Thank you for using Match at Host paris.upf.edu - It's Thu, 30.3.2006 - 17:4 MEZ 


  The name of your search is:   default


  Search for sites by WeightMatrix library:  matrixTFP60.lib
  Sequence file:  default.seq
  Matrix groups:  all
  Cut-offs:  to minimize false positive matches


Scanning sequence ID:   PROM 2659; 


View a of the following search results
matrix                    position  core   matrix sequence (always the               factor name
identifier                (strand)  match  match  (+)-strand is shown)

V$STAT_01                   28 (-)  1.000  1.000  ttccGGGAA                          STATx
V$NKX25_02                 177 (+)  1.000  1.000  ctTAATTg                           Nkx2-5
V$VMYB_01                  219 (+)  1.000  0.981  agtAACGGaa                         v-Myb
V$COMP1_01                 269 (-)  1.000  0.843  gaattccttttgtCAATCttattg           COMP1
V$OCT1_Q6                  481 (-)  0.909  0.893  cagaTTTACattaac                    Oct-1


Scanning sequence ID:   PROM Frankia; 


View a of the following search results
No sites found for this sequence


Scanning sequence ID:   PROM pRi1724; 


View a of the following search results
matrix                    position  core   matrix sequence (always the               factor name
identifier                (strand)  match  match  (+)-strand is shown)

V$NKX25_02                 119 (+)  1.000  1.000  ctTAATTg                           Nkx2-5
V$VMYB_01                  161 (+)  1.000  0.981  agtAACGGaa                         v-Myb
V$COMP1_01                 211 (-)  1.000  0.812  gaattccgtttgtCAATCttattg           COMP1
V$OCT1_Q6                  424 (-)  0.909  0.893  cagaTTTACattaac                    Oct-1
I$BRCZ4_01                 450 (+)  1.000  0.975  tctATAAAcaaaa                      BR-C Z4


Scanning sequence ID:   PROM SAKURA; 


View a of the following search results
matrix                    position  core   matrix sequence (always the               factor name
identifier                (strand)  match  match  (+)-strand is shown)

I$ELF1_01                   46 (+)  1.000  0.986  tttaatGGTTTtgcag                   Elf-1
V$HNF3B_01                 197 (-)  1.000  0.965  taaatAAATAtaccg                    HNF-3beta
V$HNF4_01                  207 (-)  1.000  0.906  taccgcgCTTTGacccaaa                HNF-4
V$COMP1_01                 400 (-)  0.914  0.829  tccattgggatgtCAATGaacagt           COMP1
F$HSF_03                   416 (+)  0.961  0.882  TGAACagtatgttcc                    HSF


Scanning sequence ID:   PROM C58; 


View a of the following search results
matrix                    position  core   matrix sequence (always the               factor name
identifier                (strand)  match  match  (+)-strand is shown)

V$E2F_02                     2 (+)  1.000  1.000  ttTGGCGc                           E2F
I$ELF1_01                   48 (+)  1.000  0.986  tttaatGGTTTtgcag                   Elf-1
V$HNF3B_01                 199 (-)  1.000  0.965  taaatAAATAtaccg                    HNF-3beta
V$COMP1_01                 400 (-)  0.914  0.829  tccattgggatgtCAATGaacagt           COMP1
F$HSF_03                   416 (+)  0.961  0.882  TGAACagtatgttcc                    HSF




 Total sequences length=2505
 Total number of sites found=20
 Frequency of sites per nucleotide=0.007984