INFO: [blastsrv4.REAL]: Error: CPU usage limit was exceeded, resulting in SIGXCPU (24).

TBLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1142811046-5635-119375158370.BLASTQ4


Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
           3,793,279 sequences; 16,835,315,887 total letters
 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports


Query=  gi|38985|emb|X03433.1|ARTLROLB A. rhizogenes pRiA4 plasmid TL-DNA rolB-C 
genes
Length=2949

                                                                   Score     E
Sequences producing significant alignments:                        (Bits)  Value   N

gi|38985|emb|X03433.1|ARTLROLB  A. rhizogenes pRiA4 plasmid TL-DN  2020    0.0     1 
gi|468518|emb|X64255.1|ARROLDNA  A.rhizogenes genes rolA, rolB, r   433    0.0     7   
gi|2440224|dbj|AB006689.1|  Agrobacterium rhizogenes plasmid p...   433    0.0     7   
gi|599608|emb|Z29365.1|ARCUCROL  A.rhizogenes (NCPPB2659) DNA ...   417    0.0     7 
gi|6706117|emb|AJ271050.1|ARH271050  Agrobacterium rhizogenes ...   417    0.0     7 
gi|10567310|dbj|AP002086.1|  Agrobacterium rhizogenes plasmid pRi   433    0.0     6 
gi|73810201|gb|DQ160187.1|  Agrobacterium rhizogenes strain A4...   428    2e-158  2 
gi|142245|gb|M60490.1|ATUORF  Agrobacterium rhizogenes ORFs 10...   335    7e-160  10
gi|38971|emb|X15952.1|AROLBTR  Agrobacterium rhizogenes Ri plasmi   152    2e-47   2 
gi|6498173|dbj|AB016260.1|  Agrobacterium tumefaciens plasmid pTi  37.5    6e-04   2 
gi|5042179|emb|AJ237588.1|ATU237588  Agrobacterium tumefaciens Ti  37.5    6e-04   2 
gi|16271968|gb|AE007926.2|  Agrobacterium tumefaciens str. C58...  37.5    6e-04   2   
gi|17744012|gb|AE009418.1|  Agrobacterium tumefaciens str. C58...  37.5    6e-04   2   
gi|4836559|gb|AF126445.1|AF126445  Agrobacterium tumefaciens p...  37.5    6e-04   2   
gi|3059178|dbj|D88013.1|  Rhodococcus erythropolis DNA for hyd...  32.2    0.005   3 
gi|74055513|gb|CP000116.1|  Thiobacillus denitrificans ATCC 25259  35.8    0.53    3 
gi|84619188|emb|AM156932.1|  Streptomyces steffisburgensis clu...  37.5    0.021   3 
gi|89343559|gb|CP000267.1|  Rhodoferax ferrireducens DSM 15236, c  44.7    0.027   1 
gi|77968738|gb|CP000152.1|  Burkholderia sp. 383 chromosome 2, co  38.8    0.26    2 
gi|83574254|gb|CP000230.1|  Rhodospirillum rubrum ATCC 11170, com  30.2    0.080   2 
gi|41400296|gb|AE016958.1|  Mycobacterium avium subsp. paratub...  38.8    1.7     1 
gi|5360065|gb|AF159689.1|AF159689  Myxococcus xanthus DnaK sup...  35.5    0.14    2 
gi|61661472|gb|AY943953.1|  Streptomyces sp. FQ1 plasmid pFP1, co  39.1    0.25    2 
gi|55420455|gb|AY772007.1|  Nocardioides sp. JS614 putative PA...  34.2    0.26    3 
gi|8050835|gb|AF263912.1|AF263912  Streptomyces noursei ATCC 1...  33.2    0.34    3 
gi|60650890|gb|AY787762.1|  Streptomyces filamentosus strain N...  39.8    0.46    2 
gi|836905|gb|U18082.1|SPU18082  Streptomyces peucetius daunoru...  34.2    0.48    2 
gi|54013472|dbj|AP006618.1|  Nocardia farcinica IFM 10152 DNA, co  37.1    0.50    3 
gi|57546753|dbj|BA000030.2|  Streptomyces avermitilis MA-4680 gen  37.8    0.54    2 
gi|56676665|gb|CP000031.1|  Silicibacter pomeroyi DSS-3, complete  40.1    0.67    1 
gi|85772941|gb|CP000251.1|  Anaeromyxobacter dehalogenans 2CP-C,   40.1    0.67    1 
gi|77386383|gb|CP000143.1|  Rhodobacter sphaeroides 2.4.1 chromos  40.1    0.67    1 
gi|68342549|gb|CP000076.1|  Pseudomonas fluorescens Pf-5, complet  40.1    0.67    1 
gi|78165794|gb|CP000096.1|  Pelodictyon luteolum DSM 273, complet  34.2    0.68    2 
gi|47118316|dbj|BA000040.2|  Bradyrhizobium japonicum USDA 110 DN  37.1    5.3     1 
gi|83652219|gb|CP000086.1|  Burkholderia thailandensis E264 chrom  39.8    0.84    1 
gi|17427008|emb|AL646057.1|  Ralstonia solanacearum GMI1000 ch...  39.8    0.84    1 
gi|1419202|emb|X98692.1|RSFLIFGEN  R.sphaeroides fliF gene         39.8    0.84    1 
gi|77389406|gb|CP000144.1|  Rhodobacter sphaeroides 2.4.1 chromos  36.8    0.85    2 
gi|66801982|gb|DQ010751.1|  Unidentified bacterium clone 7g55 ...  39.5    1.1     1 
gi|37508091|dbj|BA000045.2|  Gloeobacter violaceus PCC 7421 DNA,   39.5    1.1     1 
gi|8572673|gb|AF242881.1|AF242881  Agrobacterium tumefaciens o...  39.5    1.1     1 
gi|76155076|gb|DQ187948.1|  Pseudomonas putida strain IFO12996 es  31.9    1.2     3 
gi|15160354|gb|AE008377.1|  Agrobacterium tumefaciens str. C58...  34.2    1.3     2   
gi|17741414|gb|AE009236.1|  Agrobacterium tumefaciens str. C58...  34.2    1.3     2   
gi|86565586|gb|CP000249.1|  Frankia sp. CcI3, complete genome      31.2    1.4     2 
gi|83423383|emb|CT005238.2|  Methylocapsa acidiphila B2, overl...  34.5    1.6     2 
gi|21106752|gb|AE011693.1|  Xanthomonas axonopodis pv. citri s...  38.8    1.7     1   
gi|78192483|gb|CP000148.1|  Geobacter metallireducens GS-15, comp  24.6    1.7     3 
gi|84365597|dbj|AP008229.1|  Xanthomonas oryzae pv. oryzae MAFF 3  28.6    5.8     2 
gi|47118314|dbj|BA000035.2|  Corynebacterium efficiens YS-314 DNA  29.2    1.8     2 
gi|78196017|gb|CP000110.1|  Synechococcus sp. CC9605, complete ge  38.5    2.1     1 
gi|76577973|gb|CP000124.1|  Burkholderia pseudomallei 1710b chrom  38.5    2.1     1 
gi|71845263|gb|CP000089.1|  Dechloromonas aromatica RCB, complete  38.5    2.1     1 
gi|42794855|gb|AY498874.1|  Streptomyces lavendulae linear pla...  28.9    2.2     2 
gi|71914138|gb|CP000088.1|  Thermobifida fusca YX, complete genom  27.6    2.2     2 
gi|50950407|gb|AE016822.1|  Leifsonia xyli subsp. xyli str. CTCB0  37.5    4.2     1 
gi|51854827|dbj|AP006840.1|  Symbiobacterium thermophilum IAM 148  38.1    2.5     2 
gi|58424217|gb|AE013598.1|  Xanthomonas oryzae pv. oryzae KACC103  27.6    2.6     2 
gi|82943940|dbj|AP007255.1|  Magnetospirillum magneticum AMB-1 DN  38.1    2.6     1 
gi|50952454|gb|AE000516.2|  Mycobacterium tuberculosis CDC1551, c  38.1    2.6     1 
gi|3293232|gb|U96413.1|ATU96413  Agrobacterium tumefaciens pTi...  38.1    2.6     1 
gi|5669524|gb|AF161186.1|AF161186  Burkholderia pyrrocinia try...  33.2    2.9     2 
gi|18029502|gb|AF389112.1|AF389112  Rhizobium sp. NGR234, cosmid   32.8    3.0     3 
gi|18077099|emb|AJ344068.1|PPU344068  Pseudomonas putida plasmid   30.9    3.1     2 
gi|73854091|gb|CP000038.1|  Shigella sonnei Ss046, complete genom  36.8    6.6     1 
gi|34105712|gb|AE016825.1|  Chromobacterium violaceum ATCC 12472,  27.2    3.2     2 
gi|86279771|gb|CP000133.1|  Rhizobium etli CFN 42, complete genom  31.9    3.3     2 
gi|81294637|emb|AJ891267.1|  Bradyrhizobium sp. BDV5057 partia...  30.2    3.3     2 
gi|34766435|gb|AY310323.1|  Streptomyces sp. FR-008 heptaene m...  36.8    3.3     2 
gi|72117119|gb|CP000090.1|  Ralstonia eutropha JMP134 chromosome   28.2    3.3     2 
gi|52426793|gb|CP000010.1|  Burkholderia mallei ATCC 23344 chromo  37.8    3.3     1 
gi|11230852|gb|AF013993.2|AF013993  Burkholderia cepacia L-orn...  37.8    3.3     1 
gi|13620485|emb|AL590463.1|SCO590463  Streptomyces coelicolor pla  24.3    3.4     3 
gi|150968|gb|M18278.1|PSEACYII  Pseudomonas sp. cephalosporin ...  32.8    3.7     3 
gi|56384585|gb|AE005174.2|  Escherichia coli O157:H7 EDL933, comp  27.9    3.9     2 
gi|47118301|dbj|BA000007.2|  Escherichia coli O157:H7 DNA, comple  27.9    3.9     2 
gi|26111730|gb|AE014075.1|  Escherichia coli CFT073, complete gen  27.9    3.9     2 
gi|66571684|gb|CP000050.1|  Xanthomonas campestris pv. campest...  29.2    3.9     2 
gi|9950500|gb|AE004844.1|  Pseudomonas aeruginosa PAO1, sectio...  31.2    3.9     3 
gi|24080789|gb|AE005674.1|  Shigella flexneri 2a str. 301, comple  27.9    4.0     2 
gi|30043918|gb|AE014073.1|  Shigella flexneri 2a str. 2457T, comp  27.9    4.0     2 
gi|81244029|gb|CP000036.1|  Shigella boydii Sb227, complete genom  27.9    4.0     2 
gi|81239530|gb|CP000034.1|  Shigella dysenteriae Sd197, complete   27.9    4.0     2 
gi|66967517|gb|CP000011.2|  Burkholderia mallei ATCC 23344 chromo  36.8    4.0     2 
gi|74419069|gb|CP000115.1|  Nitrobacter winogradskyi Nb-255, comp  29.2    4.1     2 
gi|71553748|gb|CP000058.1|  Pseudomonas syringae pv. phaseolicola  37.5    4.2     1 
gi|6626258|gb|AE000520.1|  Treponema pallidum subsp. pallidum str  29.5    4.7     2 
gi|78033986|emb|AM039952.1|  Xanthomonas campestris pv. vesicator  36.8    4.9     2 
gi|6636058|gb|AF169590.1|AF169590  Sinorhizobium terangae glut...  34.5    4.9     2 
gi|46451220|gb|AE017285.1|  Desulfovibrio vulgaris subsp. vulg...  28.2    5.0     2 
gi|83755449|gb|CP000159.1|  Salinibacter ruber DSM 13855, complet  29.5    9.0     2 
gi|83649860|gb|CP000085.1|  Burkholderia thailandensis E264 ch...  30.2    5.1     2 
gi|9946332|gb|AE004485.1|  Pseudomonas aeruginosa PAO1, sectio...  33.2    5.2     2   
gi|77380231|gb|CP000094.1|  Pseudomonas fluorescens PfO-1, comple  37.1    5.3     1 
gi|28856110|gb|AE016853.1|  Pseudomonas syringae pv. tomato str.   37.1    5.3     1 
gi|9280381|gb|AF235504.1|AF235504  Streptomyces hygroscopicus ...  37.1    5.3     1 
gi|26278909|gb|AY113828.1|  Uncultured bacterium clone D13 put...  37.1    5.3     1 
gi|47118328|dbj|BA000012.4|  Mesorhizobium loti MAFF303099 DNA, c  29.9    9.9     2 
gi|63253978|gb|CP000075.1|  Pseudomonas syringae pv. syringae B72  29.2    8.4     2 

Alignments
>gi|38985|emb|X03433.1|ARTLROLB  A. rhizogenes pRiA4 plasmid TL-DNA rolB-C genes
Length=2949

 Score = 2020 bits (6103),  Expect = 0.0
 Identities = 983/983 (100%), Positives = 983/983 (100%), Gaps = 0/983 (0%)
 Frame = +1/+1

Query  1     FKKSAMKSSIQLLNQILIFITLILLKGKQVTHSASPDIKLVSPSTNH*PIANLHSPCLTN  180
             FKKSAMKSSIQLLNQILIFITLILLKGKQVTHSASPDIKLVSPSTNH*PIANLHSPCLTN
Sbjct  1     FKKSAMKSSIQLLNQILIFITLILLKGKQVTHSASPDIKLVSPSTNH*PIANLHSPCLTN  180

Query  181   SPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK*ALRIGSA*PKKPDACL  360
             SPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK*ALRIGSA*PKKPDACL
Sbjct  181   SPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK*ALRIGSA*PKKPDACL  360

Query  361   SPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQST*RYSSPWPTDPPSSSI  540
             SPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQST*RYSSPWPTDPPSSSI
Sbjct  361   SPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQST*RYSSPWPTDPPSSSI  540

Query  541   SID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHRSSSAMLTK*ETGCLYP*  720
             SID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHRSSSAMLTK*ETGCLYP*
Sbjct  541   SID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHRSSSAMLTK*ETGCLYP*  720

Query  721   LEASKLFIIQSS*RIGANNKNI*VRYRSTNLLINGCGCRCSTSPRCANIEGTPACF*LFL  900
             LEASKLFIIQSS*RIGANNKNI*VRYRSTNLLINGCGCRCSTSPRCANIEGTPACF*LFL
Sbjct  721   LEASKLFIIQSS*RIGANNKNI*VRYRSTNLLINGCGCRCSTSPRCANIEGTPACF*LFL  900

Query  901   LIRFKAQRPT*GNRFCPPIMVVCGLWNLSFCFFL**WDAPAYLYLCCGKALLCQAKPHVR  1080
             LIRFKAQRPT*GNRFCPPIMVVCGLWNLSFCFFL**WDAPAYLYLCCGKALLCQAKPHVR
Sbjct  901   LIRFKAQRPT*GNRFCPPIMVVCGLWNLSFCFFL**WDAPAYLYLCCGKALLCQAKPHVR  1080

Query  1081  PVGTKATQLAIYYRVS*KHVHGHHSFLG*LLFALLIYFLLNSETEIIVLHPLN*CKFGIY  1260
             PVGTKATQLAIYYRVS*KHVHGHHSFLG*LLFALLIYFLLNSETEIIVLHPLN*CKFGIY
Sbjct  1081  PVGTKATQLAIYYRVS*KHVHGHHSFLG*LLFALLIYFLLNSETEIIVLHPLN*CKFGIY  1260

Query  1261  L*QVLQNHVFPFGIIYSTR*SLKRIPD*KRLTHIIIAIINTSFWHR*FPHYITYTMLVIN  1440
             L*QVLQNHVFPFGIIYSTR*SLKRIPD*KRLTHIIIAIINTSFWHR*FPHYITYTMLVIN
Sbjct  1261  L*QVLQNHVFPFGIIYSTR*SLKRIPD*KRLTHIIIAIINTSFWHR*FPHYITYTMLVIN  1440

Query  1441  MIVAILYILTRK*KKYLECSNLHVCQCAFAKSNSGPTLSFTPLLPIMGILF*HPFAKAKQ  1620
             MIVAILYILTRK*KKYLECSNLHVCQCAFAKSNSGPTLSFTPLLPIMGILF*HPFAKAKQ
Sbjct  1441  MIVAILYILTRK*KKYLECSNLHVCQCAFAKSNSGPTLSFTPLLPIMGILF*HPFAKAKQ  1620

Query  1621  HDKKKQTQYYEPMNDHACSIFA*SRF*GLPCLAHRS*CDCCQTTSGFPDQRLCLIGASFR  1800
             HDKKKQTQYYEPMNDHACSIFA*SRF*GLPCLAHRS*CDCCQTTSGFPDQRLCLIGASFR
Sbjct  1621  HDKKKQTQYYEPMNDHACSIFA*SRF*GLPCLAHRS*CDCCQTTSGFPDQRLCLIGASFR  1800

Query  1801  RRILNGPGTCLFRNYPTHITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDY  1980
             RRILNGPGTCLFRNYPTHITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDY
Sbjct  1801  RRILNGPGTCLFRNYPTHITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDY  1980

Query  1981  SKPLLHFQKRWALAVLDLKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHV  2160
             SKPLLHFQKRWALAVLDLKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHV
Sbjct  1981  SKPLLHFQKRWALAVLDLKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHV  2160

Query  2161  FVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDL  2340
             FVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDL
Sbjct  2161  FVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDL  2340

Query  2341  ECFIAIFASSLFIHLLELKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGI  2520
             ECFIAIFASSLFIHLLELKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGI
Sbjct  2341  ECFIAIFASSLFIHLLELKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGI  2520

Query  2521  SRPAASSPEPDLTLRLSGPDQEGEEGVMKPAAVNLKKEA*SRLELPLQATFIYEFVISSM  2700
             SRPAASSPEPDLTLRLSGPDQEGEEGVMKPAAVNLKKEA*SRLELPLQATFIYEFVISSM
Sbjct  2521  SRPAASSPEPDLTLRLSGPDQEGEEGVMKPAAVNLKKEA*SRLELPLQATFIYEFVISSM  2700

Query  2701  YPPAVCDTEPWEL*RTL*CVDLFSCTKYFLLC*SCC*ILPKTAHAHMTI*STTHILQYQQ  2880
             YPPAVCDTEPWEL*RTL*CVDLFSCTKYFLLC*SCC*ILPKTAHAHMTI*STTHILQYQQ
Sbjct  2701  YPPAVCDTEPWEL*RTL*CVDLFSCTKYFLLC*SCC*ILPKTAHAHMTI*STTHILQYQQ  2880

Query  2881  QRHTWTYNIIVQQYI*HKTFSRH  2949
             QRHTWTYNIIVQQYI*HKTFSRH
Sbjct  2881  QRHTWTYNIIVQQYI*HKTFSRH  2949


 Score = 2018 bits (6097),  Expect = 0.0
 Identities = 983/983 (100%), Positives = 983/983 (100%), Gaps = 0/983 (0%)
 Frame = -1/-1

Query  2949  MS*KCFMSNVLLNYNIISPGVSLLLILQYMCSRLDSHMSMCCFWQNSAAGSTQKKIFSTR  2770
             MS*KCFMSNVLLNYNIISPGVSLLLILQYMCSRLDSHMSMCCFWQNSAAGSTQKKIFSTR
Sbjct  2949  MS*KCFMSNVLLNYNIISPGVSLLLILQYMCSRLDSHMSMCCFWQNSAAGSTQKKIFSTR  2770

Query  2769  K*VNTLQRTLQLPRFCVTDCGRVHRTYDKLIDKGCLQGEFKSALGFFLQVYCSRLHDALL  2590
             K*VNTLQRTLQLPRFCVTDCGRVHRTYDKLIDKGCLQGEFKSALGFFLQVYCSRLHDALL
Sbjct  2769  K*VNTLQRTLQLPRFCVTDCGRVHRTYDKLIDKGCLQGEFKSALGFFLQVYCSRLHDALL  2590

Query  2589  AFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAVFSPSPQKEGASYLSPV  2410
             AFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAVFSPSPQKEGASYLSPV
Sbjct  2589  AFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAVFSPSPQKEGASYLSPV  2410

Query  2409  NVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLLEGELAPIWLNRCRQHG  2230
             NVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLLEGELAPIWLNRCRQHG
Sbjct  2409  NVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLLEGELAPIWLNRCRQHG  2230

Query  2229  LHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIADFVLQELS*LFKYIYR  2050
             LHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIADFVLQELS*LFKYIYR
Sbjct  2229  LHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIADFVLQELS*LFKYIYR  2050

Query  2049  WRVFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAPCWSEIYWLKSWKE*QF  1870
             WRVFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAPCWSEIYWLKSWKE*QF
Sbjct  2049  WRVFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAPCWSEIYWLKSWKE*QF  1870

Query  1869  GIHCDVSWIVTKKASARAI*NTASETGANQTQSLVGKARGSLATITSRSMRKTREALKSG  1690
             GIHCDVSWIVTKKASARAI*NTASETGANQTQSLVGKARGSLATITSRSMRKTREALKSG
Sbjct  1869  GIHCDVSWIVTKKASARAI*NTASETGANQTQSLVGKARGSLATITSRSMRKTREALKSG  1690

Query  1689  SSENTACVIVHGFIVLGLLFLVVLFGLSERMSKKDAHNWEEWGKA*SWPAIGFRESALAN  1510
             SSENTACVIVHGFIVLGLLFLVVLFGLSERMSKKDAHNWEEWGKA*SWPAIGFRESALAN
Sbjct  1689  SSENTACVIVHGFIVLGLLFLVVLFGLSERMSKKDAHNWEEWGKA*SWPAIGFRESALAN  1510

Query  1509  VKIAAFKILFLFSG*DVKYCHNHINY*HCICNIVRKLSMPK*CINNSNNNMC*SFSIGNT  1330
             VKIAAFKILFLFSG*DVKYCHNHINY*HCICNIVRKLSMPK*CINNSNNNMC*SFSIGNT
Sbjct  1509  VKIAAFKILFLFSG*DVKYCHNHINY*HCICNIVRKLSMPK*CINNSNNNMC*SFSIGNT  1330

Query  1329  FKRLSC*INYSKRKYMVLENLL*IYAKFTLV*WVQNYYLCF*V**KINKQGE*QLA*EGM  1150
             FKRLSC*INYSKRKYMVLENLL*IYAKFTLV*WVQNYYLCF*V**KINKQGE*QLA*EGM
Sbjct  1329  FKRLSC*INYSKRKYMVLENLL*IYAKFTLV*WVQNYYLCF*V**KINKQGE*QLA*EGM  1150

Query  1149  VAMYVLLRDPIINCQLCCFGADRPNVGFSLTK*RLSAA*IKVGGCVPLLKEKAKAEIP*T  970
             VAMYVLLRDPIINCQLCCFGADRPNVGFSLTK*RLSAA*IKVGGCVPLLKEKAKAEIP*T
Sbjct  1149  VAMYVLLRDPIINCQLCCFGADRPNVGFSLTK*RLSAA*IKVGGCVPLLKEKAKAEIP*T  970

Query  969   TNHHYWRTEPIPSRGSLSFKPNK*KQLKAGRCPFYIRTTRRRGASTAASIN**ICGPIPN  790
             TNHHYWRTEPIPSRGSLSFKPNK*KQLKAGRCPFYIRTTRRRGASTAASIN**ICGPIPN
Sbjct  969   TNHHYWRTEPIPSRGSLSFKPNK*KQLKAGRCPFYIRTTRRRGASTAASIN**ICGPIPN  790

Query  789   SNIFIICSNTLRALDYK*FGCFELWVQATCFLLC*HG*RRPVFSLFQAQSGGCDKQR*AS  610
             SNIFIICSNTLRALDYK*FGCFELWVQATCFLLC*HG*RRPVFSLFQAQSGGCDKQR*AS
Sbjct  789   SNIFIICSNTLRALDYK*FGCFELWVQATCFLLC*HG*RRPVFSLFQAQSGGCDKQR*AS  610

Query  609   *THEERLK*A*TLDRAG*ESIDGY*RRRRVGGPRAAVPLRRLPDDDALLLWRVLALQLDA  430
             *THEERLK*A*TLDRAG*ESIDGY*RRRRVGGPRAAVPLRRLPDDDALLLWRVLALQLDA
Sbjct  609   *THEERLK*A*TLDRAG*ESIDGY*RRRRVGGPRAAVPLRRLPDDDALLLWRVLALQLDA  430

Query  429   RRTPHQPSPVPA*CDSR*GQ*RAQASIRFFRLRGSYAERLLRCIFFPWACHQAE*ADGAN  250
             RRTPHQPSPVPA*CDSR*GQ*RAQASIRFFRLRGSYAERLLRCIFFPWACHQAE*ADGAN
Sbjct  429   RRTPHQPSPVPA*CDSR*GQ*RAQASIRFFRLRGSYAERLLRCIFFPWACHQAE*ADGAN  250

Query  249   FDKGKVSDIRPLCQHPA*VRTW*VGEAWRVQVCNRLMVSRWADEFDVRRS*VCHLFPFKK  70
             FDKGKVSDIRPLCQHPA*VRTW*VGEAWRVQVCNRLMVSRWADEFDVRRS*VCHLFPFKK
Sbjct  249   FDKGKVSDIRPLCQHPA*VRTW*VGEAWRVQVCNRLMVSRWADEFDVRRS*VCHLFPFKK  70

Query  69    Y*CNKNQDLV**LDT*FHRAFFE  1
             Y*CNKNQDLV**LDT*FHRAFFE
Sbjct  69    Y*CNKNQDLV**LDT*FHRAFFE  1


 Score = 2005 bits (6057),  Expect = 0.0
 Identities = 982/982 (100%), Positives = 982/982 (100%), Gaps = 0/982 (0%)
 Frame = -2/-2

Query  2948  CRENVLCQMYC*TIIL*VQVCRCC*YCNICVVD*IVI*ACAVFGKIQQQDQHRRKYLVQE  2769
             CRENVLCQMYC*TIIL*VQVCRCC*YCNICVVD*IVI*ACAVFGKIQQQDQHRRKYLVQE
Sbjct  2948  CRENVLCQMYC*TIIL*VQVCRCC*YCNICVVD*IVI*ACAVFGKIQQQDQHRRKYLVQE  2769

Query  2768  NRSTHYNVRYNSQGSVSQTAGGYIELMTNS*IKVACRGSSSRL*ASFFRFTAAGFMTPSS  2589
             NRSTHYNVRYNSQGSVSQTAGGYIELMTNS*IKVACRGSSSRL*ASFFRFTAAGFMTPSS
Sbjct  2768  NRSTHYNVRYNSQGSVSQTAGGYIELMTNS*IKVACRGSSSRL*ASFFRFTAAGFMTPSS  2589

Query  2588  PS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQATSLP*  2409
             PS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQATSLP*
Sbjct  2588  PS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQATSLP*  2409

Query  2408  TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWRASSLRYG*IVVASTA  2229
             TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWRASSLRYG*IVVASTA
Sbjct  2408  TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWRASSLRYG*IVVASTA  2229

Query  2228  SIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QTLFFKSSASCLSIYIG  2049
             SIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QTLFFKSSASCLSIYIG
Sbjct  2228  SIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QTLFFKSSASCLSIYIG  2049

Query  2048  GEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHAGVRSTG*NRGRNSNL  1869
             GEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHAGVRSTG*NRGRNSNL
Sbjct  2048  GEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHAGVRSTG*NRGRNSNL  1869

Query  1868  GSIVM*VG*LRKRQVPGPFKIRRRKLAPIRHSLWSGKPEVVWQQSHQDRCARHGRP*NLD  1689
             GSIVM*VG*LRKRQVPGPFKIRRRKLAPIRHSLWSGKPEVVWQQSHQDRCARHGRP*NLD
Sbjct  1868  GSIVM*VG*LRKRQVPGPFKIRRRKLAPIRHSLWSGKPEVVWQQSHQDRCARHGRP*NLD  1689

Query  1688  QAKILHA*SFMGS*YWVCFFLSCCLALAKGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQT  1509
             QAKILHA*SFMGS*YWVCFFLSCCLALAKGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQT
Sbjct  1688  QAKILHA*SFMGS*YWVCFFLSCCLALAKGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQT  1509

Query  1508  *RLLHSRYFFYFLVKM*SIATIILITNIVYVI*CGNYLCQNDVLIIAIIICVNLFQSGIR  1329
             *RLLHSRYFFYFLVKM*SIATIILITNIVYVI*CGNYLCQNDVLIIAIIICVNLFQSGIR
Sbjct  1508  *RLLHSRYFFYFLVKM*SIATIILITNIVYVI*CGNYLCQNDVLIIAIIICVNLFQSGIR  1329

Query  1328  LSDYRVE*IIPKGNTWFWRTCYRYMPNLH*FSGCKTIISVSEFNKK*ISRANSS*PKKEW  1149
             LSDYRVE*IIPKGNTWFWRTCYRYMPNLH*FSGCKTIISVSEFNKK*ISRANSS*PKKEW
Sbjct  1328  LSDYRVE*IIPKGNTWFWRTCYRYMPNLH*FSGCKTIISVSEFNKK*ISRANSS*PKKEW  1149

Query  1148  WPCTCF*ETL**IASCVALVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKLRFHRP  969
             WPCTCF*ETL**IASCVALVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKLRFHRP
Sbjct  1148  WPCTCF*ETL**IASCVALVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKLRFHRP  969

Query  968   QTTIIGGQNLFPHVGR*ALNLISKNN*KQAGVPSIFAQRGDVEHRQPHPLINKFVDLYLT  789
             QTTIIGGQNLFPHVGR*ALNLISKNN*KQAGVPSIFAQRGDVEHRQPHPLINKFVDLYLT
Sbjct  968   QTTIIGGQNLFPHVGR*ALNLISKNN*KQAGVPSIFAQRGDVEHRQPHPLINKFVDLYLT  789

Query  788   QIFLLFAPIR*ELWIINSLDASSYGYKQPVSYFVNMAEDDLCSLFFKLKVEDVTSSDELA  609
             QIFLLFAPIR*ELWIINSLDASSYGYKQPVSYFVNMAEDDLCSLFFKLKVEDVTSSDELA
Sbjct  788   QIFLLFAPIR*ELWIINSLDASSYGYKQPVSYFVNMAEDDLCSLFFKLKVEDVTSSDELA  609

Query  608   RHMKNASNERKPLIEPGENQSMDIDEEGGSVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQ  429
             RHMKNASNERKPLIEPGENQSMDIDEEGGSVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQ
Sbjct  608   RHMKNASNERKPLIEPGENQSMDIDEEGGSVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQ  429

Query  428   GALLTNLPPYQHDVTLDEVNRGLRQASGFFGYADPMRSAYFAAFSFPGRVIKLNEQMELT  249
             GALLTNLPPYQHDVTLDEVNRGLRQASGFFGYADPMRSAYFAAFSFPGRVIKLNEQMELT
Sbjct  428   GALLTNLPPYQHDVTLDEVNRGLRQASGFFGYADPMRSAYFAAFSFPGRVIKLNEQMELT  249

Query  248   STKGKCLTFDLYASTQLRFEPGELVRHGECKFAIG*WLVDGLTSLMSGEAECVTCFPLRS  69
             STKGKCLTFDLYASTQLRFEPGELVRHGECKFAIG*WLVDGLTSLMSGEAECVTCFPLRS
Sbjct  248   STKGKCLTFDLYASTQLRFEPGELVRHGECKFAIG*WLVDGLTSLMSGEAECVTCFPLRS  69

Query  68    INVIKIKIWFNNWILDFIALFL  3
             INVIKIKIWFNNWILDFIALFL
Sbjct  68    INVIKIKIWFNNWILDFIALFL  3


 Score = 2001 bits (6045),  Expect = 0.0
 Identities = 982/982 (100%), Positives = 982/982 (100%), Gaps = 0/982 (0%)
 Frame = +3/+3

Query  3     QKKRDEIKYPVIKPDLDFYYINTS*RETSDTLSFS*HQTRQPID*PLADCKLALAMPHQL  182
             QKKRDEIKYPVIKPDLDFYYINTS*RETSDTLSFS*HQTRQPID*PLADCKLALAMPHQL
Sbjct  3     QKKRDEIKYPVIKPDLDFYYINTS*RETSDTLSFS*HQTRQPID*PLADCKLALAMPHQL  182

Query  183   TRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGAPHRIRVTEKT*CLPE  362
             TRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGAPHRIRVTEKT*CLPE
Sbjct  183   TRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGAPHRIRVTEKT*CLPE  362

Query  363   PSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVEVQQPVAHRPSFFVNI  542
             PSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVEVQQPVAHRPSFFVNI
Sbjct  363   PSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVEVQQPVAHRPSFFVNI  542

Query  543   HRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVFSHVNKVGNRLLVPIT  722
             HRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVFSHVNKVGNRLLVPIT
Sbjct  543   HRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVFSHVNKVGNRLLVPIT  722

Query  723   RSIQTIYNPELLAYWSK**KYLS*V*VHKFIN*WMRLSMLHVASLCEYRRDTCLLLIVFT  902
             RSIQTIYNPELLAYWSK**KYLS*V*VHKFIN*WMRLSMLHVASLCEYRRDTCLLLIVFT
Sbjct  723   RSIQTIYNPELLAYWSK**KYLS*V*VHKFIN*WMRLSMLHVASLCEYRRDTCLLLIVFT  902

Query  903   Y*V*SSATHVRE*VLSSNNGGLWSMESQLLLFPLIMGRTRLPLFMLRKGATLSS*TPR*A  1082
             Y*V*SSATHVRE*VLSSNNGGLWSMESQLLLFPLIMGRTRLPLFMLRKGATLSS*TPR*A
Sbjct  903   Y*V*SSATHVRE*VLSSNNGGLWSMESQLLLFPLIMGRTRLPLFMLRKGATLSS*TPR*A  1082

Query  1083  CRHQSNTAGNLL*GLLKARTWPPFLLRLTAIRPAYLFFIKLRNRDNSFAPTKLV*IWHIS  1262
             CRHQSNTAGNLL*GLLKARTWPPFLLRLTAIRPAYLFFIKLRNRDNSFAPTKLV*IWHIS
Sbjct  1083  CRHQSNTAGNLL*GLLKARTWPPFLLRLTAIRPAYLFFIKLRNRDNSFAPTKLV*IWHIS  1262

Query  1263  IAGSPKPCISFWNNLFNTIIA*TYSRLKKINTYYYCYY*YIILA*IISALYYIYNVSN*Y  1442
             IAGSPKPCISFWNNLFNTIIA*TYSRLKKINTYYYCYY*YIILA*IISALYYIYNVSN*Y
Sbjct  1263  IAGSPKPCISFWNNLFNTIIA*TYSRLKKINTYYYCYY*YIILA*IISALYYIYNVSN*Y  1442

Query  1443  DCGNTLHLNQKIEKVS*MQQSSRLPMRFREIQ*RANFKLYPTPPNYGHPFLTSFR*GQTT  1622
             DCGNTLHLNQKIEKVS*MQQSSRLPMRFREIQ*RANFKLYPTPPNYGHPFLTSFR*GQTT
Sbjct  1443  DCGNTLHLNQKIEKVS*MQQSSRLPMRFREIQ*RANFKLYPTPPNYGHPFLTSFR*GQTT  1622

Query  1623  RQEKANPVL*THERSRMQYFRLIQILRPPVSCASILM*LLPNYLWLSRPETVSDWRQFPT  1802
             RQEKANPVL*THERSRMQYFRLIQILRPPVSCASILM*LLPNYLWLSRPETVSDWRQFPT
Sbjct  1623  RQEKANPVL*THERSRMQYFRLIQILRPPVSCASILM*LLPNYLWLSRPETVSDWRQFPT  1802

Query  1803  PYFKWPWHLPFS*LSNSHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*  1982
             PYFKWPWHLPFS*LSNSHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*
Sbjct  1803  PYFKWPWHLPFS*LSNSHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*  1982

Query  1983  QTPPAFPETMGSCSARFEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCI  2162
             QTPPAFPETMGSCSARFEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCI
Sbjct  1983  QTPPAFPETMGSCSARFEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCI  2162

Query  2163  CLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FR  2342
             CLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FR
Sbjct  2163  CLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FR  2342

Query  2343  MLHRHFRKFLVHSLAGVKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDI  2522
             MLHRHFRKFLVHSLAGVKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDI
Sbjct  2343  MLHRHFRKFLVHSLAGVKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDI  2522

Query  2523  TSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLKPT*TPPAGNLYL*VCHKFYV  2702
             TSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLKPT*TPPAGNLYL*VCHKFYV
Sbjct  2523  TSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLKPT*TPPAGNLYL*VCHKFYV  2702

Query  2703  PSRSL*HRTLGVVAYVVMC*PIFLY*IFSSVLILLLNFAKNSTCSYDYLIYYTYIAVSTT  2882
             PSRSL*HRTLGVVAYVVMC*PIFLY*IFSSVLILLLNFAKNSTCSYDYLIYYTYIAVSTT
Sbjct  2703  PSRSL*HRTLGVVAYVVMC*PIFLY*IFSSVLILLLNFAKNSTCSYDYLIYYTYIAVSTT  2882

Query  2883  TTHLDL*YYSSTVHLT*NIFTT  2948
             TTHLDL*YYSSTVHLT*NIFTT
Sbjct  2883  TTHLDL*YYSSTVHLT*NIFTT  2948


 Score = 1983 bits (5991),  Expect = 0.0
 Identities = 982/982 (100%), Positives = 982/982 (100%), Gaps = 0/982 (0%)
 Frame = +2/+2

Query  2     SKKAR*NQVSSY*TRS*FLLH*YFLKGNK*HTQLLLTSNSSAHRLTISRLQTCTRHASPT  181
             SKKAR*NQVSSY*TRS*FLLH*YFLKGNK*HTQLLLTSNSSAHRLTISRLQTCTRHASPT
Sbjct  2     SKKAR*NQVSSY*TRS*FLLH*YFLKGNK*HTQLLLTSNSSAHRLTISRLQTCTRHASPT  181

Query  182   HQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKNLMLA*  361
             HQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKNLMLA*
Sbjct  182   HQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKNLMLA*  361

Query  362   ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQY  541
             ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQY
Sbjct  362   ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQY  541

Query  542   PSIDSHPARSRVYAHLRRSSCV*LAHRCLSHPPL*A*KRENTGRLQPC*QSRKQVACTHN  721
             PSIDSHPARSRVYAHLRRSSCV*LAHRCLSHPPL*A*KRENTGRLQPC*QSRKQVACTHN
Sbjct  542   PSIDSHPARSRVYAHLRRSSCV*LAHRCLSHPPL*A*KRENTGRLQPC*QSRKQVACTHN  721

Query  722   SKHPNYL*SRALSVLEQIIKIFELGIGPQIY*LMDAAVDAPRRLVVRI*KGHLPAFNCFY  901
             SKHPNYL*SRALSVLEQIIKIFELGIGPQIY*LMDAAVDAPRRLVVRI*KGHLPAFNCFY
Sbjct  722   SKHPNYL*SRALSVLEQIIKIFELGIGPQIY*LMDAAVDAPRRLVVRI*KGHLPAFNCFY  901

Query  902   LLGLKLSDPREGIGSVLQ*WWFVVYGISAFAFSFNNGTHPPTFIYAAERRYFVKLNPTLG  1081
             LLGLKLSDPREGIGSVLQ*WWFVVYGISAFAFSFNNGTHPPTFIYAAERRYFVKLNPTLG
Sbjct  902   LLGLKLSDPREGIGSVLQ*WWFVVYGISAFAFSFNNGTHPPTFIYAAERRYFVKLNPTLG  1081

Query  1082  LSAPKQHSWQFIIGSLKSTYMATIPS*ANCYSPCLFIFY*TQKQR**FCTH*TSVNLAYI  1261
             LSAPKQHSWQFIIGSLKSTYMATIPS*ANCYSPCLFIFY*TQKQR**FCTH*TSVNLAYI
Sbjct  1082  LSAPKQHSWQFIIGSLKSTYMATIPS*ANCYSPCLFIFY*TQKQR**FCTH*TSVNLAYI  1261

Query  1262  YSRFSKTMYFLLE*FIQHDNRLNVFPIEKD*HILLLLLLIHHFGIDNFRTILHIQC**LI  1441
             YSRFSKTMYFLLE*FIQHDNRLNVFPIEKD*HILLLLLLIHHFGIDNFRTILHIQC**LI
Sbjct  1262  YSRFSKTMYFLLE*FIQHDNRLNVFPIEKD*HILLLLLLIHHFGIDNFRTILHIQC**LI  1441

Query  1442  *LWQYFTS*PENRKSILNAAIFTFANALSRNPIAGQL*ALPHSSQLWASFFDILSLRPNN  1621
             *LWQYFTS*PENRKSILNAAIFTFANALSRNPIAGQL*ALPHSSQLWASFFDILSLRPNN
Sbjct  1442  *LWQYFTS*PENRKSILNAAIFTFANALSRNPIAGQL*ALPHSSQLWASFFDILSLRPNN  1621

Query  1622  TTRKSKPSTMNP*TITHAVFSLDPDFKASRVLRIDLDVIVAKLPLAFPTRDCV*LAPVSD  1801
             TTRKSKPSTMNP*TITHAVFSLDPDFKASRVLRIDLDVIVAKLPLAFPTRDCV*LAPVSD
Sbjct  1622  TTRKSKPSTMNP*TITHAVFSLDPDFKASRVLRIDLDVIVAKLPLAFPTRDCV*LAPVSD  1801

Query  1802  AVF*MALALAFFVTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTI  1981
             AVF*MALALAFFVTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTI
Sbjct  1802  AVF*MALALAFFVTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTI  1981

Query  1982  ANPSCISRNDGLLQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMY  2161
             ANPSCISRNDGLLQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMY
Sbjct  1982  ANPSCISRNDGLLQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMY  2161

Query  2162  LSIFLARRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*  2341
             LSIFLARRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*
Sbjct  2162  LSIFLARRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*  2341

Query  2342  NASSPFSQVPCSFTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGY  2521
             NASSPFSQVPCSFTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGY
Sbjct  2342  NASSPFSQVPCSFTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGY  2521

Query  2522  HVRPPPHRSQT*PCDSRGLIRKARRAS*SLLQ*T*RKKPKADLNSPCRQPLSMSLS*VLC  2701
             HVRPPPHRSQT*PCDSRGLIRKARRAS*SLLQ*T*RKKPKADLNSPCRQPLSMSLS*VLC
Sbjct  2522  HVRPPPHRSQT*PCDSRGLIRKARRAS*SLLQ*T*RKKPKADLNSPCRQPLSMSLS*VLC  2701

Query  2702  TLPQSVTQNLGSCSVRCNVLTYFLVLNIFFCVDPAAEFCQKQHMLI*LSNLLHIYCSINN  2881
             TLPQSVTQNLGSCSVRCNVLTYFLVLNIFFCVDPAAEFCQKQHMLI*LSNLLHIYCSINN
Sbjct  2702  TLPQSVTQNLGSCSVRCNVLTYFLVLNIFFCVDPAAEFCQKQHMLI*LSNLLHIYCSINN  2881

Query  2882  NDTPGLIIL*FNSTFDIKHFHD  2947
             NDTPGLIIL*FNSTFDIKHFHD
Sbjct  2882  NDTPGLIIL*FNSTFDIKHFHD  2947


 Score = 1958 bits (5916),  Expect = 0.0
 Identities = 982/982 (100%), Positives = 982/982 (100%), Gaps = 0/982 (0%)
 Frame = -3/-3

Query  2947  VVKMFYVKCTVEL*YYKSRCVVVVDTAIYV**IR*SYEHVLFLAKFSSRINTEENI*YKK  2768
             VVKMFYVKCTVEL*YYKSRCVVVVDTAIYV**IR*SYEHVLFLAKFSSRINTEENI*YKK
Sbjct  2947  VVKMFYVKCTVEL*YYKSRCVVVVDTAIYV**IR*SYEHVLFLAKFSSRINTEENI*YKK  2768

Query  2767  IGQHITTYATTPKVLCHRLREGT*NL*QTHR*RLPAGGVQVGFRLLSSGLLQQAS*RPPR  2588
             IGQHITTYATTPKVLCHRLREGT*NL*QTHR*RLPAGGVQVGFRLLSSGLLQQAS*RPPR
Sbjct  2767  IGQHITTYATTPKVLCHRLREGT*NL*QTHR*RLPAGGVQVGFRLLSSGLLQQAS*RPPR  2588

Query  2587  LPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGGFQSLAAERRCKLPLSRK  2408
             LPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGGFQSLAAERRCKLPLSRK
Sbjct  2587  LPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGGFQSLAAERRCKLPLSRK  2408

Query  2407  RWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDMVESLSPARP  2228
             RWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDMVESLSPARP
Sbjct  2407  RWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDMVESLSPARP  2228

Query  2227  PFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDSRLCSSRAQLVV*VYISV  2048
             PFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDSRLCSSRAQLVV*VYISV
Sbjct  2227  PFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDSRLCSSRAQLVV*VYISV  2048

Query  2047  ESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGSMLE*DLLVEIVEGIAIW  1868
             ESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGSMLE*DLLVEIVEGIAIW
Sbjct  2047  ESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGSMLE*DLLVEIVEGIAIW  1868

Query  1867  DPL*CELDSYEKGKCQGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKIDAQDTGGLKIWI  1688
             DPL*CELDSYEKGKCQGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKIDAQDTGGLKIWI
Sbjct  1867  DPL*CELDSYEKGKCQGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKIDAQDTGGLKIWI  1688

Query  1687  KRKYCMRDRSWVHSTGFAFSCRVVWP*RKDVKKGCP*LGGVG*SLKLARYWISRKRIGKR  1508
             KRKYCMRDRSWVHSTGFAFSCRVVWP*RKDVKKGCP*LGGVG*SLKLARYWISRKRIGKR
Sbjct  1687  KRKYCMRDRSWVHSTGFAFSCRVVWP*RKDVKKGCP*LGGVG*SLKLARYWISRKRIGKR  1508

Query  1507  EDCCIQDTFSIFWLRCKVLPQSY*LLTLYM*YSAEIIYAKMMY***Q**YVLIFFNREYV  1328
             EDCCIQDTFSIFWLRCKVLPQSY*LLTLYM*YSAEIIYAKMMY***Q**YVLIFFNREYV
Sbjct  1507  EDCCIQDTFSIFWLRCKVLPQSY*LLTLYM*YSAEIIYAKMMY***Q**YVLIFFNREYV  1328

Query  1327  *AIIVLNKLFQKEIHGFGEPAIDICQIYTSLVGAKLLSLFLSLIKNK*AGRIAVSLRRNG  1148
             *AIIVLNKLFQKEIHGFGEPAIDICQIYTSLVGAKLLSLFLSLIKNK*AGRIAVSLRRNG
Sbjct  1327  *AIIVLNKLFQKEIHGFGEPAIDICQIYTSLVGAKLLSLFLSLIKNK*AGRIAVSLRRNG  1148

Query  1147  GHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSKS*DSIDH  968
             GHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSKS*DSIDH
Sbjct  1147  GHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSKS*DSIDH  968

Query  967   KPPLLEDRTYSLTWVAEL*T**VKTIKSRQVSLLYSHNEATWSIDSRIH*LINLWTYT*L  788
             KPPLLEDRTYSLTWVAEL*T**VKTIKSRQVSLLYSHNEATWSIDSRIH*LINLWTYT*L
Sbjct  967   KPPLLEDRTYSLTWVAEL*T**VKTIKSRQVSLLYSHNEATWSIDSRIH*LINLWTYT*L  788

Query  787   KYFYYLLQYAKSSGL*IVWMLRVMGTSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*L  608
             KYFYYLLQYAKSSGL*IVWMLRVMGTSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*L
Sbjct  787   KYFYYLLQYAKSSGL*IVWMLRVMGTSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*L  608

Query  607   DT*RTPQMSVNP*SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCK  428
             DT*RTPQMSVNP*SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCK
Sbjct  607   DT*RTPQMSVNP*SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCK  428

Query  427   AHSSPTFPRTSMM*LSMRSIEGSGKHQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*L  248
             AHSSPTFPRTSMM*LSMRSIEGSGKHQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*L
Sbjct  427   AHSSPTFPRTSMM*LSMRSIEGSGKHQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*L  248

Query  247   RQRESV*HSTSMPAPSLGSNLVSW*GMASASLQSANG*SMG*RV*CQEKLSVSLVSL*EV  68
             RQRESV*HSTSMPAPSLGSNLVSW*GMASASLQSANG*SMG*RV*CQEKLSVSLVSL*EV
Sbjct  247   RQRESV*HSTSMPAPSLGSNLVSW*GMASASLQSANG*SMG*RV*CQEKLSVSLVSL*EV  68

Query  67    LM**KSRSGLITGYLISSRFF*  2
             LM**KSRSGLITGYLISSRFF*
Sbjct  67    LM**KSRSGLITGYLISSRFF*  2


>gi|468518|emb|X64255.1|ARROLDNA  A.rhizogenes genes rolA, rolB, rolC, rolD
Length=7427

 Score =  433 bits (1301),  Expect = 0.0
 Identities = 203/261 (77%), Positives = 228/261 (87%), Gaps = 0/261 (0%)
 Frame = +1/-3

Query  1852  HITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLD  2031
             HITM P+ LFL RFQP DLT AW+Q+NLF+ I+FAF IYS+ YSK L+ FQKRWA  VLD
Sbjct  3405  HITMAPRSLFLQRFQPRDLTKAWNQLNLFDEIQFAFLIYSQVYSKTLMDFQKRWAQGVLD  3226

Query  2032  LKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQS  2211
             L+EN+PP+ ILKQLA LLKNKVCYHPPM V  PDLAREND+HVFVYLSREKMQKVL+E+S
Sbjct  3225  LEENAPPVVILKQLAHLLKNKVCYHPPMLVDHPDLARENDRHVFVYLSREKMQKVLEEKS  3046

Query  2212  ITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLE  2391
             ITFG+EAVLATT+QPYRS+L LQEM+R HN+AWPH R EEPDLE FIAIFAS+LFIHLLE
Sbjct  3045  ITFGLEAVLATTMQPYRSDLVLQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLE  2866

Query  2392  LKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPEPDLTLRLS  2571
             LKVTNVYGREVACTFF+R+GT NR YDV+ACG TQFTKNA  + RPA  SPEPDLTLRLS
Sbjct  2865  LKVTNVYGREVACTFFVRQGTGNRSYDVIACGITQFTKNAGVMPRPAVPSPEPDLTLRLS  2686

Query  2572  GPDQEGEEGVMKPAAVNLKKE  2634
             GP+Q+ EEG MKPA VNLKKE
Sbjct  2685  GPNQKREEGDMKPAIVNLKKE  2623


 Score =  335 bits (1006),  Expect = 0.0
 Identities = 185/261 (70%), Positives = 202/261 (77%), Gaps = 0/261 (0%)
 Frame = -2/+2

Query  2633  SFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFS  2454
             SFFRFT AGF++PSS    GPESRRVRSGSG+  AGR I  AFLVNCV+PQA TS* RF 
Sbjct  2624  SFFRFTIAGFISPSSRFWLGPESRRVRSGSGDGTAGRGITPAFLVNCVMPQAMTS*ERFP  2803

Query  2453  VPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWR  2274
             VP R KKVQATSLP T VTFNSS+*MNK LAKMA+K S+SGSS R CGQA L* R+ISWR
Sbjct  2804  VPCRTKKVQATSLPYTFVTFNSSR*MNKVLAKMAIKPSRSGSSTRRCGQAML*ARTISWR  2983

Query  2273  ASSLRYG*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QT  2094
               SLR G IVVASTAS PNVMD S STFCIFSR+R*TNTC SFS ARSG* T++GG** T
Sbjct  2984  TRSLR*GCIVVASTASNPNVMDFSSSTFCIFSRDR*TNTCRSFSLARSG*STSMGG**HT  3163

Query  2093  LFFKSSASCLSIYIGGEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHA  1914
             LFF+  ASCLS+  GG FS KSST  AH FWK  R LL*+ L*I KAN I SN+  W  A
Sbjct  3164  LFFRRWASCLSMTTGGAFSSKSSTPWAHLFWKSMRVLL*TWL*IKKANWISSNKLSWFQA  3343

Query  1913  GVRSTG*NRGRNSNLGSIVM*  1851
              VRS G* R RNS+ G+IVM*
Sbjct  3344  FVRSRG*KR*RNSDRGAIVM*  3406


 Score =  318 bits (953),  Expect = 8e-155
 Identities = 165/269 (61%), Positives = 192/269 (71%), Gaps = 0/269 (0%)
 Frame = +3/-2

Query  1851  SHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*QTPPAFPETMGSCSAR  2030
             SHHNGS I IPST+ST+RSH S+EP   +R DPICF NL*P L*Q    FPE +G   A 
Sbjct  3406  SHHNGSSITIPSTLSTTRSHKSLEPA*LVR*DPICFFNL*PSL*QNSHGFPEKVGPRRA*  3227

Query  2031  FEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCICLSFSREDAESAEGTI  2210
             F GK S   +T*TT  + E+QS+LS S+ C S GS  RKRPTCICLS SREDAES  G I
Sbjct  3226  FGGKRSAGGHT*TTGPSPEKQSMLSPSHACRSPGSCQRKRPTCICLSISREDAESTGGKI  3047

Query  2211  HYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FRMLHRHFRKFLVHSLAG  2390
             H++W GGRAGD+D+T+S R RPPGD PCSQ CLAA P G T*   L+RHF K+LVHS AG
Sbjct  3046  HHVWIGGRAGDHDATLS*RPRPPGDGPCSQHCLAAPPRGRT*SGRLYRHFCKYLVHSPAG  2867

Query  2391  VKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATL  2570
             VKSD+ +R+ GSLHLL AAR  KP L*   LRHHT+HQKC RD T+G  +TGARP+PA L
Sbjct  2866  VKSDKCVRQGGSLHLLRAARHWKPLL*RHCLRHHTVHQKCWRDATTGGTVTGARPHPAAL  2687

Query  2571  GA*SGRRGGRHEACCSKPEERSLKPT*TP  2657
             G       G +EAC SK EER+L    +P
Sbjct  2686  GTQPET*RG*YEACYSKSEERNLGDLRSP  2600


 Score =  314 bits (940),  Expect = 7e-148
 Identities = 163/267 (61%), Positives = 191/267 (71%), Gaps = 0/267 (0%)
 Frame = -1/+1

Query  2637  GFFLQVYCSRLHDALLAFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAV  2458
             GFFLQ+Y SRLH  L  FL+  RE QG VWLR*   R+ +   IFGELC AAS ++IGAV
Sbjct  2620  GFFLQIYYSRLHITLFTFLVGSREPQGEVWLR*RYRRSWHHASIFGELCDAASNDVIGAV  2799

Query  2457  FSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLL  2278
              S  P +EGA YL  V++ HF*LQQVNEQGTC+NGD+AF IRF  AAVRPS VV+T+HLL
Sbjct  2800  SSALPHEEGAGYLPAVHICHF*LQQVNEQGTCKNGDKAFQIRFFHAAVRPSNVVSTDHLL  2979

Query  2277  EGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIA  2098
             E E+A I L+R RQHGL SK +G FLQ+FLHLLAR IDKYM VVFS +IR+ +KH R+I 
Sbjct  2980  EDEVATIGLHRGRQHGLQSKRDGFFLQYFLHLLAR*IDKYMSVVFSGKIRVIDKHGRVIT  3159

Query  2097  DFVLQELS*LFKYIYRWRVFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAP  1918
              FV QE+  LFKY +R  VFLQI H   P FLE+ E FAI  AID KSK D +E V L P
Sbjct  3160  YFVFQEMGQLFKYDHRRSVFLQIKHALGPPFLEIHESFAIDLAID*KSKLDLIEQVKLVP  3339

Query  1917  CWSEIYWLKSWKE*QFGIHCDVSWIVT  1837
              + EI WLK+ KE*    HCDV   +T
Sbjct  3340  GFCEISWLKALKE**SRSHCDVRLGIT  3420


 Score =  297 bits (890),  Expect = 5e-135
 Identities = 162/264 (61%), Positives = 173/264 (65%), Gaps = 0/264 (0%)
 Frame = -3/+3

Query  2638  RLLSSGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGG  2459
             R LSS LL QAS  P  +    PR AG GLAPV   P V SR HFW* V CRK   HR G
Sbjct  2619  RFLSSDLL*QASYHPLHVSGWVPRAAG*GLAPVTVPPVVASRQHFW*TV*CRKQ*RHRSG  2798

Query  2458  FQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASP  2279
             FQ LAA RRC+LP  R   SLLTPA E*TR L+KWR*S+ +QV P G AAKQ CEHG SP
Sbjct  2799  FQCLAARRRCRLPPCRTHLSLLTPAGE*TRYLQKWR*SLPDQVLPRGGAAKQCCEHGPSP  2978

Query  2278  GGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDS  2099
             GGR R D V S SPARPP Q *WI P  LSASSRE DRQIHVGRFL  DP D Q  E D+
Sbjct  2979  GGRGRYDRVASWSPARPPIQT*WIFPPVLSASSREIDRQIHVGRFLWQDPGDRQAWEGDN  3158

Query  2098  RLCSSRAQLVV*VYISVESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGS  1919
              LC S    VV*V    E FP N A   P  SGN    CY  GYRL+KQIGS R   +GS
Sbjct  3159  ILCFSGDGPVV*V*PPAERFPPNQARLGPTFSGNP*EFCYRLGYRLKKQIGSHRTS*AGS  3338

Query  1918  MLE*DLLVEIVEGIAIWDPL*CEL  1847
              L *DL+VE VEGI I +PL*CE+
Sbjct  3339  RLL*DLVVESVEGIVIEEPL*CEV  3410


 Score =  296 bits (888),  Expect = 0.0
 Identities = 140/188 (74%), Positives = 154/188 (81%), Gaps = 0/188 (0%)
 Frame = -2/+3

Query  701   VSYFVNMAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGG  522
             +SYF NMAE DLC+LF  LKV DV+SSDEL +H+++AS ER PL EPGE QSMDIDEEGG
Sbjct  4539  ISYFANMAEFDLCALFSSLKVGDVSSSDELKKHIQSASKERTPLTEPGEGQSMDIDEEGG  4718

Query  521   SVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGF  342
                 G+LYLYVDCPTMM CFYGGSLPYN   GAL+TNLPPYQ DV+L EV RGLRQASGF
Sbjct  4719  RQDPGILYLYVDCPTMMRCFYGGSLPYNSRHGALITNLPPYQKDVSLGEVCRGLRQASGF  4898

Query  341   FGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGE  162
             FGY D +RSAYFAA S PG  +KL+ QMELTSTKGK LTFDLYAS QLR EPG LVRHGE
Sbjct  4899  FGYEDVIRSAYFAALSVPGYFVKLDGQMELTSTKGKSLTFDLYASNQLRLEPGALVRHGE  5078

Query  161   CKFAIG*W  138
             CKF + *W
Sbjct  5079  CKFGME*W  5102


 Score =  278 bits (833),  Expect = 6e-137
 Identities = 159/268 (59%), Positives = 180/268 (67%), Gaps = 0/268 (0%)
 Frame = +2/-1

Query  1838  VTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTIANPSCISRNDGL  2017
             V   LTSQW+ + YSF+ FN  IS + G   T S  S+LL  SIA +IA  S ISR  G 
Sbjct  3419  VIPNLTSQWLLDHYSFNAFNHEISQKPGTSLTCSMRSNLLF*SIAKSIAKLSWISRKGGP  3240

Query  2018  LQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMYLSIFLARRCRKC  2197
               C I RKTL R+ YLNN   S*+TK  I L CL ++RI  EKTT+MYLSI+LARRCRK 
Sbjct  3239  KACLIWRKTLRRWSYLNNWPIS*KTKYVITLPCLSITRILPEKTTDMYLSIYLARRCRKY  3060

Query  2198  *RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*NASSPFSQVPCS  2377
              R NP  L+WRPCWR R N I A+S SRR SV TTLLGRTAA +NLI  A SPF QVPCS
Sbjct  3059  WRKNPSRLDWRPCWRPRCNPIVATSSSRRWSVLTTLLGRTAAWKNLIWKALSPFLQVPCS  2880

Query  2378  FTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*  2557
             FTCWS*K*   T  R* APS CG+ L+TAPM   LAA H+SPKM +  H R   HRSQT 
Sbjct  2879  FTCWS*K*QMCTAGR*PAPSSCGKALETAPMTSLLAASHSSPKMLA*CHDRRYRHRSQTS  2700

Query  2558  PCDSRGLIRKARRAS*SLLQ*T*RKKPK  2641
             PC SR   R  +R  *SLL * *RKKP+
Sbjct  2699  PCGSRDPTRNVKRVI*SLL**I*RKKPR  2616


 Score =  265 bits (792),  Expect = 0.0
 Identities = 138/190 (72%), Positives = 152/190 (80%), Gaps = 0/190 (0%)
 Frame = +1/-2

Query  130   STNH*PIANLHSPCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK  309
             S  H  I NLHSPCLTN+PGS+LSW+LA*RS VR FPFVEVSSIC  SL   PG E+AAK
Sbjct  5110  SYCHYSIPNLHSPCLTNAPGSSLSWLLA*RSKVRDFPFVEVSSICPSSLTKYPGTESAAK  4931

Query  310   *ALRIGSA*PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQS  489
             *ALRI S+ PK PDACLSPL TS R+TS WYGGRLV SAPC++L*GKDPP*K  IIVGQS
Sbjct  4930  *ALRITSSYPKNPDACLSPLHTSPRLTSFWYGGRLVMSAPCLEL*GKDPP*KHRIIVGQS  4751

Query  490   T*RYSSPWPTDPPSSSISID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHR  669
             T*RYS P    PPSSSISID  SPGS++G+RSFEA +MC  SSSL  TS TL L+KR HR
Sbjct  4750  T*RYSIPGSWRPPSSSISIDWPSPGSVRGVRSFEALWMCFFSSSLDDTSPTLRLEKRAHR  4571

Query  670   SSSAMLTK*E  699
             S+SAML K*E
Sbjct  4570  SNSAMLAK*E  4541


 Score =  217 bits (649),  Expect = 8e-155
 Identities = 112/188 (59%), Positives = 134/188 (71%), Gaps = 0/188 (0%)
 Frame = +3/-1

Query  138   PLADCKLALAMPHQLTRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGA  317
             PL   K A AMPHQ TRFEP+L AGI+VE Q LSLC S*LHL IQLD+ P +RKC EVGA
Sbjct  5102  PLLHSKFAFAMPHQRTRFEPELVAGIKVEGQRLSLC*S*LHLPIQLDEVPGDRKCGEVGA  4923

Query  318   PHRIRVTEKT*CLPEPSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVE  497
             P  I V++++*CLP+P   L E++I LVR K+G+E A+  IV Q PSI+A HHRRAVDVE
Sbjct  4922  PDNILVSKES*CLPKPPAHLTETYIFLVRWKIGDERAVPGIVGQRPSIKASHHRRAVDVE  4743

Query  498   VQQPVAHRPSFFVNIHRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVF  677
             VQ P     + FVNIHRL LTRL QG  L+*G L V  *LIA  ++ + +  KE T V F
Sbjct  4742  VQYPRVLATALFVNIHRLALTRLRQGGPLL*GALDVFL*LIAGRYVAYLKTGKEST*VKF  4563

Query  678   SHVNKVGN  701
              HV+KVGN
Sbjct  4562  RHVSKVGN  4539


 Score =  211 bits (631),  Expect = 7e-148
 Identities = 114/187 (60%), Positives = 124/187 (66%), Gaps = 0/187 (0%)
 Frame = -1/+2

Query  699   FLLC*HG*RRPVFSLFQAQSGGCDKQR*AS*THEERLK*A*TLDRAG*ESIDGY*RRRRV  520
             FLLC*HG   P+ SLFQ+       QR*A  TH ERLK A   D AG*  +DGY*RR R 
Sbjct  4541  FLLC*HGGI*PMCSLFQS*GRRRIVQR*AKETHPERLKGADPPDGAG*GPVDGY*RRGRS  4720

Query  519   GGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA*CDSR*GQ*RAQASIRFF  340
               P   VPLRRLPDDDA+LLWRV ALQ  ARR  HQ S VP  C SR*G   A A IR  
Sbjct  4721  PRPWDTVPLRRLPDDDAMLLWRVFALQFQARRAHHQSSTVPERCKSR*GVQGA*AGIRIL  4900

Query  339   RLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA*VRTW*VGEAWRV  160
              +RG Y ERLLR  F P    QA  ADGANF+KGKVSD+RPLCQ PA  RTW VGEAWR+
Sbjct  4901  WIRGCYPERLLRRTFCPRVLRQAGWADGANFNKGKVSDLRPLCQQPAQARTWCVGEAWRM  5080

Query  159   QVCNRLM  139
             Q+ N +M
Sbjct  5081  QIWNGVM  5101


 Score =  201 bits (599),  Expect = 5e-135
 Identities = 116/192 (60%), Positives = 131/192 (68%), Gaps = 0/192 (0%)
 Frame = -3/+1

Query  712   TSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*LDT*RTPQMSVNP*SSRVRINRWILT  533
             T  LFPTLLTW   T VLSF   +    + AMS* +T R PQ S  P* SRVR +RWILT
Sbjct  4528  TPLLFPTLLTWRNLTYVLSFPVLR*ATYRPAMS*RNTSRAPQRSGPP*RSRVRASRWILT  4707

Query  532   KKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGK  353
             K+      G CTSTSTARR*C A MEG C TI   A SSP F RT  M*+S+R   G G+
Sbjct  4708  KRAVAKTLGYCTSTSTARR*CDAFMEGLCPTIPGTARSSPIFHRTRKM*VSVRCAGGLGR  4887

Query  352   HQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPSLGSNLVSW*  173
             HQ    TR+L GAPTS HFLS G SSS M RWS*L+QRES+* ST MPA S GSNLV W*
Sbjct  4888  HQDSLDTRMLSGAPTSPHFLSPGTSSSWMGRWS*LQQRESL*PSTFMPATSSGSNLVRW*  5067

Query  172   GMASASLQSANG  137
             GMA+A+L+ +NG
Sbjct  5068  GMANANLEWSNG  5103


 Score =  200 bits (595),  Expect = 6e-137
 Identities = 101/161 (62%), Positives = 117/161 (72%), Gaps = 0/161 (0%)
 Frame = +2/-3

Query  140   ISRLQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRS  319
             I+  Q C RHASPTHQVR *AGCWH+GR S+TFPL KLAPSAH A*   +G+K++RSRRS
Sbjct  5100  ITPFQICIRHASPTHQVRA*AGCWHKGRRSETFPLLKLAPSAHPA*RSTRGQKVRRSRRS  4921

Query  320   A*DPRNRKNLMLA*ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRG  499
              * PR ++ LM A*A   PHR+ H +GT E W*  R A NC+A+TLH+S ASSSGSRRRG
Sbjct  4920  G*HPRIQRILMPA*APCTPHRDLHLSGTVEDW**ARRAWNCRAKTLHKSIASSSGSRRRG  4741

Query  500   TAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
             T ++G     LRQYPS   HPA S   A LRRS CV LAHR
Sbjct  4740  TVSQGLGDRPLRQYPSTGPHPAPSGGSAPLRRSGCVSLAHR  4618


 Score = 57.0 bits (162),  Expect = 0.0
 Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 0/39 (0%)
 Frame = -3/+3

Query  1105  AVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSK  989
             A  +WCRQA*RG  ++KV PFR+INKGRRVRP +K K +
Sbjct  4155  ATPVWCRQA*RGAQVEKVVPFRNINKGRRVRP*LKEKER  4271


 Score = 52.3 bits (148),  Expect = 0.0
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
 Frame = +3/-2

Query  990   LLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSNTA  1106
             L F    GRTRLPLFMLRKG T S+  PR*AC H +  A
Sbjct  4270  LSFSFNYGRTRLPLFMLRKGTTFSTCAPR*ACLHHTGVA  4154


 Score = 49.4 bits (139),  Expect = 0.0
 Identities = 19/26 (73%), Positives = 23/26 (88%), Gaps = 0/26 (0%)
 Frame = -2/+3

Query  1817  PFKIRRRKLAPIRHSLWSGKPEVVWQ  1740
             PFK+ RR++APIRHSL SGKPE +WQ
Sbjct  3444  PFKVHRRQVAPIRHSLRSGKPEAIWQ  3521


 Score = 48.4 bits (136),  Expect = 0.0
 Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +3/-1

Query  1734  *LLPNYLWLSRPETVSDWRQFPTPYFKW  1817
             *LLP+ LWLSRPETV DW   P  +FKW
Sbjct  3527  *LLPDCLWLSRPETVPDWCHLPAVHFKW  3444


 Score = 47.7 bits (134),  Expect = 8e-155
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 0/41 (0%)
 Frame = +2/-3

Query  1715  LRIDLDVIVAKLPLAFPTRDCV*LAPVSDAVF*MALALAFF  1837
             +  D  VI+A+LPLAFPT DC *L P++    *MAL L  F
Sbjct  3546  IDFDAMVIIARLPLAFPTGDCA*LVPLAGGAL*MALNLPLF  3424


 Score = 46.7 bits (131),  Expect = 6e-137
 Identities = 20/28 (71%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
 Frame = +1/-2

Query  1735  DCCQTTSGFPDQRLCLIGASFRRRILNG  1818
             D CQ  SGFPD+RLCLIGA+ RR  LNG
Sbjct  3526  DYCQIASGFPDRRLCLIGATCRRCTLNG  3443


 Score = 45.7 bits (128),  Expect = 7e-148
 Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
 Frame = -3/+1

Query  1843  SYEKGKCQGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKI  1724
             + E  + Q HLK   G W QS TVSGRESQR  GNNH +I
Sbjct  3418  TME*RQVQCHLKCTAGKWHQSGTVSGRESQRQSGNNHHRI  3537


 Score = 42.1 bits (117),  Expect = 8e-155
 Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
 Frame = +2/-1

Query  1013  THPPTFIYAAERRYFVKLNPTLGLSAP  1093
             +H PTFIY A+R YF  L  TLGLSAP
Sbjct  4247  SHAPTFIYVAKRHYFFNLCTTLGLSAP  4167


 Score = 41.8 bits (116),  Expect = 6e-137
 Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
 Frame = +1/-3

Query  1015  APAYLYLCCGKALLCQAKPHVRPVGTKATQL  1107
             A AYLYLCC KALL Q   HVRPV T    L
Sbjct  4245  ARAYLYLCCEKALLFQPVHHVRPVCTTQVSL  4153


 Score = 37.5 bits (103),  Expect = 7e-148
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
 Frame = -2/+2

Query  1094  LVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKL  984
             +V TGLTW   *+SSAF QHK*R*A A+    K++ L
Sbjct  4166  VVQTGLTWCTG*KSSAFSQHK*R*ARATIIKGKRKML  4276


 Score = 34.8 bits (95),  Expect = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 0/15 (0%)
 Frame = -1/+1

Query  1566  WGKA*SWPAIGFRES  1522
             WG+A*SWP IGFRES
Sbjct  3697  WGRA*SWPNIGFRES  3741


 Score = 34.2 bits (93),  Expect = 5e-135
 Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
 Frame = -1/+2

Query  1818  AI*NTASETGANQTQSLVGKARGSLATIT  1732
             AI*+    +G NQ QS VGKARG+LA IT
Sbjct  3443  AI*SAPPASGTNQAQSPVGKARGNLAIIT  3529


 Score = 34.2 bits (93),  Expect = 0.0
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 0/31 (0%)
 Frame = +2/-1

Query  1589  FFDILSLRPNNTTRKSKPSTMNP*TITHAVF  1681
               DILSL+PN   +K++P+TM  * I  A+F
Sbjct  3677  LLDILSLKPNQKKQKARPTTMTS*PIKRALF  3585


 Score = 33.2 bits (90),  Expect = 0.0
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
 Frame = -1/+1

Query  1686  SENTACVIVHGFIVLGLLFLVVLFGLSERMSKK  1588
             ++N A +I H  IV+GL F    FG SE MSK+
Sbjct  3580  AKNNARLIGHEVIVVGLAFCFFWFGFSESMSKR  3678


 Score = 33.2 bits (90),  Expect = 5e-135
 Identities = 18/26 (69%), Positives = 18/26 (69%), Gaps = 0/26 (0%)
 Frame = -1/+1

Query  1092  GADRPNVGFSLTK*RLSAA*IKVGGC  1015
             GADRPNV   L K* L A *IKVG C
Sbjct  4168  GADRPNVVHRLKK*CLFAT*IKVGAC  4245


 Score = 31.5 bits (85),  Expect = 0.0
 Identities = 15/19 (78%), Positives = 15/19 (78%), Gaps = 0/19 (0%)
 Frame = +2/-1

Query  1511  FANALSRNPIAGQL*ALPH  1567
             F   LSRNPI GQL*ALPH
Sbjct  3752  FPVQLSRNPIFGQL*ALPH  3696


 Score = 30.5 bits (82),  Expect = 0.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = -1/+2

Query  996   KAKAEIP*TTNHHYWRTEPIPSR  928
             K K ++  T  HHYW  EPIP+R
Sbjct  4256  KGKRKMLLTM*HHYWTAEPIPTR  4324


 Score = 28.2 bits (75),  Expect = 0.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
 Frame = +1/-2

Query  922   RPT*GNRFCPPIMVVCGLWNLSFCF  996
             + T GNRFC PIMV     +LSF F
Sbjct  4330  KSTGGNRFCCPIMVSHRQ*HLSFSF  4256


 Score = 27.6 bits (73),  Expect = 8e-155
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
 Frame = +3/-2

Query  1590  FLTSFR*GQTTRQEKANPVL*THERSRMQYFRL  1688
             F T F * QT + +K  P+L*  ++S   YF L
Sbjct  3676  F*TYFH*SQTKKNKKLGPLL*PRDQSSGHYFSL  3578


 Score = 26.9 bits (71),  Expect = 6e-137
 Identities = 11/16 (68%), Positives = 14/16 (87%), Gaps = 0/16 (0%)
 Frame = +2/-3

Query  653   KRENTGRLQPC*QSRK  700
             KRE+ G++ PC*QSRK
Sbjct  4587  KREHIGQIPPC*QSRK  4540


 Score = 26.2 bits (69),  Expect = 8e-155
 Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
 Frame = +3/-2

Query  1512  LPMRFREIQ*RANFKLYPT  1568
              P  F EI   ANFKLYPT
Sbjct  3751  FPCSFHEILYSANFKLYPT  3695


 Score = 25.6 bits (67),  Expect = 6e-137
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 0/41 (0%)
 Frame = +1/-3

Query  1591  F*HPFAKAKQHDKKKQTQYYEPMNDHACSIFA*SRF*GLPC  1713
             F H F KAK    K    YY+ + + A  IF   +    PC
Sbjct  3675  FRHTFTKAKPKKTKS*AHYYDLVTNQAGIIFRLIQVLRPPC  3553


>gi|2440224|dbj|AB006689.1|  Agrobacterium rhizogenes plasmid pRi1724 rolA, rolB, rolC gene, 
partial and complete cds
Length=10844

 Score =  433 bits (1301),  Expect = 0.0
 Identities = 203/261 (77%), Positives = 228/261 (87%), Gaps = 0/261 (0%)
 Frame = +1/-1

Query  1852  HITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLD  2031
             HITM P+ LFL RFQP DLT AW+Q+NLF+ I+FAF IYS+ YSK L+ FQKRWA  VLD
Sbjct  3530  HITMAPRSLFLQRFQPRDLTKAWNQLNLFDEIQFAFLIYSQVYSKTLMDFQKRWAQGVLD  3351

Query  2032  LKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQS  2211
             L+EN+PP+ ILKQLA LLKNKVCYHPPM V  PDLAREND+HVFVYLSREKMQKVL+E+S
Sbjct  3350  LEENAPPVVILKQLAHLLKNKVCYHPPMLVDHPDLARENDRHVFVYLSREKMQKVLEEKS  3171

Query  2212  ITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLE  2391
             ITFG+EAVLATT+QPYRS+L LQEM+R HN+AWPH R EEPDLE FIAIFAS+LFIHLLE
Sbjct  3170  ITFGLEAVLATTMQPYRSDLVLQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLE  2991

Query  2392  LKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPEPDLTLRLS  2571
             LKVTNVYGREVACTFF+R+GT NR YDV+ACG TQFTKNA  + RPA  SPEPDLTLRLS
Sbjct  2990  LKVTNVYGREVACTFFVRQGTGNRSYDVIACGITQFTKNAGVMPRPAVPSPEPDLTLRLS  2811

Query  2572  GPDQEGEEGVMKPAAVNLKKE  2634
             GP+Q+ EEG MKPA VNLKKE
Sbjct  2810  GPNQKREEGDMKPAIVNLKKE  2748


 Score =  335 bits (1006),  Expect = 0.0
 Identities = 185/261 (70%), Positives = 202/261 (77%), Gaps = 0/261 (0%)
 Frame = -2/+1

Query  2633  SFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFS  2454
             SFFRFT AGF++PSS    GPESRRVRSGSG+  AGR I  AFLVNCV+PQA TS* RF 
Sbjct  2749  SFFRFTIAGFISPSSRFWLGPESRRVRSGSGDGTAGRGITPAFLVNCVMPQAMTS*ERFP  2928

Query  2453  VPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWR  2274
             VP R KKVQATSLP T VTFNSS+*MNK LAKMA+K S+SGSS R CGQA L* R+ISWR
Sbjct  2929  VPCRTKKVQATSLPYTFVTFNSSR*MNKVLAKMAIKPSRSGSSTRRCGQAML*ARTISWR  3108

Query  2273  ASSLRYG*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QT  2094
               SLR G IVVASTAS PNVMD S STFCIFSR+R*TNTC SFS ARSG* T++GG** T
Sbjct  3109  TRSLR*GCIVVASTASNPNVMDFSSSTFCIFSRDR*TNTCRSFSLARSG*STSMGG**HT  3288

Query  2093  LFFKSSASCLSIYIGGEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHA  1914
             LFF+  ASCLS+  GG FS KSST  AH FWK  R LL*+ L*I KAN I SN+  W  A
Sbjct  3289  LFFRRWASCLSMTTGGAFSSKSSTPWAHLFWKSMRVLL*TWL*IKKANWISSNKLSWFQA  3468

Query  1913  GVRSTG*NRGRNSNLGSIVM*  1851
              VRS G* R RNS+ G+IVM*
Sbjct  3469  FVRSRG*KR*RNSDRGAIVM*  3531


 Score =  318 bits (953),  Expect = 2e-153
 Identities = 165/269 (61%), Positives = 192/269 (71%), Gaps = 0/269 (0%)
 Frame = +3/-3

Query  1851  SHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*QTPPAFPETMGSCSAR  2030
             SHHNGS I IPST+ST+RSH S+EP   +R DPICF NL*P L*Q    FPE +G   A 
Sbjct  3531  SHHNGSSITIPSTLSTTRSHKSLEPA*LVR*DPICFFNL*PSL*QNSHGFPEKVGPRRA*  3352

Query  2031  FEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCICLSFSREDAESAEGTI  2210
             F GK S   +T*TT  + E+QS+LS S+ C S GS  RKRPTCICLS SREDAES  G I
Sbjct  3351  FGGKRSAGGHT*TTGPSSEKQSMLSPSHACRSPGSCQRKRPTCICLSISREDAESTGGKI  3172

Query  2211  HYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FRMLHRHFRKFLVHSLAG  2390
             H++W GGRAGD+D+T+S R RPPGD PCSQ CLAA P G T*   L+RHF K+LVHS AG
Sbjct  3171  HHVWIGGRAGDHDATLS*RPRPPGDGPCSQHCLAAPPRGRT*SGRLYRHFCKYLVHSPAG  2992

Query  2391  VKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATL  2570
             VKSD+ +R+ GSLHLL AAR  KP L*   LRHHT+HQKC RD T+G  +TGARP+PA L
Sbjct  2991  VKSDKCVRQGGSLHLLRAARHWKPLL*RHCLRHHTVHQKCWRDATTGGTVTGARPHPAAL  2812

Query  2571  GA*SGRRGGRHEACCSKPEERSLKPT*TP  2657
             G       G +EAC SK EER+L    +P
Sbjct  2811  GTQPET*RG*YEACYSKSEERNLGDLRSP  2725


 Score =  312 bits (935),  Expect = 4e-147
 Identities = 162/267 (60%), Positives = 191/267 (71%), Gaps = 0/267 (0%)
 Frame = -1/+3

Query  2637  GFFLQVYCSRLHDALLAFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAV  2458
             GFFLQ+Y SRLH  L  FL+  RE QG VWLR*   R+ +   IFGELC AAS ++IGAV
Sbjct  2745  GFFLQIYYSRLHITLFTFLVGSREPQGEVWLR*RYRRSWHHASIFGELCDAASNDVIGAV  2924

Query  2457  FSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLL  2278
              S  P +EGA YL  V++ HF*LQQVNEQGTC+NGD+AF IRF  AAVRPS VV+T+HLL
Sbjct  2925  SSALPHEEGAGYLPAVHICHF*LQQVNEQGTCKNGDKAFQIRFFHAAVRPSNVVSTDHLL  3104

Query  2277  EGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIA  2098
             E E+A I L+R RQHGL SK +G FLQ+FLHLLAR IDKYM VVFS +IR+ +KH R+I 
Sbjct  3105  EDEVATIGLHRGRQHGLQSKRDGFFLQYFLHLLAR*IDKYMSVVFSGKIRVIDKHGRVIT  3284

Query  2097  DFVLQELS*LFKYIYRWRVFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAP  1918
              FV Q++  LFKY +R  VFLQI H   P FLE+ E FAI  AID KSK D +E V L P
Sbjct  3285  YFVFQKMGQLFKYDHRRSVFLQIKHALGPPFLEIHESFAIDLAID*KSKLDLIEQVKLVP  3464

Query  1917  CWSEIYWLKSWKE*QFGIHCDVSWIVT  1837
              + EI WLK+ KE*    HCDV   +T
Sbjct  3465  GFCEISWLKALKE**SRSHCDVRLGIT  3545


 Score =  298 bits (892),  Expect = 2e-134
 Identities = 162/264 (61%), Positives = 173/264 (65%), Gaps = 0/264 (0%)
 Frame = -3/+2

Query  2638  RLLSSGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGG  2459
             R LSS LL QAS  P  +    PR AG GLAPV   P V SR HFW* V CRK   HR G
Sbjct  2744  RFLSSDLL*QASYHPLHVSGWVPRAAG*GLAPVTVPPVVASRQHFW*TV*CRKQ*RHRSG  2923

Query  2458  FQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASP  2279
             FQ LAA RRC+LP  R   SLLTPA E*TR L+KWR*S+ +QV P G AAKQ CEHG SP
Sbjct  2924  FQCLAARRRCRLPPCRTHLSLLTPAGE*TRYLQKWR*SLPDQVLPRGGAAKQCCEHGPSP  3103

Query  2278  GGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDS  2099
             GGR R D V S SPARPP Q *WI P  LSASSRE DRQIHVGRFL  DP D Q  E D+
Sbjct  3104  GGRGRYDRVASWSPARPPIQT*WIFPPVLSASSREIDRQIHVGRFLWQDPGDRQAWEGDN  3283

Query  2098  RLCSSRAQLVV*VYISVESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGS  1919
              LC S    VV*V    E FP N A   P  SGN    CY  GYRL+KQIGS R   +GS
Sbjct  3284  ILCFSEDGPVV*V*PPAERFPPNQARLGPTFSGNP*EFCYRLGYRLKKQIGSHRTS*AGS  3463

Query  1918  MLE*DLLVEIVEGIAIWDPL*CEL  1847
              L *DL+VE VEGI I +PL*CE+
Sbjct  3464  RLL*DLVVESVEGIVIEEPL*CEV  3535


 Score =  296 bits (888),  Expect = 0.0
 Identities = 140/188 (74%), Positives = 154/188 (81%), Gaps = 0/188 (0%)
 Frame = -2/+1

Query  701   VSYFVNMAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGG  522
             +SYF NMAE DLC+LF  LKV DV+SSDEL +H+++AS ER PL EPGE QSMDIDEEGG
Sbjct  4663  ISYFANMAEFDLCALFSSLKVGDVSSSDELKKHIQSASKERTPLTEPGEGQSMDIDEEGG  4842

Query  521   SVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGF  342
                 G+LYLYVDCPTMM CFYGGSLPYN   GAL+TNLPPYQ DV+L EV RGLRQASGF
Sbjct  4843  RQDPGILYLYVDCPTMMRCFYGGSLPYNSRHGALITNLPPYQKDVSLGEVCRGLRQASGF  5022

Query  341   FGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGE  162
             FGY D +RSAYFAA S PG  +KL+ QMELTSTKGK LTFDLYAS QLR EPG LVRHGE
Sbjct  5023  FGYEDVIRSAYFAALSVPGYFVKLDGQMELTSTKGKSLTFDLYASNQLRLEPGALVRHGE  5202

Query  161   CKFAIG*W  138
             CKF + *W
Sbjct  5203  CKFGME*W  5226


 Score =  276 bits (827),  Expect = 5e-136
 Identities = 158/268 (58%), Positives = 179/268 (66%), Gaps = 0/268 (0%)
 Frame = +2/-2

Query  1838  VTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTIANPSCISRNDGL  2017
             V   LTSQW+ + YSF+ FN  IS + G   T S  S+LL  SIA +IA  S ISR  G 
Sbjct  3544  VIPNLTSQWLLDHYSFNAFNHEISQKPGTSLTCSMRSNLLF*SIAKSIAKLSWISRKGGP  3365

Query  2018  LQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMYLSIFLARRCRKC  2197
               C I RKTL R+ YLNN    *+TK  I L CL ++RI  EKTT+MYLSI+LARRCRK 
Sbjct  3364  KACLIWRKTLRRWSYLNNWPIF*KTKYVITLPCLSITRILPEKTTDMYLSIYLARRCRKY  3185

Query  2198  *RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*NASSPFSQVPCS  2377
              R NP  L+WRPCWR R N I A+S SRR SV TTLLGRTAA +NLI  A SPF QVPCS
Sbjct  3184  WRKNPSRLDWRPCWRPRCNPIVATSSSRRWSVLTTLLGRTAAWKNLIWKALSPFLQVPCS  3005

Query  2378  FTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*  2557
             FTCWS*K*   T  R* APS CG+ L+TAPM   LAA H+SPKM +  H R   HRSQT 
Sbjct  3004  FTCWS*K*QMCTAGR*PAPSSCGKALETAPMTSLLAASHSSPKMLA*CHDRRYRHRSQTS  2825

Query  2558  PCDSRGLIRKARRAS*SLLQ*T*RKKPK  2641
             PC SR   R  +R  *SLL * *RKKP+
Sbjct  2824  PCGSRDPTRNVKRVI*SLL**I*RKKPR  2741


 Score =  265 bits (792),  Expect = 0.0
 Identities = 138/190 (72%), Positives = 152/190 (80%), Gaps = 0/190 (0%)
 Frame = +1/-1

Query  130   STNH*PIANLHSPCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK  309
             S  H  I NLHSPCLTN+PGS+LSW+LA*RS VR FPFVEVSSIC  SL   PG E+AAK
Sbjct  5234  SYCHHSIPNLHSPCLTNAPGSSLSWLLA*RSKVRDFPFVEVSSICPSSLTKYPGTESAAK  5055

Query  310   *ALRIGSA*PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQS  489
             *ALRI S+ PK PDACLSPL TS R+TS WYGGRLV SAPC++L*GKDPP*K  IIVGQS
Sbjct  5054  *ALRITSSYPKNPDACLSPLHTSPRLTSFWYGGRLVMSAPCLEL*GKDPP*KHRIIVGQS  4875

Query  490   T*RYSSPWPTDPPSSSISID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHR  669
             T*RYS P    PPSSSISID  SPGS++G+RSFEA +MC  SSSL  TS TL L+KR HR
Sbjct  4874  T*RYSIPGSWRPPSSSISIDWPSPGSVRGVRSFEALWMCFFSSSLDDTSPTLRLEKRAHR  4695

Query  670   SSSAMLTK*E  699
             S+SAML K*E
Sbjct  4694  SNSAMLAK*E  4665


 Score =  215 bits (641),  Expect = 2e-153
 Identities = 111/188 (59%), Positives = 133/188 (70%), Gaps = 0/188 (0%)
 Frame = +3/-3

Query  138   PLADCKLALAMPHQLTRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGA  317
             P    K A AMPHQ TRFEP+L AGI+VE Q LSLC S*LHL IQLD+ P +RKC EVGA
Sbjct  5226  PSLHSKFAFAMPHQRTRFEPELVAGIKVEGQRLSLC*S*LHLPIQLDEVPGDRKCGEVGA  5047

Query  318   PHRIRVTEKT*CLPEPSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVE  497
             P  I V++++*CLP+P   L E++I LVR K+G+E A+  IV Q PSI+A HHRRAVDVE
Sbjct  5046  PDNILVSKES*CLPKPPAHLTETYIFLVRWKIGDERAVPGIVGQRPSIKASHHRRAVDVE  4867

Query  498   VQQPVAHRPSFFVNIHRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVF  677
             VQ P     + FVNIHRL LTRL QG  L+*G L V  *LIA  ++ + +  KE T V F
Sbjct  4866  VQYPRVLATALFVNIHRLALTRLRQGGPLL*GALDVFL*LIAGRYVAYLKTGKEST*VKF  4687

Query  678   SHVNKVGN  701
              HV+KVGN
Sbjct  4686  RHVSKVGN  4663


 Score =  211 bits (631),  Expect = 4e-147
 Identities = 114/187 (60%), Positives = 124/187 (66%), Gaps = 0/187 (0%)
 Frame = -1/+3

Query  699   FLLC*HG*RRPVFSLFQAQSGGCDKQR*AS*THEERLK*A*TLDRAG*ESIDGY*RRRRV  520
             FLLC*HG   P+ SLFQ+       QR*A  TH ERLK A   D AG*  +DGY*RR R 
Sbjct  4665  FLLC*HGGI*PMCSLFQS*GRRRIVQR*AKETHPERLKGADPPDGAG*GPVDGY*RRGRS  4844

Query  519   GGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA*CDSR*GQ*RAQASIRFF  340
               P   VPLRRLPDDDA+LLWRV ALQ  ARR  HQ S VP  C SR*G   A A IR  
Sbjct  4845  PRPWDTVPLRRLPDDDAMLLWRVFALQFQARRAHHQSSTVPERCKSR*GVQGA*AGIRIL  5024

Query  339   RLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA*VRTW*VGEAWRV  160
              +RG Y ERLLR  F P    QA  ADGANF+KGKVSD+RPLCQ PA  RTW VGEAWR+
Sbjct  5025  WIRGCYPERLLRRTFCPRVLRQAGWADGANFNKGKVSDLRPLCQQPAQARTWCVGEAWRM  5204

Query  159   QVCNRLM  139
             Q+ N +M
Sbjct  5205  QIWNGVM  5225


 Score =  200 bits (595),  Expect = 2e-134
 Identities = 115/192 (59%), Positives = 131/192 (68%), Gaps = 0/192 (0%)
 Frame = -3/+2

Query  712   TSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*LDT*RTPQMSVNP*SSRVRINRWILT  533
             T  LFPTLLTW   T VLSF   +    + AMS* +T R PQ S  P* SRVR +RWILT
Sbjct  4652  TPLLFPTLLTWRNLTYVLSFPVLR*ATYRPAMS*RNTSRAPQRSGPP*RSRVRASRWILT  4831

Query  532   KKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGK  353
             K+      G CTSTSTARR*C A MEG C TI   A SSP F RT  M*+S+R   G G+
Sbjct  4832  KRAVAKTLGYCTSTSTARR*CDAFMEGLCPTIPGTARSSPIFHRTRKM*VSVRCAGGLGR  5011

Query  352   HQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPSLGSNLVSW*  173
             HQ    TR+L GAPTS HFLS G SSS M RWS*L+QRES+* ST MPA S GSNLV W*
Sbjct  5012  HQDSLDTRMLSGAPTSPHFLSPGTSSSWMGRWS*LQQRESL*PSTFMPATSSGSNLVRW*  5191

Query  172   GMASASLQSANG  137
             GMA+A+L+ ++G
Sbjct  5192  GMANANLEWSDG  5227


 Score =  200 bits (595),  Expect = 5e-136
 Identities = 101/161 (62%), Positives = 117/161 (72%), Gaps = 0/161 (0%)
 Frame = +2/-2

Query  140   ISRLQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRS  319
             I+  Q C RHASPTHQVR *AGCWH+GR S+TFPL KLAPSAH A*   +G+K++RSRRS
Sbjct  5224  ITPFQICIRHASPTHQVRA*AGCWHKGRRSETFPLLKLAPSAHPA*RSTRGQKVRRSRRS  5045

Query  320   A*DPRNRKNLMLA*ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRG  499
              * PR ++ LM A*A   PHR+ H +GT E W*  R A NC+A+TLH+S ASSSGSRRRG
Sbjct  5044  G*HPRIQRILMPA*APCTPHRDLHLSGTVEDW**ARRAWNCRAKTLHKSIASSSGSRRRG  4865

Query  500   TAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
             T ++G     LRQYPS   HPA S   A LRRS CV LAHR
Sbjct  4864  TVSQGLGDRPLRQYPSTGPHPAPSGGSAPLRRSGCVSLAHR  4742


 Score = 57.0 bits (162),  Expect = 0.0
 Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 0/39 (0%)
 Frame = -3/+1

Query  1105  AVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSK  989
             A  +WCRQA*RG  ++KV PFR+INKGRRVRP +K K +
Sbjct  4279  ATPVWCRQA*RGAQVEKVVPFRNINKGRRVRP*LKEKER  4395


 Score = 52.3 bits (148),  Expect = 0.0
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
 Frame = +3/-1

Query  990   LLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSNTA  1106
             L F    GRTRLPLFMLRKG T S+  PR*AC H +  A
Sbjct  4394  LSFSFNYGRTRLPLFMLRKGTTFSTCAPR*ACLHHTGVA  4278


 Score = 49.4 bits (139),  Expect = 0.0
 Identities = 19/26 (73%), Positives = 23/26 (88%), Gaps = 0/26 (0%)
 Frame = -2/+2

Query  1817  PFKIRRRKLAPIRHSLWSGKPEVVWQ  1740
             PFK+ RR++APIRHSL SGKPE +WQ
Sbjct  3569  PFKVHRRQVAPIRHSLRSGKPEAIWQ  3646


 Score = 48.4 bits (136),  Expect = 0.0
 Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +3/-2

Query  1734  *LLPNYLWLSRPETVSDWRQFPTPYFKW  1817
             *LLP+ LWLSRPETV DW   P  +FKW
Sbjct  3652  *LLPDCLWLSRPETVPDWCHLPAVHFKW  3569


 Score = 47.7 bits (134),  Expect = 2e-153
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 0/41 (0%)
 Frame = +2/-1

Query  1715  LRIDLDVIVAKLPLAFPTRDCV*LAPVSDAVF*MALALAFF  1837
             +  D  VI+A+LPLAFPT DC *L P++    *MAL L  F
Sbjct  3671  IDFDAMVIIARLPLAFPTGDCA*LVPLAGGAL*MALNLPLF  3549


 Score = 46.7 bits (131),  Expect = 5e-136
 Identities = 20/28 (71%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
 Frame = +1/-3

Query  1735  DCCQTTSGFPDQRLCLIGASFRRRILNG  1818
             D CQ  SGFPD+RLCLIGA+ RR  LNG
Sbjct  3651  DYCQIASGFPDRRLCLIGATCRRCTLNG  3568


 Score = 45.7 bits (128),  Expect = 4e-147
 Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
 Frame = -3/+3

Query  1843  SYEKGKCQGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKI  1724
             + E  + Q HLK   G W QS TVSGRESQR  GNNH +I
Sbjct  3543  TME*RQVQCHLKCTAGKWHQSGTVSGRESQRQSGNNHHRI  3662


 Score = 42.1 bits (117),  Expect = 2e-153
 Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
 Frame = +2/-3

Query  1013  THPPTFIYAAERRYFVKLNPTLGLSAP  1093
             +H PTFIY A+R YF  L  TLGLSAP
Sbjct  4371  SHAPTFIYVAKRHYFFNLCTTLGLSAP  4291


 Score = 41.8 bits (116),  Expect = 5e-136
 Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
 Frame = +1/-2

Query  1015  APAYLYLCCGKALLCQAKPHVRPVGTKATQL  1107
             A AYLYLCC KALL Q   HVRPV T    L
Sbjct  4369  ARAYLYLCCEKALLFQPVHHVRPVCTTQVSL  4277


 Score = 37.8 bits (104),  Expect = 0.0
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -1/+3

Query  1686  SENTACVIVHGFIVLGLLFLVVLFGLSERMSKK  1588
             ++N A +I H  IV+GL FL  LFG SE MSK+
Sbjct  3705  AKNNARLIGHEVIVVGLAFLFFLFGFSESMSKR  3803


 Score = 37.5 bits (103),  Expect = 4e-147
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
 Frame = -2/+3

Query  1094  LVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKL  984
             +V TGLTW   *+SSAF QHK*R*A A+    K++ L
Sbjct  4290  VVQTGLTWCTG*KSSAFSQHK*R*ARATIIKGKRKML  4400


 Score = 35.2 bits (96),  Expect = 0.0
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 0/31 (0%)
 Frame = +2/-2

Query  1589  FFDILSLRPNNTTRKSKPSTMNP*TITHAVF  1681
               DILSL+PN   +K++P+TM  * I  A+F
Sbjct  3802  LLDILSLKPNKKNKKARPTTMTS*PIKRALF  3710


 Score = 34.8 bits (95),  Expect = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 0/15 (0%)
 Frame = -1/+3

Query  1566  WGKA*SWPAIGFRES  1522
             WG+A*SWP IGFRES
Sbjct  3822  WGRA*SWPNIGFRES  3866


 Score = 34.2 bits (93),  Expect = 2e-134
 Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
 Frame = -1/+1

Query  1818  AI*NTASETGANQTQSLVGKARGSLATIT  1732
             AI*+    +G NQ QS VGKARG+LA IT
Sbjct  3568  AI*SAPPASGTNQAQSPVGKARGNLAIIT  3654


 Score = 33.2 bits (90),  Expect = 2e-134
 Identities = 18/26 (69%), Positives = 18/26 (69%), Gaps = 0/26 (0%)
 Frame = -1/+2

Query  1092  GADRPNVGFSLTK*RLSAA*IKVGGC  1015
             GADRPNV   L K* L A *IKVG C
Sbjct  4292  GADRPNVVHRLKK*CLFAT*IKVGAC  4369


 Score = 31.5 bits (85),  Expect = 0.0
 Identities = 15/19 (78%), Positives = 15/19 (78%), Gaps = 0/19 (0%)
 Frame = +2/-2

Query  1511  FANALSRNPIAGQL*ALPH  1567
             F   LSRNPI GQL*ALPH
Sbjct  3877  FPVQLSRNPIFGQL*ALPH  3821


 Score = 30.5 bits (82),  Expect = 0.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = -1/+3

Query  996   KAKAEIP*TTNHHYWRTEPIPSR  928
             K K ++  T  HHYW  EPIP+R
Sbjct  4380  KGKRKMLLTM*HHYWTAEPIPTR  4448


 Score = 28.6 bits (76),  Expect = 2e-153
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 0/41 (0%)
 Frame = +1/-1

Query  1591  F*HPFAKAKQHDKKKQTQYYEPMNDHACSIFA*SRF*GLPC  1713
             F H F KAKQ  +K    YY+ + + A  IF   +    PC
Sbjct  3800  FRHTFTKAKQKKQKS*AHYYDLVTNQAGIIFRLIQVLRPPC  3678


 Score = 28.2 bits (75),  Expect = 0.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
 Frame = +1/-1

Query  922   RPT*GNRFCPPIMVVCGLWNLSFCF  996
             + T GNRFC PIMV     +LSF F
Sbjct  4454  KSTGGNRFCCPIMVSHRQ*HLSFSF  4380


 Score = 27.2 bits (72),  Expect = 5e-136
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
 Frame = +3/-3

Query  1590  FLTSFR*GQTTRQEKANPVL*THERSRMQYFRL  1688
             F T F * QT + +K  P+L*  ++S   YF L
Sbjct  3801  F*TYFH*SQTKKTKKLGPLL*PRDQSSGHYFSL  3703


 Score = 26.9 bits (71),  Expect = 5e-136
 Identities = 11/16 (68%), Positives = 14/16 (87%), Gaps = 0/16 (0%)
 Frame = +2/-2

Query  653   KRENTGRLQPC*QSRK  700
             KRE+ G++ PC*QSRK
Sbjct  4711  KREHIGQIPPC*QSRK  4664


 Score = 26.2 bits (69),  Expect = 2e-153
 Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
 Frame = +3/-3

Query  1512  LPMRFREIQ*RANFKLYPT  1568
              P  F EI   ANFKLYPT
Sbjct  3876  FPCSFHEILYSANFKLYPT  3820


 Score = 25.6 bits (67),  Expect = 4e-147
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 0/31 (0%)
 Frame = -2/+1

Query  1682  KILHA*SFMGS*YWVCFFLSCCLALAKGCQK  1590
             KI+ A*    S* W   F   CLAL K C K
Sbjct  3709  KIMPA*LVTRS**WA*LFCFFCLALVKVCLK  3801


>gi|599608|emb|Z29365.1|ARCUCROL  A.rhizogenes (NCPPB2659) DNA from central region of the cucumopine 
T-DNA
Length=5149

 Score =  417 bits (1252),  Expect = 0.0
 Identities = 198/261 (75%), Positives = 221/261 (84%), Gaps = 0/261 (0%)
 Frame = +1/-2

Query  1852  HITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLD  2031
             HITM P+LLFL RFQP DLT AW+Q+NLF  I+FAF IYS+ YSK L+ FQKRWA  VLD
Sbjct  2811  HITMPPRLLFLQRFQPRDLTKAWNQLNLFNEIQFAFLIYSQVYSKTLMDFQKRWAQGVLD  2632

Query  2032  LKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQS  2211
             L+EN      L     +LKNKVCYHPPM V QPDLAREND+HVFVYLSREKMQKVL+E+S
Sbjct  2631  LEENRRRWSYLNNWPIVLKNKVCYHPPMLVDQPDLARENDRHVFVYLSREKMQKVLEEKS  2452

Query  2212  ITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLE  2391
             ITFG+EAVLATT+QPYRS+LALQEM+R HN+AWPH R EEPDLE FIAIFAS+LFIHLLE
Sbjct  2451  ITFGLEAVLATTMQPYRSDLALQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLE  2272

Query  2392  LKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPEPDLTLRLS  2571
             LKVTNVYGREVACTFF+R+GT NR YDV+ACG TQFTKNA  + RPA  SPEPDLTLRLS
Sbjct  2271  LKVTNVYGREVACTFFVRQGTGNRSYDVIACGITQFTKNAGVMPRPAVPSPEPDLTLRLS  2092

Query  2572  GPDQEGEEGVMKPAAVNLKKE  2634
             GP+Q+ EEG MKPA VNLKKE
Sbjct  2091  GPNQKREEGDMKPAIVNLKKE  2029


 Score =  317 bits (949),  Expect = 0.0
 Identities = 177/261 (67%), Positives = 193/261 (73%), Gaps = 0/261 (0%)
 Frame = -2/+2

Query  2633  SFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFS  2454
             SFFRFT AGF++PSS    GPESRRVRSGSG+  AGR I  AFLVNCV+PQA TS* RF 
Sbjct  2030  SFFRFTIAGFISPSSRFWLGPESRRVRSGSGDGTAGRGITPAFLVNCVMPQAMTS*ERFP  2209

Query  2453  VPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWR  2274
             VP R KKVQATSLP T VTFNSS+*MNK LAKMA+K S+SGSS R CGQA L* R+ISWR
Sbjct  2210  VPCRTKKVQATSLPYTFVTFNSSR*MNKVLAKMAIKPSRSGSSTRRCGQAML*ARTISWR  2389

Query  2273  ASSLRYG*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QT  2094
             A SLR G IVVASTAS PNVMD S STFCIFSR+R*TNTC SFS A+SG* T++GG** T
Sbjct  2390  ARSLR*GCIVVASTASNPNVMDFSSSTFCIFSRDR*TNTCRSFSLAKSG*STSMGG**HT  2569

Query  2093  LFFKSSASCLSIYIGGEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHA  1914
             LFF++            FS KSST  AH FWK  R LL*+ L*I  AN I  N+  W  A
Sbjct  2570  LFFRTMGQLFKYDHRRRFSSKSSTPWAHLFWKSMRVLL*TWL*IKNANWISLNKLSWFQA  2749

Query  1913  GVRSTG*NRGRNSNLGSIVM*  1851
              VRS G* R RNSN G IVM*
Sbjct  2750  FVRSRG*KR*RNSNRGGIVM*  2812


 Score =  298 bits (894),  Expect = 1e-148
 Identities = 155/269 (57%), Positives = 184/269 (68%), Gaps = 0/269 (0%)
 Frame = +3/-1

Query  1851  SHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*QTPPAFPETMGSCSAR  2030
             SHHN S I IPST+ST+RSH S+EP   ++ DPIC  NL*P L*Q    FPE +G   A 
Sbjct  2812  SHHNASSITIPSTLSTTRSHKSLEPA*LVQ*DPICIFNL*PSL*QNSHGFPEKVGPRRA*  2633

Query  2031  FEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCICLSFSREDAESAEGTI  2210
             F GK S  +     +   ++QS+LSS + C S G G RKRPTCICLS SREDAES  G I
Sbjct  2632  FGGKPSPVVILKQLAHRSKKQSMLSSPHACRSTGFGQRKRPTCICLSISREDAESTGGKI  2453

Query  2211  HYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FRMLHRHFRKFLVHSLAG  2390
             H++W  GRAGD+D+T+S R RPPGD PCSQ CLAA P G T*    +RHF K+LVHS AG
Sbjct  2452  HHVWIRGRAGDHDATLS*RPRPPGDGPCSQHCLAAPPRGRT*SGRFYRHFCKYLVHSPAG  2273

Query  2391  VKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATL  2570
             VKSD+ +R+ GSLHLL AAR  KP L*   LRHHT+HQKC RD T+G  +TGARP+PA L
Sbjct  2272  VKSDKCVRQGGSLHLLRAARHWKPLL*RHCLRHHTVHQKCWRDATTGGTVTGARPHPAAL  2093

Query  2571  GA*SGRRGGRHEACCSKPEERSLKPT*TP  2657
             G       G +EAC SK EER+L    +P
Sbjct  2092  GTQPET*RG*YEACYSKSEERNLGDLRSP  2006


 Score =  296 bits (888),  Expect = 0.0
 Identities = 140/188 (74%), Positives = 154/188 (81%), Gaps = 0/188 (0%)
 Frame = -2/+1

Query  701   VSYFVNMAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGG  522
             VSYF NMAE DLC+LF  LKV DV+SSDEL +H+++AS ER PL EPGE QSMD+DEEGG
Sbjct  3961  VSYFANMAEFDLCALFSSLKVGDVSSSDELKKHIQSASKERTPLTEPGEGQSMDVDEEGG  4140

Query  521   SVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGF  342
                 G+LYLYVDCPTMM CFYGGSLPYN   GAL+TNLPPYQ DV+L EV RGLRQASGF
Sbjct  4141  RQDPGILYLYVDCPTMMRCFYGGSLPYNSTHGALITNLPPYQKDVSLGEVCRGLRQASGF  4320

Query  341   FGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGE  162
             FGY D +RSAYFAA S PG  +KL+ QMELTSTKGK LTFDLYAS QLR EPG LVRHGE
Sbjct  4321  FGYEDVIRSAYFAALSVPGYFVKLDGQMELTSTKGKSLTFDLYASNQLRLEPGALVRHGE  4500

Query  161   CKFAIG*W  138
             CKF + *W
Sbjct  4501  CKFGME*W  4524


 Score =  277 bits (828),  Expect = 1e-130
 Identities = 151/264 (57%), Positives = 166/264 (62%), Gaps = 0/264 (0%)
 Frame = -3/+3

Query  2638  RLLSSGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGG  2459
             R LSS LL QAS  P  +    PR AG GLAPV   P V SR HFW* V CRK   HR G
Sbjct  2025  RFLSSDLL*QASYHPLHVSGWVPRAAG*GLAPVTVPPVVASRQHFW*TV*CRKQ*RHRSG  2204

Query  2458  FQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASP  2279
             FQ LAA RRC+LP  R   SLLTPA E*TR L+KWR*++ +QV P G AAKQ CEHG SP
Sbjct  2205  FQCLAARRRCRLPPCRTHLSLLTPAGE*TRYLQKWR*NLPDQVLPRGGAAKQCCEHGPSP  2384

Query  2278  GGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDS  2099
             GGR R D V S SPARP  Q *WI P  LSASSRE DRQIHVGRFL P+P D Q   DD+
Sbjct  2385  GGRGRYDRVASWSPARPLIQT*WIFPPVLSASSREIDRQIHVGRFLWPNPVDRQAWGDDN  2564

Query  2098  RLCSSRAQLVV*VYISVESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGS  1919
              LC            + + FP N A   P  SGN    CY  GYRL+ QIGS     +GS
Sbjct  2565  ILCFLERWASCLSMTTGDGFPPNQARLGPTFSGNP*EFCYRLGYRLKMQIGSH*TS*AGS  2744

Query  1918  MLE*DLLVEIVEGIAIWDPL*CEL  1847
              L *DL+VE VEGI I + L*CE+
Sbjct  2745  RLL*DLVVESVEGIVIEEAL*CEV  2816


 Score =  265 bits (792),  Expect = 0.0
 Identities = 138/191 (72%), Positives = 152/191 (79%), Gaps = 0/191 (0%)
 Frame = +1/-3

Query  130   STNH*PIANLHSPCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK  309
             S  H  I NLHSPCLTN+PGS+LSW+LA*RS VR FPFVEVSSIC  SL   PG E+AAK
Sbjct  4532  SYCHHSIPNLHSPCLTNAPGSSLSWLLA*RSKVRDFPFVEVSSICPSSLTKYPGTESAAK  4353

Query  310   *ALRIGSA*PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQS  489
             *ALRI S+ PK PDACLSPL TS R+TS WYGGRLV SAPC++L*GKDPP*K  IIVGQS
Sbjct  4352  *ALRITSSYPKNPDACLSPLHTSPRLTSFWYGGRLVMSAPCVEL*GKDPP*KHRIIVGQS  4173

Query  490   T*RYSSPWPTDPPSSSISID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHR  669
             T*RYS P    PPSSS SID  SPGS++G+RSFEA +MC  SSSL  TS TL L+KR HR
Sbjct  4172  T*RYSIPGSWRPPSSSTSIDWPSPGSVRGVRSFEALWMCFFSSSLDDTSPTLRLEKRAHR  3993

Query  670   SSSAMLTK*ET  702
             S+SAML K*ET
Sbjct  3992  SNSAMLAK*ET  3960


 Score =  238 bits (711),  Expect = 5e-141
 Identities = 120/184 (65%), Positives = 138/184 (75%), Gaps = 0/184 (0%)
 Frame = -1/+1

Query  2637  GFFLQVYCSRLHDALLAFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAV  2458
             GFFLQ+Y SRLH  L  FL+  RE QG VWLR*   R+ +   IFGELC AAS ++IGAV
Sbjct  2026  GFFLQIYYSRLHITLFTFLVGSREPQGEVWLR*RYRRSWHHASIFGELCDAASNDVIGAV  2205

Query  2457  FSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLL  2278
              S  P +EGA YL  V++ HF*LQQVNEQGTC+NGD+ F IRF  AAVRPS VV+T+HLL
Sbjct  2206  SSALPHEEGAGYLPAVHICHF*LQQVNEQGTCKNGDKTFQIRFFHAAVRPSNVVSTDHLL  2385

Query  2277  EGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIA  2098
             EGE+A I L+R RQHGL SK +G FLQ+FLHLLAR IDKYM VVFS QIRL +KH  MI 
Sbjct  2386  EGEVATIGLHRGRQHGL*SKRDGFFLQYFLHLLAR*IDKYMSVVFSGQIRLIDKHGGMIT  2565

Query  2097  DFVL  2086
              FV 
Sbjct  2566  YFVF  2577


 Score =  220 bits (657),  Expect = 3e-126
 Identities = 119/188 (63%), Positives = 133/188 (70%), Gaps = 0/188 (0%)
 Frame = +2/-3

Query  2078  SS*RTKSAIILLCLLVSRIWLEKTTNMYLSIFLARRCRKC*RNNPLHLEWRPCWRQRFNH  2257
             S *+TK  II  CL ++RIW EKTT+MYLSI+LARRCRK  R NP  L+ RPCWR R N 
Sbjct  2585  SF*KTKYVIIPPCLSINRIWPEKTTDMYLSIYLARRCRKYWRKNPSRLD*RPCWRPRCNP  2406

Query  2258  IGASSPSRRCSVFTTLLGRTAARRNLI*NASSPFSQVPCSFTCWS*K*PTFTGER*LAPS  2437
             I A+SPSRR SV TTLLGRTAA +NLI    SPF QVPCSFTCWS*K*   T  R* APS
Sbjct  2405  IVATSPSRRWSVLTTLLGRTAAWKNLIWKVLSPFLQVPCSFTCWS*K*QMCTAGR*PAPS  2226

Query  2438  FCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*PCDSRGLIRKARRAS*SLLQ  2617
              CG+ L+TAPM   LAA H+SPKM +  H R   HRSQT PC SR   R  +R  *SLL 
Sbjct  2225  SCGKALETAPMTSLLAASHSSPKMLA*CHDRRYRHRSQTSPCGSRDPTRNVKRVI*SLL*  2046

Query  2618  *T*RKKPK  2641
             * *RKKP+
Sbjct  2045  *I*RKKPR  2022


 Score =  210 bits (628),  Expect = 1e-148
 Identities = 108/188 (57%), Positives = 131/188 (69%), Gaps = 0/188 (0%)
 Frame = +3/-2

Query  138   PLADCKLALAMPHQLTRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGA  317
             P    K A AMPHQ TRFEP+L AGI+VE Q LSLC S* HL IQLD+ P +RKC EVGA
Sbjct  4524  PSLHSKFAFAMPHQRTRFEPELVAGIKVEGQRLSLC*S*FHLPIQLDEVPGDRKCGEVGA  4345

Query  318   PHRIRVTEKT*CLPEPSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVE  497
             P  I V++++*CLP+P   L E++I LV  K+G+E A+  IV Q PSI+A HHRRA+DVE
Sbjct  4344  PDNILVSKES*CLPKPPAHLTETYIFLVWWKIGDERAVRGIVGQRPSIKASHHRRAIDVE  4165

Query  498   VQQPVAHRPSFFVNIHRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVF  677
             VQ P     + FVNIHRL LTRL QG  L+*G L V  *LIA  ++ + +  KE T V F
Sbjct  4164  VQYPRVLATALFVNIHRLALTRLRQGGPLL*GALDVFL*LIAGRYVAYLKTGKEST*VKF  3985

Query  678   SHVNKVGN  701
              HV+KVGN
Sbjct  3984  RHVSKVGN  3961


 Score =  210 bits (626),  Expect = 5e-141
 Identities = 113/194 (58%), Positives = 125/194 (64%), Gaps = 0/194 (0%)
 Frame = -1/+3

Query  720   LWVQATCFLLC*HG*RRPVFSLFQAQSGGCDKQR*AS*THEERLK*A*TLDRAG*ESIDG  541
             L  +  CFLLC*HG   P+ SLFQ+       QR*A  TH ERLK A   D AG*  +DG
Sbjct  3942  LGARHYCFLLC*HGGI*PMCSLFQS*GRRRIVQR*AKETHPERLKGADPPDGAG*GPVDG  4121

Query  540   Y*RRRRVGGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA*CDSR*GQ*RA  361
              *RR R   P   VPLRRLPDDDA+LLWRV ALQ  ARR  HQ S +P  C SR*G   A
Sbjct  4122  C*RRGRSPRPWDTVPLRRLPDDDAMLLWRVFALQFHARRAHHQSSTIPERCKSR*GVQGA  4301

Query  360   QASIRFFRLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA*VRTW*  181
              A IR   +RG Y ERLLR  F P    QA  ADG NF+KGKVSD+RPLCQ PA  RTW 
Sbjct  4302  *AGIRILWIRGCYPERLLRRTFCPRVLRQAGWADGTNFNKGKVSDLRPLCQQPAQARTWC  4481

Query  180   VGEAWRVQVCNRLM  139
             VGEAWR+Q+ N +M
Sbjct  4482  VGEAWRMQIWNGVM  4523


 Score =  193 bits (576),  Expect = 1e-130
 Identities = 111/192 (57%), Positives = 129/192 (67%), Gaps = 0/192 (0%)
 Frame = -3/+2

Query  712   TSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*LDT*RTPQMSVNP*SSRVRINRWILT  533
             T  LFPTLLTW   T VLSF   +    + AMS* +T R PQ S  P* SRVR +RW+LT
Sbjct  3950  TPLLFPTLLTWRNLTYVLSFPVLR*ATYRPAMS*RNTSRAPQRSGPP*RSRVRASRWMLT  4129

Query  532   KKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGK  353
             K+      G CTSTS ARR*C A MEG C TI   A SSP F  T  M*+S+R   G G+
Sbjct  4130  KRAVAKTLGYCTSTSIARR*CDAFMEGLCPTIPRTARSSPIFHHTRKM*VSVRCAGGLGR  4309

Query  352   HQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPSLGSNLVSW*  173
             HQ    TR+L GAPTS HFLS G SSS M RW+*L+QRES+* ST MPA S GSNLV W*
Sbjct  4310  HQDSLDTRMLSGAPTSPHFLSPGTSSSWMGRWN*LQQRESL*PSTFMPATSSGSNLVRW*  4489

Query  172   GMASASLQSANG  137
             GMA+A+L+ ++G
Sbjct  4490  GMANANLEWSDG  4525


 Score =  193 bits (575),  Expect = 3e-126
 Identities = 97/161 (60%), Positives = 115/161 (71%), Gaps = 0/161 (0%)
 Frame = +2/-1

Query  140   ISRLQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRS  319
             I+  Q C RHASPTHQVR *AGCWH+GR S+TFPL KL PSAH A*   +G+K++RSRRS
Sbjct  4522  ITPFQICIRHASPTHQVRA*AGCWHKGRRSETFPLLKLVPSAHPA*RSTRGQKVRRSRRS  4343

Query  320   A*DPRNRKNLMLA*ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRG  499
              * PR ++ LM A*A   PHR+ H +G  E W*  R A NC+A+TLH+S ASSSG+RRRG
Sbjct  4342  G*HPRIQRILMPA*APCTPHRDLHLSGMVEDW**ARRAWNCRAKTLHKSIASSSGNRRRG  4163

Query  500   TAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
             T ++G     LRQ+PS   HPA S   A LRRS CV LAHR
Sbjct  4162  TVSQGLGDRPLRQHPSTGPHPAPSGGSAPLRRSGCVSLAHR  4040


 Score = 65.6 bits (188),  Expect = 5e-141
 Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 0/69 (0%)
 Frame = -1/+1

Query  2043  VFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAPCWSEIYWLKSWKE*QFGI  1864
             VFLQI H   P FLE+ E FAI  AID K K D +E V L P + EI WLK+ KE*    
Sbjct  2620  VFLQIKHALGPPFLEIHESFAIDLAID*KCKLDLIEQVKLVPGFCEISWLKALKE**SRR  2799

Query  1863  HCDVSWIVT  1837
             HCDV   +T
Sbjct  2800  HCDVRLGIT  2826


 Score = 58.0 bits (165),  Expect = 0.0
 Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 0/39 (0%)
 Frame = -3/+1

Query  1105  AVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSK  989
             A  +WCRQA*RG  ++KV PFRSINKGRRVRP +K K +
Sbjct  3577  ATPVWCRQA*RGAQVEKVVPFRSINKGRRVRP*LKEKER  3693


 Score = 52.3 bits (148),  Expect = 0.0
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
 Frame = +3/-3

Query  990   LLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSNTA  1106
             L F    GRTRLPLFMLRKG T S+  PR*AC H +  A
Sbjct  3692  LSFSFNYGRTRLPLFMLRKGTTFSTCAPR*ACLHHTGVA  3576


 Score = 49.4 bits (139),  Expect = 0.0
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3/+1

Query  1822  QGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKI  1724
             Q HLKY  G W QS TVSGRESQR  GNNH +I
Sbjct  2845  QCHLKYAAGKWHQSATVSGRESQRQSGNNHHRI  2943


 Score = 46.4 bits (130),  Expect = 0.0
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
 Frame = +2/-2

Query  1715  LRIDLDVIVAKLPLAFPTRDCV*LAPVSDAVF*MALALAFF  1837
             +  D  VI+A+LPLAFPT +C *L P++  V *MAL L  F
Sbjct  2952  IDFDAMVIIARLPLAFPTGNCG*LMPLAGGVL*MALNLPLF  2830


 Score = 45.1 bits (126),  Expect = 1e-148
 Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +3/-3

Query  1734  *LLPNYLWLSRPETVSDWRQFPTPYFKW  1817
             *LLP+ LWLSRPETV+D    P  YFKW
Sbjct  2933  *LLPDCLWLSRPETVAD*CHLPAAYFKW  2850


 Score = 44.4 bits (124),  Expect = 5e-141
 Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 0/26 (0%)
 Frame = -2/+3

Query  1817  PFKIRRRKLAPIRHSLWSGKPEVVWQ  1740
             PFK+RRR++A I HS  SGKPE +WQ
Sbjct  2850  PFKVRRRQVASISHSFRSGKPEAIWQ  2927


 Score = 43.8 bits (122),  Expect = 1e-148
 Identities = 19/27 (70%), Positives = 21/27 (77%), Gaps = 0/27 (0%)
 Frame = +2/-2

Query  1013  THPPTFIYAAERRYFVKLNPTLGLSAP  1093
             +H PTFIYAA+R YF  L  TLGLSAP
Sbjct  3669  SHAPTFIYAAKRHYFFNLCTTLGLSAP  3589


 Score = 42.8 bits (119),  Expect = 3e-126
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 0/70 (0%)
 Frame = +2/-3

Query  1838  VTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTIANPSCISRNDGL  2017
             V   LTSQ + + YSF+ FN  IS + G   T S  S+L   SIA +IA  S ISR  G 
Sbjct  2825  VIPNLTSQCLLDYYSFNAFNHEISQKPGTSLTCSMRSNLHF*SIAKSIAKLSWISRKGGP  2646

Query  2018  LQC*I*RKTL  2047
               C I RKT+
Sbjct  2645  KACLIWRKTV  2616


 Score = 42.8 bits (119),  Expect = 0.0
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 0/38 (0%)
 Frame = -1/+1

Query  1590  KDAHNWEEWGKA*SWPAIGFRESALANVKIAAFKILFL  1477
             KD  N E WG+A*S P IGFRES   N+ + A  +LF+
Sbjct  3079  KDT*NGEGWGRA*SLPNIGFRESCTGNLLMVALSMLFI  3192


 Score = 41.8 bits (116),  Expect = 3e-126
 Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
 Frame = +1/-1

Query  1015  APAYLYLCCGKALLCQAKPHVRPVGTKATQL  1107
             A AYLYLCC KALL Q   HVRPV T    L
Sbjct  3667  ARAYLYLCCEKALLFQPVHHVRPVCTTQVSL  3575


 Score = 40.4 bits (112),  Expect = 3e-126
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +1/-1

Query  1735  DCCQTTSGFPDQRLCLIGASFRRRILNG  1818
             D CQ  SGFPD++L LI A+ RRR LNG
Sbjct  2932  DYCQIASGFPDRKLWLIDATCRRRTLNG  2849


 Score = 37.5 bits (103),  Expect = 5e-141
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
 Frame = -2/+3

Query  1094  LVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKL  984
             +V TGLTW   *+SSAF QHK*R*A A+    K++ L
Sbjct  3588  VVQTGLTWCTG*KSSAFSQHK*R*ARATIIKGKRKML  3698


 Score = 36.5 bits (100),  Expect = 0.0
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 0/29 (0%)
 Frame = +3/-1

Query  1494  MQQSSRLPMRFREIQ*RANFKLYPTPPNY  1580
             +Q S+  P  F E Q  ANFKLYPTPP++
Sbjct  3175  VQPSTSCPCSFHESQYSANFKLYPTPPHF  3089


 Score = 35.2 bits (96),  Expect = 1e-148
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
 Frame = +1/-2

Query  1492  ECSNLHVCQCAFAKSNSGPTLSFTPLLPIMGIL  1590
             EC++  V + AF K+N   TLS TP LPI GI 
Sbjct  3177  ECNHQQVARAAFTKANIRQTLSSTPPLPISGIF  3079


 Score = 34.8 bits (95),  Expect = 3e-126
 Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
 Frame = +2/-3

Query  1484  SILNAAIFTFANALSRNPIAGQL*ALPHSSQLWASF  1591
             SI +A I      LSR PI G+L*ALPH S    SF
Sbjct  3185  SIESATINKLPVQLSRKPIFGKL*ALPHPSPFQVSF  3078


 Score = 34.8 bits (95),  Expect = 1e-130
 Identities = 19/26 (73%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
 Frame = -1/+2

Query  1092  GADRPNVGFSLTK*RLSAA*IKVGGC  1015
             GADRPNV   L K* L AA*IKVG C
Sbjct  3590  GADRPNVVHRLKK*CLFAA*IKVGAC  3667


 Score = 34.5 bits (94),  Expect = 5e-141
 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = -3/+3

Query  1573  GGVG*SLKLARYWISRKRIGKREDCCIQD  1487
             GGVG*SLK A YW+S K  G+  D C  D
Sbjct  3096  GGVG*SLKFAEYWLS*KLHGQLVDGCTLD  3182


 Score = 34.2 bits (93),  Expect = 1e-130
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 0/40 (0%)
 Frame = -2/+2

Query  1598  CQKRMPIIGRSGVKLKVGPLLDFAKAHWQT*RLLHSRYFF  1479
             C  ++P +GR GV+LKV  +L F KA   T   LHSR + 
Sbjct  3071  CI*KIPEMGRGGVELKVCRILAFVKAARATC*WLHSRCYL  3190


 Score = 33.2 bits (90),  Expect = 1e-130
 Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
 Frame = -1/+2

Query  1818  AI*NTASETGANQTQSLVGKARGSLATIT  1732
             AI*+T   +G NQ Q  VGKARG+LA IT
Sbjct  2849  AI*STPPASGINQPQFPVGKARGNLAIIT  2935


 Score = 30.5 bits (82),  Expect = 0.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = -1/+3

Query  996   KAKAEIP*TTNHHYWRTEPIPSR  928
             K K ++  T  HHYW  EPIP+R
Sbjct  3678  KGKRKMLLTM*HHYWTAEPIPTR  3746


 Score = 28.9 bits (77),  Expect = 3e-126
 Identities = 12/17 (70%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
 Frame = +2/-1

Query  653   KRENTGRLQPC*QSRKQ  703
             KRE+ G++ PC*QSRKQ
Sbjct  4009  KREHIGQIPPC*QSRKQ  3959


 Score = 28.2 bits (75),  Expect = 0.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
 Frame = +1/-3

Query  922   RPT*GNRFCPPIMVVCGLWNLSFCF  996
             + T GNRFC PIMV     +LSF F
Sbjct  3752  KSTSGNRFCCPIMVSHRQ*HLSFSF  3678


 Score = 27.2 bits (72),  Expect = 0.0
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
 Frame = +2/-3

Query  2630  KKPKADLNSPCRQPLSMSLS*VLC  2701
             +K    L  PCR PL++SL   LC
Sbjct  2036  RKKPRRLEVPCRPPLTISLVGFLC  1965


>gi|6706117|emb|AJ271050.1|ARH271050  Agrobacterium rhizogenes plasmid pRi2659 T-DNA sequence, ORF2, 
ORF3, ORF4, ORF8, ORF10, ORF11, ORF12, ORF13, ORF13a, ORF14 
and cus gene
Length=16110

 Score =  417 bits (1252),  Expect = 0.0
 Identities = 198/261 (75%), Positives = 221/261 (84%), Gaps = 0/261 (0%)
 Frame = +1/-1

Query  1852  HITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLD  2031
             HITM P+LLFL RFQP DLT AW+Q+NLF  I+FAF IYS+ YSK L+ FQKRWA  VLD
Sbjct  9072  HITMPPRLLFLQRFQPRDLTKAWNQLNLFNEIQFAFLIYSQVYSKTLMDFQKRWAQGVLD  8893

Query  2032  LKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQS  2211
             L+EN      L     +LKNKVCYHPPM V QPDLAREND+HVFVYLSREKMQKVL+E+S
Sbjct  8892  LEENRRRWSYLNNWPIVLKNKVCYHPPMLVDQPDLARENDRHVFVYLSREKMQKVLEEKS  8713

Query  2212  ITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLE  2391
             ITFG+EAVLATT+QPYRS+LALQEM+R HN+AWPH R EEPDLE FIAIFAS+LFIHLLE
Sbjct  8712  ITFGLEAVLATTMQPYRSDLALQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLE  8533

Query  2392  LKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPEPDLTLRLS  2571
             LKVTNVYGREVACTFF+R+GT NR YDV+ACG TQFTKNA  + RPA  SPEPDLTLRLS
Sbjct  8532  LKVTNVYGREVACTFFVRQGTGNRSYDVIACGITQFTKNAGVMPRPAVPSPEPDLTLRLS  8353

Query  2572  GPDQEGEEGVMKPAAVNLKKE  2634
             GP+Q+ EEG MKPA VNLKKE
Sbjct  8352  GPNQKREEGDMKPAIVNLKKE  8290


 Score =  317 bits (949),  Expect = 0.0
 Identities = 177/261 (67%), Positives = 193/261 (73%), Gaps = 0/261 (0%)
 Frame = -2/+2

Query  2633  SFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFS  2454
             SFFRFT AGF++PSS    GPESRRVRSGSG+  AGR I  AFLVNCV+PQA TS* RF 
Sbjct  8291  SFFRFTIAGFISPSSRFWLGPESRRVRSGSGDGTAGRGITPAFLVNCVMPQAMTS*ERFP  8470

Query  2453  VPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWR  2274
             VP R KKVQATSLP T VTFNSS+*MNK LAKMA+K S+SGSS R CGQA L* R+ISWR
Sbjct  8471  VPCRTKKVQATSLPYTFVTFNSSR*MNKVLAKMAIKPSRSGSSTRRCGQAML*ARTISWR  8650

Query  2273  ASSLRYG*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QT  2094
             A SLR G IVVASTAS PNVMD S STFCIFSR+R*TNTC SFS A+SG* T++GG** T
Sbjct  8651  ARSLR*GCIVVASTASNPNVMDFSSSTFCIFSRDR*TNTCRSFSLAKSG*STSMGG**HT  8830

Query  2093  LFFKSSASCLSIYIGGEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHA  1914
             LFF++            FS KSST  AH FWK  R LL*+ L*I  AN I  N+  W  A
Sbjct  8831  LFFRTMGQLFKYDHRRRFSSKSSTPWAHLFWKSMRVLL*TWL*IKNANWISLNKLSWFQA  9010

Query  1913  GVRSTG*NRGRNSNLGSIVM*  1851
              VRS G* R RNSN G IVM*
Sbjct  9011  FVRSRG*KR*RNSNRGGIVM*  9073


 Score =  298 bits (894),  Expect = 1e-146
 Identities = 155/269 (57%), Positives = 184/269 (68%), Gaps = 0/269 (0%)
 Frame = +3/-3

Query  1851  SHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*QTPPAFPETMGSCSAR  2030
             SHHN S I IPST+ST+RSH S+EP   ++ DPIC  NL*P L*Q    FPE +G   A 
Sbjct  9073  SHHNASSITIPSTLSTTRSHKSLEPA*LVQ*DPICIFNL*PSL*QNSHGFPEKVGPRRA*  8894

Query  2031  FEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCICLSFSREDAESAEGTI  2210
             F GK S  +     +   ++QS+LSS + C S G G RKRPTCICLS SREDAES  G I
Sbjct  8893  FGGKPSPVVILKQLAHRSKKQSMLSSPHACRSTGFGQRKRPTCICLSISREDAESTGGKI  8714

Query  2211  HYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FRMLHRHFRKFLVHSLAG  2390
             H++W  GRAGD+D+T+S R RPPGD PCSQ CLAA P G T*    +RHF K+LVHS AG
Sbjct  8713  HHVWIRGRAGDHDATLS*RPRPPGDGPCSQHCLAAPPRGRT*SGRFYRHFCKYLVHSPAG  8534

Query  2391  VKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATL  2570
             VKSD+ +R+ GSLHLL AAR  KP L*   LRHHT+HQKC RD T+G  +TGARP+PA L
Sbjct  8533  VKSDKCVRQGGSLHLLRAARHWKPLL*RHCLRHHTVHQKCWRDATTGGTVTGARPHPAAL  8354

Query  2571  GA*SGRRGGRHEACCSKPEERSLKPT*TP  2657
             G       G +EAC SK EER+L    +P
Sbjct  8353  GTQPET*RG*YEACYSKSEERNLGDLRSP  8267


 Score =  296 bits (888),  Expect = 0.0
 Identities = 140/188 (74%), Positives = 154/188 (81%), Gaps = 0/188 (0%)
 Frame = -2/+1

Query  701    VSYFVNMAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGG  522
              VSYF NMAE DLC+LF  LKV DV+SSDEL +H+++AS ER PL EPGE QSMD+DEEGG
Sbjct  10222  VSYFANMAEFDLCALFSSLKVGDVSSSDELKKHIQSASKERTPLTEPGEGQSMDVDEEGG  10401

Query  521    SVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGF  342
                  G+LYLYVDCPTMM CFYGGSLPYN   GAL+TNLPPYQ DV+L EV RGLRQASGF
Sbjct  10402  RQDPGILYLYVDCPTMMRCFYGGSLPYNSTHGALITNLPPYQKDVSLGEVCRGLRQASGF  10581

Query  341    FGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGE  162
              FGY D +RSAYFAA S PG  +KL+ QMELTSTKGK LTFDLYAS QLR EPG LVRHGE
Sbjct  10582  FGYEDVIRSAYFAALSVPGYFVKLDGQMELTSTKGKSLTFDLYASNQLRLEPGALVRHGE  10761

Query  161    CKFAIG*W  138
              CKF + *W
Sbjct  10762  CKFGME*W  10785


 Score =  277 bits (828),  Expect = 1e-128
 Identities = 151/264 (57%), Positives = 166/264 (62%), Gaps = 0/264 (0%)
 Frame = -3/+3

Query  2638  RLLSSGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGG  2459
             R LSS LL QAS  P  +    PR AG GLAPV   P V SR HFW* V CRK   HR G
Sbjct  8286  RFLSSDLL*QASYHPLHVSGWVPRAAG*GLAPVTVPPVVASRQHFW*TV*CRKQ*RHRSG  8465

Query  2458  FQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASP  2279
             FQ LAA RRC+LP  R   SLLTPA E*TR L+KWR*++ +QV P G AAKQ CEHG SP
Sbjct  8466  FQCLAARRRCRLPPCRTHLSLLTPAGE*TRYLQKWR*NLPDQVLPRGGAAKQCCEHGPSP  8645

Query  2278  GGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDS  2099
             GGR R D V S SPARP  Q *WI P  LSASSRE DRQIHVGRFL P+P D Q   DD+
Sbjct  8646  GGRGRYDRVASWSPARPLIQT*WIFPPVLSASSREIDRQIHVGRFLWPNPVDRQAWGDDN  8825

Query  2098  RLCSSRAQLVV*VYISVESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGS  1919
              LC            + + FP N A   P  SGN    CY  GYRL+ QIGS     +GS
Sbjct  8826  ILCFLERWASCLSMTTGDGFPPNQARLGPTFSGNP*EFCYRLGYRLKMQIGSH*TS*AGS  9005

Query  1918  MLE*DLLVEIVEGIAIWDPL*CEL  1847
              L *DL+VE VEGI I + L*CE+
Sbjct  9006  RLL*DLVVESVEGIVIEEAL*CEV  9077


 Score =  265 bits (792),  Expect = 0.0
 Identities = 138/191 (72%), Positives = 152/191 (79%), Gaps = 0/191 (0%)
 Frame = +1/-2

Query  130    STNH*PIANLHSPCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK  309
              S  H  I NLHSPCLTN+PGS+LSW+LA*RS VR FPFVEVSSIC  SL   PG E+AAK
Sbjct  10793  SYCHHSIPNLHSPCLTNAPGSSLSWLLA*RSKVRDFPFVEVSSICPSSLTKYPGTESAAK  10614

Query  310    *ALRIGSA*PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQS  489
              *ALRI S+ PK PDACLSPL TS R+TS WYGGRLV SAPC++L*GKDPP*K  IIVGQS
Sbjct  10613  *ALRITSSYPKNPDACLSPLHTSPRLTSFWYGGRLVMSAPCVEL*GKDPP*KHRIIVGQS  10434

Query  490    T*RYSSPWPTDPPSSSISID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHR  669
              T*RYS P    PPSSS SID  SPGS++G+RSFEA +MC  SSSL  TS TL L+KR HR
Sbjct  10433  T*RYSIPGSWRPPSSSTSIDWPSPGSVRGVRSFEALWMCFFSSSLDDTSPTLRLEKRAHR  10254

Query  670    SSSAMLTK*ET  702
              S+SAML K*ET
Sbjct  10253  SNSAMLAK*ET  10221


 Score =  238 bits (711),  Expect = 2e-138
 Identities = 120/184 (65%), Positives = 138/184 (75%), Gaps = 0/184 (0%)
 Frame = -1/+1

Query  2637  GFFLQVYCSRLHDALLAFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAV  2458
             GFFLQ+Y SRLH  L  FL+  RE QG VWLR*   R+ +   IFGELC AAS ++IGAV
Sbjct  8287  GFFLQIYYSRLHITLFTFLVGSREPQGEVWLR*RYRRSWHHASIFGELCDAASNDVIGAV  8466

Query  2457  FSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLL  2278
              S  P +EGA YL  V++ HF*LQQVNEQGTC+NGD+ F IRF  AAVRPS VV+T+HLL
Sbjct  8467  SSALPHEEGAGYLPAVHICHF*LQQVNEQGTCKNGDKTFQIRFFHAAVRPSNVVSTDHLL  8646

Query  2277  EGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIA  2098
             EGE+A I L+R RQHGL SK +G FLQ+FLHLLAR IDKYM VVFS QIRL +KH  MI 
Sbjct  8647  EGEVATIGLHRGRQHGL*SKRDGFFLQYFLHLLAR*IDKYMSVVFSGQIRLIDKHGGMIT  8826

Query  2097  DFVL  2086
              FV 
Sbjct  8827  YFVF  8838


 Score =  220 bits (657),  Expect = 2e-123
 Identities = 119/188 (63%), Positives = 133/188 (70%), Gaps = 0/188 (0%)
 Frame = +2/-2

Query  2078  SS*RTKSAIILLCLLVSRIWLEKTTNMYLSIFLARRCRKC*RNNPLHLEWRPCWRQRFNH  2257
             S *+TK  II  CL ++RIW EKTT+MYLSI+LARRCRK  R NP  L+ RPCWR R N 
Sbjct  8846  SF*KTKYVIIPPCLSINRIWPEKTTDMYLSIYLARRCRKYWRKNPSRLD*RPCWRPRCNP  8667

Query  2258  IGASSPSRRCSVFTTLLGRTAARRNLI*NASSPFSQVPCSFTCWS*K*PTFTGER*LAPS  2437
             I A+SPSRR SV TTLLGRTAA +NLI    SPF QVPCSFTCWS*K*   T  R* APS
Sbjct  8666  IVATSPSRRWSVLTTLLGRTAAWKNLIWKVLSPFLQVPCSFTCWS*K*QMCTAGR*PAPS  8487

Query  2438  FCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*PCDSRGLIRKARRAS*SLLQ  2617
              CG+ L+TAPM   LAA H+SPKM +  H R   HRSQT PC SR   R  +R  *SLL 
Sbjct  8486  SCGKALETAPMTSLLAASHSSPKMLA*CHDRRYRHRSQTSPCGSRDPTRNVKRVI*SLL*  8307

Query  2618  *T*RKKPK  2641
             * *RKKP+
Sbjct  8306  *I*RKKPR  8283


 Score =  210 bits (628),  Expect = 1e-146
 Identities = 108/188 (57%), Positives = 131/188 (69%), Gaps = 0/188 (0%)
 Frame = +3/-1

Query  138    PLADCKLALAMPHQLTRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGA  317
              P    K A AMPHQ TRFEP+L AGI+VE Q LSLC S* HL IQLD+ P +RKC EVGA
Sbjct  10785  PSLHSKFAFAMPHQRTRFEPELVAGIKVEGQRLSLC*S*FHLPIQLDEVPGDRKCGEVGA  10606

Query  318    PHRIRVTEKT*CLPEPSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVE  497
              P  I V++++*CLP+P   L E++I LV  K+G+E A+  IV Q PSI+A HHRRA+DVE
Sbjct  10605  PDNILVSKES*CLPKPPAHLTETYIFLVWWKIGDERAVRGIVGQRPSIKASHHRRAIDVE  10426

Query  498    VQQPVAHRPSFFVNIHRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVF  677
              VQ P     + FVNIHRL LTRL QG  L+*G L V  *LIA  ++ + +  KE T V F
Sbjct  10425  VQYPRVLATALFVNIHRLALTRLRQGGPLL*GALDVFL*LIAGRYVAYLKTGKEST*VKF  10246

Query  678    SHVNKVGN  701
               HV+KVGN
Sbjct  10245  RHVSKVGN  10222


 Score =  210 bits (626),  Expect = 2e-138
 Identities = 113/194 (58%), Positives = 125/194 (64%), Gaps = 0/194 (0%)
 Frame = -1/+3

Query  720    LWVQATCFLLC*HG*RRPVFSLFQAQSGGCDKQR*AS*THEERLK*A*TLDRAG*ESIDG  541
              L  +  CFLLC*HG   P+ SLFQ+       QR*A  TH ERLK A   D AG*  +DG
Sbjct  10203  LGARHYCFLLC*HGGI*PMCSLFQS*GRRRIVQR*AKETHPERLKGADPPDGAG*GPVDG  10382

Query  540    Y*RRRRVGGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA*CDSR*GQ*RA  361
               *RR R   P   VPLRRLPDDDA+LLWRV ALQ  ARR  HQ S +P  C SR*G   A
Sbjct  10383  C*RRGRSPRPWDTVPLRRLPDDDAMLLWRVFALQFHARRAHHQSSTIPERCKSR*GVQGA  10562

Query  360    QASIRFFRLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA*VRTW*  181
               A IR   +RG Y ERLLR  F P    QA  ADG NF+KGKVSD+RPLCQ PA  RTW 
Sbjct  10563  *AGIRILWIRGCYPERLLRRTFCPRVLRQAGWADGTNFNKGKVSDLRPLCQQPAQARTWC  10742

Query  180    VGEAWRVQVCNRLM  139
              VGEAWR+Q+ N +M
Sbjct  10743  VGEAWRMQIWNGVM  10784


 Score =  193 bits (576),  Expect = 1e-128
 Identities = 111/192 (57%), Positives = 129/192 (67%), Gaps = 0/192 (0%)
 Frame = -3/+2

Query  712    TSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*LDT*RTPQMSVNP*SSRVRINRWILT  533
              T  LFPTLLTW   T VLSF   +    + AMS* +T R PQ S  P* SRVR +RW+LT
Sbjct  10211  TPLLFPTLLTWRNLTYVLSFPVLR*ATYRPAMS*RNTSRAPQRSGPP*RSRVRASRWMLT  10390

Query  532    KKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGK  353
              K+      G CTSTS ARR*C A MEG C TI   A SSP F  T  M*+S+R   G G+
Sbjct  10391  KRAVAKTLGYCTSTSIARR*CDAFMEGLCPTIPRTARSSPIFHHTRKM*VSVRCAGGLGR  10570

Query  352    HQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPSLGSNLVSW*  173
              HQ    TR+L GAPTS HFLS G SSS M RW+*L+QRES+* ST MPA S GSNLV W*
Sbjct  10571  HQDSLDTRMLSGAPTSPHFLSPGTSSSWMGRWN*LQQRESL*PSTFMPATSSGSNLVRW*  10750

Query  172    GMASASLQSANG  137
              GMA+A+L+ ++G
Sbjct  10751  GMANANLEWSDG  10786


 Score =  193 bits (575),  Expect = 2e-123
 Identities = 97/161 (60%), Positives = 115/161 (71%), Gaps = 0/161 (0%)
 Frame = +2/-3

Query  140    ISRLQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRS  319
              I+  Q C RHASPTHQVR *AGCWH+GR S+TFPL KL PSAH A*   +G+K++RSRRS
Sbjct  10783  ITPFQICIRHASPTHQVRA*AGCWHKGRRSETFPLLKLVPSAHPA*RSTRGQKVRRSRRS  10604

Query  320    A*DPRNRKNLMLA*ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRG  499
               * PR ++ LM A*A   PHR+ H +G  E W*  R A NC+A+TLH+S ASSSG+RRRG
Sbjct  10603  G*HPRIQRILMPA*APCTPHRDLHLSGMVEDW**ARRAWNCRAKTLHKSIASSSGNRRRG  10424

Query  500    TAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
              T ++G     LRQ+PS   HPA S   A LRRS CV LAHR
Sbjct  10423  TVSQGLGDRPLRQHPSTGPHPAPSGGSAPLRRSGCVSLAHR  10301


 Score = 88.4 bits (257),  Expect = 2e-15
 Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 0/123 (0%)
 Frame = +1/+1

Query  2131  DLARENDQHVFVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLRVHNLAW  2310
             ++ R     VF+Y S  +++  ++ Q I    +AVLA  I PY S+L+LQEM R HN   
Sbjct  4708  EVLRSCRTKVFIYTSYRRLRHFVENQCIAQPGDAVLACMIPPYVSDLSLQEMSRAHNSFC  4887

Query  2311  PHSRTEEPDLECFIAIFASSLFIHLLELKVTNVYGREVACTFFLRRGTENRPYDVVACGT  2490
             P S T   D++CFIAI  SSLF+      V    G +  C FF R       YD+VA G+
Sbjct  4888  PGSHTSIADVQCFIAIQLSSLFVEEGTCDVHGRNGLKTTCRFFRRPAECFSRYDIVAIGS  5067

Query  2491  TQF  2499
               F
Sbjct  5068  VLF  5076


 Score = 65.6 bits (188),  Expect = 2e-138
 Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 0/69 (0%)
 Frame = -1/+1

Query  2043  VFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAPCWSEIYWLKSWKE*QFGI  1864
             VFLQI H   P FLE+ E FAI  AID K K D +E V L P + EI WLK+ KE*    
Sbjct  8881  VFLQIKHALGPPFLEIHESFAIDLAID*KCKLDLIEQVKLVPGFCEISWLKALKE**SRR  9060

Query  1863  HCDVSWIVT  1837
             HCDV   +T
Sbjct  9061  HCDVRLGIT  9087


 Score = 58.0 bits (165),  Expect = 0.0
 Identities = 26/39 (66%), Positives = 31/39 (79%), Gaps = 0/39 (0%)
 Frame = -3/+1

Query  1105  AVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSK  989
             A  +WCRQA*RG  ++KV PFRSINKGRRVRP +K K +
Sbjct  9838  ATPVWCRQA*RGAQVEKVVPFRSINKGRRVRP*LKEKER  9954


 Score = 52.3 bits (148),  Expect = 0.0
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
 Frame = +3/-2

Query  990   LLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSNTA  1106
             L F    GRTRLPLFMLRKG T S+  PR*AC H +  A
Sbjct  9953  LSFSFNYGRTRLPLFMLRKGTTFSTCAPR*ACLHHTGVA  9837


 Score = 49.4 bits (139),  Expect = 0.0
 Identities = 23/33 (69%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = -3/+1

Query  1822  QGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKI  1724
             Q HLKY  G W QS TVSGRESQR  GNNH +I
Sbjct  9106  QCHLKYAAGKWHQSATVSGRESQRQSGNNHHRI  9204


 Score = 46.4 bits (130),  Expect = 0.0
 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 0/41 (0%)
 Frame = +2/-1

Query  1715  LRIDLDVIVAKLPLAFPTRDCV*LAPVSDAVF*MALALAFF  1837
             +  D  VI+A+LPLAFPT +C *L P++  V *MAL L  F
Sbjct  9213  IDFDAMVIIARLPLAFPTGNCG*LMPLAGGVL*MALNLPLF  9091


 Score = 45.1 bits (126),  Expect = 1e-146
 Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +3/-2

Query  1734  *LLPNYLWLSRPETVSDWRQFPTPYFKW  1817
             *LLP+ LWLSRPETV+D    P  YFKW
Sbjct  9194  *LLPDCLWLSRPETVAD*CHLPAAYFKW  9111


 Score = 44.4 bits (124),  Expect = 2e-138
 Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 0/26 (0%)
 Frame = -2/+3

Query  1817  PFKIRRRKLAPIRHSLWSGKPEVVWQ  1740
             PFK+RRR++A I HS  SGKPE +WQ
Sbjct  9111  PFKVRRRQVASISHSFRSGKPEAIWQ  9188


 Score = 43.8 bits (122),  Expect = 1e-146
 Identities = 19/27 (70%), Positives = 21/27 (77%), Gaps = 0/27 (0%)
 Frame = +2/-1

Query  1013  THPPTFIYAAERRYFVKLNPTLGLSAP  1093
             +H PTFIYAA+R YF  L  TLGLSAP
Sbjct  9930  SHAPTFIYAAKRHYFFNLCTTLGLSAP  9850


 Score = 42.8 bits (119),  Expect = 2e-123
 Identities = 32/70 (45%), Positives = 39/70 (55%), Gaps = 0/70 (0%)
 Frame = +2/-2

Query  1838  VTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTIANPSCISRNDGL  2017
             V   LTSQ + + YSF+ FN  IS + G   T S  S+L   SIA +IA  S ISR  G 
Sbjct  9086  VIPNLTSQCLLDYYSFNAFNHEISQKPGTSLTCSMRSNLHF*SIAKSIAKLSWISRKGGP  8907

Query  2018  LQC*I*RKTL  2047
               C I RKT+
Sbjct  8906  KACLIWRKTV  8877


 Score = 42.8 bits (119),  Expect = 0.0
 Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 0/38 (0%)
 Frame = -1/+1

Query  1590  KDAHNWEEWGKA*SWPAIGFRESALANVKIAAFKILFL  1477
             KD  N E WG+A*S P IGFRES   N+ + A  +LF+
Sbjct  9340  KDT*NGEGWGRA*SLPNIGFRESCTGNLLMVALSMLFI  9453


 Score = 41.8 bits (116),  Expect = 2e-123
 Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
 Frame = +1/-3

Query  1015  APAYLYLCCGKALLCQAKPHVRPVGTKATQL  1107
             A AYLYLCC KALL Q   HVRPV T    L
Sbjct  9928  ARAYLYLCCEKALLFQPVHHVRPVCTTQVSL  9836


 Score = 40.4 bits (112),  Expect = 2e-123
 Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +1/-3

Query  1735  DCCQTTSGFPDQRLCLIGASFRRRILNG  1818
             D CQ  SGFPD++L LI A+ RRR LNG
Sbjct  9193  DYCQIASGFPDRKLWLIDATCRRRTLNG  9110


 Score = 38.8 bits (107),  Expect = 1.7
 Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 0/87 (0%)
 Frame = -2/-2

Query  2486  PQATTS*GRFSVPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQ  2307
             P AT S*       RRKK Q    P    T +     N+ L+ MA+KH  S   V L GQ
Sbjct  5063  PIATMS*RLKHSAGRRKKRQVVFNPFRPCTSHVPSSTNRLLSWMAIKHCTSAMLV*LPGQ  4884

Query  2306  ARL*TRSISWRASSLRYG*IVVASTAS  2226
               L  R IS    SL  G I+ A TAS
Sbjct  4883  KLLWARDISCSERSLT*GGIMQARTAS  4803


 Score = 37.5 bits (103),  Expect = 2e-138
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
 Frame = -2/+3

Query  1094  LVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKL  984
             +V TGLTW   *+SSAF QHK*R*A A+    K++ L
Sbjct  9849  VVQTGLTWCTG*KSSAFSQHK*R*ARATIIKGKRKML  9959


 Score = 36.5 bits (100),  Expect = 0.0
 Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 0/29 (0%)
 Frame = +3/-3

Query  1494  MQQSSRLPMRFREIQ*RANFKLYPTPPNY  1580
             +Q S+  P  F E Q  ANFKLYPTPP++
Sbjct  9436  VQPSTSCPCSFHESQYSANFKLYPTPPHF  9350


 Score = 35.2 bits (96),  Expect = 1e-146
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
 Frame = +1/-1

Query  1492  ECSNLHVCQCAFAKSNSGPTLSFTPLLPIMGIL  1590
             EC++  V + AF K+N   TLS TP LPI GI 
Sbjct  9438  ECNHQQVARAAFTKANIRQTLSSTPPLPISGIF  9340


 Score = 34.8 bits (95),  Expect = 2e-123
 Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
 Frame = +2/-2

Query  1484  SILNAAIFTFANALSRNPIAGQL*ALPHSSQLWASF  1591
             SI +A I      LSR PI G+L*ALPH S    SF
Sbjct  9446  SIESATINKLPVQLSRKPIFGKL*ALPHPSPFQVSF  9339


 Score = 34.8 bits (95),  Expect = 1e-128
 Identities = 19/26 (73%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
 Frame = -1/+2

Query  1092  GADRPNVGFSLTK*RLSAA*IKVGGC  1015
             GADRPNV   L K* L AA*IKVG C
Sbjct  9851  GADRPNVVHRLKK*CLFAA*IKVGAC  9928


 Score = 34.5 bits (94),  Expect = 2e-138
 Identities = 17/29 (58%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = -3/+3

Query  1573  GGVG*SLKLARYWISRKRIGKREDCCIQD  1487
             GGVG*SLK A YW+S K  G+  D C  D
Sbjct  9357  GGVG*SLKFAEYWLS*KLHGQLVDGCTLD  9443


 Score = 34.2 bits (93),  Expect = 1e-128
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 0/40 (0%)
 Frame = -2/+2

Query  1598  CQKRMPIIGRSGVKLKVGPLLDFAKAHWQT*RLLHSRYFF  1479
             C  ++P +GR GV+LKV  +L F KA   T   LHSR + 
Sbjct  9332  CI*KIPEMGRGGVELKVCRILAFVKAARATC*WLHSRCYL  9451


 Score = 33.2 bits (90),  Expect = 1e-128
 Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
 Frame = -1/+2

Query  1818  AI*NTASETGANQTQSLVGKARGSLATIT  1732
             AI*+T   +G NQ Q  VGKARG+LA IT
Sbjct  9110  AI*STPPASGINQPQFPVGKARGNLAIIT  9196


 Score = 30.5 bits (82),  Expect = 0.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = -1/+3

Query  996    KAKAEIP*TTNHHYWRTEPIPSR  928
              K K ++  T  HHYW  EPIP+R
Sbjct  9939   KGKRKMLLTM*HHYWTAEPIPTR  10007


 Score = 28.9 bits (77),  Expect = 2e-123
 Identities = 12/17 (70%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
 Frame = +2/-3

Query  653    KRENTGRLQPC*QSRKQ  703
              KRE+ G++ PC*QSRKQ
Sbjct  10270  KREHIGQIPPC*QSRKQ  10220


 Score = 28.2 bits (75),  Expect = 0.0
 Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
 Frame = +1/-2

Query  922    RPT*GNRFCPPIMVVCGLWNLSFCF  996
              + T GNRFC PIMV     +LSF F
Sbjct  10013  KSTSGNRFCCPIMVSHRQ*HLSFSF  9939


 Score = 27.2 bits (72),  Expect = 0.0
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
 Frame = +2/-2

Query  2630  KKPKADLNSPCRQPLSMSLS*VLC  2701
             +K    L  PCR PL++SL   LC
Sbjct  8297  RKKPRRLEVPCRPPLTISLVGFLC  8226


>gi|10567310|dbj|AP002086.1|  Agrobacterium rhizogenes plasmid pRi1724 DNA, complete sequence
Length=217594

 Features in this part of subject sequence:
   riorf173
   riorf15

 Score =  433 bits (1301),  Expect = 0.0
 Identities = 203/261 (77%), Positives = 228/261 (87%), Gaps = 0/261 (0%)
 Frame = +1/-3

Query  1852   HITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLD  2031
              HITM P+ LFL RFQP DLT AW+Q+NLF+ I+FAF IYS+ YSK L+ FQKRWA  VLD
Sbjct  19865  HITMAPRSLFLQRFQPRDLTKAWNQLNLFDEIQFAFLIYSQVYSKTLMDFQKRWAQGVLD  19686

Query  2032   LKENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQS  2211
              L+EN+PP+ ILKQLA LLKNKVCYHPPM V  PDLAREND+HVFVYLSREKMQKVL+E+S
Sbjct  19685  LEENAPPVVILKQLAHLLKNKVCYHPPMLVDHPDLARENDRHVFVYLSREKMQKVLEEKS  19506

Query  2212   ITFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLE  2391
              ITFG+EAVLATT+QPYRS+L LQEM+R HN+AWPH R EEPDLE FIAIFAS+LFIHLLE
Sbjct  19505  ITFGLEAVLATTMQPYRSDLVLQEMVRAHNIAWPHRRVEEPDLEGFIAIFASTLFIHLLE  19326

Query  2392   LKVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPEPDLTLRLS  2571
              LKVTNVYGREVACTFF+R+GT NR YDV+ACG TQFTKNA  + RPA  SPEPDLTLRLS
Sbjct  19325  LKVTNVYGREVACTFFVRQGTGNRSYDVIACGITQFTKNAGVMPRPAVPSPEPDLTLRLS  19146

Query  2572   GPDQEGEEGVMKPAAVNLKKE  2634
              GP+Q+ EEG MKPA VNLKKE
Sbjct  19145  GPNQKREEGDMKPAIVNLKKE  19083


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score =  335 bits (1006),  Expect = 0.0
 Identities = 185/261 (70%), Positives = 202/261 (77%), Gaps = 0/261 (0%)
 Frame = -2/+1

Query  2633   SFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFS  2454
              SFFRFT AGF++PSS    GPESRRVRSGSG+  AGR I  AFLVNCV+PQA TS* RF 
Sbjct  19084  SFFRFTIAGFISPSSRFWLGPESRRVRSGSGDGTAGRGITPAFLVNCVMPQAMTS*ERFP  19263

Query  2453   VPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWR  2274
              VP R KKVQATSLP T VTFNSS+*MNK LAKMA+K S+SGSS R CGQA L* R+ISWR
Sbjct  19264  VPCRTKKVQATSLPYTFVTFNSSR*MNKVLAKMAIKPSRSGSSTRRCGQAML*ARTISWR  19443

Query  2273   ASSLRYG*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWSFSRARSG*LTNIGG**QT  2094
                SLR G IVVASTAS PNVMD S STFCIFSR+R*TNTC SFS ARSG* T++GG** T
Sbjct  19444  TRSLR*GCIVVASTASNPNVMDFSSSTFCIFSRDR*TNTCRSFSLARSG*STSMGG**HT  19623

Query  2093   LFFKSSASCLSIYIGGEFSFKSSTARAHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHA  1914
              LFF+  ASCLS+  GG FS KSST  AH FWK  R LL*+ L*I KAN I SN+  W  A
Sbjct  19624  LFFRRWASCLSMTTGGAFSSKSSTPWAHLFWKSMRVLL*TWL*IKKANWISSNKLSWFQA  19803

Query  1913   GVRSTG*NRGRNSNLGSIVM*  1851
               VRS G* R RNS+ G+IVM*
Sbjct  19804  FVRSRG*KR*RNSDRGAIVM*  19866


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score =  318 bits (953),  Expect = 1e-147
 Identities = 165/269 (61%), Positives = 192/269 (71%), Gaps = 0/269 (0%)
 Frame = +3/-2

Query  1851   SHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*QTPPAFPETMGSCSAR  2030
              SHHNGS I IPST+ST+RSH S+EP   +R DPICF NL*P L*Q    FPE +G   A 
Sbjct  19866  SHHNGSSITIPSTLSTTRSHKSLEPA*LVR*DPICFFNL*PSL*QNSHGFPEKVGPRRA*  19687

Query  2031   FEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCICLSFSREDAESAEGTI  2210
              F GK S   +T*TT  + E+QS+LS S+ C S GS  RKRPTCICLS SREDAES  G I
Sbjct  19686  FGGKRSAGGHT*TTGPSSEKQSMLSPSHACRSPGSCQRKRPTCICLSISREDAESTGGKI  19507

Query  2211   HYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FRMLHRHFRKFLVHSLAG  2390
              H++W GGRAGD+D+T+S R RPPGD PCSQ CLAA P G T*   L+RHF K+LVHS AG
Sbjct  19506  HHVWIGGRAGDHDATLS*RPRPPGDGPCSQHCLAAPPRGRT*SGRLYRHFCKYLVHSPAG  19327

Query  2391   VKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATL  2570
              VKSD+ +R+ GSLHLL AAR  KP L*   LRHHT+HQKC RD T+G  +TGARP+PA L
Sbjct  19326  VKSDKCVRQGGSLHLLRAARHWKPLL*RHCLRHHTVHQKCWRDATTGGTVTGARPHPAAL  19147

Query  2571   GA*SGRRGGRHEACCSKPEERSLKPT*TP  2657
              G       G +EAC SK EER+L    +P
Sbjct  19146  GTQPET*RG*YEACYSKSEERNLGDLRSP  19060


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score =  312 bits (935),  Expect = 5e-143
 Identities = 162/267 (60%), Positives = 191/267 (71%), Gaps = 0/267 (0%)
 Frame = -1/+3

Query  2637   GFFLQVYCSRLHDALLAFLIRPRESQG*VWLR*GGGRT*YPEGIFGELCGAASYNIIGAV  2458
              GFFLQ+Y SRLH  L  FL+  RE QG VWLR*   R+ +   IFGELC AAS ++IGAV
Sbjct  19080  GFFLQIYYSRLHITLFTFLVGSREPQGEVWLR*RYRRSWHHASIFGELCDAASNDVIGAV  19259

Query  2457   FSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGDEAF*IRFLRAAVRPSKVVNTEHLL  2278
               S  P +EGA YL  V++ HF*LQQVNEQGTC+NGD+AF IRF  AAVRPS VV+T+HLL
Sbjct  19260  SSALPHEEGAGYLPAVHICHF*LQQVNEQGTCKNGDKAFQIRFFHAAVRPSNVVSTDHLL  19439

Query  2277   EGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARKIDKYMLVVFSSQIRLTNKHRRMIA  2098
              E E+A I L+R RQHGL SK +G FLQ+FLHLLAR IDKYM VVFS +IR+ +KH R+I 
Sbjct  19440  EDEVATIGLHRGRQHGLQSKRDGFFLQYFLHLLAR*IDKYMSVVFSGKIRVIDKHGRVIT  19619

Query  2097   DFVLQELS*LFKYIYRWRVFLQI*HCKSPSFLEMQEGFAIVTAIDCKSKSDPLE*VYLAP  1918
               FV Q++  LFKY +R  VFLQI H   P FLE+ E FAI  AID KSK D +E V L P
Sbjct  19620  YFVFQKMGQLFKYDHRRSVFLQIKHALGPPFLEIHESFAIDLAID*KSKLDLIEQVKLVP  19799

Query  1917   CWSEIYWLKSWKE*QFGIHCDVSWIVT  1837
               + EI WLK+ KE*    HCDV   +T
Sbjct  19800  GFCEISWLKALKE**SRSHCDVRLGIT  19880


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score =  298 bits (892),  Expect = 2e-130
 Identities = 162/264 (61%), Positives = 173/264 (65%), Gaps = 0/264 (0%)
 Frame = -3/+2

Query  2638   RLLSSGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGG  2459
              R LSS LL QAS  P  +    PR AG GLAPV   P V SR HFW* V CRK   HR G
Sbjct  19079  RFLSSDLL*QASYHPLHVSGWVPRAAG*GLAPVTVPPVVASRQHFW*TV*CRKQ*RHRSG  19258

Query  2458   FQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASP  2279
              FQ LAA RRC+LP  R   SLLTPA E*TR L+KWR*S+ +QV P G AAKQ CEHG SP
Sbjct  19259  FQCLAARRRCRLPPCRTHLSLLTPAGE*TRYLQKWR*SLPDQVLPRGGAAKQCCEHGPSP  19438

Query  2278   GGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVGRFLEPDPAD*QT*EDDS  2099
              GGR R D V S SPARPP Q *WI P  LSASSRE DRQIHVGRFL  DP D Q  E D+
Sbjct  19439  GGRGRYDRVASWSPARPPIQT*WIFPPVLSASSREIDRQIHVGRFLWQDPGDRQAWEGDN  19618

Query  2098   RLCSSRAQLVV*VYISVESFPSNLALQEPIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGS  1919
               LC S    VV*V    E FP N A   P  SGN    CY  GYRL+KQIGS R   +GS
Sbjct  19619  ILCFSEDGPVV*V*PPAERFPPNQARLGPTFSGNP*EFCYRLGYRLKKQIGSHRTS*AGS  19798

Query  1918   MLE*DLLVEIVEGIAIWDPL*CEL  1847
               L *DL+VE VEGI I +PL*CE+
Sbjct  19799  RLL*DLVVESVEGIVIEEPL*CEV  19870


 Features in this part of subject sequence:
   riorf173
   riorf16

 Score =  296 bits (888),  Expect = 0.0
 Identities = 140/188 (74%), Positives = 154/188 (81%), Gaps = 0/188 (0%)
 Frame = -2/+1

Query  701    VSYFVNMAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGG  522
              +SYF NMAE DLC+LF  LKV DV+SSDEL +H+++AS ER PL EPGE QSMDIDEEGG
Sbjct  20998  ISYFANMAEFDLCALFSSLKVGDVSSSDELKKHIQSASKERTPLTEPGEGQSMDIDEEGG  21177

Query  521    SVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGF  342
                  G+LYLYVDCPTMM CFYGGSLPYN   GAL+TNLPPYQ DV+L EV RGLRQASGF
Sbjct  21178  RQDPGILYLYVDCPTMMRCFYGGSLPYNSRHGALITNLPPYQKDVSLGEVCRGLRQASGF  21357

Query  341    FGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGE  162
              FGY D +RSAYFAA S PG  +KL+ QMELTSTKGK LTFDLYAS QLR EPG LVRHGE
Sbjct  21358  FGYEDVIRSAYFAALSVPGYFVKLDGQMELTSTKGKSLTFDLYASNQLRLEPGALVRHGE  21537

Query  161    CKFAIG*W  138
              CKF + *W
Sbjct  21538  CKFGME*W  21561


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score =  276 bits (827),  Expect = 2e-130
 Identities = 158/268 (58%), Positives = 179/268 (66%), Gaps = 0/268 (0%)
 Frame = +2/-1

Query  1838   VTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTIANPSCISRNDGL  2017
              V   LTSQW+ + YSF+ FN  IS + G   T S  S+LL  SIA +IA  S ISR  G 
Sbjct  19879  VIPNLTSQWLLDHYSFNAFNHEISQKPGTSLTCSMRSNLLF*SIAKSIAKLSWISRKGGP  19700

Query  2018   LQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMYLSIFLARRCRKC  2197
                C I RKTL R+ YLNN    *+TK  I L CL ++RI  EKTT+MYLSI+LARRCRK 
Sbjct  19699  KACLIWRKTLRRWSYLNNWPIF*KTKYVITLPCLSITRILPEKTTDMYLSIYLARRCRKY  19520

Query  2198   *RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*NASSPFSQVPCS  2377
               R NP  L+WRPCWR R N I A+S SRR SV TTLLGRTAA +NLI  A SPF QVPCS
Sbjct  19519  WRKNPSRLDWRPCWRPRCNPIVATSSSRRWSVLTTLLGRTAAWKNLIWKALSPFLQVPCS  19340

Query  2378   FTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*  2557
              FTCWS*K*   T  R* APS CG+ L+TAPM   LAA H+SPKM +  H R   HRSQT 
Sbjct  19339  FTCWS*K*QMCTAGR*PAPSSCGKALETAPMTSLLAASHSSPKMLA*CHDRRYRHRSQTS  19160

Query  2558   PCDSRGLIRKARRAS*SLLQ*T*RKKPK  2641
              PC SR   R  +R  *SLL * *RKKP+
Sbjct  19159  PCGSRDPTRNVKRVI*SLL**I*RKKPR  19076


 Features in this part of subject sequence:
   riorf173
   riorf16

 Score =  265 bits (792),  Expect = 0.0
 Identities = 138/190 (72%), Positives = 152/190 (80%), Gaps = 0/190 (0%)
 Frame = +1/-3

Query  130    STNH*PIANLHSPCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK  309
              S  H  I NLHSPCLTN+PGS+LSW+LA*RS VR FPFVEVSSIC  SL   PG E+AAK
Sbjct  21569  SYCHHSIPNLHSPCLTNAPGSSLSWLLA*RSKVRDFPFVEVSSICPSSLTKYPGTESAAK  21390

Query  310    *ALRIGSA*PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQS  489
              *ALRI S+ PK PDACLSPL TS R+TS WYGGRLV SAPC++L*GKDPP*K  IIVGQS
Sbjct  21389  *ALRITSSYPKNPDACLSPLHTSPRLTSFWYGGRLVMSAPCLEL*GKDPP*KHRIIVGQS  21210

Query  490    T*RYSSPWPTDPPSSSISID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHR  669
              T*RYS P    PPSSSISID  SPGS++G+RSFEA +MC  SSSL  TS TL L+KR HR
Sbjct  21209  T*RYSIPGSWRPPSSSISIDWPSPGSVRGVRSFEALWMCFFSSSLDDTSPTLRLEKRAHR  21030

Query  670    SSSAMLTK*E  699
              S+SAML K*E
Sbjct  21029  SNSAMLAK*E  21000


 Features in this part of subject sequence:
   riorf173
   riorf16

 Score =  215 bits (641),  Expect = 1e-147
 Identities = 111/188 (59%), Positives = 133/188 (70%), Gaps = 0/188 (0%)
 Frame = +3/-2

Query  138    PLADCKLALAMPHQLTRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGA  317
              P    K A AMPHQ TRFEP+L AGI+VE Q LSLC S*LHL IQLD+ P +RKC EVGA
Sbjct  21561  PSLHSKFAFAMPHQRTRFEPELVAGIKVEGQRLSLC*S*LHLPIQLDEVPGDRKCGEVGA  21382

Query  318    PHRIRVTEKT*CLPEPSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVE  497
              P  I V++++*CLP+P   L E++I LVR K+G+E A+  IV Q PSI+A HHRRAVDVE
Sbjct  21381  PDNILVSKES*CLPKPPAHLTETYIFLVRWKIGDERAVPGIVGQRPSIKASHHRRAVDVE  21202

Query  498    VQQPVAHRPSFFVNIHRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVF  677
              VQ P     + FVNIHRL LTRL QG  L+*G L V  *LIA  ++ + +  KE T V F
Sbjct  21201  VQYPRVLATALFVNIHRLALTRLRQGGPLL*GALDVFL*LIAGRYVAYLKTGKEST*VKF  21022

Query  678    SHVNKVGN  701
               HV+KVGN
Sbjct  21021  RHVSKVGN  20998


 Features in this part of subject sequence:
   riorf173
   riorf16

 Score =  211 bits (631),  Expect = 5e-143
 Identities = 114/187 (60%), Positives = 124/187 (66%), Gaps = 0/187 (0%)
 Frame = -1/+3

Query  699    FLLC*HG*RRPVFSLFQAQSGGCDKQR*AS*THEERLK*A*TLDRAG*ESIDGY*RRRRV  520
              FLLC*HG   P+ SLFQ+       QR*A  TH ERLK A   D AG*  +DGY*RR R 
Sbjct  21000  FLLC*HGGI*PMCSLFQS*GRRRIVQR*AKETHPERLKGADPPDGAG*GPVDGY*RRGRS  21179

Query  519    GGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA*CDSR*GQ*RAQASIRFF  340
                P   VPLRRLPDDDA+LLWRV ALQ  ARR  HQ S VP  C SR*G   A A IR  
Sbjct  21180  PRPWDTVPLRRLPDDDAMLLWRVFALQFQARRAHHQSSTVPERCKSR*GVQGA*AGIRIL  21359

Query  339    RLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA*VRTW*VGEAWRV  160
               +RG Y ERLLR  F P    QA  ADGANF+KGKVSD+RPLCQ PA  RTW VGEAWR+
Sbjct  21360  WIRGCYPERLLRRTFCPRVLRQAGWADGANFNKGKVSDLRPLCQQPAQARTWCVGEAWRM  21539

Query  159    QVCNRLM  139
              Q+ N +M
Sbjct  21540  QIWNGVM  21560


 Features in this part of subject sequence:
   riorf173
   riorf16

 Score =  200 bits (595),  Expect = 2e-130
 Identities = 115/192 (59%), Positives = 131/192 (68%), Gaps = 0/192 (0%)
 Frame = -3/+2

Query  712    TSNLFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*LDT*RTPQMSVNP*SSRVRINRWILT  533
              T  LFPTLLTW   T VLSF   +    + AMS* +T R PQ S  P* SRVR +RWILT
Sbjct  20987  TPLLFPTLLTWRNLTYVLSFPVLR*ATYRPAMS*RNTSRAPQRSGPP*RSRVRASRWILT  21166

Query  532    KKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGK  353
              K+      G CTSTSTARR*C A MEG C TI   A SSP F RT  M*+S+R   G G+
Sbjct  21167  KRAVAKTLGYCTSTSTARR*CDAFMEGLCPTIPGTARSSPIFHRTRKM*VSVRCAGGLGR  21346

Query  352    HQVFSVTRILCGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPSLGSNLVSW*  173
              HQ    TR+L GAPTS HFLS G SSS M RWS*L+QRES+* ST MPA S GSNLV W*
Sbjct  21347  HQDSLDTRMLSGAPTSPHFLSPGTSSSWMGRWS*LQQRESL*PSTFMPATSSGSNLVRW*  21526

Query  172    GMASASLQSANG  137
              GMA+A+L+ ++G
Sbjct  21527  GMANANLEWSDG  21562


 Features in this part of subject sequence:
   riorf173
   riorf16

 Score =  200 bits (595),  Expect = 2e-130
 Identities = 101/161 (62%), Positives = 117/161 (72%), Gaps = 0/161 (0%)
 Frame = +2/-1

Query  140    ISRLQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRS  319
              I+  Q C RHASPTHQVR *AGCWH+GR S+TFPL KLAPSAH A*   +G+K++RSRRS
Sbjct  21559  ITPFQICIRHASPTHQVRA*AGCWHKGRRSETFPLLKLAPSAHPA*RSTRGQKVRRSRRS  21380

Query  320    A*DPRNRKNLMLA*ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRG  499
               * PR ++ LM A*A   PHR+ H +GT E W*  R A NC+A+TLH+S ASSSGSRRRG
Sbjct  21379  G*HPRIQRILMPA*APCTPHRDLHLSGTVEDW**ARRAWNCRAKTLHKSIASSSGSRRRG  21200

Query  500    TAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
              T ++G     LRQYPS   HPA S   A LRRS CV LAHR
Sbjct  21199  TVSQGLGDRPLRQYPSTGPHPAPSGGSAPLRRSGCVSLAHR  21077


 Features in this part of subject sequence:
   riorf173
   riorf13

 Score = 88.4 bits (257),  Expect = 2e-15
 Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 0/123 (0%)
 Frame = +1/+1

Query  2131   DLARENDQHVFVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLRVHNLAW  2310
              ++ R     VF+Y S  +++  ++ Q I    +AVLA  I PY S+L+LQEM R HN   
Sbjct  15502  EVLRPCRTKVFIYTSYRRLRHFVENQCIAQPGDAVLACMIPPYVSDLSLQEMSRAHNSFC  15681

Query  2311   PHSRTEEPDLECFIAIFASSLFIHLLELKVTNVYGREVACTFFLRRGTENRPYDVVACGT  2490
              P S T   D++CFIAI  SSLF+      V    G +  C FF R       YD+VA G+
Sbjct  15682  PGSHTSIADVQCFIAIQLSSLFVEEGTCDVHGRNGLKTTCRFFRRPAECFSRYDIVAIGS  15861

Query  2491   TQF  2499
                F
Sbjct  15862  VLF  15870


 Features in this part of subject sequence:
   riorf173

 Score = 57.0 bits (162),  Expect = 0.0
 Identities = 25/39 (64%), Positives = 31/39 (79%), Gaps = 0/39 (0%)
 Frame = -3/+1

Query  1105   AVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSK  989
              A  +WCRQA*RG  ++KV PFR+INKGRRVRP +K K +
Sbjct  20614  ATPVWCRQA*RGAQVEKVVPFRNINKGRRVRP*LKEKER  20730


 Features in this part of subject sequence:
   riorf173

 Score = 52.3 bits (148),  Expect = 0.0
 Identities = 24/39 (61%), Positives = 26/39 (66%), Gaps = 0/39 (0%)
 Frame = +3/-3

Query  990    LLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSNTA  1106
              L F    GRTRLPLFMLRKG T S+  PR*AC H +  A
Sbjct  20729  LSFSFNYGRTRLPLFMLRKGTTFSTCAPR*ACLHHTGVA  20613


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score = 49.4 bits (139),  Expect = 0.0
 Identities = 19/26 (73%), Positives = 23/26 (88%), Gaps = 0/26 (0%)
 Frame = -2/+2

Query  1817   PFKIRRRKLAPIRHSLWSGKPEVVWQ  1740
              PFK+ RR++APIRHSL SGKPE +WQ
Sbjct  19904  PFKVHRRQVAPIRHSLRSGKPEAIWQ  19981


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score = 48.4 bits (136),  Expect = 0.0
 Identities = 19/28 (67%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
 Frame = +3/-1

Query  1734   *LLPNYLWLSRPETVSDWRQFPTPYFKW  1817
              *LLP+ LWLSRPETV DW   P  +FKW
Sbjct  19987  *LLPDCLWLSRPETVPDWCHLPAVHFKW  19904


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score = 47.7 bits (134),  Expect = 1e-147
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 0/41 (0%)
 Frame = +2/-3

Query  1715   LRIDLDVIVAKLPLAFPTRDCV*LAPVSDAVF*MALALAFF  1837
              +  D  VI+A+LPLAFPT DC *L P++    *MAL L  F
Sbjct  20006  IDFDAMVIIARLPLAFPTGDCA*LVPLAGGAL*MALNLPLF  19884


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score = 46.7 bits (131),  Expect = 2e-130
 Identities = 20/28 (71%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
 Frame = +1/-2

Query  1735   DCCQTTSGFPDQRLCLIGASFRRRILNG  1818
              D CQ  SGFPD+RLCLIGA+ RR  LNG
Sbjct  19986  DYCQIASGFPDRRLCLIGATCRRCTLNG  19903


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score = 45.7 bits (128),  Expect = 5e-143
 Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 0/40 (0%)
 Frame = -3/+3

Query  1843   SYEKGKCQGHLKYGVGNWRQSDTVSGRESQR*FGNNHIKI  1724
              + E  + Q HLK   G W QS TVSGRESQR  GNNH +I
Sbjct  19878  TME*RQVQCHLKCTAGKWHQSGTVSGRESQRQSGNNHHRI  19997


 Features in this part of subject sequence:
   riorf173

 Score = 42.1 bits (117),  Expect = 1e-147
 Identities = 18/27 (66%), Positives = 20/27 (74%), Gaps = 0/27 (0%)
 Frame = +2/-2

Query  1013   THPPTFIYAAERRYFVKLNPTLGLSAP  1093
              +H PTFIY A+R YF  L  TLGLSAP
Sbjct  20706  SHAPTFIYVAKRHYFFNLCTTLGLSAP  20626


 Features in this part of subject sequence:
   riorf173

 Score = 41.8 bits (116),  Expect = 2e-130
 Identities = 20/31 (64%), Positives = 20/31 (64%), Gaps = 0/31 (0%)
 Frame = +1/-1

Query  1015   APAYLYLCCGKALLCQAKPHVRPVGTKATQL  1107
              A AYLYLCC KALL Q   HVRPV T    L
Sbjct  20704  ARAYLYLCCEKALLFQPVHHVRPVCTTQVSL  20612


 Features in this part of subject sequence:
   riorf173
   riorf13

 Score = 38.8 bits (107),  Expect = 1.7
 Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 0/87 (0%)
 Frame = -2/-3

Query  2486   PQATTS*GRFSVPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQ  2307
              P AT S*       RRKK Q    P    T +     N+ L+ MA+KH  S   V L GQ
Sbjct  15857  PIATMS*RLKHSAGRRKKRQVVFNPFRPCTSHVPSSTNRLLSWMAIKHCTSAMLV*LPGQ  15678

Query  2306   ARL*TRSISWRASSLRYG*IVVASTAS  2226
                L  R IS    SL  G I+ A TAS
Sbjct  15677  KLLWARDISCSERSLT*GGIMQARTAS  15597


 Features in this part of subject sequence:
   riorf173

 Score = 37.8 bits (104),  Expect = 0.0
 Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 0/33 (0%)
 Frame = -1/+3

Query  1686   SENTACVIVHGFIVLGLLFLVVLFGLSERMSKK  1588
              ++N A +I H  IV+GL FL  LFG SE MSK+
Sbjct  20040  AKNNARLIGHEVIVVGLAFLFFLFGFSESMSKR  20138


 Features in this part of subject sequence:
   riorf173

 Score = 37.5 bits (103),  Expect = 5e-143
 Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
 Frame = -2/+3

Query  1094   LVPTGLTWGLA*QSSAFPQHK*R*AGASHY*RKKQKL  984
              +V TGLTW   *+SSAF QHK*R*A A+    K++ L
Sbjct  20625  VVQTGLTWCTG*KSSAFSQHK*R*ARATIIKGKRKML  20735


 Features in this part of subject sequence:
   riorf173

 Score = 35.2 bits (96),  Expect = 0.0
 Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 0/31 (0%)
 Frame = +2/-1

Query  1589   FFDILSLRPNNTTRKSKPSTMNP*TITHAVF  1681
                DILSL+PN   +K++P+TM  * I  A+F
Sbjct  20137  LLDILSLKPNKKNKKARPTTMTS*PIKRALF  20045


 Features in this part of subject sequence:
   riorf173

 Score = 34.8 bits (95),  Expect = 0.0
 Identities = 13/15 (86%), Positives = 14/15 (93%), Gaps = 0/15 (0%)
 Frame = -1/+3

Query  1566   WGKA*SWPAIGFRES  1522
              WG+A*SWP IGFRES
Sbjct  20157  WGRA*SWPNIGFRES  20201


 Features in this part of subject sequence:
   riorf173
   riorf15

 Score = 34.2 bits (93),  Expect = 2e-130
 Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 0/29 (0%)
 Frame = -1/+1

Query  1818   AI*NTASETGANQTQSLVGKARGSLATIT  1732
              AI*+    +G NQ QS VGKARG+LA IT
Sbjct  19903  AI*SAPPASGTNQAQSPVGKARGNLAIIT  19989


 Features in this part of subject sequence:
   riorf173

 Score = 33.2 bits (90),  Expect = 2e-130
 Identities = 18/26 (69%), Positives = 18/26 (69%), Gaps = 0/26 (0%)
 Frame = -1/+2

Query  1092   GADRPNVGFSLTK*RLSAA*IKVGGC  1015
              GADRPNV   L K* L A *IKVG C
Sbjct  20627  GADRPNVVHRLKK*CLFAT*IKVGAC  20704


 Features in this part of subject sequence:
   riorf173

 Score = 31.5 bits (85),  Expect = 0.0
 Identities = 15/19 (78%), Positives = 15/19 (78%), Gaps = 0/19 (0%)
 Frame = +2/-1

Query  1511   FANALSRNPIAGQL*ALPH  1567
              F   LSRNPI GQL*ALPH
Sbjct  20212  FPVQLSRNPIFGQL*ALPH  20156


 Features in this part of subject sequence:
   riorf173

 Score = 30.5 bits (82),  Expect = 0.0
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = -1/+3

Query  996    KAKAEIP*TTNHHYWRTEPIPSR  928
              K K ++  T  HHYW  EPIP+R
Sbjct  20715  KGKRKMLLTM*HHYWTAEPIPTR  20783


 Features in this part of subject sequence:
   riorf173

 Score = 27.2 bits (72),  Expect = 0.018
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 0/33 (0%)
 Frame = +3/-2

Query  1590   FLTSFR*GQTTRQEKANPVL*THERSRMQYFRL  1688
              F T F * QT + +K  P+L*  ++S   YF L
Sbjct  20136  F*TYFH*SQTKKTKKLGPLL*PRDQSSGHYFSL  20038


 Features in this part of subject sequence:
   riorf173

 Score = 26.2 bits (69),  Expect = 0.018
 Identities = 12/19 (63%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
 Frame = +3/-2

Query  1512   LPMRFREIQ*RANFKLYPT  1568
               P  F EI   ANFKLYPT
Sbjct  20211  FPCSFHEILYSANFKLYPT  20155


 Features in this part of subject sequence:
   riorf173

 Score = 25.6 bits (67),  Expect = 1.0
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 0/31 (0%)
 Frame = -2/+1

Query  1682   KILHA*SFMGS*YWVCFFLSCCLALAKGCQK  1590
              KI+ A*    S* W   F   CLAL K C K
Sbjct  20044  KIMPA*LVTRS**WA*LFCFFCLALVKVCLK  20136


 Features in this part of subject sequence:
   riorf173

 Score = 24.9 bits (65),  Expect = 0.018
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 0/30 (0%)
 Frame = +3/-3

Query  1680   FRLIQILRPPVSCASILM*LLPNYLWLSRP  1769
              FRLIQ+LRPP         ++   L L+ P
Sbjct  20045  FRLIQVLRPPCPSIDFDAMVIIARLPLAFP  19956


 Features in this part of subject sequence:
   riorf173

 Score = 23.3 bits (60),  Expect = 1.0
 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -3/+1

Query  1708   GGLKIWIKRK  1679
              GGLK WIKRK
Sbjct  20017  GGLKTWIKRK  20046


 Features in this part of subject sequence:
   riorf173

 Score = 22.9 bits (59),  Expect = 1.0
 Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 0/19 (0%)
 Frame = -3/+2

Query  1567   VG*SLKLARYWISRKRIGK  1511
              VG*SLKLA Y IS K  GK
Sbjct  20156  VG*SLKLAEYRIS*KLHGK  20212


>gi|73810201|gb|DQ160187.1|  Agrobacterium rhizogenes strain A4 plasmid pRi rolC gene, promoter 
region
Length=928

 Score =  428 bits (1285),  Expect = 2e-158
 Identities = 205/224 (91%), Positives = 206/224 (91%), Gaps = 0/224 (0%)
 Frame = +1/-2

Query  922   RPT*GNRFCPPIMVVCGLWNLSFCFFL**WDAPAYLYLCCGKALLCQAKPHVRPVGTKAT  1101
             RPT*GNRFCPPIMVVCGLWNLSFCFFL**WDAPAYLYLCCGKALLCQAKPHVRPVGTKAT
Sbjct  690   RPT*GNRFCPPIMVVCGLWNLSFCFFL**WDAPAYLYLCCGKALLCQAKPHVRPVGTKAT  511

Query  1102  QLAIYYRVS*KHVHGHHSFLG*LLFALLIYFLLNSETEIIVLHPLN*CKFGIYL*QVLQN  1281
             QLAIYYRVS*KHVHGHHSFLG*LLFALLIYFLLNSETEIIVLHPLN*CKFGIYL*QVLQN
Sbjct  510   QLAIYYRVS*KHVHGHHSFLG*LLFALLIYFLLNSETEIIVLHPLN*CKFGIYL*QVLQN  331

Query  1282  HVFPFGIIYSTR*SLKRIPD*KRLTHIIIAIINTSFWHR*FPHYITYTMLVINMIVAILY  1461
             HVFPFGIIYSTR*SLKRIPD*KRLTHIIIAIINTSFWHR*FPHYITYTMLVINMIVAILY
Sbjct  330   HVFPFGIIYSTR*SLKRIPD*KRLTHIIIAIINTSFWHR*FPHYITYTMLVINMIVAILY  151

Query  1462  ILTRK*KKYLECSNLHVCQCAFAKSNSGPTLSFTPLLPIMGILF  1593
             ILTRK*KKYLECSNLHVCQC F +          P  P  G  F
Sbjct  150   ILTRK*KKYLECSNLHVCQCRFREIQ*RANFKLYPTPPNYGHPF  19


 Score =  417 bits (1254),  Expect = 6e-153
 Identities = 208/229 (90%), Positives = 211/229 (92%), Gaps = 0/229 (0%)
 Frame = -2/+2

Query  1604  KGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQT*RLLHSRYFFYFLVKM*SIATIILITNI  1425
             K  +K  P +G  G  LK+       K HWQT RLLHSRYFFYFLVKM*SIATIILITNI
Sbjct  8     KDVKKGCP*LGGVG*SLKLARYWISRKRHWQTWRLLHSRYFFYFLVKM*SIATIILITNI  187

Query  1424  VYVI*CGNYLCQNDVLIIAIIICVNLFQSGIRLSDYRVE*IIPKGNTWFWRTCYRYMPNL  1245
             VYVI*CGNYLCQNDVLIIAIIICVNLFQSGIRLSDYRVE*IIPKGNTWFWRTCYRYMPNL
Sbjct  188   VYVI*CGNYLCQNDVLIIAIIICVNLFQSGIRLSDYRVE*IIPKGNTWFWRTCYRYMPNL  367

Query  1244  H*FSGCKTIISVSEFNKK*ISRANSS*PKKEWWPCTCF*ETL**IASCVALVPTGLTWGL  1065
             H*FSGCKTIISVSEFNKK*ISRANSS*PKKEWWPCTCF*ETL**IASCVALVPTGLTWGL
Sbjct  368   H*FSGCKTIISVSEFNKK*ISRANSS*PKKEWWPCTCF*ETL**IASCVALVPTGLTWGL  547

Query  1064  A*QSSAFPQHK*R*AGASHY*RKKQKLRFHRPQTTIIGGQNLFPHVGR*  918
             A*QSSAFPQHK*R*AGASHY*RKKQKLRFHRPQTTIIGGQNLFPHVGR*
Sbjct  548   A*QSSAFPQHK*R*AGASHY*RKKQKLRFHRPQTTIIGGQNLFPHVGR*  694


 Score =  415 bits (1247),  Expect = 4e-126
 Identities = 205/218 (94%), Positives = 207/218 (94%), Gaps = 0/218 (0%)
 Frame = +2/-3

Query  869   KGHLPAFNCFYLLGLKLSDPREGIGSVLQ*WWFVVYGISAFAFSFNNGTHPPTFIYAAER  1048
             +G    F  F L+  K SDPREGIGSVLQ*WWFVVYGISAFAFSFNNGTHPPTFIYAAER
Sbjct  743   EGTPACF*LFLLIRFKASDPREGIGSVLQ*WWFVVYGISAFAFSFNNGTHPPTFIYAAER  564

Query  1049  RYFVKLNPTLGLSAPKQHSWQFIIGSLKSTYMATIPS*ANCYSPCLFIFY*TQKQR**FC  1228
             RYFVKLNPTLGLSAPKQHSWQFIIGSLKSTYMATIPS*ANCYSPCLFIFY*TQKQR**FC
Sbjct  563   RYFVKLNPTLGLSAPKQHSWQFIIGSLKSTYMATIPS*ANCYSPCLFIFY*TQKQR**FC  384

Query  1229  TH*TSVNLAYIYSRFSKTMYFLLE*FIQHDNRLNVFPIEKD*HILLLLLLIHHFGIDNFR  1408
             TH*TSVNLAYIYSRFSKTMYFLLE*FIQHDNRLNVFPIEKD*HILLLLLLIHHFGIDNFR
Sbjct  383   TH*TSVNLAYIYSRFSKTMYFLLE*FIQHDNRLNVFPIEKD*HILLLLLLIHHFGIDNFR  204

Query  1409  TILHIQC**LI*LWQYFTS*PENRKSILNAAIFTFANA  1522
             TILHIQC**LI*LWQYFTS*PENRKSILNAAI TFANA
Sbjct  203   TILHIQC**LI*LWQYFTS*PENRKSILNAAISTFANA  90


 Score =  408 bits (1225),  Expect = 3e-167
 Identities = 202/211 (95%), Positives = 207/211 (98%), Gaps = 0/211 (0%)
 Frame = -1/+1

Query  1545  PAIGFRESALANVKIAAFKILFLFSG*DVKYCHNHINY*HCICNIVRKLSMPK*CINNSN  1366
             P + F ++ALANV+IAAFKILFLFSG*DVKYCHNHINY*HCICNIVRKLSMPK*CINNSN
Sbjct  67    PLLDFAKAALANVEIAAFKILFLFSG*DVKYCHNHINY*HCICNIVRKLSMPK*CINNSN  246

Query  1365  NNMC*SFSIGNTFKRLSC*INYSKRKYMVLENLL*IYAKFTLV*WVQNYYLCF*V**KIN  1186
             NNMC*SFSIGNTFKRLSC*INYSKRKYMVLENLL*IYAKFTLV*WVQNYYLCF*V**KIN
Sbjct  247   NNMC*SFSIGNTFKRLSC*INYSKRKYMVLENLL*IYAKFTLV*WVQNYYLCF*V**KIN  426

Query  1185  KQGE*QLA*EGMVAMYVLLRDPIINCQLCCFGADRPNVGFSLTK*RLSAA*IKVGGCVPL  1006
             KQGE*QLA*EGMVAMYVLLRDPIINCQLCCFGADRPNVGFSLTK*RLSAA*IKVGGCVPL
Sbjct  427   KQGE*QLA*EGMVAMYVLLRDPIINCQLCCFGADRPNVGFSLTK*RLSAA*IKVGGCVPL  606

Query  1005  LKEKAKAEIP*TTNHHYWRTEPIPSRGSLSF  913
             LKEKAKAEIP*TTNHHYWRTEPIPSRGSL+ 
Sbjct  607   LKEKAKAEIP*TTNHHYWRTEPIPSRGSLAL  699


 Score =  399 bits (1199),  Expect = 6e-165
 Identities = 199/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
 Frame = +3/-1

Query  921   ATHVRE*VLSSNNGGLWSMESQLLLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSN  1100
             ATHVRE*VLSSNNGGLWSMESQLLLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSN
Sbjct  691   ATHVRE*VLSSNNGGLWSMESQLLLFPLIMGRTRLPLFMLRKGATLSS*TPR*ACRHQSN  512

Query  1101  TAGNLL*GLLKARTWPPFLLRLTAIRPAYLFFIKLRNRDNSFAPTKLV*IWHISIAGSPK  1280
             TAGNLL*GLLKARTWPPFLLRLTAIRPAYLFFIKLRNRDNSFAPTKLV*IWHISIAGSPK
Sbjct  511   TAGNLL*GLLKARTWPPFLLRLTAIRPAYLFFIKLRNRDNSFAPTKLV*IWHISIAGSPK  332

Query  1281  PCISFWNNLFNTIIA*TYSRLKKINTYYYCYY*YIILA*IISALYYIYNVSN*YDCGNTL  1460
             PCISFWNNLFNTIIA*TYSRLKKINTYYYCYY*YIILA*IISALYYIYNVSN*YDCGNTL
Sbjct  331   PCISFWNNLFNTIIA*TYSRLKKINTYYYCYY*YIILA*IISALYYIYNVSN*YDCGNTL  152

Query  1461  HLNQKIEKVS*MQQSSRLPM  1520
             HLNQKIEKVS*MQQS RLPM
Sbjct  151   HLNQKIEKVS*MQQSPRLPM  92


 Score =  395 bits (1187),  Expect = 3e-164
 Identities = 199/202 (98%), Positives = 199/202 (98%), Gaps = 0/202 (0%)
 Frame = -3/+3

Query  1519  IGKREDCCIQDTFSIFWLRCKVLPQSY*LLTLYM*YSAEIIYAKMMY***Q**YVLIFFN  1340
             IGKR DCCIQDTFSIFWLRCKVLPQSY*LLTLYM*YSAEIIYAKMMY***Q**YVLIFFN
Sbjct  93    IGKRGDCCIQDTFSIFWLRCKVLPQSY*LLTLYM*YSAEIIYAKMMY***Q**YVLIFFN  272

Query  1339  REYV*AIIVLNKLFQKEIHGFGEPAIDICQIYTSLVGAKLLSLFLSLIKNK*AGRIAVSL  1160
             REYV*AIIVLNKLFQKEIHGFGEPAIDICQIYTSLVGAKLLSLFLSLIKNK*AGRIAVSL
Sbjct  273   REYV*AIIVLNKLFQKEIHGFGEPAIDICQIYTSLVGAKLLSLFLSLIKNK*AGRIAVSL  452

Query  1159  RRNGGHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSKS*D  980
             RRNGGHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSKS*D
Sbjct  453   RRNGGHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKGRRVRPIIKGKSKS*D  632

Query  979   SIDHKPPLLEDRTYSLTWVAEL  914
             SIDHKPPLLEDRTYSLTWVA  
Sbjct  633   SIDHKPPLLEDRTYSLTWVASF  698


 Score =  164 bits (486),  Expect = 3e-167
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)
 Frame = -1/+3

Query  918  SFKPNK*KQLKAGRCPFYIRTTRRRGASTAASIN**ICGPIPNSNIFIICSNTLRALDYK  739
            SFKPNK*KQLKAGRCPFYIRTTRRRGASTAASIN**ICGPIPNSNIFIICSNTLRALDYK
Sbjct  693  SFKPNK*KQLKAGRCPFYIRTTRRRGASTAASIN**ICGPIPNSNIFIICSNTLRALDYK  872

Query  738  *FGCFELWVQATCFLLC  688
            *FGCFELWVQATCFLLC
Sbjct  873  *FGCFELWVQATCFLLC  923


 Score =  160 bits (475),  Expect = 3e-164
 Identities = 79/83 (95%), Positives = 79/83 (95%), Gaps = 0/83 (0%)
 Frame = -2/+1

Query  935  PHVGR*ALNLISKNN*KQAGVPSIFAQRGDVEHRQPHPLINKFVDLYLTQIFLLFAPIR*  756
            P  G  ALNLISKNN*KQAGVPSIFAQRGDVEHRQPHPLINKFVDLYLTQIFLLFAPIR*
Sbjct  676  PSRGSLALNLISKNN*KQAGVPSIFAQRGDVEHRQPHPLINKFVDLYLTQIFLLFAPIR*  855

Query  755  ELWIINSLDASSYGYKQPVSYFV  687
            ELWIINSLDASSYGYKQPVSYFV
Sbjct  856  ELWIINSLDASSYGYKQPVSYFV  924


 Score =  159 bits (473),  Expect = 6e-165
 Identities = 79/84 (94%), Positives = 80/84 (95%), Gaps = 0/84 (0%)
 Frame = +1/-3

Query  685  LTK*ETGCLYP*LEASKLFIIQSS*RIGANNKNI*VRYRSTNLLINGCGCRCSTSPRCAN  864
            +TK*ETGCLYP*LEASKLFIIQSS*RIGANNKNI*VRYRSTNLLINGCGCRCSTSPRCAN
Sbjct  926  VTK*ETGCLYP*LEASKLFIIQSS*RIGANNKNI*VRYRSTNLLINGCGCRCSTSPRCAN  747

Query  865  IEGTPACF*LFLLIRFKAQRPT*G  936
            IEGTPACF*LFLLIRFKA  P  G
Sbjct  746  IEGTPACF*LFLLIRFKASDPREG  675


 Score =  157 bits (466),  Expect = 2e-158
 Identities = 78/79 (98%), Positives = 79/79 (100%), Gaps = 0/79 (0%)
 Frame = +2/-1

Query  686  *QSRKQVACTHNSKHPNYL*SRALSVLEQIIKIFELGIGPQIY*LMDAAVDAPRRLVVRI  865
            *QSRKQVACTHNSKHPNYL*SRALSVLEQIIKIFELGIGPQIY*LMDAAVDAPRRLVVRI
Sbjct  925  *QSRKQVACTHNSKHPNYL*SRALSVLEQIIKIFELGIGPQIY*LMDAAVDAPRRLVVRI  746

Query  866  *KGHLPAFNCFYLLGLKLS  922
            *KGHLPAFNCFYLLGLKL+
Sbjct  745  *KGHLPAFNCFYLLGLKLA  689


 Score =  151 bits (447),  Expect = 3e-45
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)
 Frame = +3/-2

Query  687  NKVGNRLLVPITRSIQTIYNPELLAYWSK**KYLS*V*VHKFIN*WMRLSMLHVASLCEY  866
            NKVGNRLLVPITRSIQTIYNPELLAYWSK**KYLS*V*VHKFIN*WMRLSMLHVASLCEY
Sbjct  924  NKVGNRLLVPITRSIQTIYNPELLAYWSK**KYLS*V*VHKFIN*WMRLSMLHVASLCEY  745

Query  867  RRDTCLLLIVFTY*V*S  917
            RRDTCLLLIVFTY*V*S
Sbjct  744  RRDTCLLLIVFTY*V*S  694


 Score =  149 bits (441),  Expect = 6e-153
 Identities = 77/77 (100%), Positives = 77/77 (100%), Gaps = 0/77 (0%)
 Frame = -3/+2

Query  916  L*T**VKTIKSRQVSLLYSHNEATWSIDSRIH*LINLWTYT*LKYFYYLLQYAKSSGL*I  737
            L*T**VKTIKSRQVSLLYSHNEATWSIDSRIH*LINLWTYT*LKYFYYLLQYAKSSGL*I
Sbjct  695  L*T**VKTIKSRQVSLLYSHNEATWSIDSRIH*LINLWTYT*LKYFYYLLQYAKSSGL*I  874

Query  736  VWMLRVMGTSNLFPTLL  686
            VWMLRVMGTSNLFPTLL
Sbjct  875  VWMLRVMGTSNLFPTLL  925


 Score = 68.5 bits (197),  Expect = 3e-164
 Identities = 29/31 (93%), Positives = 30/31 (96%), Gaps = 0/31 (0%)
 Frame = -1/+3

Query  1608  SERMSKKDAHNWEEWGKA*SWPAIGFRESAL  1516
             SERMSKKDAHNWEEWGKA*SWPAIGFRES +
Sbjct  3     SERMSKKDAHNWEEWGKA*SWPAIGFRESGI  95


 Score = 67.6 bits (194),  Expect = 6e-165
 Identities = 30/30 (100%), Positives = 30/30 (100%), Gaps = 0/30 (0%)
 Frame = +3/-2

Query  1521  RFREIQ*RANFKLYPTPPNYGHPFLTSFR*  1610
             RFREIQ*RANFKLYPTPPNYGHPFLTSFR*
Sbjct  90    RFREIQ*RANFKLYPTPPNYGHPFLTSFR*  1


 Score = 66.2 bits (190),  Expect = 9e-09
 Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 0/46 (0%)
 Frame = -2/+1

Query  1610  LAKGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQT*RLLHSRYFFYF  1473
             LAKGCQKRMPIIGRSGVKLKVGPLLDFAKA      +   +  F F
Sbjct  1     LAKGCQKRMPIIGRSGVKLKVGPLLDFAKAALANVEIAAFKILFLF  138


 Score = 62.3 bits (178),  Expect = 3e-167
 Identities = 30/30 (100%), Positives = 30/30 (100%), Gaps = 0/30 (0%)
 Frame = -3/+2

Query  1609  *RKDVKKGCP*LGGVG*SLKLARYWISRKR  1520
             *RKDVKKGCP*LGGVG*SLKLARYWISRKR
Sbjct  2     *RKDVKKGCP*LGGVG*SLKLARYWISRKR  91


 Score = 61.9 bits (177),  Expect = 4e-126
 Identities = 29/29 (100%), Positives = 29/29 (100%), Gaps = 0/29 (0%)
 Frame = +1/-3

Query  1522  AFAKSNSGPTLSFTPLLPIMGILF*HPFA  1608
             AFAKSNSGPTLSFTPLLPIMGILF*HPFA
Sbjct  89    AFAKSNSGPTLSFTPLLPIMGILF*HPFA  3


 Score = 60.9 bits (174),  Expect = 3e-45
 Identities = 29/29 (100%), Positives = 29/29 (100%), Gaps = 0/29 (0%)
 Frame = +2/-1

Query  1523  LSRNPIAGQL*ALPHSSQLWASFFDILSL  1609
             LSRNPIAGQL*ALPHSSQLWASFFDILSL
Sbjct  88    LSRNPIAGQL*ALPHSSQLWASFFDILSL  2


>gi|142245|gb|M60490.1|ATUORF  Agrobacterium rhizogenes ORFs 10, 11, 12, 13, 13a, 14, mas1` 
and mas2` genes, complete cds
Length=12733

 Score =  335 bits (1004),  Expect = 7e-160
 Identities = 154/252 (61%), Positives = 195/252 (77%), Gaps = 0/252 (0%)
 Frame = +1/-1

Query  1855  ITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLDL  2034
             I M   + FLPRF P +LT AW+QINL E IRFAF  YS+ Y K L+ +QK WA  VL+L
Sbjct  3652  IAMPTHMHFLPRFYPRNLTQAWNQINLCEEIRFAFITYSQVYGKTLMEYQKGWARDVLEL  3473

Query  2035  KENSPPIYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQSI  2214
             +ENSPP+ ILKQLA++LK+++CYH PMFVSQPDLARE +QHVFVYLSREKMQKVL+EQSI
Sbjct  3472  EENSPPVNILKQLAQILKDQLCYHRPMFVSQPDLAREREQHVFVYLSREKMQKVLREQSI  3293

Query  2215  TFGMEAVLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLEL  2394
             TFGMEAV+ATTIQPYR +L+++ +L  HNLAWP  R  + DLECFIAIFAS+LF+HLLE 
Sbjct  3292  TFGMEAVVATTIQPYRCDLSVKALLHAHNLAWPLRRMVKSDLECFIAIFASTLFVHLLEA  3113

Query  2395  KVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPEPDLTLRLSG  2574
             K+TN+YGRE  C FF+R GTENR YDV+ACG T+F ++   +  PAA+ P+ +L L +  
Sbjct  3112  KLTNLYGREAPCAFFVRLGTENRRYDVIACGLTKFDESDCVVPPPAAAQPDLNLRLSVQS  2933

Query  2575  PDQEGEEGVMKP  2610
              +   +  ++ P
Sbjct  2932  EEDVMKPEIVYP  2897


 Score =  248 bits (740),  Expect = 5e-143
 Identities = 117/183 (63%), Positives = 140/183 (76%), Gaps = 0/183 (0%)
 Frame = -2/+3

Query  701   VSYFVNMAEDDLCSLFFKLKVEDVTSSDELARHMKNASNERKPLIEPGENQSMDIDEEGG  522
             VS+F NMAE DLC+LF  L+V+DV SSDEL +H+++ S+ER  LIE GEN SMDIDEE  
Sbjct  4722  VSHFCNMAEVDLCALFSNLRVKDVASSDELMKHIQSVSDERVSLIELGENPSMDIDEEHP  4901

Query  521   SVGHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGF  342
                   L+LYVDCPTMM CFYGG LPYN   GALLTNLPPYQ +V+ +EVNRGLR+ASGF
Sbjct  4902  PQTPETLFLYVDCPTMMQCFYGGWLPYNSTHGALLTNLPPYQKNVSFNEVNRGLREASGF  5081

Query  341   FGYADPMRSAYFAAFSFPGRVIKLNEQMELTSTKGKCLTFDLYASTQLRFEPGELVRHGE  162
              GY DP+RSAYFAA SFPG V KL+EQ+ LTST G+ L FDLYA+ +   +  ++V HGE
Sbjct  5082  VGYEDPIRSAYFAALSFPGHVAKLDEQLRLTSTDGETLIFDLYATRRHELDRDKVVSHGE  5261

Query  161   CKF  153
             C F
Sbjct  5262  CMF  5270


 Score =  236 bits (706),  Expect = 5e-143
 Identities = 136/234 (58%), Positives = 155/234 (66%), Gaps = 0/234 (0%)
 Frame = -2/+3

Query  2555  RSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQATSLP*TLVTFNSSK*M  2376
             R  SG  AAG    ++   N V PQA TS* RFSVP R K  Q  SLP* LV F SSK  
Sbjct  2952  RFKSGCAAAGGGTTQSLSSNFVRPQAITS*RRFSVPSRTKNAQGASLP*RLVNFASSKWT  3131

Query  2375  NKELAKMAMKHSKSGSSVRLCGQARL*TRSISWRASSLRYG*IVVASTASIPNVMDCSFS  2196
             NK LAK+AMKHS+S  ++R  GQARL*  S +    S R G*IVVA+TASIPNV+DCS S
Sbjct  3132  NKVLAKIAMKHSRSDFTMRRSGQARL*AWSSALTERSQR*G*IVVATTASIPNVIDCSLS  3311

Query  2195  TFCIFSRER*TNTCWSFSRARSG*LTNIGG**QTLFFKSSASCLSIYIGGEFSFKSSTAR  2016
             TFCIFSRER*TNTC S SRA+SG LTN+G ** +  FK  A+CL I+ GGEFS  S T+R
Sbjct  3312  TFCIFSRER*TNTCCSLSRAKSGWLTNMGR**HSWSFKI*ANCLRIFTGGEFSSNSRTSR  3491

Query  2015  AHRFWKCRRGLL*SRL*IAKANRIPSNRFIWLHAGVRSTG*NRGRNSNLGSIVM  1854
             AH FW   R L *+ L*+ KA RI S++ IW  A VR  G* RGR      I M
Sbjct  3492  AHPFWYSMRVLP*TWL*VIKAKRISSHKLIWFQACVRFLG*KRGRKCMWVGIAM  3653


 Score =  225 bits (671),  Expect = 5e-105
 Identities = 123/235 (52%), Positives = 149/235 (63%), Gaps = 0/235 (0%)
 Frame = -1/+2

Query  2529  RT*YPEGIFGELCGAASYNIIGAVFSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGD  2350
             R  Y    F EL  AA YN+I AV S  P KE A  LSP+ VG F L+QV+E GTC+N +
Sbjct  2978  RRWYHTVAFIELRKAAGYNVIAAVLSA*PHKERARCLSPIKVGQFCLKQVDE*GTCKNSN  3157

Query  2349  EAF*IRFLRAAVRPSKVVNTEHLLEGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARK  2170
             EAF IRF  A  RPSKVV+ E  L+ ++A I LNR    GLHSK N LF QHFLH  ARK
Sbjct  3158  EAFQIRFYHAPERPSKVVSMEQCLDRKVATIGLNRRCYDGLHSKRNRLFPQHFLHFFARK  3337

Query  2169  IDKYMLVVFSSQIRLTNKHRRMIADFVLQELS*LFKYIYRWRVFLQI*HCKSPSFLEMQE  1990
             I+KYML+  S  IRL +KH  +IA  VL  LS*LF+ I+RWRVFLQ  +  SP  L + E
Sbjct  3338  INKYMLLPLSG*IRLADKHGTVIA*LVL*NLS*LFEDIHRWRVFLQFKNVSSPPLLVLHE  3517

Query  1989  GFAIVTAIDCKSKSDPLE*VYLAPCWSEIYWLKSWKE*QFGIHCDVSWIVTKKAS  1825
             GFA+  AI  K ++D L *V L P   +I W+K+WKE   G HCD  +  T  +S
Sbjct  3518  GFAVDLAIGDKGEADLLA*VDLVPGLRQISWVKAWKEVHVGRHCDDEYEPTASSS  3682


 Score =  210 bits (626),  Expect = 2e-108
 Identities = 115/251 (45%), Positives = 150/251 (59%), Gaps = 0/251 (0%)
 Frame = +3/-3

Query  1803  PYFKWPWHLPFS*LSNSHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*  1982
             P   + W+     +   H N    A+PST+   +S + +EPD+ +RGDP+   +L*P L 
Sbjct  3704  PAPSFKWYWNLQLVHTHHRNAYPHALPSTLLPKKSDAGLEPDQLMRGDPLRLYHL*PSLR  3525

Query  1983  QTPPAFPETMGSCSARFEGKLSTDIYT*TTS*ALEEQSLLSSSYVC*SAGSGSRKRPTCI  2162
             Q P   PE +GS  +   GKL+T  Y  T S   +  ++LS S+VC   G   R+  TCI
Sbjct  3524  QNPHGVPEGVGSRRS*IGGKLATGEYPQTVSSDFKGPTMLSPSHVCQPTGFSPREGATCI  3345

Query  2163  CLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FR  2342
             CLSFSR++AESAEGTI Y+WNGGR  ++DST+S R    G APCSQPCLAA  HG  *  
Sbjct  3344  CLSFSRKNAESAEGTIDYVWNGGRRSNDDSTLSLRPFGQGTAPCSQPCLAAPAHGKI*SG  3165

Query  2343  MLHRHFRKFLVHSLAGVKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDI  2522
             MLH +F K+L+  LA  K DQ L ERG+L +L AAR *+PPL*  SLR + +  K     
Sbjct  3164  MLHCYFCKYLIRPLA*GKIDQPLWERGTLRVLCAARH*EPPL*RYSLRPYEVR*KRLCGT  2985

Query  2523  TSGRLLTGARP  2555
             TSG      +P
Sbjct  2984  TSGGSAARLKP  2952


 Score =  200 bits (596),  Expect = 4e-99
 Identities = 121/237 (51%), Positives = 143/237 (60%), Gaps = 0/237 (0%)
 Frame = +2/-2

Query  1820  LALAFFVTIQLTSQWIPNCYSFHDFNQ*ISLQHGAR*TYSRGSDLLLQSIAVTIANPSCI  1999
             + L   V    +SQ +P C SFH F Q I  + G R TY+R S   L  IA + A PS  
Sbjct  3687  MVLELAVGSYSSSQCLPTCTSFHAFTQEI*RRPGTRSTYARRSASPLSPIAKSTAKPSWS  3508

Query  2000  SRNDGLLQC*I*RKTLHRYIYLNN*LSS*RTKSAIILLCLLVSRIWLEKTTNMYLSIFLA  2179
             +R  GL      RKT HR I  N+*L  *RT  AI + CL  +RI  E+ +NMYL IFLA
Sbjct  3507  TRRGGLETFLNWRKTRHR*ISSNS*LRF*RTNYAITVPCLSANRI*PERGSNMYLFIFLA  3328

Query  2180  RRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*NASSPF  2359
             ++CRKC* NN L LEWRP  ++RFN I A+  SR CS+ TTLLGR+ A  NLI NAS  F
Sbjct  3327  KKCRKC*GNNRLRLEWRPS*QRRFNPIVATFRSRHCSMLTTLLGRSGAW*NLIWNASLLF  3148

Query  2360  SQVPCSFTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSPKMPSGYHVR  2530
              QVP S TC    *PTF GER LA S CG  L+TA M L* AA  +S K    YH+R
Sbjct  3147  LQVPYSSTCLRQN*PTFMGERHLARSLCG*ALRTAAMTL*PAALRSSMKATVWYHLR  2977


 Score =  196 bits (585),  Expect = 7e-160
 Identities = 114/183 (62%), Positives = 128/183 (69%), Gaps = 0/183 (0%)
 Frame = +1/-1

Query  154   NLHSPCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK*ALRIGSA  333
             N+HSP LT    S+    +A*RS +R  P VEVS  CS SL T PGK +AAK*ALRIGS+
Sbjct  5269  NMHSPWLTTLSRSSSCRRVA*RSKIRVSPSVEVSLNCSSSLATWPGKLSAAK*ALRIGSS  5090

Query  334   *PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPCIQL*GKDPP*KQSIIVGQST*RYSSPW  513
              P KPDA LSPL TS ++T  WYGGRLVRSAPC++L*G  PP*K  IIVGQST*R S   
Sbjct  5089  YPTKPDASLSPLFTSLKLTFFWYGGRLVRSAPCVEL*GNHPP*KHCIIVGQST*RNSVSG  4910

Query  514   PTDPPSSSISID*FSPGSIKGLRSFEAFFMCLASSSLLVTSSTLSLKKREHRSSSAMLTK  693
                  SSSISID FSP SI+  RS E  +MC  SSSL  TS TL L+KR HRS+SAML K
Sbjct  4909  VWGGCSSSISIDGFSPSSIRETRSSETLWMCFISSSLDATSLTLRLEKRAHRSTSAMLQK  4730

Query  694   *ET  702
              ET
Sbjct  4729  WET  4721


 Score =  181 bits (539),  Expect = 4e-85
 Identities = 110/227 (48%), Positives = 133/227 (58%), Gaps = 0/227 (0%)
 Frame = -3/+1

Query  2554  GLAPVRRRPDVISRGHFW*IVWCRKLQHHRGGFQSLAAERRCKLPLSRKRWSLLTPASE*  2375
             GL+     P+V+    F      R+L  H GG Q LAA+R  K+PLS K WS+L  AS  
Sbjct  2953  GLSLAALPPEVVPHSRFHRTS*GRRL*RHSGGSQCLAAQRTRKVPLSHKGWSILPQASGR  3132

Query  2374  TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDMVESLSPARPPFQM*WIVPSA  2195
              R L+K +*SI +Q+ PC  AAKQGCEHGA P  + R+D VES    RPPFQ * IVPSA
Sbjct  3133  IRYLQK*Q*SIPDQILPCAGAAKQGCEHGAVP*PKGRNDRVESSLLRRPPFQT*SIVPSA  3312

Query  2194  LSASSREKDRQIHVGRFLEPDPAD*QT*EDDSRLCSSRAQLVV*VYISVESFPSNLALQE  2015
             LSA  REKD+QIHV   L  +P  *QT + DS +   +++L V* Y  V SFP      E
Sbjct  3313  LSAFFREKDKQIHVAPSLGLNPVG*QTWDGDSIVGPLKSELTV*GYSPVASFPPIQERLE  3492

Query  2014  PIVSGNAGGVCYSHGYRLQKQIGSPRIGLSGSMLE*DLLVEIVEGIA  1874
             P  SG   G C   GYR  ++ GSPRI  SGS    D L + VEG A
Sbjct  3493  PTPSGTP*GFCRRLGYR**RRSGSPRIS*SGSRPASDFLGKSVEGSA  3633


 Score =  178 bits (529),  Expect = 2e-108
 Identities = 98/184 (53%), Positives = 119/184 (64%), Gaps = 0/184 (0%)
 Frame = +3/-3

Query  153   KLALAMPHQLTRFEPKLGAGIEVECQTLSLCRS*LHLLIQLDDTPRERKCSEVGAPHRIR  332
             K A  M + L   E      IEV+ Q+LS+CRS   LLIQL D  RE KC EVGAP RI 
Sbjct  5270  KHAFTMAYHLITVELMPPGCIEVKDQSLSVCRSEPQLLIQLGDVARETKCREVGAPDRIL  5091

Query  333   VTEKT*CLPEPSIDLIESHIMLVRGKVGEECALHPIVRQGPSIEAEHHRRAVDVEVQQPV  512
             V ++T*CLP+P I  IE++I+LVR ++GEE ++  IV Q PSIEA HHR AV+VE Q   
Sbjct  5090  VPDET*CLPKPPIHFIETYILLVRRQIGEERSMRRIVGQPPSIEALHHRWAVNVEEQCLR  4911

Query  513   AHRPSFFVNIHRLILTRLDQGFTLI*GVLHVSS*LIAACHILHFELEKERTQVVFSHVNK  692
                   FV+IHR +LT  DQG  L+*  L V   LIA  HIL+ ++ KE TQV FSHV K
Sbjct  4910  RLGRMLFVDIHRRVLTEFDQGNPLV*DALDVLHQLIA*RHILNPKIGKESTQVNFSHVTK  4731

Query  693   VGNR  704
             VGNR
Sbjct  4730  VGNR  4719


 Score =  168 bits (498),  Expect = 5e-105
 Identities = 94/183 (51%), Positives = 112/183 (61%), Gaps = 0/183 (0%)
 Frame = -1/+2

Query  702   CFLLC*HG*RRPVFSLFQAQSGGCDKQR*AS*THEERLK*A*TLDRAG*ESIDGY*RRRR  523
             CF L *HG*  PV SLFQ+   GC  +R*A   H +RL+ A   DR  *E +DGY RR  
Sbjct  4721  CFPLL*HG*S*PVCSLFQS*G*GCGVKR*ADEAHPKRLRRAGFPDRTR*EPVDGYRRRAS  4900

Query  522   VGGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA*CDSR*GQ*RAQASIRF  343
                    VPLR LP+DDA+LLWRV+ALQ DA   PHQ + VP  C  +* +* A   IRF
Sbjct  4901  SPNA*DTVPLR*LPNDDAMLLWRVVALQFDAWSAPHQSAAVPEECKFQ*SE*GA*GGIRF  5080

Query  342   FRLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA*VRTW*VGEAWR  163
              R+RGSY ERLLR   FPW   QA *A  A+FD+ + SD+ PLC   A* R  * G+ W 
Sbjct  5081  RRVRGSYPERLLRGT*FPWPRRQAG*AVEAHFDRRRDSDL*PLCNPAA*ARP**GGKPW*  5260

Query  162   VQV  154
             + V
Sbjct  5261  MHV  5269


 Score =  167 bits (496),  Expect = 4e-99
 Identities = 94/185 (50%), Positives = 111/185 (60%), Gaps = 0/185 (0%)
 Frame = +2/-2

Query  149   LQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*D  328
             +QTC  H  P +  R  A   HRG+ S++  LSK A +AH A    QG  + RSRRS *D
Sbjct  5274  IQTCIHHGLPPYHGRAHAAGLHRGQRSESLRLSK*ASTAHPAWRRGQGN*VPRSRRSG*D  5095

Query  329   PRNRKNLMLA*ALY*PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAA  508
             PR R+NLM  *A Y  H   H +GT   W*G   ASNC+A TLHRS ASS GS+RRGT +
Sbjct  5094  PRTRRNLMPP*APYSLH*NLHSSGTAADW*GALHASNCRATTLHRSIASSLGSQRRGTVS  4915

Query  509   RGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHRCLSHPPL*A*KRENTGRLQPC*  688
             +      LR+YPS  SH  RS   A LRR  C   AHR   HP  *  KRE+TG+LQPC 
Sbjct  4914  QAFGEDALRRYPSTGSHRVRSGKPARLRRFGCASSAHRLTPHP*P*DWKREHTGQLQPCY  4735

Query  689   QSRKQ  703
             +S KQ
Sbjct  4734  KSGKQ  4720


 Score =  155 bits (460),  Expect = 4e-85
 Identities = 95/184 (51%), Positives = 111/184 (60%), Gaps = 0/184 (0%)
 Frame = -3/+1

Query  703   LFPTLLTWLKTTCVLSFSSSKWRM*QAAMS*LDT*RTPQMSVNP*SSRVRINRWILTKKE  524
             LFPT +TWLK TCVLSF     RM + AMS*  T +  Q S  P*S+ VR  RWI TK  
Sbjct  4720  LFPTFVTWLKLTCVLSFPILGLRMWRQAMS**STSKASQTSGFP*SNSVRTRRWISTKSI  4899

Query  523   GRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGKHQV  344
                    C+ST TA+R*C+ASMEG C TI     SSP   RT  M*+SM+ I G G+HQV
Sbjct  4900  LPKRLRHCSSTLTAQR*CNASMEGGCPTIRRMERSSPICRRTRRM*VSMK*IGGLGRHQV  5079

Query  343   FSVTRILCGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPSLGSNLVSW*GMA  164
              S TRIL GAPTS H +SL  S S MS    LRQ E +*  TSM    + S ++ W* M 
Sbjct  5080  SSGTRILSGAPTSRHLVSLATSPSWMSS*GSLRQTERL*SLTSMQPGGMSSTVIRW*AMV  5259

Query  163   SASL  152
             +A L
Sbjct  5260  NACL  5271


 Score = 53.0 bits (150),  Expect = 7e-160
 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 0/51 (0%)
 Frame = +1/-2

Query  1009  WDAPAYLYLCCGKALLCQAKPHVRPVGTKATQLAIYYRVS*KHVHGHHSFL  1161
             +  PAYLYLCC +    Q +PHVRPVGTK  +   +  +S K     HSF+
Sbjct  4431  YSTPAYLYLCCERRHFFQPEPHVRPVGTKPNRCRFFIGLSFKT*QRQHSFI  4279


 Score = 47.7 bits (134),  Expect = 2e-108
 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 0/37 (0%)
 Frame = +2/-3

Query  1016  HPPTFIYAAERRYFVKLNPTLGLSAPKQHSWQFIIGS  1126
             HPPTFIYAA+   F  L+PTLGLSAP Q    F + S
Sbjct  4424  HPPTFIYAAKDATFFNLSPTLGLSAPSQTGVAFSLDS  4314


 Score = 44.4 bits (124),  Expect = 5e-143
 Identities = 20/28 (71%), Positives = 22/28 (78%), Gaps = 0/28 (0%)
 Frame = -3/+3

Query  1099  LLWCRQA*RGV*LDKVAPFRSINKGRRV  1016
             L WCRQA*RG  ++K   FRSINKGRRV
Sbjct  4341  LAWCRQA*RGAQVEKSGVFRSINKGRRV  4424


 Score = 44.4 bits (124),  Expect = 4e-99
 Identities = 20/27 (74%), Positives = 22/27 (81%), Gaps = 0/27 (0%)
 Frame = +3/-1

Query  1017  TRLPLFMLRKGATLSS*TPR*ACRHQS  1097
             TRLPLFMLRK    S+* PR*ACRHQ+
Sbjct  4423  TRLPLFMLRKTPLFST*APR*ACRHQA  4343


 Score = 37.5 bits (103),  Expect = 5e-105
 Identities = 19/27 (70%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
 Frame = -1/+1

Query  1095  FGADRPNVGFSLTK*RLSAA*IKVGGC  1015
              GADRPNVG  L K    AA*IKVGGC
Sbjct  4345  LGADRPNVGLRLKKVASFAA*IKVGGC  4425


 Score = 35.5 bits (97),  Expect = 4e-85
 Identities = 18/26 (69%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
 Frame = -2/+2

Query  1094  LVPTGLTWGLA*QSSAFPQHK*R*AG  1017
             LVPTGLTWG  *+     QHK*R*AG
Sbjct  4346  LVPTGLTWGSG*KKWRLSQHK*R*AG  4423


 Score = 34.2 bits (93),  Expect = 5e-143
 Identities = 13/16 (81%), Positives = 13/16 (81%), Gaps = 0/16 (0%)
 Frame = -2/+1

Query  1787  PIRHSLWSGKPEVVWQ  1740
             PI HSLWSGK E VWQ
Sbjct  3706  PISHSLWSGKQESVWQ  3753


 Score = 32.2 bits (87),  Expect = 7e-160
 Identities = 14/17 (82%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
 Frame = +3/-2

Query  1737  LLPNYLWLSRPETVSDW  1787
             LLPN L LSRPETV+DW
Sbjct  3756  LLPN*LLLSRPETVADW  3706


 Score = 31.5 bits (85),  Expect = 5e-143
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 0/34 (0%)
 Frame = -3/+3

Query  1624  RVVWP*RKDVKKGCP*LGGVG*SLKLARYWISRK  1523
             R++    K V K  P* GGVG  LK+A YW+ +K
Sbjct  3867  RILLALLKVVSKRFP*WGGVGAELKIAGYWVCKK  3968


 Score = 31.2 bits (84),  Expect = 7e-160
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 0/25 (0%)
 Frame = +2/-1

Query  917   LSDPREGIGSVLQ*WWFVVYGISAF  991
             L+  R GIGS +Q*WW ++  IS F
Sbjct  4513  LAKARMGIGSDVQ*WWHIINRISLF  4439


 Score = 31.2 bits (84),  Expect = 7e-160
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 0/70 (0%)
 Frame = +3/-1

Query  1452  NTLHLNQKIEKVS*MQQSSRLPMRFREIQ*RANFKLYPTPPNYGHPFLTSFR*GQTTRQE  1631
             +T +LN KI               F + Q* A     PTPP+YG+   T+F      R+ 
Sbjct  4039  STSYLNHKIIMPRDYNHQYSCQFNFLQTQ*PAILSSAPTPPHYGNLLETTFNNANKIRKS  3860

Query  1632  KANPVL*THE  1661
                 +   H+
Sbjct  3859  NRTTINVNHQ  3830


 Score = 31.2 bits (84),  Expect = 2e-108
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 0/50 (0%)
 Frame = +2/-3

Query  1523  LSRNPIAGQL*ALPHSSQLWASFFDILSLRPNNTTRKSKPSTMNP*TITH  1672
             L  NPI       PH S LW SF +    R  NT ++       P ++ H
Sbjct  3968  LFTNPITSNFKLCPHPSPLWESFRNNF**RQQNTKKQPHYYQREPPSMQH  3819


 Score = 30.9 bits (83),  Expect = 2e-108
 Identities = 14/17 (82%), Positives = 15/17 (88%), Gaps = 0/17 (0%)
 Frame = +2/-1

Query  1736  IVAKLPLAFPTRDCV*L  1786
             I+AKL LAFPTRDC *L
Sbjct  3757  IIAKLTLAFPTRDCG*L  3707


 Score = 29.9 bits (80),  Expect = 5e-143
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 0/21 (0%)
 Frame = -1/+3

Query  990   KAEIP*TTNHHYWRTEPIPSR  928
             K EI     HHYW +EPIP R
Sbjct  4440  KREILLMICHHYWTSEPIPIR  4502


 Score = 29.5 bits (79),  Expect = 7e-160
 Identities = 14/19 (73%), Positives = 16/19 (84%), Gaps = 0/19 (0%)
 Frame = +3/-3

Query  2661  AGNLYL*VCHKFYVPSRSL  2717
             AG+LYL*VC  F+V SRSL
Sbjct  2864  AGHLYL*VCRGFHVLSRSL  2808


 Score = 28.9 bits (77),  Expect = 4e-99
 Identities = 13/16 (81%), Positives = 13/16 (81%), Gaps = 0/16 (0%)
 Frame = +1/-3

Query  1741  CQTTSGFPDQRLCLIG  1788
             CQT S FPDQRL LIG
Sbjct  3752  CQTDSCFPDQRLWLIG  3705


 Score = 28.6 bits (76),  Expect = 2e-108
 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 0/18 (0%)
 Frame = +2/-2

Query  2654  SPCRQPLSMSLS*VLCTL  2707
             +PCR PLSMSLS   C+L
Sbjct  2871  APCRPPLSMSLSWFPCSL  2818


 Score = 28.6 bits (76),  Expect = 4e-99
 Identities = 12/15 (80%), Positives = 14/15 (93%), Gaps = 0/15 (0%)
 Frame = +1/-1

Query  2659  LQATFIYEFVISSMY  2703
             LQATFIYEFV+ SM+
Sbjct  2866  LQATFIYEFVVVSMF  2822


 Score = 27.9 bits (74),  Expect = 5e-105
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 0/45 (0%)
 Frame = -1/+1

Query  1590  KDAHNWEEWGKA*SWPAIGFRESALANVKIAAFKILFLFSG*DVK  1456
             KD+HN E WG++     IGF +S + +          LF  *D+K
Sbjct  3901  KDSHNGEGWGQSLKLLVIGFVKS*IGSCIDGCNHEALLFYD*DMK  4035


 Score = 27.9 bits (74),  Expect = 5e-143
 Identities = 10/10 (100%), Positives = 10/10 (100%), Gaps = 0/10 (0%)
 Frame = -1/+3

Query  732   GCFELWVQAT  703
             GCFELWVQAT
Sbjct  4689  GCFELWVQAT  4718


 Score = 27.6 bits (73),  Expect = 5e-143
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 0/27 (0%)
 Frame = -1/+2

Query  2649  KSALGFFLQVYCSRLHDALLAFLIRPR  2569
             ++ALGF L+VY  RLH    A    P+
Sbjct  2873  QAALGFILRVYYLRLHHVFFALH*EPQ  2953


 Score = 27.6 bits (73),  Expect = 7e-160
 Identities = 10/11 (90%), Positives = 11/11 (100%), Gaps = 0/11 (0%)
 Frame = +2/-1

Query  701   QVACTHNSKHP  733
             +VACTHNSKHP
Sbjct  4720  EVACTHNSKHP  4688


 Score = 27.6 bits (73),  Expect = 7e-160
 Identities = 9/21 (42%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
 Frame = +2/-2

Query  2726  NLGSCSVRCNVLTYFLVLNIF  2788
             + G+CS+R NV   F+++N+F
Sbjct  2802  SFGNCSIRPNVFDLFILINVF  2740


 Score = 27.2 bits (72),  Expect = 5e-105
 Identities = 14/18 (77%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
 Frame = -1/+3

Query  1785  NQTQSLVGKARGSLATIT  1732
             NQ QSLVGKAR SLA I+
Sbjct  3708  NQPQSLVGKARVSLAIIS  3761


 Score = 26.6 bits (70),  Expect = 5e-143
 Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 0/17 (0%)
 Frame = -1/+2

Query  2706  RVHRTYDKLIDKGCLQG  2656
             R H  +DKLIDKG LQG
Sbjct  2819  REHGNHDKLIDKGGLQG  2869


 Score = 26.6 bits (70),  Expect = 5e-143
 Identities = 11/13 (84%), Positives = 13/13 (100%), Gaps = 0/13 (0%)
 Frame = -2/+3

Query  1706  RP*NLDQAKILHA  1668
             RP*N+DQAK+LHA
Sbjct  3792  RP*NMDQAKMLHA  3830


 Score = 26.6 bits (70),  Expect = 4e-85
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 0/35 (0%)
 Frame = -2/+3

Query  1616  LALAKGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQ  1512
             LAL K   KR P  G  G +LK+       K +WQ
Sbjct  3876  LALLKVVSKRFP*WGGVGAELKIAGYWVCKKLNWQ  3980


 Score = 26.6 bits (70),  Expect = 5e-105
 Identities = 11/16 (68%), Positives = 13/16 (81%), Gaps = 0/16 (0%)
 Frame = -3/+2

Query  982   DSIDHKPPLLEDRTYS  935
             DS+D  PPLL+ RTYS
Sbjct  4448  DSVDDMPPLLDIRTYS  4495


 Score = 26.6 bits (70),  Expect = 7e-160
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +3/-3

Query  1785  WRQFPTPYFKWPWHL  1829
             W   P P FKW W+L
Sbjct  3716  WLIGPAPSFKWYWNL  3672


 Score = 26.2 bits (69),  Expect = 5e-105
 Identities = 10/16 (62%), Positives = 14/16 (87%), Gaps = 0/16 (0%)
 Frame = -1/+2

Query  1704  ALKSGSSENTACVIVH  1657
             A+K GSS+N AC++VH
Sbjct  3794  AMKHGSSKNAACLVVH  3841


 Score = 26.2 bits (69),  Expect = 4e-99
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 0/49 (0%)
 Frame = +3/-3

Query  1488  S*MQQSSRLPMRFREIQ*RANFKLYPTPPNYGHPFLTSFR*GQTTRQEK  1634
             S*+Q S +LP++       +NFKL P P      F  +F * Q   +++
Sbjct  4004  S*LQPSIQLPIQLFTNPITSNFKLCPHPSPLWESFRNNF**RQQNTKKQ  3858


 Score = 25.9 bits (68),  Expect = 4e-85
 Identities = 13/17 (76%), Positives = 14/17 (82%), Gaps = 0/17 (0%)
 Frame = -3/+2

Query  1786  QSDTVSGRESQR*FGNN  1736
             QS TVSGRES+  FGNN
Sbjct  3707  QSATVSGRESKSQFGNN  3757


 Score = 25.2 bits (66),  Expect = 1.5
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 0/54 (0%)
 Frame = -2/+2

Query  1616  LALAKGCQKRMPIIGRSGVKLKVGPLLDFAKAHWQT*RLLHSRYFFYFLVKM*S  1455
             + + K C  ++PI+GR G +     LL   K       ++     +YF++K+*S
Sbjct  3875  VGVIKSCF*KIPIMGRGGGRA*NCWLLGL*KVELAAVLMVVITRHYYFMIKI*S  4036


 Score = 23.9 bits (62),  Expect = 1.5
 Identities = 7/10 (70%), Positives = 10/10 (100%), Gaps = 0/10 (0%)
 Frame = -2/+1

Query  1736  SHQDRCARHG  1707
             SHQ+RC++HG
Sbjct  3763  SHQNRCSKHG  3792


 Score = 22.6 bits (58),  Expect = 1.5
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = -3/+1

Query  1708  GGLKIWIKRKYCM  1670
             GG + WIK+K CM
Sbjct  3790  GGHETWIKQKCCM  3828


>gi|38971|emb|X15952.1|AROLBTR  Agrobacterium rhizogenes Ri plasmid DNA for rolB(TR) gene
Length=1720

 Score =  152 bits (451),  Expect = 2e-47
 Identities = 71/144 (49%), Positives = 99/144 (68%), Gaps = 0/144 (0%)
 Frame = +1/+1

Query  2131  DLARENDQHVFVYLSREKMQKVLKEQSITFGMEAVLATTIQPYRSELALQEMLRVHNLAW  2310
             DLA E  Q++F+Y+S EK+Q++L  +    G EA +AT+IQPYRSEL+  EM RVHNLAW
Sbjct  1000  DLALERQQYLFIYVSCEKIQELLFNRRFLVGTEAAVATSIQPYRSELSRGEMARVHNLAW  1179

Query  2311  PHSRTEEPDLECFIAIFASSLFIHLLELKVTNVYGREVACTFFLRRGTENRPYDVVACGT  2490
                +T+E D++CF+AIF+S+LF+   E +  ++YG EV C F +R+ T +R YDVVA G 
Sbjct  1180  RRRQTKESDMDCFVAIFSSTLFVSWYEARAVDIYGDEVLCPFLIRQATGDRDYDVVAYGF  1359

Query  2491  TQFTKNALGISRPAASSPEPDLTL  2562
             T+F +NA     PA +S   DL L
Sbjct  1360  TKFAENATSRRLPARASSFLDLKL  1431


 Score = 80.1 bits (232),  Expect = 6e-13
 Identities = 67/162 (41%), Positives = 82/162 (50%), Gaps = 0/162 (0%)
 Frame = -2/-3

Query  2615  AAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRK  2436
             + G  + +S S +       +S   +  AG+    AF  N V P ATTS* R  V  R +
Sbjct  1484  SVGSPSAASSSVADTGGPNFKSRKDDALAGKRRLVAFSANLVNP*ATTS*SRSPVAWRIR  1305

Query  2435  KVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQARL*TRSISWRASSLRY  2256
             K   TS P*      S +  NK L K+A K S S S V    QARL T +IS R SSLRY
Sbjct  1304  KGHRTSSP*MSTARASYQETNKVLEKIATKQSISDSLVWRRRQARLWTLAISPRDSSLRY  1125

Query  2255  G*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWSFSRARS  2130
             G*I VA+ AS+P       S+  IFS+E * N     S ARS
Sbjct  1124  G*IDVATAASVPTKKRRLNSSS*IFSQET*MNKYCCLSSARS  999


 Score = 72.2 bits (208),  Expect = 1e-10
 Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 0/121 (0%)
 Frame = -1/-2

Query  2511  GIFGELCGAASYNIIGAVFSPSPQKEGASYLSPVNVGHF*LQQVNEQGTCENGDEAF*IR  2332
             GI  EL    S++II AV      K+GA  L  ++V    L   N+Q   +N +EA  I 
Sbjct  1380  GILRELGEPISHDIIVAVSRRLADKKGAQDLVAIDVHCSCLVPGNKQSAGKNSNEAVHI*  1201

Query  2331  FLRAAVRPSKVVNTEHLLEGELAPIWLNRCRQHGLHSKCNGLFLQHFLHLLARKIDKYML  2152
             F   A  PSKVV+  HL       IWLNRCR   L         Q FL+LLA  ID+ +L
Sbjct  1200  FFGLAASPSKVVDPSHLSA**FTSIWLNRCRDCRLRPNQEAPIKQQFLNLLAGNIDE*IL  1021

Query  2151  V  2149
             +
Sbjct  1020  L  1018


 Score = 62.6 bits (179),  Expect = 2e-47
 Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 0/85 (0%)
 Frame = +1/+1

Query  1858  TMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLDLK  2037
             TM  +LL  P F P +L  +     L   ++ AF  Y++ +   ++ FQK +A  VL++ 
Sbjct  730   TMGSRLLIRPYFPPRNLCHSQDATTLLRELQDAFDSYNQSFRGEIMRFQKAFAERVLNMV  909

Query  2038  ENSPPIYILKQLAELLKNKVCYHPP  2112
             E   P+  LK  AE+L  KVCYH P
Sbjct  910   EARYPVNQLKINAEILTRKVCYHSP  984


 Score = 60.6 bits (173),  Expect = 5e-07
 Identities = 41/138 (29%), Positives = 59/138 (42%), Gaps = 0/138 (0%)
 Frame = +3/+3

Query  2160  ICLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*F  2339
             I L F RED+ +A  +    W+GG + D  S IS+      D    QPCLA  P+    +
Sbjct  1029  IHLCFLREDSGTAV*SALLGWDGGGSRDIYSAISK*TITRRDG*GPQPCLATPPNQRIRY  1208

Query  2340  RMLHRHFRKFLVHSLAGVKSDQRLRERGSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRD  2519
              +L  +F +  V  L    S   L  RG + L     D +P L*C  L  H +  +C + 
Sbjct  1209  GLLRCYFFQHFVCFLVRGTSSGHLWRRGPVPLSYPPGDGRPRL*CRGLWVHQVRGECHQS  1388

Query  2520  ITSGRLLTGARPNPATLG  2573
               +G  +   R      G
Sbjct  1389  TFAGEGIVFPRFEIGATG  1442


 Score = 52.3 bits (148),  Expect = 1e-04
 Identities = 41/123 (33%), Positives = 53/123 (43%), Gaps = 0/123 (0%)
 Frame = +2/+2

Query  2144  KTTNMYLSIFLARRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAA  2323
             + +N+Y S+F ARR R C       L  R   R  F+HI  +  + R    TTLLG  A 
Sbjct  1013  RGSNIYSSMFPARRFRNCCLIGASWLGRRRQSRHLFSHIEVNYHAERWLGSTTLLGDAAK  1192

Query  2324  RRNLI*NASSPFSQVPCSFTCWS*K*PTFTGER*LAPSFCGEGLKTAPMML*LAAPHNSP  2503
              +N I  AS  F    C F     +  T    R  AP       +TA MM  L    +S 
Sbjct  1193  PKNQIWTASLLFFPALCLFPGTRHEQWTSMATRSCAPFLSARRRETATMMSWLMGSPSSR  1372

Query  2504  KMP  2512
             +MP
Sbjct  1373  RMP  1381


>gi|6498173|dbj|AB016260.1|  Agrobacterium tumefaciens plasmid pTi-SAKURA, complete sequence
Length=206479

 Features in this part of subject sequence:
   tiorf195
   tiorf177

 Score = 37.5 bits (103),  Expect = 6e-04
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 0/48 (0%)
 Frame = +1/+1

Query  2233    VLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLF  2376
               VLA+++ PYR+++  +E+  V N   P + +    + CF+AI  S  F
Sbjct  180184  VLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF  180327


 Features in this part of subject sequence:
   tiorf195
   tiorf185

 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 0/70 (0%)
 Frame = -2/+3

Query  506     LLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGFFGYAD  327
                LY+Y+D     +C     L  N   G + T L PY    T  +V   L+  SG  G  +
Sbjct  192942  FLYVYLDEENYRICRQSMVLVSNAPDGLIATTLEPYSDSYTFRQVREQLQAFSGDGGRIN  193121

Query  326     PMRSAYFAAF  297
                 R+ + +++
Sbjct  193122  YSRNEHSSSY  193151


 Features in this part of subject sequence:
   tiorf195
   tiorf177

 Score = 30.5 bits (82),  Expect = 6e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
 Frame = +1/+1

Query  2395    KVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPE  2547
               K+T   G E     F R   +  PYD+VA G T F+++      P  S  E
Sbjct  180343  KITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDE  180495


>gi|5042179|emb|AJ237588.1|ATU237588  Agrobacterium tumefaciens Ti plasmid pTiC58 T-DNA region
Length=29524

 Score = 37.5 bits (103),  Expect = 6e-04
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 0/48 (0%)
 Frame = +1/+3

Query  2233   VLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLF  2376
              VLA+++ PYR+++  +E+  V N   P + +    + CF+AI  S  F
Sbjct  10158  VLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF  10301


 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 0/70 (0%)
 Frame = -2/+1

Query  506    LLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGFFGYAD  327
               LY+Y+D     +C     L  N   G + T L PY    T  +V   L+  SG  G  +
Sbjct  24346  FLYVYLDEENYRICRQSMVLVSNAPDGLIATTLEPYSDSYTFRQVREQLQAFSGDGGRIN  24525

Query  326    PMRSAYFAAF  297
                R+ + +++
Sbjct  24526  YSRNEHSSSY  24555


 Score = 30.5 bits (82),  Expect = 6e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
 Frame = +1/+3

Query  2395   KVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPE  2547
              K+T   G E     F R   +  PYD+VA G T F+++      P  S  E
Sbjct  10317  KITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDE  10469


>gi|16271968|gb|AE007926.2|  Agrobacterium tumefaciens str. C58 plasmid Ti, section 4 of 20 
of the complete sequence
Length=11336

 Score = 37.5 bits (103),  Expect = 6e-04
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 0/48 (0%)
 Frame = +1/+3

Query  2233  VLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLF  2376
             VLA+++ PYR+++  +E+  V N   P + +    + CF+AI  S  F
Sbjct  4590  VLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF  4733


 Score = 30.5 bits (82),  Expect = 6e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
 Frame = +1/+3

Query  2395  KVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPE  2547
             K+T   G E     F R   +  PYD+VA G T F+++      P  S  E
Sbjct  4749  KITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDE  4901


>gi|17744012|gb|AE009418.1|  Agrobacterium tumefaciens str. C58 Ti plasmid, section 1 of 21 
of the complete sequence
Length=10029

 Score = 37.5 bits (103),  Expect = 6e-04
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 0/48 (0%)
 Frame = +1/+1

Query  2233  VLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLF  2376
             VLA+++ PYR+++  +E+  V N   P + +    + CF+AI  S  F
Sbjct  6535  VLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF  6678


 Score = 30.5 bits (82),  Expect = 6e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
 Frame = +1/+1

Query  2395  KVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPE  2547
             K+T   G E     F R   +  PYD+VA G T F+++      P  S  E
Sbjct  6694  KITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDE  6846


>gi|4836559|gb|AF126445.1|AF126445  Agrobacterium tumefaciens plasmid pTiC58 agrocinopine synthase 
(a), B protein (b), C protein (c), C' protein (c'), and D 
protein (d) genes, complete cds
Length=8288

 Score = 37.5 bits (103),  Expect = 6e-04
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 0/48 (0%)
 Frame = +1/+1

Query  2233  VLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLF  2376
             VLA+++ PYR+++  +E+  V N   P + +    + CF+AI  S  F
Sbjct  6550  VLASSLPPYRTDIPAEELKNVLNSILPGAYSMPHAVSCFVAILPSKKF  6693


 Score = 30.5 bits (82),  Expect = 6e-04
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
 Frame = +1/+1

Query  2395  KVTNVYGREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPE  2547
             K+T   G E     F R   +  PYD+VA G T F+++      P  S  E
Sbjct  6709  KITTRGGAEEHFVVFSREENDIIPYDIVAVGKTLFSQSDEEFGLPNLSFDE  6861


>gi|3059178|dbj|D88013.1|  Rhodococcus erythropolis DNA for hydroxylase   2,3-dihydroxybiphenyl 
1,2-dioxygenase, complete cds
Length=4089

 Score = 32.2 bits (87),  Expect = 0.005
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 0/57 (0%)
 Frame = +2/+3

Query  425   RLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRR  595
             R   + +   L R R  S   +R G   +G P  L+R       HP  +R  A  RR
Sbjct  2469  RHDRHLRGNALPRQRVPSRSHQRAGYGGQGRPVHLVRHRSGNRRHPGCARHPACQRR  2639


 Score = 26.6 bits (70),  Expect = 0.005
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 0/34 (0%)
 Frame = +2/+3

Query  92    HTQLLLTSNSSAHRLTISRLQTCTRHASPTHQVR  193
             H +L+    +S HRL  SR Q C     P H +R
Sbjct  2271  HRRLVGCHGTSRHRLQGSRSQGCVCPRLPRHGLR  2372


 Score = 22.3 bits (57),  Expect = 0.005
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 0/25 (0%)
 Frame = +3/+2

Query  294   RKCSEVGAPHRIRVTEKT*CLPEPS  368
             R+C+  GAP R        C P  S
Sbjct  2390  RQCASTGAPRRCTSCRGRTCSPSES  2464


>gi|74055513|gb|CP000116.1|  Thiobacillus denitrificans ATCC 25259, complete genome
Length=2909809

 Features in this part of subject sequence:
   1-deoxy-D-xylulose 5-phosphate reductoisomerase
   peptidase M50, putative membrane-associated zinc metallop...

 Score = 35.8 bits (98),  Expect = 0.53
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 0/54 (0%)
 Frame = +3/+2

Query  1761    SRPETVSDWRQFPTPYFKWPWHLPFS*LSNSHHNGSQIAIPSTISTSRSHSSME  1922
               +R    +  R  PTP  +WP   P    S S     ++A P+TIS + +H S +
Sbjct  834221  ARSRLAASPRASPTPSMRWPGGAPTRSTSCSTPTTGRVASPTTISGAATHESAD  834382


 Features in this part of subject sequence:
   putative rubredoxin reductase

 Score = 34.5 bits (94),  Expect = 0.53
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 0/46 (0%)
 Frame = +3/+2

Query  2505     KCPRDITSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLK  2642
                +C R+  S R   G RP    L A SG R  RH     +P  R  +
Sbjct  2389850  RCARNARSRRARRGCRPGAPPLRAGSGVRAARHRDARRRPRNRPAR  2389987


 Features in this part of subject sequence:
   conserved hypothetical protein

 Score = 33.5 bits (91),  Expect = 0.53
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 0/59 (0%)
 Frame = +2/+3

Query  407    EGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYA  583
              E  *G+R AS+ ++ T    R  +S    RG AAR  P  +  Q P I S   R+   A
Sbjct  33474  EVM*GMRAASSSRS*TCRWVRFLTSAMTSRGAAARDVPLSMTPQRPRISSRRVRANTRA  33650


 Features in this part of subject sequence:
   putative LPS biosynthesis related glycosyltransferase

 Score = 30.5 bits (82),  Expect = 7.6
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 0/42 (0%)
 Frame = +3/-2

Query  2340    RMLHRHFRKFLVHSLAGVKSDQRLRERGSLHLLSAARD*KPP  2465
               R   +  R+ + H LAG    +R R R  L  LS AR   PP
Sbjct  781605  RPHRQRARRTVRHGLAGRLRRRRERARRELPALSGARPRDPP  781480


 Features in this part of subject sequence:
   conserved hypothetical protein

 Score = 29.9 bits (80),  Expect = 0.009
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 0/58 (0%)
 Frame = -2/-1

Query  2321     RLCGQARL*TRSISWRASSLRYG*IVVASTASIPNVMDCSFSTFCIFSRER*TNTCWS  2148
                R C   R   RS +WRA S+R G   +++       + CS +     +R       W+
Sbjct  1934647  RACWPCRTGIRSSAWRARSIRTGSCCISTPPRPSGCVRCSTARNGCSTRPNGNGAPWN  1934474


 Features in this part of subject sequence:
   Putative diguanylate cyclase (GGDEF domain)

 Score = 27.2 bits (72),  Expect = 5.1
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 0/44 (0%)
 Frame = +2/-1

Query  461      RSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLR  592
                R RA       R  A RG P     Q  S    P R RV A  R
Sbjct  2707084  RDRARDHARPHRTQARRGGPAGERAQVSSAGREPLRRRVAARHR  2706953


 Features in this part of subject sequence:
   conserved hypothetical protein

 Score = 26.6 bits (70),  Expect = 0.009
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 0/43 (0%)
 Frame = -2/-2

Query  2618     TAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCV  2490
                T A  + PS P   G    R   G+G + A R  P A    C+
Sbjct  1934850  TGAARLQPSQPEEHGATRVRAAPGAGPQRARRAPPPAGAALCL  1934722


 Features in this part of subject sequence:
   Putative diguanylate cyclase (GGDEF domain)

 Score = 26.2 bits (69),  Expect = 5.1
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 0/60 (0%)
 Frame = +1/-3

Query  253      SSICSFSLMTRPGKENAAK*ALRIGSA*PKKPDACLSPLLTSSRVTSCWYGGRLVRSAPC  432
                ++  +F   +RP     +    R  S  P+KP         +SR  SC    R   S PC
Sbjct  2707253  TTTSAFPKRSRPRSTARSPWCSRPRSRWPRKPSCRRRRASATSRRASCRNSMRAAPSRPC  2707074


 Features in this part of subject sequence:
   conserved hypothetical protein

 Score = 22.6 bits (58),  Expect = 0.009
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 0/19 (0%)
 Frame = -3/-2

Query  2488     CRKLQHHRGGFQSLAAERR  2432
                C +L H RG ++ L   RR
Sbjct  1934727  CLRLSHARGRYRRLGLARR  1934671


 Features in this part of subject sequence:
   putative LPS biosynthesis related glycosyltransferase

 Score = 22.3 bits (57),  Expect = 7.6
 Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 0/34 (0%)
 Frame = +1/-2

Query  2443    RRGTENRPYDVVACGTTQFTKNALGISRPAASSP  2544
               RR    RP  +      +    ALG   PAA  P
Sbjct  781455  RRAAARRPPPLSPARRRRARTRALGPQTPAAGRP  781354


>gi|84619188|emb|AM156932.1|  Streptomyces steffisburgensis cluster for steffimycin biosynthesis, 
strain NRRL 3193
Length=42877

 Score = 37.5 bits (103),  Expect = 0.021
 Identities = 23/72 (31%), Positives = 26/72 (36%), Gaps = 0/72 (0%)
 Frame = +2/+2

Query  467  RASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHRCLSHPPL*  646
            R      RR G   R  PT   R        P R R     RRSSC     R + H P  
Sbjct  440  RPRGPWPRRGGGGRRRRPTRACRTSSPRRRTPGRRRTAGGRRRSSCAWCTWRRVRHRP*R  619

Query  647  A*KRENTGRLQP  682
              +R  +GR  P
Sbjct  620  CPRRPRSGRAHP  655


 Score = 31.5 bits (85),  Expect = 0.021
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 0/36 (0%)
 Frame = +2/+1

Query  2486   APHNSPKMPSGYHVRPPPHRSQT*PCDSRGLIRKAR  2593
              A   +P+ P  + V P PHR+ T P  SR L R  R
Sbjct  41587  ARRPTPRSPDVHGVDPHPHRAPTPPSHSRRLRRLQR  41694


 Score = 28.9 bits (77),  Expect = 0.021
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 0/56 (0%)
 Frame = +1/+3

Query  1885   PRFQPVDLTPAWSQINLFEGIRFAFAIYSRDYSKPLLHFQKRWALAVLDLKENSPP  2052
              PR   VDL P   +       RFA A Y RD   P     +R+  A L+   +  P
Sbjct  14859  PRIALVDLNPLVLKKAATRLRRFAPATYQRDVLSPFELGGERYESAGLNFLLHCLP  15026


>gi|89343559|gb|CP000267.1|  Rhodoferax ferrireducens DSM 15236, complete genome
Length=4712337

 Features in this part of subject sequence:
   FAD linked oxidase-like

 Score = 44.7 bits (125),  Expect = 0.027
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 0/56 (0%)
 Frame = +2/+2

Query  2225    WRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*NASSPFSQVPCSFTCWS  2392
               W+PCW ++ +   +S P+ RC      +  +AA   L * A    + V C+  CW+
Sbjct  496718  WKPCWLKKASAWPSSRPTLRCQASVQAVPPSAAWWPLA*AARPVPASVACATMCWA  496885


 Features in this part of subject sequence:
   glycine cleavage system T protein

 Score = 38.8 bits (107),  Expect = 1.7
 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
 Frame = -3/+2

Query  520      RWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPR  401
                RW +GCC +TST RR         C T G  AHS     R
Sbjct  3330782  RWFSGCCKNTSTTRRRNGGCSPKTCWTFGTGAHSRARTHR  3330901


>gi|77968738|gb|CP000152.1|  Burkholderia sp. 383 chromosome 2, complete sequence
Length=3587082

 Features in this part of subject sequence:
   Major facilitator superfamily (MFS_1) transporter

 Score = 38.8 bits (107),  Expect = 0.26
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 0/55 (0%)
 Frame = +2/+1

Query  437     NCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSS  601
               +C+AR  HR+R   + SR R +A    P    R  PS  S   R+   A  RR S
Sbjct  107590  SCRARRPHRARMPRTSSRARRSAQPASPNTARRARPSRSSAGTRAPCRAGSRRGS  107754


 Features in this part of subject sequence:
   FAD dependent oxidoreductase

 Score = 36.2 bits (99),  Expect = 0.26
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 0/45 (0%)
 Frame = +3/+2

Query  2514    RDITSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLKPT  2648
               R   +      ARP  A  G+ SG RG R  ACC +   R+  PT
Sbjct  910916  RGAATSTSACAARPTSAATGSASGCRGSRGTACCRRSPVRARWPT  911050


 Features in this part of subject sequence:
   Alpha-2-macroglobulin-like large extracellular alpha-heli...

 Score = 29.5 bits (79),  Expect = 7.4
 Identities = 17/72 (23%), Positives = 24/72 (33%), Gaps = 0/72 (0%)
 Frame = +3/-2

Query  2139    SRKRPTCICLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLAAQ  2318
               SR+   C   + +R     A   +H    G RAG +              PC + C  A 
Sbjct  569783  SRRASRCSTRASARSRRRCARLPLHRPSPGSRAGRSRPRTCRDRDRTRHGPCRRSCRPAA  569604

Query  2319    PHGGT*FRMLHR  2354
                      R +HR
Sbjct  569603  SSCSPPSRGVHR  569568


 Features in this part of subject sequence:
   outer membrane lipoprotein

 Score = 25.9 bits (68),  Expect = 0.065
 Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 0/52 (0%)
 Frame = +3/-2

Query  2142   RKRPTCICLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCS  2297
              R R TC   S  R    S   +     N GR+    + IS    PP  AP +
Sbjct  75296  RNRATCNSNSRIRTRRRSRTISTATSSNTGRSRMTSTAISSSNTPPRTAPST  75141


 Features in this part of subject sequence:
   outer membrane lipoprotein

 Score = 25.6 bits (67),  Expect = 0.065
 Identities = 22/90 (24%), Positives = 29/90 (32%), Gaps = 0/90 (0%)
 Frame = +1/-1

Query  1801   RRILNGPGTCLFRNYPTHITMDPKLLFLPRFQPVDLTPAWSQINLFEGIRFAFAIYSRDY  1980
              RR    PG    R    H+   P    L  F  +  +       + E +  A  I  R  
Sbjct  75624  RRFRAPPGRRFTRQQTLHVVTRPHRTRLRPFLILTPSSPPVPAFVGEPVADAGNIMMRMP  75445

Query  1981   SKPLLHFQKRWALAVLDLKENSPPIYILKQ  2070
              S   + F    A+A L L     P Y   Q
Sbjct  75444  STKTVLFASLVAVAALPLTACVAPGYYGAQ  75355


 Features in this part of subject sequence:
   outer membrane lipoprotein

 Score = 24.3 bits (63),  Expect = 0.065
 Identities = 11/29 (37%), Positives = 12/29 (41%), Gaps = 0/29 (0%)
 Frame = +1/-3

Query  2380   HLLELKVTNVYGREVACTFFLRRGTENRP  2466
              H LE      +GR V C    RR    RP
Sbjct  75139  HGLEHPAGQRFGRPVGCRRHRRRCAGRRP  75053


 Features in this part of subject sequence:
   Alpha-2-macroglobulin-like large extracellular alpha-heli...

 Score = 23.3 bits (60),  Expect = 7.4
 Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 0/33 (0%)
 Frame = +1/-2

Query  2446    RGTENRPYDVVACGTTQFTKNALGISRPAASSP  2544
               RG   R     +CGTT     A    R  AS P
Sbjct  569582  RGVHRRSDSPASCGTTATPGAASASPRRGASPP  569484


>gi|83574254|gb|CP000230.1|  Rhodospirillum rubrum ATCC 11170, complete genome
Length=4352825

 Features in this part of subject sequence:
   hypothetical protein

 Score = 30.2 bits (81),  Expect = 0.080
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 0/57 (0%)
 Frame = +2/+3

Query  176      PTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKN  346
                P H+ R  A    RGR +  FP+S + P   +      G    R RR A  P  R++
Sbjct  3638235  PGHRRRRVACADSRGRRARWFPVSPVPPPFPAGPASRPGTTTTRRRRPAPPPPGRRS  3638405


 Features in this part of subject sequence:
   hypothetical protein

 Score = 29.9 bits (80),  Expect = 0.080
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 0/55 (0%)
 Frame = +2/+3

Query  458      HRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
                H+S    + +RRRG   RG      R     ++ PA S  +   RR      AH+
Sbjct  3638484  HQSPGPRASARRRGLLWRGRRRAAARGLARANAPPASSTAFPRDRRRRRRRAAHK  3638648


>gi|41400296|gb|AE016958.1|  Mycobacterium avium subsp. paratuberculosis str. k10, complete 
genome
Length=4829781

 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.8 bits (107),  Expect = 1.7
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 0/49 (0%)
 Frame = +2/+3

Query  458      HRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSC  604
                HR R +  G  RRG+  R P  L  R   +  + PAR R     RR+ C
Sbjct  4142181  HRWRRAVRGPGRRGSGTRRPDPLARRGRSAALASPARGRAPNRARRARC  4142327


 Features in this part of subject sequence:
   FadE13
   hypothetical protein

 Score = 36.5 bits (100),  Expect = 0.14
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 0/40 (0%)
 Frame = -3/-1

Query  568     SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGP  449
               S RV   +   T+K   WA GC  +TST+RR C  S++ P
Sbjct  946263  SDRVSPIKPGSTRKPRGWANGCAAATSTSRRACCESVDHP  946144


 Features in this part of subject sequence:
   hypothetical protein

 Score = 36.2 bits (99),  Expect = 3.1
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 0/55 (0%)
 Frame = +3/-2

Query  2148     RPTCICLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCSQPCLA  2312
                RP C C +  R        ++       R G    T S R RP   APC++ C A
Sbjct  2720348  RPRCTCRAPRRAGPRRRPASMSCC*PTSRRGPRGRTSSARPRPSSTAPCTRWCAA  2720184


 Features in this part of subject sequence:
   hypothetical protein

 Score = 36.2 bits (99),  Expect = 2.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 0/37 (0%)
 Frame = +2/-1

Query  419      GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLL  529
                G   ++ C ART  R+RA +  +RRR    R PPTL 
Sbjct  1683846  GRPRSAGCAARTPRRNRAGNPWARRRSAQHRPPPTLF  1683736


 Features in this part of subject sequence:
   hypothetical protein

 Score = 35.8 bits (98),  Expect = 0.14
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 0/45 (0%)
 Frame = -3/-3

Query  2371     RNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDMVESLSP  2237
                R  R+WR    ++ P CGC     C     PGG AR       +P
Sbjct  2725504  RPARRWRTRRGHRRPRCGCGRLPACPAARGPGGPARPARRSRCAP  2725370


 Features in this part of subject sequence:
   hypothetical protein

 Score = 35.5 bits (97),  Expect = 2.5
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 0/40 (0%)
 Frame = +2/-2

Query  2183     RCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTT  2302
                RCR+  R +P     R  W  R N IGA+  S RC+  T+
Sbjct  1582751  RCRRSTRYSPAPAATRREWTSRCNGIGATCTSARCTPSTS  1582632


 Features in this part of subject sequence:
   Gcp

 Score = 35.2 bits (96),  Expect = 3.1
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 0/57 (0%)
 Frame = +2/-2

Query  425      RLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRR  595
                R  +  +A    R  A   G RRR    R P TL  ++ P     PAR+R +   RR
Sbjct  4732112  RTRAAARAGRRRRPGARPGG*RRRTAPPRPPNTLWPQRLPPAGHRPARARWWPRRRR  4731942


 Features in this part of subject sequence:
   FabG5_1

 Score = 35.2 bits (96),  Expect = 0.14
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 0/67 (0%)
 Frame = -3/-2

Query  2599     RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGGFQSLAAERRCKLP  2420
                RPPR   + PR +  G    RR P    R   W   W R+ +       + AA R C+  
Sbjct  3069701  RPPRGRSRTPRRS*PGCPARRRCPPRAPRPVRWPGGWWRRPRRRPPRAAAGAAGRTCRYR  3069522

Query  2419     LSRKRWS  2399
                +  +R S
Sbjct  3069521  VPAQRLS  3069501


 Features in this part of subject sequence:
   hypothetical protein

 Score = 25.2 bits (66),  Expect = 0.93
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 0/46 (0%)
 Frame = +3/-1

Query  2229     GRAGDNDSTISERARPPGDAPCSQPCLAAQPHGGT*FRMLHRHFRK  2366
                GR G + +  + RA PP     +    +AQPH     R   ++ R+
Sbjct  3667779  GRVGRHHAGSALRAVPPRVEDSALEEQSAQPHHRDRLRHQGQNRRR  3667642


 Features in this part of subject sequence:
   hypothetical protein

 Score = 23.6 bits (61),  Expect = 0.93
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 0/23 (0%)
 Frame = +2/-3

Query  2486     APHNSPKMPSGYHVRPPPHRSQT  2554
                AP   P  P  +  RPP  RS +
Sbjct  3667666  APRAKPPSPPSWATRPPRPRSSS  3667598


 Features in this part of subject sequence:
   hypothetical protein

 Score = 22.3 bits (57),  Expect = 0.93
 Identities = 7/18 (38%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +3/-3

Query  2610     CCSKPEERSLKPT*TPPA  2663
                CC  P   + +P+  PPA
Sbjct  3667516  CCGWPGPSTRRPSSWPPA  3667463


>gi|5360065|gb|AF159689.1|AF159689  Myxococcus xanthus DnaK suppressor protein DskA (dskA) gene, 
partial cds; serine/threonine kinase PKN3 (pkn3) gene, complete 
cds; and unknown genes
Length=3824

 Score = 35.5 bits (97),  Expect = 0.14
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 0/43 (0%)
 Frame = +2/+2

Query  2432  PSFCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*P  2560
             P   G    + P   * AAP +SP++P G+    PPHR +  P
Sbjct  3236  PRRRGSSSHSGPGRW*AAAPPSSPRVPHGHRRASPPHRRRPAP  3364


 Score = 31.2 bits (84),  Expect = 0.14
 Identities = 16/63 (25%), Positives = 22/63 (34%), Gaps = 0/63 (0%)
 Frame = +2/+1

Query  374   PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSID  553
             P    HH G       +R     + R  HR     SG+  RG   R P   + R    + 
Sbjct  1738  PQAREHHGGAAAQRARLRQGVGLRHREDHRLHGRRSGAHPRGLRVRHPRIHVARAGAGLA  1917

Query  554   SHP  562
             + P
Sbjct  1918  ARP  1926


>gi|61661472|gb|AY943953.1|  Streptomyces sp. FQ1 plasmid pFP1, complete sequence
Length=39360

 Score = 39.1 bits (108),  Expect = 0.25
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 0/101 (0%)
 Frame = -3/-3

Query  502   CTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPRTSMM*LSMRSIEGSGKHQVFSVTRIL  323
             C S S+  R CS        T GC + ++ +   T    LS             S +  L
Sbjct  3325  CCSVSSTTRSCSGCTWCGIGTAGCASGAAASSSDTMRSSLSRSRESAYAATARSSSSWSL  3146

Query  322   CGAPTSLHFLSLGVSSS*MSRWS*LRQRESV*HSTSMPAPS  200
             C +P      SL  +S+   RW  +R RES  +     AP+
Sbjct  3145  CASPRRRRVSSLSTTSAGSHRWVAIRSRESAGYRLFASAPT  3023


 Score = 29.9 bits (80),  Expect = 0.25
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 0/34 (0%)
 Frame = -3/-1

Query  2599   RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*  2498
              R PR P   PR+      P RR P    RG  W*
Sbjct  25560  RRPRRPGPRPRLGPPRRPPGRRPPRRARRGRPW*  25459


>gi|55420455|gb|AY772007.1|  Nocardioides sp. JS614 putative PAPS reductase gene, partial 
cds; putative argininosuccinate lyase, putative 1-aminocyclopropane-1-carboxylate 
deaminase, putative adenylosuccinate lyase, 
putative phosphosulfolactate synthase, putative oxidoreductase/dehydrogenase, 
putative short-chain dehydrogenase, 
putative acyl-CoA transferase, putative acyl-CoA synthetase, 
epoxyalkane: coenzyme M transferase (etnE), probable alkene 
monooxygenase beta subunit (etnA), probable alkene monooxygenase 
effector (etnB), probable alkene monooxygenase alpha subunit 
(etnC), probable alkene monooxygenase reductase, hypothetical 
proteins, putative dimethylsulfoxide reductase, hypothetical 
protein, putative TraA conjugation protein, hypothetical 
protein, putative ParB partitioning protein, and hypothetical 
proteins genes, complete cds; putative DNA integrase/recombinase 
gene, partial cds; and unknown gene
Length=34814

 Score = 34.2 bits (93),  Expect = 0.26
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 0/52 (0%)
 Frame = +3/-1

Query  2142   RKRPTCICLSFSREDAESAEGTIHYIWNGGRAGDNDSTISERARPPGDAPCS  2297
              R+RP C   S SR    S+ GT    W G  +G      + R+R P  + CS
Sbjct  14939  RRRPGCPSHSPSRHSHASSPGTGPCPWGG*CSGRGTWGRAWRSRTPSRSACS  14784


 Score = 30.2 bits (81),  Expect = 0.26
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 0/52 (0%)
 Frame = +2/-3

Query  419    GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSR  574
              G RLA+        R R ++  SRR G   R P    L +       PAR R
Sbjct  25341  GARLAARRLRHAQRRHRPTALDSRRTGATGRRPALGCLPRPARAPGRPARRR  25186


 Score = 28.9 bits (77),  Expect = 0.26
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
 Frame = +2/-2

Query  2510  PSGYHVRPPPHRSQT*PCDSRGLIRKARRAS  2602
             P  + VR  P RS+T PC ++GL  +  R S
Sbjct  1621  PQSW*VRATPWRSRTHPCSTKGLDSQTLRMS  1529


>gi|8050835|gb|AF263912.1|AF263912  Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster, 
complete sequence
Length=123580

 Score = 33.2 bits (90),  Expect = 0.34
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
 Frame = +2/+1

Query  449   RTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPAR  568
             RT  R R   +G RRR  A   P +   R  P++  HP R
Sbjct  7279  RTAARGRRDRAGRRRRQHAGHRPRSARRRTGPALRPHPGR  7398


 Score = 33.2 bits (90),  Expect = 0.34
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
 Frame = +3/+1

Query  2514   RDITSGRLLTGARPNPATLGA*SGRRGGR  2600
              R +   RL +G RP PA  GA  GRR GR
Sbjct  22531  RAVAGRRLHSGRRPRPAHAGAARGRRDGR  22617


 Score = 29.9 bits (80),  Expect = 0.34
 Identities = 9/21 (42%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
 Frame = +2/+3

Query  2225   WRPCWRQRFNHIGASSPSRRC  2287
              WR CWR+   H   S+ +R C
Sbjct  18378  WRTCWRRSTAHSSRSARTRCC  18440


>gi|60650890|gb|AY787762.1|  Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic 
gene cluster, partial sequence
Length=127559

 Score = 39.8 bits (110),  Expect = 0.46
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 0/48 (0%)
 Frame = -3/+3

Query  2329   PPCGCAAKQGCEHGASPGGRARSDMVESLSPARPPFQM*WIVPSALSA  2186
              PPC C  ++GC    SP   + +    S  PAR P +    VPSA SA
Sbjct  50418  PPCSCRGRRGCTRHESPPPPSNATNSASPYPARQPGRSSAAVPSATSA  50561


 Score = 29.9 bits (80),  Expect = 0.46
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 0/67 (0%)
 Frame = -3/+2

Query  595    TPQMSVNP*SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSS  416
              +P+    P +S VR +         R  T CC+S++T       S     ++    A ++
Sbjct  54962  SPKPHAAPSTSPVRSHSKPTCSAAARTTTPCCSSSTTPPATEPPSRSSYAISPTPTAPAA  55141

Query  415    PTFPRTS  395
              P  PRTS
Sbjct  55142  PATPRTS  55162


>gi|836905|gb|U18082.1|SPU18082  Streptomyces peucetius daunorubicin and doxorubicin resistance 
determinant (drrAB) gene, partial cds, and aklavinone C-11 
hydroxylase (dnrF) gene, complete cds
Length=2201

 Score = 34.2 bits (93),  Expect = 0.48
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 0/45 (0%)
 Frame = -3/-2

Query  2485  RKLQHHRGGFQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR  2351
             R  +  RGG ++ A  R C+      R +   PAS   R  R+WR
Sbjct  1453  RVTRRRRGGTRATAPPRSCRGAARPPRRAARRPASRPRRTRRRWR  1319


 Score = 23.9 bits (62),  Expect = 0.48
 Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 0/41 (0%)
 Frame = -2/-2

Query  2663  CRGSSSRL*ASFFRFTAAGFMTPSSPS*SGPESRRVRSGSG  2541
             CR   SR      R    G   P S     P  RR  SGSG
Sbjct  1657  CRPVRSRRGVRGSRGARTGVADPRSARGRRPRRRRRWSGSG  1535


>gi|54013472|dbj|AP006618.1|  Nocardia farcinica IFM 10152 DNA, complete genome
Length=6021225

 Features in this part of subject sequence:
   putative inositol monophosphatase

 Score = 37.1 bits (102),  Expect = 0.50
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 0/30 (0%)
 Frame = +1/-1

Query  796      YRSTNLLINGCGCRCSTSPRCANIEGTPAC  885
                +RS +    GC CR ST+PRCA    TP C
Sbjct  3592365  HRSPSPRRPGCMCRVSTAPRCATTGPTPTC  3592276


 Features in this part of subject sequence:
   putative transporter

 Score = 35.5 bits (97),  Expect = 9.8
 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 0/70 (0%)
 Frame = -3/-1

Query  2434     RCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDM  2255
                RC  P SR RW  ++ +  *+R       +  +  PP  CA +  C    S      +  
Sbjct  2939076  RCSAPRSRSRWPRMSVSRR*SRR*SSGYRAARSSSPPTRCARRSRCCCPPSTRSGRSTRS  2938897

Query  2254     VESLSPARPP  2225
                  S    RPP
Sbjct  2938896  SSSSKRPRPP  2938867


 Features in this part of subject sequence:
   hypothetical protein

 Score = 34.8 bits (95),  Expect = 0.50
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 0/83 (0%)
 Frame = +3/-2

Query  1761     SRPETVSDWRQFPTPYFKWPWHLPFS*LSNSHHNGSQIAIPSTISTSRSHSSMEPDKPIR  1940
                + P   + WR+  +P  +W    P    +  +    + A  +  S +R+     P    R
Sbjct  2411555  TTPARAAAWRRSSSPACRWTAPTPNVCAATPNSRSPRSAPTARPSRTRTTPGARPPGRAR  2411376

Query  1941     GDPICFCNL*P*L*QTPPAFPET  2009
                    C     P    TP  FPE+
Sbjct  2411375  SPSACPACASPTAPATPAPFPES  2411307


 Features in this part of subject sequence:
   hypothetical protein

 Score = 34.2 bits (93),  Expect = 9.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 0/37 (0%)
 Frame = -3/-1

Query  532     KKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAH  422
               ++  RW   CC   S  RR  +A +  PC + G +AH
Sbjct  939459  RRAPRW*DPCCRRPSARRRPTTACLCRPCRSAGRRAH  939349


 Features in this part of subject sequence:
   hypothetical protein
   putative glycosyltransferase

 Score = 33.8 bits (92),  Expect = 0.50
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 0/51 (0%)
 Frame = +2/-1

Query  377      HRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLL  529
                H +  HA   E   GV  A    A  L    AS+SGSRR  T  + P   L
Sbjct  4435188  HHQDLHASPSEAGPGVPAAGGRGASALGTGGASASGSRRASTPGKNPSAAL  4435036


 Features in this part of subject sequence:
   putative transcriptional regulator

 Score = 30.5 bits (82),  Expect = 2.1
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 0/59 (0%)
 Frame = -3/+1

Query  2437     RRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARS  2261
                RR   P  R RW    P    +R  R+ R +   +  P    + +    G  PG R R+
Sbjct  3216088  RRRGCPRPRCRWPTAGPGRAGSRGPRRPRTAAAGRSCPRRAGSSRPARAGCGPGSRTRA  3216264


 Features in this part of subject sequence:
   hypothetical protein

 Score = 29.2 bits (78),  Expect = 8.4
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 0/52 (0%)
 Frame = -3/+3

Query  1180     GRIAVSLRRNGGHVRAFKRPYNKLPAVLLWCRQA*RGV*LDKVAPFRSINKG  1025
                GR   S RR GG VRA+  P    P      R A RG    + A +R+   G
Sbjct  2397114  GRTTGSGRRRGGRVRAWPPPAAAPPVPRGPARTARRGGRTRRRARWRAGGPG  2397269


 Features in this part of subject sequence:
   putative dehydrogenase

 Score = 27.6 bits (73),  Expect = 4.7
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 0/56 (0%)
 Frame = -3/+2

Query  568      SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAHSSPTFPR  401
                S R R  R    ++  R    C  S   +RR  S +    C    C  + +P  PR
Sbjct  3739133  SGRRRCRRAAAARRPVRARGRCPPSRRGSRRRRSGAAARSCARPRCATNGAPPAPR  3739300


 Features in this part of subject sequence:
   putative ATP-dependent DNA helicase

 Score = 27.6 bits (73),  Expect = 6.9
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 0/40 (0%)
 Frame = -3/+3

Query  544      WILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKA  425
                W      G  +  CC +++T    CSA+M  P  T  C +
Sbjct  4344033  WAARTSVGASSAHCCPASTTCNMACSATMVLPDPTSPCNS  4344152


 Features in this part of subject sequence:
   putative dehydrogenase

 Score = 25.9 bits (68),  Expect = 4.7
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 0/39 (0%)
 Frame = -1/+2

Query  429      RRTPHQPSPVPA*CDSR*GQ*RAQASIRFFRLRGSYAER  313
                R  P++P+P P  C + *   R + + R  R R   A R
Sbjct  3739319  RAPPNRPAPAPRRCPTG*AHRRWRRTSRRSRTRRPPAGR  3739435


 Features in this part of subject sequence:
   putative ATP-dependent DNA helicase

 Score = 25.2 bits (66),  Expect = 6.9
 Identities = 16/55 (29%), Positives = 19/55 (34%), Gaps = 0/55 (0%)
 Frame = -1/+1

Query  363      AQASIRFFRLRGSYAERLLRCIFFPWACHQAE*ADGANFDKGKVSDIRPLCQHPA  199
                A A  R  R R   A    RC   P AC +   A G    +      R  C+  A
Sbjct  4344232  ATARRRLPRCRRPAAGTGARCARTPRACVRPAPAAGPAPRRSAAGPGRDRCRRGA  4344396


 Features in this part of subject sequence:
   putative transcriptional regulator

 Score = 24.3 bits (63),  Expect = 2.1
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 0/15 (0%)
 Frame = -2/+2

Query  2576     GPESRRVRSGSGEEA  2532
                G E RRVR+G GE A
Sbjct  3215954  GAEGRRVRTGGGEGA  3215998


 Features in this part of subject sequence:
   hypothetical protein

 Score = 23.3 bits (60),  Expect = 8.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 0/41 (0%)
 Frame = -1/+3

Query  948      TEPIPSRGSLSFKPNK*KQLKAGRCPFYIRTTRRRGASTAA  826
                T P P+  + +    +  +  A  CP   R +R R A +AA
Sbjct  2397348  TAPRPAAATGARTRGRRDRPGAPGCPGRARRSRSRPAESAA  2397470


>gi|57546753|dbj|BA000030.2|  Streptomyces avermitilis MA-4680 genomic DNA, complete genome
Length=9025608

 Features in this part of subject sequence:
   putative ABC transporter ATP-binding protein

 Score = 37.8 bits (104),  Expect = 0.54
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 0/62 (0%)
 Frame = +3/-2

Query  2475     CSLRHHTIHQKCPRDITSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLKPT*T  2654
                C  R        PRD  SGR     RP+  T  A   RR GR  A  S+P+  +      
Sbjct  3426689  CRRRTGRRRPAAPRDARSGRRRAAPRPHARTRSAPRSRRSGRPPARPSRPDRSAAPGPGP  3426510

Query  2655     PP  2660
                PP
Sbjct  3426509  PP  3426504


 Features in this part of subject sequence:
   hypothetical protein

 Score = 37.1 bits (102),  Expect = 0.54
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 0/66 (0%)
 Frame = +2/-3

Query  443      KARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
                +AR  HR R+ ++G RRR      P T  LR+ P         R  A   R   V L   
Sbjct  7470718  EARAPHRPRSLAAGDRRRPPVGVHPRTHPLRRVPHHQLDDPARRR*AQTLRVPAVLLHQC  7470539

Query  623      CLSHPP  640
                   HPP
Sbjct  7470538  VRRHPP  7470521


 Features in this part of subject sequence:
   hypothetical protein

 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 0/53 (0%)
 Frame = +2/-2

Query  380      RESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQ  538
                R    AG GEGW G  +  N   R  HR+R     S RR T  +G  T+ +R 
Sbjct  3865706  RGRRGAGQGEGWQGPHVHRNRGRRRHHRARCRRGRSGRRRTRRQGRRTVAVRH  3865548


 Features in this part of subject sequence:
   putative large secreted protein

 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 0/64 (0%)
 Frame = +2/-2

Query  449     RTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHRCL  628
               R  HR    ++G RR     RG   L+  + P+      RSR +A  RR  C     R  
Sbjct  236027  RRGHRRMPVTTGRRRCRRPVRGRCPLVQVRSPTTCPSSCRSRRWAQRRRCHCRTTRSRST  235848

Query  629     SHPP  640
               + PP
Sbjct  235847  AVPP  235836


 Features in this part of subject sequence:
   putative ABC transporter ATP-binding protein

 Score = 36.2 bits (99),  Expect = 3.3
 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 0/53 (0%)
 Frame = -3/+1

Query  2626     SGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHH  2468
                SG L +A  RP R    A RV   G    RRRPD  SRG        R+ Q H
Sbjct  3426538  SGRLGRAGGRPDRRDRGALRVRAWGRGAARRRPDRASRGAAGRRRPVRRRQDH  3426696


 Features in this part of subject sequence:
   putative modular polyketide synthase

 Score = 35.8 bits (98),  Expect = 3.3
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 0/70 (0%)
 Frame = -3/+1

Query  2437     RRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSD  2258
                RRC     R RW    PA+   R+  +   S     PP     ++ C   A   G AR+ 
Sbjct  8780809  RRCPAGPRRPRWRRRRPATRAARSAGRRPRSWARTRPPGRGRRRRACRRRAPAAGSARTT  8780988

Query  2257     MVESLSPARP  2228
                     +  RP
Sbjct  8780989  RRPGPATRRP  8781018


 Features flanking this part of subject sequence:
   158 bp at 5' side: putative solute-binding dependent transport lipoprotein
   28 bp at 3' side: putative proline iminopeptidase

 Score = 29.2 bits (78),  Expect = 2.4
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 0/57 (0%)
 Frame = -2/+1

Query  2561     RVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQATSLP*TLVTFN  2391
                RVRSG    A GR + R     C V QA        V R   +     L  T++T++
Sbjct  1047574  RVRSGRSRRAGGRTLARWTAGTCAVEQAAPHLVTVVVDRTGAECGWYGLGHTVLTWS  1047744


 Features in this part of subject sequence:
   putative sensor-like histidine kinase
   hypothetical protein

 Score = 29.2 bits (78),  Expect = 3.6
 Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 0/113 (0%)
 Frame = -2/+2

Query  2660     RGSSSRL*ASFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQ  2481
                R S +   A   R  A     PS+P    P SRR  +  G     R  PR+         
Sbjct  2653943  RSSPTTTPARPARCAAGSAGPPSAPRPPRPPSRRRTAPPGPPTRTRSAPRSRSSRPPWSA  2654122

Query  2480     ATTS*GRFSVPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSV  2322
                 T + G    PR R +    +   T  T  +S      + +   +  +S   V
Sbjct  2654123  HTGTAGPAPRPRPRSRHPTRTTRTTRATRATSVIRTTRVIRTTSRKERSSEHV  2654281


 Features in this part of subject sequence:
   putative solute-binding dependent transport lipoprotein

 Score = 25.2 bits (66),  Expect = 2.4
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 0/31 (0%)
 Frame = -3/+2

Query  2626     SGLLQQAS*RPPRLPDQAPRVAGLGLAPVRR  2534
                +G LQ+    P R+  + P VA +G  P RR
Sbjct  1047374  AGHLQRPGVGPARVTAREPPVATVGNVPTRR  1047466


 Features in this part of subject sequence:
   hypothetical protein

 Score = 24.6 bits (64),  Expect = 3.6
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 0/33 (0%)
 Frame = -3/+1

Query  2326     PCGCAAKQGCEHGASPGGRARSDMVESLSPARP  2228
                P  CA +Q    G+S   R R     + SP+ P
Sbjct  2654314  PPNCAPQQPTSRGSSTDSRPRPRASSTPSPSPP  2654412


>gi|56676665|gb|CP000031.1|  Silicibacter pomeroyi DSS-3, complete genome
Length=4109442

 Features in this part of subject sequence:
   DNA-binding protein, putative

 Score = 40.1 bits (111),  Expect = 0.67
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 0/59 (0%)
 Frame = +3/+1

Query  2463     PL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSL  2639
                P  C       +  +CP    SGR   G RPNP   GA    R GRH A   +  +R L
Sbjct  2733628  PPRCAGSDLQLLRCRCPHPAGSGRCHPGIRPNPVGAGAGRVFRPGRHPAGRGRFSKRLL  2733804


 Features in this part of subject sequence:
   H+-transporting two-sector ATPase, flagellum-specific

 Score = 38.8 bits (107),  Expect = 0.66
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 0/69 (0%)
 Frame = +3/-3

Query  1827    LPFS*LSNSHHNGSQIAIPSTISTSRSHSSMEPDKPIRGDPICFCNL*P*L*QTPPAFPE  2006
               LP    S +      I +PST +TS      +        PIC C   P*+  TPPA P 
Sbjct  199708  LPSDTPSGALSGSMLIVLPSTCNTSPPRDGPKLRFNSTRSPICACRARP*IWITPPATPV  199529

Query  2007    TMGSCSARF  2033
               T  +C  R 
Sbjct  199528  TRPTCRTRL  199502


 Features in this part of subject sequence:
   conserved hypothetical protein

 Score = 34.8 bits (95),  Expect = 0.66
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 0/46 (0%)
 Frame = +2/-1

Query  464      SRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSS  601
                +R ++SG RRRG+A R PP       P   + P R   Y H R  S
Sbjct  1533861  ARTAASGCRRRGSARRCPPPPAGGPVPRTGA*PRRPCPYRHRRPGS  1533724


>gi|85772941|gb|CP000251.1|  Anaeromyxobacter dehalogenans 2CP-C, complete genome
Length=5013479

 Features in this part of subject sequence:
   Beta-ketoacyl synthase, Acyl transferase subunit

 Score = 40.1 bits (111),  Expect = 0.67
 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 0/68 (0%)
 Frame = +2/-1

Query  2174     LARRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARRNLI*NASS  2353
                +A  CR C    P      PCWR R     +SSP R  +         +ARR    +  S
Sbjct  4498013  IAAPCRSCSGGRPTRASRPPCWRSRTATTRSSSPRRSRATCACSAPSRSARRRWRSSPPS  4497834

Query  2354     PFSQVPCS  2377
                P    P S
Sbjct  4497833  PGGASPAS  4497810


 Features in this part of subject sequence:
   4Fe-4S ferredoxin, iron-sulfur binding protein

 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 0/72 (0%)
 Frame = +3/-2

Query  2421     GSLHLLSAARD*KPPL*CCSLRHHTIHQKCPRDITSGRLLTGARPNPATLGA*SGRRGGR  2600
                G  H   AAR  +      + RHH    +       G     ARP PA LGA  GR   R
Sbjct  4790920  GRSHRRRAARRGRADAGGRAARHHRGGGRRGAGAAGGAEARAARPRPAALGAGRGRGRAR  4790741

Query  2601     HEACCSKPEERS  2636
                  A   +P  R+
Sbjct  4790740  SRAAARRPGGRA  4790705


 Features in this part of subject sequence:
   phenylalanyl-tRNA synthetase, beta subunit

 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
 Frame = +2/+3

Query  443      KARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSC  604
                + R   R R  +   RRRG+++R  P    R+ P     P  SR +   RR  C
Sbjct  2210556  RRRAARRPRWRAGPRRRRGSSSRRTPPAAARRRPRPRG*PRASRRWGAARRRRC  2210717


 Features in this part of subject sequence:
   peptide deformylase

 Score = 35.2 bits (96),  Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
 Frame = -3/+1

Query  568     SSRVRINRWILTKKEGRWATGCCTSTSTA  482
               SSR R+ RW       RW+  CC++T+++
Sbjct  839920  SSRFRLERWSTNMVPFRWSVSCCSATASS  840006


 Features in this part of subject sequence:
   SpoVG
   4-diphosphocytidyl-2C-methyl-D-erythritol kinase

 Score = 34.8 bits (95),  Expect = 7.1
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 0/57 (0%)
 Frame = -3/+2

Query  2320    GCAAKQGCEHGASPGGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVG  2150
               G  A  G  HG + G R       + +PA PPF + WI  +A  A+ R       VG
Sbjct  146018  GEDADLGDLHGDTLGCRRTVRARRTCTPAAPPFALPWIANAAPRAAPRPGKTPKTVG  146188


 Features in this part of subject sequence:
   lipoate-protein ligase B

 Score = 29.9 bits (80),  Expect = 7.1
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 0/48 (0%)
 Frame = +2/-1

Query  425      RLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPAR  568
                RL +  + R  H+ R +       G   RGP    LR  P   +H AR
Sbjct  2081918  RLPARVRPRPQHQPRPAGRAGGGGGGGVRGPGAGRLRAAPLRRAHRAR  2081775


 Features in this part of subject sequence:
   modification methylase, HemK family

 Score = 29.5 bits (79),  Expect = 1.2
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 0/43 (0%)
 Frame = -1/-2

Query  534     RRRRVGGPRAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPS  406
               R RR GGP    P+   P   AL   RV +    A R  H P+
Sbjct  427018  RARRGGGPAPGRPVGGAPRGRALRRDRVQSALRPAWRAGHAPA  426890


 Features in this part of subject sequence:
   DsbA oxidoreductase

 Score = 28.6 bits (76),  Expect = 3.2
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 0/20 (0%)
 Frame = -3/-3

Query  2461   GFQSLAAERRCKLPLSRKRW  2402
              G ++LAA  RC  P +R+RW
Sbjct  13227  GCRALAARPRCATPSARRRW  13168


 Features in this part of subject sequence:
   Methyltransferase type 11

 Score = 28.2 bits (75),  Expect = 8.6
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 0/55 (0%)
 Frame = -2/-1

Query  2576     GPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQATSLP  2412
                GP +RR RSG+      R  PRA       P A T  GR S    R +  +   P
Sbjct  1332170  GPSARRRRSGAPAS**PRRTPRARARRPRWPTART*AGRRSPAPGRARASSRRRP  1332006


 Features in this part of subject sequence:
   chalcone/stilbene synthase-like
   hypothetical protein

 Score = 27.9 bits (74),  Expect = 2.1
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 0/29 (0%)
 Frame = -3/-3

Query  2593    PRLPDQAPRVAGLGLAPVRRRPDVISRGH  2507
               P  PD   R A LG AP RR   V  R H
Sbjct  455427  PGDPDDLRRHAPLGAAPDRRGAGVAPRHH  455341


 Features in this part of subject sequence:
   ABC transporter, ATPase subunit

 Score = 27.2 bits (72),  Expect = 8.6
 Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 0/39 (0%)
 Frame = -1/+1

Query  510      RAAVPLRRLPDDDALLLWRVLALQLDARRTPHQPSPVPA  394
                RA   LRR P        R  A    ARR P +P P  A
Sbjct  3896272  RAVALLRRAPQGAHRPRARAGAAGAAARRAPRRPRPRRA  3896388


 Features in this part of subject sequence:
   chalcone/stilbene synthase-like

 Score = 26.9 bits (71),  Expect = 2.1
 Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 0/77 (0%)
 Frame = -3/-1

Query  2491    WCRKLQHHRGGFQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCA  2312
               W R  +  RG  +   A RR +    R+R S    AS  +   R+         PP   A
Sbjct  455303  WRRAARGRRGAPRPTRAGRRARTAPRRRRGSRGRGASARSAPARRGAGPARRPPPPAPSA  455124

Query  2311    AKQGCEHGASPGGRARS  2261
                +          GR R+
Sbjct  455123  RRCAPPSAGCSRGRGRA  455073


 Features in this part of subject sequence:
   modification methylase, HemK family

 Score = 26.2 bits (69),  Expect = 1.2
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 0/29 (0%)
 Frame = -1/-2

Query  432     ARRTPHQPSPVPA*CDSR*GQ*RAQASIR  346
               ARR P +P P PA    R G  RA+   R
Sbjct  426862  ARRRPRRPRPAPAHRGGRAGPARARRHAR  426776


 Features in this part of subject sequence:
   DsbA oxidoreductase

 Score = 25.6 bits (67),  Expect = 3.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 0/25 (0%)
 Frame = -1/-1

Query  2604   HDALLAFLIRPRESQG*VWLR*GGG  2530
              HD + A   RPR +QG    R GGG
Sbjct  13376  HDQVRAARARPRRAQGRARARGGGG  13302


 Features in this part of subject sequence:
   ABC transporter, ATPase subunit

 Score = 25.2 bits (66),  Expect = 8.6
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 0/28 (0%)
 Frame = -3/+3

Query  598      RTPQMSVNP*SSRVRINRWILTKKEGRW  515
                R P+ S +P S     +RW   +  GRW
Sbjct  3896139  RAPRTSCSPGSPGRSGSRWSPPRASGRW  3896222


 Features in this part of subject sequence:
   Methyltransferase type 11

 Score = 24.3 bits (63),  Expect = 8.6
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 0/38 (0%)
 Frame = -1/-2

Query  2322     AAVRPSKVVNTEHLLEGELAPIWLNRCRQHGLHSKCNG  2209
                AAV P      EH L  EL      R    GL   C+G
Sbjct  1331968  AAVPPEAAAEVEHPLVPELRQQRPERRPLAGLGQACDG  1331855


 Features in this part of subject sequence:
   primosomal protein N'

 Score = 23.6 bits (61),  Expect = 2.8
 Identities = 22/101 (21%), Positives = 33/101 (32%), Gaps = 0/101 (0%)
 Frame = -2/-3

Query  2726    SVSQTAGGYIELMTNS*IKVACRGSSSRL*ASFFRFTAAGFMTPSSPS*SGPESRRVRSG  2547
               +V   AGG   L      + A R ++ R  A   R +      P+      P +RR R  
Sbjct  845325  AVHAQAGGAAALGRGVLPRAARRAAAGRAAARPERASRGAGPGPARGGVRRPRARRGRVA  845146

Query  2546    SGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRKKVQA  2424
                      R   R  +     P       R   PR  + ++A
Sbjct  845145  RRPGPGRRAARRPRVPARARPHPGGGAARRVPPRPPRPLRA  845023


 Features in this part of subject sequence:
   acetylglutamate kinase

 Score = 22.9 bits (59),  Expect = 5.8
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 0/21 (0%)
 Frame = -3/+2

Query  2593    PRLPDQAPRVAGLGLAPVRRR  2531
               PR P +A   AG G+  +RRR
Sbjct  201767  PRRPVRAALRAGAGVPGLRRR  201829


 Features in this part of subject sequence:
   lipoate-protein ligase B

 Score = 22.9 bits (59),  Expect = 7.1
 Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 0/42 (0%)
 Frame = +2/-1

Query  281      HAQGKKMQRSRRSA*DPRNRKNLMLA*ALY*PHRESHHAGTG  406
                H  G    R R  A  P  R    L  A   PHR    AG G
Sbjct  2082098  HHLGGPGARRRAGAPAPPQRGARRLLAAGDRPHRAGRVAGAG  2081973


 Features in this part of subject sequence:
   primosomal protein N'

 Score = 22.9 bits (59),  Expect = 2.8
 Identities = 16/62 (25%), Positives = 21/62 (33%), Gaps = 0/62 (0%)
 Frame = -3/-3

Query  2311    AKQGCEHGASPGGRARSDMVESLSPARPPFQM*WIVPSALSASSREKDRQIHVGRFLEPD  2132
               A  G   GA    R R D+    +P R        VP+     +R   R+   G      
Sbjct  844935  AHPGAGRGAGGDRRGRRDVPGVPAPRRHRLGQDRGVPAGHRPGARRGPRRAGAGPRDRAH  844756

Query  2131    PA  2126
               PA
Sbjct  844755  PA  844750


 Features in this part of subject sequence:
   acetylglutamate kinase

 Score = 22.6 bits (58),  Expect = 5.8
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 0/33 (0%)
 Frame = -3/+3

Query  2671    RLPAGGVQVGFRLLSSGLLQQAS*RPPRLPDQA  2573
               RL A GV       +SG   QA+ RPPR+   A
Sbjct  201609  RLLANGVMPVGLHGASGHAVQATRRPPRVMQGA  201707


 Features in this part of subject sequence:
   primosomal protein N'

 Score = 22.6 bits (58),  Expect = 2.8
 Identities = 7/29 (24%), Positives = 16/29 (55%), Gaps = 0/29 (0%)
 Frame = -2/-2

Query  2081    SSASCLSIYIGGEFSFKSSTARAHRFWKC  1995
               S ++C +   G  ++  + ++R  R W+C
Sbjct  844666  SGSACAAARRGSAWASGAPSSRRCRTWRC  844580


 Features in this part of subject sequence:
   acetylglutamate kinase

 Score = 22.3 bits (57),  Expect = 5.8
 Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 0/29 (0%)
 Frame = -3/+1

Query  2410    KRWSLLTPASE*TRNLRKWR*SILNQVPP  2324
               + W+  TPA   T    +WR S   +  P
Sbjct  201808  RAWAATTPARRSTSTATRWRASWRARSAP  201894


>gi|77386383|gb|CP000143.1|  Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
Length=3188609

 Features in this part of subject sequence:
   Flagellar FliF M-ring protein

 Score = 40.1 bits (111),  Expect = 0.67
 Identities = 34/125 (27%), Positives = 45/125 (36%), Gaps = 0/125 (0%)
 Frame = +2/-3

Query  200      AGCWHRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKNLMLA*ALY*PH  379
                AG     R     P +  APS       A      + RR +  PR  +    A A     
Sbjct  1760352  AGGRSAARPDRPSPATGAAPSGRPPSHPAAPCPAPKRRRGSRWPRPARRRACAPARSGER  1760173

Query  380      RESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSH  559
                R    AG+  G   VR A + +AR   R    S+   R    A   P+  + + PS D  
Sbjct  1760172  RSPAAAGSRAGRPSVRAAPDARARPRRRKSR*STARDRAPAPAGAAPSRPISRCPSADRS  1759993

Query  560      PARSR  574
                 A SR
Sbjct  1759992  EAHSR  1759978


 Features in this part of subject sequence:
   Pyruvate phosphate dikinase

 Score = 37.1 bits (102),  Expect = 1.8
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 0/60 (0%)
 Frame = +2/+3

Query  419     GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRS  598
               G R A   + R  HR R    G+R RG  AR     LL Q P +    AR R     R +
Sbjct  457359  GARRARLPRGRPHHRGRHGGRGARGRGGHARARARQLLPQAPLLGRRDARHRRARQCRHA  457538


 Features in this part of subject sequence:
   Putative regulatory protein, GntR family

 Score = 36.5 bits (100),  Expect = 7.6
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 0/54 (0%)
 Frame = -2/+1

Query  2597    PSSPS*SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRRRK  2436
               PS+ S +    RR R+GSG  A  R  PRA   + +   A  + GR + PR+ K
Sbjct  203704  PSAGSAASRSGRRARTGSGTRAPWRPAPRAAARDRIRGGACRAAGRPAAPRQGK  203865


 Features in this part of subject sequence:
   putative flagellar basal body rod protein

 Score = 34.5 bits (94),  Expect = 1.8
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 0/43 (0%)
 Frame = +3/+3

Query  2511     PRDITSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSL  2639
                PR  ++ R   GAR +P    A  GR  G     C +P ER L
Sbjct  3098928  PRPRSACRPRAGARGDPWAARARRGRWAGHRPTACRRPRERPL  3099056


 Features in this part of subject sequence:
   ABC alpha-glucoside transporter, inner membrane subunit AglG

 Score = 32.8 bits (89),  Expect = 7.6
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 0/31 (0%)
 Frame = -3/+2

Query  2329     PPCGCAAKQGCEHGASPGGRARSDMVESLSP  2237
                PPC CA  +    G  P GRARS      SP
Sbjct  1539818  PPCSCATGRSRAAGRRPNGRARSRGSPCRSP  1539910


>gi|68342549|gb|CP000076.1|  Pseudomonas fluorescens Pf-5, complete genome
Length=7074893

 Features in this part of subject sequence:
   bacteriophytochrome histidine kinase

 Score = 40.1 bits (111),  Expect = 0.67
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 0/57 (0%)
 Frame = +2/-3

Query  425      RLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRR  595
                R  + C +R+  R+R+ S   RRR  AA+  P L L + P+I +    + V    RR
Sbjct  5957352  RARTACCSRSTWRARSCSRAERRRSLAAKRSPWLHLVEIPAISTFQISNEVRGRRRR  5957182


 Features in this part of subject sequence:
   hypothetical protein

 Score = 38.5 bits (106),  Expect = 2.1
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 0/45 (0%)
 Frame = +2/+2

Query  431      ASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPA  565
                A  C+ART     A   G RRR TA R P     RQ P++++ PA
Sbjct  5365322  AGYCRARTRD*PTARPPGHRRRRTADRPPNAGQWRQGPTLEARPA  5365456


 Features in this part of subject sequence:
   long-chain fatty acid--CoA ligase

 Score = 27.6 bits (73),  Expect = 2.1
 Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 0/62 (0%)
 Frame = +2/+1

Query  398      GTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRV  577
                G G  W  V L     A    R  A  +G+R RG     P  L    Y  +     R RV
Sbjct  3489994  GPGLLWLSVELCRAGPAVRPVRRLARRAGNRPRGPGGGVPAQLPAIAYRLLGHSQVRRRV  3490173

Query  578      YA  583
                 A
Sbjct  3490174  RA  3490179


 Features in this part of subject sequence:
   long-chain fatty acid--CoA ligase

 Score = 27.2 bits (72),  Expect = 2.1
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 0/73 (0%)
 Frame = +1/+1

Query  166      PCLTNSPGSNLSWVLA*RSNVRHFPFVEVSSICSFSLMTRPGKENAAK*ALRIGSA*PKK  345
                P +   PG  L W   *+   RH     +S+  S     R  +  AA  A+  G A P +
Sbjct  3489775  PSVLWCPGRCLRWPCR*QQFRRHHGPCGLSAAPSRPAAGRLARRRAAYPAVPPGPAAPYR  3489954

Query  346      PDACLSPLLTSSR  384
                  A L  + +  R
Sbjct  3489955  IPAGLGAVASQCR  3489993


>gi|78165794|gb|CP000096.1|  Pelodictyon luteolum DSM 273, complete genome
Length=2364842

 Features in this part of subject sequence:
   Exodeoxyribonuclease V, RecC subunit

 Score = 34.2 bits (93),  Expect = 0.68
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 0/37 (0%)
 Frame = -3/-3

Query  2329     PPCGCAAKQGCEHGASPGGRARSDMVESLSPARPPFQ  2219
                PPCG   ++GC  G + G R R+      +P R  F+
Sbjct  1126767  PPCGGRWQRGCRDGTAAGRRCRTARFVGGTPHREAFR  1126657


 Features in this part of subject sequence:
   Exodeoxyribonuclease V, RecC subunit

 Score = 22.6 bits (58),  Expect = 0.68
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 0/16 (0%)
 Frame = -3/-1

Query  2479     LQHHRGGFQSLAAERR  2432
                LQHH G   +  AERR
Sbjct  1126934  LQHHVGEVAAYPAERR  1126887


>gi|47118316|dbj|BA000040.2|  Bradyrhizobium japonicum USDA 110 DNA, complete genome
Length=9105828

 Features in this part of subject sequence:
   preprotein translocase SecA subunit

 Score = 37.1 bits (102),  Expect = 5.3
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
 Frame = +2/+2

Query  2189    RKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRC  2287
               R   R  P    WRPC R+R +  G ++P RRC
Sbjct  199346  RNASRRGPTARPWRPCARRRGSRCG*ATPRRRC  199444


 Features in this part of subject sequence:
   bll2849

 Score = 33.5 bits (91),  Expect = 0.72
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 0/60 (0%)
 Frame = -3/-3

Query  2503     W*IVWCRKLQHHRGGFQSLAAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPP  2324
                W  +  R   HHR   +  +  RR   P + +R  L + A    RN+R W       +PP
Sbjct  3133810  WRHIPRRTSPHHRRARRPTSLHRRSGSPRTWQRRGLNSIARRQRRNVRPWHRGRRRILPP  3133631


 Features in this part of subject sequence:
   major facilitator superfamily transporter
   arsenical pump membrane protein

 Score = 31.2 bits (84),  Expect = 1.1
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 0/61 (0%)
 Frame = -3/+1

Query  2446     AAERRCKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRA  2267
                A+ RRC+  L    WS+   A   +R+ R  R +  + + PC     + C        R 
Sbjct  5822695  ASARRCRRRLRASSWSVRAIARRSSRSARSLRSARSSALSPCPRRGMEPCRRRGRQRRRH  5822874

Query  2266     R  2264
                R
Sbjct  5822875  R  5822877


 Features in this part of subject sequence:
   bll0556
   bll0557

 Score = 29.2 bits (78),  Expect = 4.4
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 0/38 (0%)
 Frame = +2/-3

Query  425     RLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQ  538
               R+AS+  +RT H    S  G RR     R PP + LR 
Sbjct  596521  RMASSRPSRTAHPCSESRVGDRRSPGRWRDPP*IELRH  596408


 Features in this part of subject sequence:
   GMP synthase

 Score = 26.9 bits (71),  Expect = 5.3
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 0/62 (0%)
 Frame = -2/+2

Query  2483    QATTS*GRFSVPRRRKKVQATSLP*TLVTFNSSK*MNKELAKMAMKHSKSGSSVRLCGQA  2304
               Q   S GR  +PR +     T+LP  +++  ++    + L      H++  S  +  G  
Sbjct  593084  QGPFSSGRAPIPRHQTCPSGTTLPFQMLSVQTASIAKRWLTSCEFAHTRHRSGKQAPGHD  593263

Query  2303    RL  2298
               RL
Sbjct  593264  RL  593269


 Features in this part of subject sequence:
   GMP synthase

 Score = 26.2 bits (69),  Expect = 5.3
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 0/56 (0%)
 Frame = -2/+1

Query  2669    VACRGSSSRL*ASFFRFTAAGFMTPSSPS*SGPESRRVRSGSGEEAAGRDIPRAFL  2502
               V+  GS  R      R+ +A    P+ P       R +R+G+       D PRA L
Sbjct  592930  VSGSGSPKRGRRMSRRWPSARSALPTRPGVEDSWCRTIRTGNRASGRAADAPRALL  593097


 Features in this part of subject sequence:
   major facilitator superfamily transporter

 Score = 24.6 bits (64),  Expect = 1.1
 Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 0/46 (0%)
 Frame = -2/+1

Query  2579     SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVPRR  2442
                SG  +    + S   ++GR  P     +C  P  +TS    S P R
Sbjct  5822557  SGWSACSFSTASAPASSGRSSPSLSPTSCATPDVSTSRRARSSPPR  5822694


 Features in this part of subject sequence:
   bll0557

 Score = 24.3 bits (63),  Expect = 4.4
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 0/23 (0%)
 Frame = +1/-3

Query  364     PLLTSSRVTSCWYGGRLVRSAPC  432
               P+  S+RV +C    RL +  PC
Sbjct  596653  PICRSARVRACASARRLRKPNPC  596585


 Features in this part of subject sequence:
   bll2849

 Score = 22.9 bits (59),  Expect = 0.72
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 0/35 (0%)
 Frame = -3/-3

Query  2632     LSSGLLQQAS*RPPRLPDQAPRVAGLGLAPVRRRP  2528
                L S   ++AS RPPR   +        + P RRRP
Sbjct  3134020  LVSRCWRRASARPPRDSARDTEEVDHRVRPQRRRP  3133916


>gi|83652219|gb|CP000086.1|  Burkholderia thailandensis E264 chromosome I, complete sequence
Length=3809201

 Features in this part of subject sequence:
   exodeoxyribonuclease V, beta subunit

 Score = 39.8 bits (110),  Expect = 0.84
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 0/57 (0%)
 Frame = +2/+3

Query  431      ASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSS  601
                A  C+     R RAS     RR +AAR PP +  R+  +  +  AR R  A  RR S
Sbjct  3273033  APQCRTPRAVRRRASPHARARRASAARSPPRMHARRAAAHRAWSARRRRRAASRRGS  3273203


 Features in this part of subject sequence:
   thiamine-monophosphate kinase

 Score = 37.1 bits (102),  Expect = 5.3
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 0/67 (0%)
 Frame = +2/-1

Query  422      VRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSS  601
                VR  +  + RT  R R     +RRR    R  P  + R        PAR+RV A  RR+ 
Sbjct  1333391  VRRGAASRRRTRRRRRLGIRHARRRARRPRRDPRRMARGRARGGRVPARARVAAAARRAR  1333212

Query  602      CV*LAHR  622
                     HR
Sbjct  1333211  RRARGHR  1333191


 Features in this part of subject sequence:
   histidine ammonia-lyase

 Score = 29.2 bits (78),  Expect = 1.2
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
 Frame = +3/+1

Query  618      IAACHILHFELEKERTQVVFSHVNKVGNRLLVPITRSIQTI  740
                +A+ HI H +LE  +  +V SH   VG  +  P+ R +  +
Sbjct  2043727  LASTHIPHDQLELLQRNLVLSHAVGVGEPMARPVVRLLMAL  2043849


 Features in this part of subject sequence:
   sensor histidine kinase
   transcriptional regulator, LysR family

 Score = 28.9 bits (77),  Expect = 4.0
 Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 0/86 (0%)
 Frame = +2/+1

Query  212     HRGRMSDTFPLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKNLMLA*ALY*PHRESH  391
               HRGR +     +      H A  HA+ ++     R A D R  +    A A   PH    
Sbjct  308812  HRGRRARVSVRADDVSHRHDARPHAEDRRRSGCARRARDGRGARERRQARARTRPHAHPA  308991

Query  392     HAGTGEGW*GVRLASNCKARTLHRSR  469
               H+         R  S  + R   R+R
Sbjct  308992  HSRGDHQRTDRRRRSVPRGRHRGRTR  309069


 Features in this part of subject sequence:
   histidine ammonia-lyase

 Score = 26.6 bits (70),  Expect = 1.2
 Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 0/47 (0%)
 Frame = +2/+2

Query  431      ASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARS  571
                A  C++R++ R+   S+G RRR   +    +       + D+  AR+
Sbjct  2043602  ARTCRSRSIPRASPRSTGVRRRSPTSPRRASRRTASTRASDASRART  2043742


 Features in this part of subject sequence:
   sensor histidine kinase
   transcriptional regulator, LysR family

 Score = 24.9 bits (65),  Expect = 4.0
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 0/60 (0%)
 Frame = +2/+1

Query  443     KARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*LAHR  622
               +AR    + A      R G  +       +R++ +  +H AR+R YA   R +    A R
Sbjct  309163  RARRDRHAVAPRQSHARGGRTSDERGEGRMRRHRARSAHAARARAYAARARGAACGHARR  309342


>gi|17427008|emb|AL646057.1|  Ralstonia solanacearum GMI1000 chromosome, complete sequence; 
segment 1/19
Length=215050

 Features in this part of subject sequence:
   PROBABLE TWO COMPONENT SENSOR HISTIDINE KINASE TRANSCRIPT...

 Score = 39.8 bits (110),  Expect = 0.84
 Identities = 26/87 (29%), Positives = 28/87 (32%), Gaps = 0/87 (0%)
 Frame = +2/+3

Query  374    PHRESHHAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSID  553
              P   +H AG   G    R      A   HRS       R RG A R P     R      
Sbjct  89370  PRLCAHAAGRAAGPRSERAVYRGAAPVRHRSPGPERSRRHRGQAGRRPAAHQGRPDAVAA  89549

Query  554    SHPARSRVYAHLRRSSCV*LAHRCLSH  634
               HP  +   A  RR      A RC  H
Sbjct  89550  GHPQPAAERAGRRRRQRSGRAPRCACH  89630


>gi|1419202|emb|X98692.1|RSFLIFGEN  R.sphaeroides fliF gene
Length=1727

 Score = 39.8 bits (110),  Expect = 0.84
 Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 0/112 (0%)
 Frame = +2/-3

Query  239  PLSKLAPSAHSA**HAQGKKMQRSRRSA*DPRNRKNLMLA*ALY*PHRESHHAGTGEGW*  418
            P +  APS       A      R RR +  PR  +    A A     R    AG+  G  
Sbjct  723  PATGAAPSGRPPSHPAAPCPAPRRRRGSRWPRPARRRACAPARSGERRSPAAAGSRAGRP  544

Query  419  GVRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSR  574
             VR A + +AR   R    S+   R    A   P+  + + PS D   A SR
Sbjct  543  SVRAAPDARARPRRRKSR*STARDRAPAPAGAAPSRPISRCPSADRSEAHSR  388


>gi|77389406|gb|CP000144.1|  Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
Length=943016

 Features in this part of subject sequence:
   pH adaptation potassium efflux system,  phaD subunit

 Score = 36.8 bits (101),  Expect = 0.85
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
 Frame = +2/-3

Query  2180    RRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRR  2284
               R CR+C  ++     WRPCW +R +   ++ PS R
Sbjct  834057  RACRRCRASSARSRCWRPCWPRRASIRSSAGPSCR  833953


 Features in this part of subject sequence:
   QoxB, Quinol oxidase subunit II

 Score = 34.5 bits (94),  Expect = 0.85
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 0/48 (0%)
 Frame = +3/-1

Query  2499    HQKCPRDITSGRLLTGARPNPATLGA*SGRRGGRHEACCSKPEERSLK  2642
               H   P     GR     R +P  LGA +GR+ GRH   C    +R  +
Sbjct  142160  HPPYPGRPAGGRADHQRRRDPQFLGAAAGRQDGRHPGPCEPAADRGAR  142017


>gi|66801982|gb|DQ010751.1|  Unidentified bacterium clone 7g55 membrane bound nitrate reductase 
(narG) gene, partial cds
Length=653

 Score = 39.5 bits (109),  Expect = 1.1
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 0/68 (0%)
 Frame = +2/+2

Query  434  SNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSSCV*L  613
            + C+ R       S S SRRR  A+    T L R  P+    PAR+     + R++C   
Sbjct  230  AGCRQRRSSNKTRSISPSRRRRPASSPRTTWLRRLSPANCRWPARTPTIPTIGRATCSCG  409

Query  614  AHRCLSHP  637
            A  CL+ P
Sbjct  410  APTCLARP  433


>gi|37508091|dbj|BA000045.2|  Gloeobacter violaceus PCC 7421 DNA, complete genome
Length=4659019

 Features in this part of subject sequence:
   gll4223

 Score = 39.5 bits (109),  Expect = 1.1
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 0/73 (0%)
 Frame = +2/-1

Query  422      VRLASNCKARTLHRSRASSSGSRRRGTAARGPPTLLLRQYPSIDSHPARSRVYAHLRRSS  601
                V   ++C++R+  R     +   RR  A        L + P  D HPARSR+    RR  
Sbjct  4425148  VSRPADCRSRSARRPGHRRADHHRRAQARGHLQRSGLARSPGSDPHPARSRLRVDPRRVP  4424969

Query  602      CV*LAHRCLSHPP  640
                    A R   +PP
Sbjct  4424968  GGREAARTAGYPP  4424930


 Features in this part of subject sequence:
   NADH dehydrogenase subunit J

 Score = 36.8 bits (101),  Expect = 6.6
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 0/45 (0%)
 Frame = -3/-2

Query  2581     DQAPRVAGLGLAPVRRRPDVISRGHFW*IVWCRKLQHHRGGFQSL  2447
                D A  V GL L PVRR PD + RGH       + L+ H   F S+
Sbjct  2539260  DDAVHVVGLALLPVRRLPDPVDRGHARVSTVEKDLEAHLRRFVSV  2539126


>gi|8572673|gb|AF242881.1|AF242881  Agrobacterium tumefaciens octopine-type Ti plasmid, complete 
sequence
Length=194140

 Score = 39.5 bits (109),  Expect = 1.1
 Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 0/73 (0%)
 Frame = -2/+2

Query  515   GHGLLYLYVDCPTMMLCFYGGSLPYNWMQGALLTNLPPYQHDVTLDEVNRGLRQASGFFG  336
             G   LY+Y+D     LC     L  N   G L T L PY    T  +V   L+  SG  G
Sbjct  9248  GGEFLYIYLDKENYRLCRQRMVLVSNASDGLLATTLEPYSDGYTFRQVRAQLQALSGDGG  9427

Query  335   YADPMRSAYFAAF  297
               +  ++ Y +++
Sbjct  9428  RINYSKNEYSSSY  9466


 Score = 37.8 bits (104),  Expect = 3.3
 Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 0/116 (0%)
 Frame = +1/+1

Query  2053   IYILKQLAELLKNKVCYHPPMFVSQPDLARENDQHVFVYLSREKMQKVLKEQSITFGMEA  2232
              + I  +  E      C H P F S   +  + D   F   S E  Q V     +      
Sbjct  17113  LMISDENLECFSEVPCLHGPDFDSLDVVLPDYDLLYFYGTSHEVQQFVECGNFLCTHASR  17292

Query  2233   VLATTIQPYRSELALQEMLRVHNLAWPHSRTEEPDLECFIAIFASSLFIHLLELKV  2400
               +A T  PY   +  Q +   +N+  P SR    D+  F A   S  F+  +   V
Sbjct  17293  FVACTESPYTEGVTAQTIRNWYNMISPCSRLSLNDVGAFFAFLPSVSFLSTVHTVV  17460


>gi|76155076|gb|DQ187948.1|  Pseudomonas putida strain IFO12996 esterase gene, complete cds
Length=831

 Score = 31.9 bits (86),  Expect = 1.2
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 0/47 (0%)
 Frame = +2/-3

Query  2432  PSFCGEGLKTAPMML*LAAPHNSPKMPSGYHVRPPPHRSQT*PCDSR  2572
             P   G G  +AP+    ++  ++ +       RPPPHR +  PC  R
Sbjct  343   PCLQGAGPCSAPLHRHRSSGRHARRPGCPGERRPPPHRRRNGPCRGR  203


 Score = 25.9 bits (68),  Expect = 1.2
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 0/41 (0%)
 Frame = +2/-3

Query  392  HAGTGEGW*GVRLASNCKARTLHRSRASSSGSRRRGTAARG  514
            H     GW      S CK+ T H + AS +  R   TA  G
Sbjct  802  H*SHRHGWSACHAGSLCKSSTRHWAAASPTALRSSHTARSG  680


 Score = 22.6 bits (58),  Expect = 1.2
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 0/34 (0%)
 Frame = +2/-3

Query  2225  WRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAAR  2326
             WRP    R   I AS    R S  +  + R +AR
Sbjct  454   WRPGPGSRRTLIWASRRDYRGSAPSVAVRRRSAR  353


>gi|15160354|gb|AE008377.1|  Agrobacterium tumefaciens str. C58 linear chromosome, section 
181 of 187 of the complete sequence
Length=11457

 Score = 34.2 bits (93),  Expect = 1.3
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = +1/-3

Query  337   PKKPDACLSPLLTSSRVTSCWYG  405
             P +P A LSPLLT SR   CW G
Sbjct  5695  PARPSALLSPLLTRSRQGPCWRG  5627


 Score = 22.3 bits (57),  Expect = 1.3
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 0/33 (0%)
 Frame = +2/-3

Query  479   SGSRRRGTAARGPPTLLLRQYPSIDSHPARSRV  577
             S  +R G +AR  P +    +PS+    ARS V
Sbjct  5539  SPPQRVGFSARWMPLVNSSSWPSVAPQWARSLV  5441


>gi|17741414|gb|AE009236.1|  Agrobacterium tumefaciens str. C58 linear chromosome, section 
6 of 187 of the complete sequence
Length=10640

 Score = 34.2 bits (93),  Expect = 1.3
 Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 0/23 (0%)
 Frame = +1/+1

Query  337   PKKPDACLSPLLTSSRVTSCWYG  405
             P +P A LSPLLT SR   CW G
Sbjct  9232  PARPSALLSPLLTRSRQGPCWRG  9300


 Score = 22.3 bits (57),  Expect = 1.3
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 0/33 (0%)
 Frame = +2/+1

Query  479   SGSRRRGTAARGPPTLLLRQYPSIDSHPARSRV  577
             S  +R G +AR  P +    +PS+    ARS V
Sbjct  9388  SPPQRVGFSARWMPLVNSSSWPSVAPQWARSLV  9486


>gi|86565586|gb|CP000249.1|  Frankia sp. CcI3, complete genome
Length=5433628

 Features in this part of subject sequence:
   hypothetical protein

 Score = 31.2 bits (84),  Expect = 1.4
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 0/68 (0%)
 Frame = -3/+1

Query  2431     CKLPLSRKRWSLLTPASE*TRNLRKWR*SILNQVPPCGCAAKQGCEHGASPGGRARSDMV  2252
                C  P +R+      PA    R L + R +   + PP G  + +       PG   R    
Sbjct  4048474  CAAPATRRHRPAAGPARRAERGLGRPRRAAAARTPPAGRRSPEPSVRSEPPGRHRRR*SG  4048653

Query  2251     ESLSPARP  2228
                   +P RP
Sbjct  4048654  PDRAPRRP  4048677


 Features in this part of subject sequence:
   translation elongation factor Tu

 Score = 27.6 bits (73),  Expect = 8.5
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 0/27 (0%)
 Frame = -3/+1

Query  2404    WSLLTPASE*TRNLRKWR*SILNQVPP  2324
               WS +  ++E +R+ R WR S+ ++ PP
Sbjct  676504  WSPVASSAESSRSTRPWRSSVSSRRPP  676584


 Features in this part of subject sequence:
   translation elongation factor Tu

 Score = 24.9 bits (65),  Expect = 8.5
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 0/44 (0%)
 Frame = -2/+2

Query  2579    SGPESRRVRSGSGEEAAGRDIPRAFLVNCVVPQATTS*GRFSVP  2448
               SG    R +   G +  GR  PRA      V     +* R +VP
Sbjct  676328  SGRPGLRAQGAGGRQGVGRQAPRAHGGGRRVDPRAAA*HRPAVP  676459


 Features in this part of subject sequence:
   hypothetical protein

 Score = 24.3 bits (63),  Expect = 1.4
 Identities = 9/18 (50%), Positives = 13/18 (72%), Gaps = 0/18 (0%)
 Frame = -2/+2

Query  2564     RRVRSGSGEEAAGRDIPR  2511
                ++VR G GE+  GR +PR
Sbjct  4048403  QQVREGRGEQPPGRALPR  4048456


>gi|83423383|emb|CT005238.2|  Methylocapsa acidiphila B2, overlapping BAC clones, complete 
sequence
Length=100887

 Score = 34.5 bits (94),  Expect = 1.6
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 0/58 (0%)
 Frame = +2/-1

Query  2156   MYLSIFLARRCRKC*RNNPLHLEWRPCWRQRFNHIGASSPSRRCSVFTTLLGRTAARR  2329
              M+L+I  ARR +   R  P     RP WR+RF     S P  R S  T      + RR
Sbjct  53874  MWLAIQPARRAKSSKRAIPPGPRSRPSWRRRFMISTCSPPI*RTSRTTRPASSCSRRR  53701


 Score = 32.8 bits (89),  Expect = 1.6
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 0/60 (0%)
 Frame = +2/-1

Query  95     TQLLLTSNSSAHRLTISRLQTCTRHASPTHQVRT*AGCWHRGRMSDTFPLSKLAPSAHSA  274
              T+L LTS + A     +    C R +S T+  R       R R + + P+S+L P A  A
Sbjct  75462  TRLSLTSAAIAKNRAKAAGLFCARDSSKTYPTRATGSLAPRRRSTSSMPMSRLKPRASRA  75283


>gi|21106752|gb|AE011693.1|  Xanthomonas axonopodis pv. citri str. 306,  section 71 of 469 
of the complete genome
Length=11505

 Score = 38.8 bits (107),  Expect = 1.7
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 0/54 (0%)
 Frame = -3/-3

Query  583    SVNP*SSRVRINRWILTKKEGRWATGCCTSTSTARR*CSASMEGPCLTIGCKAH  422
              S  P ++R R  R  +  + G+W  G C+  +TA R C+ ++  P     C  H
Sbjct  11008  SAGPAAARSRARRTAIGHRCGKWHPGSCSRPTTANRRCADAVPRPRPDSACGRH  10847


>gi|78192483|gb|CP000148.1|  Geobacter metallireducens GS-15, complete genome
Length=3997420

 Features in this part of subject sequence:
   Excinuclease ABC, A subunit

 Score = 24.6 bits (64),  Expect = 1.7
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 0/33 (0%)
 Frame = +3/+3

Query  2223     NGGRAGDNDSTISERARPPGDAPCSQPCLAAQP  2321
                +G RA  +  +   R  P G AP  +P  AA P
Sbjct  2930964  SGSRAPPSPGSRGGRGSPAGAAPPPRPGGAAAP  2931062


 Features in this part of subject sequence:
   Excinuclease ABC, A subunit

 Score = 22.9 bits (59),  Expect = 1.7
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 0/19 (0%)
 Frame = +2/+2

Query  2177     ARRCRKC*RNNPLHLEWRP  2233
                +R CRK     P+   WRP
Sbjct  2930792  SRSCRKTPITRPMSRGWRP  2930848


 Features in this part of subject sequence:
   Excinuclease ABC, A subunit

 Score = 22.6 bits (58),  Expect = 1.7
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 0/45 (0%)
 Frame = +1/+1

Query  2413     GREVACTFFLRRGTENRPYDVVACGTTQFTKNALGISRPAASSPE  2547
                GR+      LR   +   +D+V     Q T+N +G   P  +  E
Sbjct  2931049  GRQRQGAEELRAAVQGEEHDIVDGEAGQITQNLIGQLHPLGAKAE  2931183


>gi|84365597|dbj|AP008229.1|  Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
Length=4940217

 Features in this part of subject sequence:
   putative alternate sigma factor

 Score = 28.6 bits (76),  Expect = 5.8
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 0/24 (0%)
 Frame = -3/+3

Query  2575     APRVAGLGLAPVRRRPDVISRGHF  2504
                A R+AG+ LA V   PDVI R  F
Sbjct  1642017  ASRIAGVALAQVDLHPDVIVREEF  1642088





  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental 
samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Mar 14, 2006  9:13 PM
  Number of letters in database: 1,455,966,080
  Number of sequences in database:  415,319
Lambda     K      H
   0.229   0.0926    0.251 
Matrix: BLOSUM45
Number of Sequences: 415319
Number of Hits to DB: 2272259819
Number of extensions: 124150441
Number of successful extensions: 74805
Number of sequences better than 10: 10
Length of query: 2949
Length of database: 1455966080
Length adjustment: 91
Effective length of query: 2858
Effective length of database: 1455966080
Effective search space: 4161151056640
Effective search space used: 399194973324
T: 13
A: 40
X1: 22 (7.3 bits)
S2: 97 (35.5 bits)