtttc ctattttttatgtgg atcaat
SPP00000037_1.0 293 RELSWTPMGYVVRQTLSTELSAAPKNVTSMINLKTIASSADPKNVSIPS
+ +G V + V+ +N +A S P IP
IPFNGNQLGLGVG---GGSMGVIGNGVSRSLN--DLAYSGMP---NIPI
subseq(11000,50 877 actagactgtggg ggtaggagaggtatca gtgttgac aaca
tctagaatgtgtg ggctgttgagtcgcta atcacgtc atct
tattatagagttt tttgagtttataatgt tgttttgc tttt
SPP00000037_1.0 342 SEALSSDPSYNKEKHIIHPTQKSKASQGSDLEQNEASRKNKKKKEKSTS
S S+ Y+K K S+ D N+ +RKN K+ S
SGL--SNQGYSK-----------KTSE--DAYYNKNNRKNAINHIKNNS
subseq(11000,50 1000 tgc aacgtta aatg ggttaaaacaagaacaaaaa
cgt gaagaca acca acaaaaaagaactaataaag
tta ctgtcta attg tttttgtcggtctttcgttc
SPP00000037_1.0 391 KYEVLTVQEPPRIEDAEEFPNLAVASERRDRIETPKFQSKQQPQDNFKN
F N+ + + + DN N
NASHSCNSN--MTGGMAGFGNMNIHNNFPAGSNSCTAGLSASSIDNSGN
subseq(11000,50 1102 agtcttata aaggaggtgaaaacaatcggaattaggtagttagatga
accacgaca tcggtcgtgatataaatccggacgccgtgccctaacga
ttttgtcat gactgaatttgctccctatatccttttatcttttttct
SPP00000037_1.0 440 NVKKSQLPVQLDLGGMLTALEKKQHSQHAKQSSKPVVVSVGAVPVLSKE
+ K+ L + AL AK SK G S
DASKNGLTPS-----SIAAL-------WAKAMSK-----TGGRTGFSNR
subseq(11000,50 1243 ggtaagcact taggt tgagaaa aggaagtaaa
accaagtccc ctcct gcactga cgggcgtgag
catatgtact attta gagagcg tctacatcta
SPP00000037_1.0 489 CASGERGRRMSQMKTPHNPLDSSAPLMKKGKQ--REIPKAKKPTSLKKI
G S +N +S + + K EI + +S
NKHGNSNSASSNTDVNNNGTNSGSANLTDSKNGANEIITCARFSS----
subseq(11000,50 1339 aacgatatgtaaaggaaagaatgtgatagtaaggagaaatgattt
aaagacacccgacataaagcacgccatcacaagcaattcgcgtcc
cacccatttatcacatctcactctatgtttgtactattactacca
SPP00000037_1.0 536 ILKERQERKQRLQENAVSPAFTSDDTQDGE-SGGDDQFPEQAELSGPEG
L+ R L+ T D + E GD+ + E
FLRNNSGRLHWLRV-MYHYLDTVDARKIREVNKGDNLCMVAVDDIALEA
subseq(11000,50 1474 ttaaatgacctcag atcttgagggaaacggaaggactagggggagcgg
ttgaacggtagtgt taaatactacgatgataagaatgttctaatctac
tagtcttattgtat gctcattgtcaattattacctttgtaattcaaat
SPP00000037_1.0 584 MDELISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRRFRDY
+ + SE G + ++ LA H + + +Y
VSRSFDPSECAYWSEPENGAFVHKNIR---LAVAHKVGHRTVASP-QNY
subseq(11000,50 1618 gtattgctgtgtttgcgaggtgcaaaa cgggcaggcaaggtc cat
tcgctaccagcagcacaagcttaaatg tctcaatgagctccc aaa
taaatcatatgcgaaaatattatgtta tttttatgtattgaa act
SPP00000037_1.0 633 CSQMLSKEVDACVTDLLKELVRFQDRMYQKDPVKAKTKR
+Q+L+ +D V+ LL L + DR+ V
VNQILTASLDHSVSILLNTLRAIDDRVRWMSTVVNSKNG
subseq(11000,50 1753 gacacagttgcagtattaatagaggcgctataggaaaag
taattccctaagtctttactgctaagtggtccttagaag
atgatgaaattcctcaactaattttctaggttttttata
SPP00000037_1.0 672 LVLGLREVLKHLKLKKLKCVIIS
+G+RE ++ L+ KKLK +I++
R:I[ata] FTVGVREAMRCLRHKKLKALIVA
subseq(11000,50 1870 AGTGGCTT Intron 1 GAGTAtagggaggaattacaacagcagg
<1-----[1871 : 2113]-1> tctgtgactggtgaaatactttc
cttataaagacaacaaagtattt
SPP00000037_1.0 696 PNCEKIQSKGGLDDTLHTIIDYACEQNIPFVFALNRKALGRSLNKAVPV
P+ E +G L + I+ A E NIP +FALNR +GR++ K + +
PDIEGDGVEGSLRHHVIHILLQAQELNIPTIFALNRHRIGRAMGKHMRM
subseq(11000,50 2185 cgagggggggacaccgacactcgcgtaacaatgcaaccagagagacaaa
catagagtaggtgaattatttacaatatccttctagagtggctgaatgt
atcgatgaaactactaatttagtgaattaattagtgtttaaaggacgag
SPP00000037_1.0 745 SVVGIFSYDGAQDQFHKMVELTVAARQAYKTMLENVQQELVGEPRPQAP
SV+G++S G + QF + R+ Y +EN P +
SVLGLLSIRGVEKQFQAISHTAQLLRKLYHFCIENNLP-----PTEETF
subseq(11000,50 2332 agtgcctaagggactcgatcagcttcactcttagaatc caggat
gttgttctggtaaatactcaccattgataatgtaaatc ccaact
ttacttatacagaacaattttcgaacatcttcagttgt gtgaac
SPP00000037_1.0 794 PSLPTQGPSCPAEDGPPALKEKEEPHYIEIWKKHLEAYSGCTLELEESL
L + S + AL + ++KK Y L ++
KKLSSS!ISINSFRLYLALIIIIIQQALSVFKKKRSIYK-FILFKTITM
subseq(11000,50 2464 aacttt4ataattctttgtaaaaaccgttgtaaaaaata tattaaaaa
aatccc tctactgtatcttttttaactcttaaaggtaa ttttactct
aatcta aattcttgtaagaatttaagacataaagctca ttgcgatgg
SPP00000037_1.0 843 EASTSQMMNLNL
+ T+ ++L
DKYTAHYLHLYR
subseq(11000,50 2609 gatagcttctta
aaaccaatatag
tatatttatgca
//
Gene 1
Gene 124 2481
Exon 124 1870 phase 0
Exon 2114 2481 phase 1
Gene 2
Gene 2486 2644
Exon 2486 2644 phase 0
//
>subseq(11000,5000).[124:2481].sp.tr
GDIGGPFEMEGNGSQFQNMFNRLMEDSNGYRMEGSLQGIDEVEFRGDGKSYWQHTSPYKF
SSSQGVIDWKPQHQKLSIFEKNEFNDDFGCDVPYNNYLINRGQQLRHKYFGQQKLYGFPS
NMSNKQQKQLKQRNGVSPNLENFEANQRAPNTYRSGNLPILYNENNMLRCESNMLRQTSR
SGKKNSSGSLTGSMPNIPLNSGLNIQNLNDQGYVGVNQGQLQYCRKTCPPNCTIPTHING
NMFRRKSGSGVIPFNGNQLGLGVGGGSMGVIGNGVSRSLNDLAYSGMPNIPISGLSNQGY
SKKTSEDAYYNKNNRKNAINHIKNNSNASHSCNSNMTGGMAGFGNMNIHNNFPAGSNSCT
AGLSASSIDNSGNDASKNGLTPSSIAALWAKAMSKTGGRTGFSNRNKHGNSNSASSNTDV
NNNGTNSGSANLTDSKNGANEIITCARFSSFLRNNSGRLHWLRVMYHYLDTVDARKIREV
NKGDNLCMVAVDDIALEAVSRSFDPSECAYWSEPENGAFVHKNIRLAVAHKVGHRTVASP
QNYVNQILTASLDHSVSILLNTLRAIDDRVRWMSTVVNSKNGIFTVGVREAMRCLRHKKL
KALIVAPDIEGDGVEGSLRHHVIHILLQAQELNIPTIFALNRHRIGRAMGKHMRMSVLGL
LSIRGVEKQFQAISHTAQLLRKLYHFCIENNLPPTEETFKKLSSS
>subseq(11000,5000).[2486:2644].sp.tr
ISINSFRLYLALIIIIIQQALSVFKKKRSIYKFILFKTITMDKYTAHYLHLYR
//
>subseq(11000,5000).[124:2481].sp
GGGGATATTGGAGGCCCATTTGAGATGGAGGGTAATGGAAGTCAATTCCAGAATATGTTT
AATAGATTGATGGAGGACAGCAATGGTTACAGAATGGAAGGCTCTTTACAGGGAATTGAC
GAGGTTGAATTTAGAGGTGATGGAAAATCATATTGGCAACATACATCTCCATACAAATTT
TCTTCTTCCCAAGGAGTTATTGACTGGAAACCGCAACATCAAAAACTTTCTATTTTTGAA
AAGAATGAGTTTAATGATGACTTTGGTTGCGACGTTCCCTACAATAATTATTTGATTAAC
CGTGGTCAACAGCTTAGACACAAGTATTTTGGCCAACAGAAATTATATGGATTTCCTTCT
AATATGAGTAATAAACAGCAAAAACAGTTGAAACAGCGTAATGGTGTTTCTCCGAATCTA
GAGAATTTCGAAGCAAATCAAAGAGCACCGAATACTTACCGAAGTGGAAATTTACCTATA
TTATATAATGAAAACAATATGCTTAGATGCGAATCTAATATGTTACGTCAAACGAGCCGT
TCCGGTAAGAAAAACAGTAGTGGTAGCTTAACTGGTAGCATGCCAAATATTCCTTTAAAT
TCTGGTTTAAACATTCAGAATCTGAATGACCAGGGATATGTAGGGGTTAACCAAGGGCAA
CTACAGTACTGTAGGAAGACTTGTCCTCCCAACTGTACAATTCCTACTCATATTAATGGA
AATATGTTTAGGAGGAAATCTGGCTCAGGAGTTATTCCATTTAATGGAAATCAATTGGGA
TTGGGTGTTGGTGGTGGTTCTATGGGAGTGATTGGTAATGGAGTTTCAAGATCTCTGAAT
GATTTGGCTTATTCTGGTATGCCCAATATTCCTATTTCTGGTCTAAGCAATCAGGGTTAC
TCTAAAAAAACTTCTGAGGATGCTTATTATAATAAGAATAACCGGAAGAATGCCATTAAT
CATATCAAGAATAATAGCAATGCTTCTCATTCGTGTAACTCAAATATGACAGGCGGTATG
GCAGGATTTGGTAATATGAACATTCACAACAACTTTCCAGCTGGAAGTAACTCCTGTACT
GCTGGTTTAAGTGCCTCTTCTATTGATAATTCTGGCAATGACGCATCTAAAAATGGGCTT
ACACCCTCTTCAATTGCTGCTTTATGGGCAAAGGCAATGAGCAAGACTGGCGGTAGAACC
GGATTTAGCAATAGAAACAAACACGGCAACTCAAATTCTGCTTCAAGTAACACAGACGTA
AATAACAATGGCACAAACTCTGGCTCTGCAAATTTGACTGATTCTAAGAATGGAGCCAAT
GAAATTATTACATGCGCTAGATTCTCCTCATTTTTAAGGAATAACTCTGGTAGACTTCAT
TGGCTTAGAGTTATGTACCATTACTTAGATACTGTGGATGCCAGAAAAATTCGTGAAGTT
AATAAAGGCGACAATCTTTGTATGGTTGCAGTAGATGATATCGCACTAGAAGCTGTTTCA
AGATCATTTGACCCATCTGAATGTGCGTACTGGTCAGAACCAGAAAATGGAGCTTTTGTA
CATAAGAATATTAGACTTGCTGTTGCTCATAAAGTTGGGCATAGAACTGTTGCGTCACCA
CAAAACTATGTAAATCAGATACTTACGGCATCATTAGATCATAGCGTCTCTATCTTATTA
AACACTTTAAGAGCTATTGATGATCGCGTTCGATGGATGTCTACTGTTGTTAATAGTAAA
AATGGAATATTCACTGTTGGAGTTAGAGAAGCAATGAGATGCTTAAGACACAAAAAACTA
AAGGCTCTAATTGTTGCTCCAGATATCGAGGGAGATGGGGTAGAAGGAAGCCTTAGACAC
CATGTAATACATATTCTTTTACAGGCTCAGGAATTAAATATTCCAACAATTTTTGCACTG
AATAGGCATCGTATTGGAAGAGCAATGGGGAAACACATGAGAATGAGTGTTTTAGGCCTT
CTTTCAATTAGAGGCGTAGAGAAACAATTCCAAGCAATTTCTCATACTGCCCAGTTATTA
CGCAAACTTTACCATTTTTGCATAGAGAATAATTTGCCTCCGACTGAGGAAACATTCAAA
AAACTTTCCTCTTCA
>subseq(11000,5000).[2486:2644].sp
ATATCAATTAATTCCTTTCGTTTGTATTTAGCATTGATAATAATTATTATTCAACAAGCG
TTATCCGTATTTAAAAAAAAAAGGAGCATTTACAAATTTATTTTGTTCAAGACAATTACG
ATGGATAAATATACAGCTCATTATTTACATTTGTACAGA
//